Zfp51 (zinc finger protein 51) - Rat Genome Database

Name: Zfp51
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Zfp51 (zinc finger protein 51) Mus musculus

Analyze

Symbol:

Zfp51

Name:

zinc finger protein 51

RGD ID:

1619238

MGI Page

MGI

Description:

Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in several structures, including central nervous system; genitourinary system; liver; lung; and spleen. Orthologous to human ZNF761 (zinc finger protein 761).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

mszf92; zfec12; Zfp-5; Zfp-51; Zinc finger protein 118

RGD Orthologs

Rat

Alliance Genes

More Info

more info ...

Related Pseudogenes:

Gm18126 Gm7195

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	21,670,636 - 21,685,853 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	21,670,636 - 21,685,849 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	21,450,374 - 21,465,591 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	21,450,374 - 21,465,587 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	21,587,316 - 21,602,555 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	20,508,046 - 20,523,305 (+)	NCBI		MGSCv36	mm8
MGSCv36	17	21,155,066 - 21,170,288 (+)	NCBI		MGSCv36	mm8
Celera	7	146,134,596 - 146,149,819 (+)	NCBI		Celera
Cytogenetic Map	17	A3.2	NCBI
cM Map	17	11.4	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (EXP)

1,2-dimethylhydrazine (EXP)

3,4-methylenedioxymethamphetamine (EXP)

aflatoxin B1 (ISO)

bisphenol A (ISO)

carbon nanotube (EXP)

clofibrate (EXP)

crocidolite asbestos (EXP)

dichloromethane (EXP)

epoxiconazole (EXP)

N-methyl-4-phenylpyridinium (ISO)

paracetamol (EXP)

perfluorooctane-1-sulfonic acid (EXP)

phenobarbital (EXP)

tetrachloromethane (EXP)

trichloroethene (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

nucleus (IBA)

Molecular Function

DNA-binding transcription activator activity, RNA polymerase II-specific (IBA)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:1680234	PMID:8043957	PMID:8812414	PMID:10349636	PMID:10384051	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:11544199	PMID:12466851	PMID:12477932
PMID:14610273	PMID:15618518	PMID:16141072	PMID:16141073	PMID:18287559	PMID:20059953	PMID:21873635

Genomics

Comparative Map Data

Zfp51
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	21,670,636 - 21,685,853 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	21,670,636 - 21,685,849 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	21,450,374 - 21,465,591 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	21,450,374 - 21,465,587 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	21,587,316 - 21,602,555 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	20,508,046 - 20,523,305 (+)	NCBI		MGSCv36	mm8
MGSCv36	17	21,155,066 - 21,170,288 (+)	NCBI		MGSCv36	mm8
Celera	7	146,134,596 - 146,149,819 (+)	NCBI		Celera
Cytogenetic Map	17	A3.2	NCBI
cM Map	17	11.4	NCBI

Zfp51
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	69,886,585 - 69,908,424 (+)	NCBI		GRCr8
mRatBN7.2	1	61,203,159 - 61,235,545 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	61,191,368 - 61,235,540 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	1	64,719,963 - 64,749,676 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	64,740,487 - 64,749,705 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	63,711,382 - 63,716,976 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Cytogenetic Map	1	q12	NCBI

Variants

Variants in Zfp51
731 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	14
Count of miRNA genes:	14
Interacting mature miRNAs:	14
Transcripts:	ENSMUST00000039577
Prediction methods:	Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357902	Obq19_m	obesity QTL 19 (mouse)			Not determined		17	1	25662076	Mouse
12910982	Pifs2_m	peptide-induced fatal syndrome 2 (mouse)					17	1	26189355	Mouse
1357743	Lith3_m	lithogenic gene 3 (mouse)			Not determined		17	1	26194456	Mouse
1301615	Cfld3_m	cystic fibrosis lung disease 3 (mouse)			Not determined		17	1	27081639	Mouse
1300613	Pcyts4_m	plasmacytoma susceptibility 4 (mouse)			Not determined		17	1	27081639	Mouse
1302100	Circp2_m	circadian photosensitivity 2 (mouse)			Not determined		17	1	29198453	Mouse
12910527	Nrq1a_m	noise-induced hearing loss resistant QTL 1a (mouse)					17	1	29198453	Mouse
12910528	Nrq1_m	noise-induced hearing loss resistant QTL 1 (mouse)					17	1	29198453	Mouse
13524851	Asrq8_m	acoustic startle response 8 (mouse)					17	1	31030170	Mouse
10412276	Leci2_m	leukocyte endothelial cell interactions 2 (mouse)			Not determined		17	3348175	37348299	Mouse
1357680	Idd23_m	insulin dependent diabetes susceptibility 23 (mouse)			Not determined		17	3974890	26401133	Mouse
1300890	Bhr3_m	bronchial hyperresponsiveness 3 (mouse)			Not determined		17	3974890	48866091	Mouse
1301327	Lmr7_m	leishmaniasis resistance 7 (mouse)			Not determined		17	4854752	27715939	Mouse
4141215	Mnic1_m	macronutrient intake, carbohydrate 1 (mouse)			Not determined			4854752	45670266	Mouse
1300706	Alan1_m	alloantigen response 1 (mouse)			Not determined		17	4854752	46469702	Mouse
1357789	Kdnw3_m	kidney weight 3 (mouse)			Not determined		17	4854752	47885665	Mouse
4141272	Tfv1_m	total food volume 1 (mouse)			Not determined			4854752	65637357	Mouse
10043949	Pbft7_m	percent body fat 7 (mouse)			Not determined		17	6893936	40893936	Mouse
4141608	Phl1_m	progressive hearing loss 1 (mouse)			Not determined		17	7875843	29487423	Mouse
1301935	Skull24_m	skull morphology 24 (mouse)			Not determined		17	8584914	42585149	Mouse
1300787	Cd8mts5_m	CD8 memory T cell subset 5 (mouse)			Not determined		17	8584914	42585149	Mouse
1301338	Lmr1_m	leishmaniasis resistance 1 (mouse)			Not determined		17	10081340	86996400	Mouse
1302028	Asbb3_m	autoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)			Not determined		17	10878119	44878219	Mouse
4142342	Lfnq4_m	lung function QTL 4 (mouse)			Not determined			11206484	39364059	Mouse
4141067	Hbnr2_m	Heligmosomoides bakeri nematode resistance 2 (mouse)			Not determined			11885971	45886119	Mouse
14747010	Mancz14_m	mandible centroid size 14 (mouse)					17	11998184	45998184	Mouse
4142507	Obrq13_m	obesity resistance QTL 13 (mouse)			Not determined			12198329	25076769	Mouse
4142150	Stheal11_m	soft tissue heal 11 (mouse)			Not determined		17	12286211	83361768	Mouse
12904946	Tammq8_m	tibialis anterior muscle mass QTL 8 (mouse)					17	12451787	46451787	Mouse
1558807	Ceat1_m	chronic experimental autoimmune thyroiditis 1 (mouse)			Not determined		17	12636682	26401133	Mouse
13524847	Asrq8a_m	acoustic startle response 8a (mouse)					17	12646961	46646961	Mouse
11081168	Tir7_m	trypanosome infection response 7 (mouse)					17	14123372	48123496	Mouse
1300995	Fembrs4_m	femur breaking strength 4 (mouse)			Not determined		17	15061652	49061760	Mouse
1300914	Pcir4_m	periosteal circumference 4 (mouse)			Not determined		17	15061652	49061760	Mouse
1302070	Tbbmd7_m	total body bone mineral density 7 (mouse)			Not determined		17	15061652	49061760	Mouse
1558886	Lgth9_m	body length 9 (mouse)			Not determined		17	15061652	49061760	Mouse
1302140	Wta4_m	weight adult 4 (mouse)			Not determined		17	16819721	50819843	Mouse
1302152	Skull25_m	skull morphology 25 (mouse)			Not determined		17	16819721	50819843	Mouse
1302038	Radpf1_m	radiation pulmonary fibrosis 1 (mouse)			Not determined		17	16835455	33819843	Mouse
10412083	Sm2_m	susceptibility to Schistosoma mansoni infection 2 (mouse)			Not determined		17	17029943	51030078	Mouse
13452396	Leusq3_m	leucocytosis susceptibility QTL 3 (mouse)					17	17462208	51462345	Mouse
13452399	Leusq6_m	leucocytosis susceptibility QTL 6 (mouse)					17	17462208	51462345	Mouse
10412214	Sxbq3_m	SGC/Knj cross B6 QTL 3 (mouse)			Not determined		17	17462208	51462345	Mouse
1300535	Char3_m	P. chabaudi malaria resistance QTL 3 (mouse)			Not determined		17	17462208	51462345	Mouse
1301840	Ssial4_m	susceptibility to sialadenitiss 4 (mouse)			Not determined		17	18175412	52178214	Mouse
1301331	Lbw1_m	lupus NZB x NZW 1 (mouse)			Not determined		17	18418357	52420983	Mouse
1301056	Pas2_m	pulmonary adenoma susceptibility 2 (mouse)			Not determined		17	18422141	52424327	Mouse
15039354	Nmrs36_m	NAFLD-associated magnetic resonance shift 36 (mouse)					17	19145025	53145025	Mouse

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001308323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_009558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_030249754	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK133677	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK154157	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK172556	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY510701	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC011183	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466649	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CK390565	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CT010433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	M74235	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X74855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000039577 ⟹ ENSMUSP00000045684

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	17	21,670,636 - 21,685,849 (+)	Ensembl
GRCm38.p6 Ensembl	17	21,450,374 - 21,465,587 (+)	Ensembl

RefSeq Acc Id:

NM_001308323 ⟹ NP_001295252

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	17	21,670,636 - 21,685,853 (+)	NCBI
GRCm38	17	21,450,374 - 21,465,591 (+)	NCBI

Sequence:

show sequence

AGAGGAGTGACGTGAGCGGAAGCTGGGAAACTAGGGCTCACTGATCACCCAGACCTGCTCACCT
GTGGAGCAGAGCAAAGAGCCCTGGAAGATGTAGATGGAGGAGACAGTCACTAAGGATCCAGCAT
CACAAGCTGGAGAGTCATTGTACCTGAAAGAGAAATTCAAAGAAGATAAACAGAAAGAAATGGC
TTATTCACCAGTAAACATGCCCCAGGGTCTGTTGACATTCAGGGATGTGGCTGTGGACTTCCCT
CAGGAGGAGTGGGAATGCCTGGACTCTGATCAGAGGGCTCTGTACATTGATGTGATGTTGGAGA
ATTACAGAAACCTGGTCTCTGTCGAGAACTACTGCATATGTGATACAGTCCATCAACATGTAAA
GACTGAAAAGGAGTCTTGTCAGGGTAATAAACTTGGTGAAATGCTTCATGAACCCTCCAACTGT
GCCCTTTATAATAGAAGTGACACTACAGAAGCCTCTAACAAATTCCGATGCTGTAACAACGAGG
ATGTCTCTGTTGACTCGTCAAATCAAAATAGATATAAAAGCACGCATACTGGAGAAGAACCTTG
TGAGTCTAAAGACTGTGAGAAATCTTTAACTTTGTGTTCTGACATTAGTCAGGATCAAAGACTC
TACAACGCAAAACAGCACAGACAGGAAGTATACGATGACTATTTCAGCTCTGCATACAGTCTCA
TGCAACCAACAGCCTACATTAAAGAGAAACCACACCAGTGTGGCAAATGTGGGAAATGCTTCAA
TACCTCCTCAAGCCTCACTGTCCATCACAGAATTCATACTAAAGAGAAACCCTACAAGTGCAGT
GTCTGTGACAAATCCTTTACCCAGTGCACACATCTTAAAATACATCAAAGACGTCATACTGGGG
AAAAACCTTACAAATGCAAAGAATGTGAAAAATCATTTGTTCAGTTGTCAGCACTTAAAAGTCA
TCAGAAATTGCATACTGGAGAGAAGCCTTACAAATGCAAGGAATGTGACAAATCCTTTGCCCAT
TATCCCAATTTCAGGACACATCAGAAAATCCATACTTCAGAGGAACATTGTAGTTGTCCAGAAT
GTGGCAGGGAATTTCACCAGCTTTCACACCTTAGAAAACATTACAGACTCCATACTGGAGAGAA
GCCTTACAAATGCAATGAGTGTGACAGATCCTTTACCCACTATGCATCATTAAGATGGCATCAG
AAAACTCATACTCCAGAGATACATTATGAATGCAAAGAATGTGGTAAGTCCTTTATTGAATTAT
CACATCTTAAAAGGCATTACAGAATCCACACTGGTGAAAAGCCTTATAAGTGTGAGATATGTGA
CAAGTCCTTTACTACGACCACAACTCTTAAAACACATCAGAAAATCCACACTGGAGAGAAACCT
TACAAATGTAGAGAATGTGACAAATCTTTTATTCATAGTTCACATCTTAGAAGACATCAGAATG
TTCATACTGGAGAGAGACCTTACAGATGTAAGGAATGTGACAAATCTTTTCATGAGAGCGCCAC
TCTTAGAGAACATGAGAAAAGTCATACTGGAGAGAAAACTTACAAATGTAGAGAATGTGACAAA
TCCTTTACCCAGCGTGCATATCTTAGAAATCATCATAACAGAGTTCATACTGGAGAGAGACCTT
ATGAATGTAAGGAATGTGGCAAATCTTTTACTACCTGCTCAACTCTTAGAATACATCAGACAAT
TCATACTGGAAAGAAACCCTACAAGTGTATAGAATGTGGTAAATCCTTTACCAATAATTCATAT
CTTAGAACACATCAGAAAGTTCATTCTGGAGAGAAACCTTACAGATGTAAGGAATGTGACAAAT
CTTTTACTAGCTGTTCAACTCTAAAAGCACATCAGAATATTCATACTGGAGAGAAACCTTACAA
ATGTATAGAATGTGACAAATCCTTTACCCAGGTCTCACATCTTAGAACACATCAGAGAGTTCAT
ACTGGAGAGAGACCTTTCAGATGTACAGAATGTGACAAATCTTTTATTAGGTCTTCTCACCTTA
GAGAACATCAGAAAATTCATAGTGGAGAGAAACCTTACAAATGCAGAGACTGTGACATATCATT
TAGCCAGATTTCAAATCTCAGAAGACATCAGAAACTTCATACTGGTGAGAAACCTTACAAATGT
ATGGAATGTGACAAGTCCTTTACTCATAACTCAAATTTTAGAACACATCAGAGAGTTCATACTG
GAGAGAAACCTTATAGATGTGCCGAATGTGACAAATCTTTTACTAGGTGCTCCTACCTTAGAGC
CCATCAGAAAATTCATACTGGAGAGAAACCTTACAAATGTATGGAATATGACAAACCCAATACC
CAGGACTCAAATCTTAAAAGACATCAAAGAGTTCATACTGGAGTGAAACATACCTTTTTAAATA
ATGTAACATAGTATTTATCCAGTATTCTATCTGCTTATAAGTCATAAGAATAAGAAACATGGGA
AATACTTTAATGAACTTTTAAATCTCATAAAATAATGCTAAAATAAAAATTTGCCTATTATGTC
AAAA

hide sequence

RefSeq Acc Id:

NM_009558 ⟹ NP_033584

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	17	21,670,636 - 21,685,853 (+)	NCBI
GRCm38	17	21,450,374 - 21,465,591 (+)	NCBI
MGSCv37	17	21,587,316 - 21,602,555 (+)	RGD
Celera	7	146,134,596 - 146,149,819 (+)	NCBI
cM Map	17		ENTREZGENE

Sequence:

show sequence

AGAGGAGTGACGTGAGCGGAAGCTGGGAAACTAGGTGAGTGAAGCCAGGGCTCACTGATCACCC
AGACCTGCTCACCTGTGGAGCAGAGCAAAGAGCCCTGGAAGATGTAGATGGAGGAGACAGTCAC
TAAGGATCCAGCATCACAAGCTGGAGAGTCATTGTACCTGAAAGAGAAATTCAAAGAAGATAAA
CAGAAAGAAATGGCTTATTCACCAGTAAACATGCCCCAGGGTCTGTTGACATTCAGGGATGTGG
CTGTGGACTTCCCTCAGGAGGAGTGGGAATGCCTGGACTCTGATCAGAGGGCTCTGTACATTGA
TGTGATGTTGGAGAATTACAGAAACCTGGTCTCTGTCGAGAACTACTGCATATGTGATACAGTC
CATCAACATGTAAAGACTGAAAAGGAGTCTTGTCAGGGTAATAAACTTGGTGAAATGCTTCATG
AACCCTCCAACTGTGCCCTTTATAATAGAAGTGACACTACAGAAGCCTCTAACAAATTCCGATG
CTGTAACAACGAGGATGTCTCTGTTGACTCGTCAAATCAAAATAGATATAAAAGCACGCATACT
GGAGAAGAACCTTGTGAGTCTAAAGACTGTGAGAAATCTTTAACTTTGTGTTCTGACATTAGTC
AGGATCAAAGACTCTACAACGCAAAACAGCACAGACAGGAAGTATACGATGACTATTTCAGCTC
TGCATACAGTCTCATGCAACCAACAGCCTACATTAAAGAGAAACCACACCAGTGTGGCAAATGT
GGGAAATGCTTCAATACCTCCTCAAGCCTCACTGTCCATCACAGAATTCATACTAAAGAGAAAC
CCTACAAGTGCAGTGTCTGTGACAAATCCTTTACCCAGTGCACACATCTTAAAATACATCAAAG
ACGTCATACTGGGGAAAAACCTTACAAATGCAAAGAATGTGAAAAATCATTTGTTCAGTTGTCA
GCACTTAAAAGTCATCAGAAATTGCATACTGGAGAGAAGCCTTACAAATGCAAGGAATGTGACA
AATCCTTTGCCCATTATCCCAATTTCAGGACACATCAGAAAATCCATACTTCAGAGGAACATTG
TAGTTGTCCAGAATGTGGCAGGGAATTTCACCAGCTTTCACACCTTAGAAAACATTACAGACTC
CATACTGGAGAGAAGCCTTACAAATGCAATGAGTGTGACAGATCCTTTACCCACTATGCATCAT
TAAGATGGCATCAGAAAACTCATACTCCAGAGATACATTATGAATGCAAAGAATGTGGTAAGTC
CTTTATTGAATTATCACATCTTAAAAGGCATTACAGAATCCACACTGGTGAAAAGCCTTATAAG
TGTGAGATATGTGACAAGTCCTTTACTACGACCACAACTCTTAAAACACATCAGAAAATCCACA
CTGGAGAGAAACCTTACAAATGTAGAGAATGTGACAAATCTTTTATTCATAGTTCACATCTTAG
AAGACATCAGAATGTTCATACTGGAGAGAGACCTTACAGATGTAAGGAATGTGACAAATCTTTT
CATGAGAGCGCCACTCTTAGAGAACATGAGAAAAGTCATACTGGAGAGAAAACTTACAAATGTA
GAGAATGTGACAAATCCTTTACCCAGCGTGCATATCTTAGAAATCATCATAACAGAGTTCATAC
TGGAGAGAGACCTTATGAATGTAAGGAATGTGGCAAATCTTTTACTACCTGCTCAACTCTTAGA
ATACATCAGACAATTCATACTGGAAAGAAACCCTACAAGTGTATAGAATGTGGTAAATCCTTTA
CCAATAATTCATATCTTAGAACACATCAGAAAGTTCATTCTGGAGAGAAACCTTACAGATGTAA
GGAATGTGACAAATCTTTTACTAGCTGTTCAACTCTAAAAGCACATCAGAATATTCATACTGGA
GAGAAACCTTACAAATGTATAGAATGTGACAAATCCTTTACCCAGGTCTCACATCTTAGAACAC
ATCAGAGAGTTCATACTGGAGAGAGACCTTTCAGATGTACAGAATGTGACAAATCTTTTATTAG
GTCTTCTCACCTTAGAGAACATCAGAAAATTCATAGTGGAGAGAAACCTTACAAATGCAGAGAC
TGTGACATATCATTTAGCCAGATTTCAAATCTCAGAAGACATCAGAAACTTCATACTGGTGAGA
AACCTTACAAATGTATGGAATGTGACAAGTCCTTTACTCATAACTCAAATTTTAGAACACATCA
GAGAGTTCATACTGGAGAGAAACCTTATAGATGTGCCGAATGTGACAAATCTTTTACTAGGTGC
TCCTACCTTAGAGCCCATCAGAAAATTCATACTGGAGAGAAACCTTACAAATGTATGGAATATG
ACAAACCCAATACCCAGGACTCAAATCTTAAAAGACATCAAAGAGTTCATACTGGAGTGAAACA
TACCTTTTTAAATAATGTAACATAGTATTTATCCAGTATTCTATCTGCTTATAAGTCATAAGAA
TAAGAAACATGGGAAATACTTTAATGAACTTTTAAATCTCATAAAATAATGCTAAAATAAAAAT
TTGCCTATTATGTCAAAA

hide sequence

RefSeq Acc Id:

XM_030249754 ⟹ XP_030105614

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	17	21,670,692 - 21,685,842 (+)	NCBI
GRCm38	17	21,450,430 - 21,465,580 (+)	NCBI

Sequence:

show sequence

AGAACCAAAGCCAAAAGTGTTAACGACCTGTTCACGTCCAGAGCTCACGGCCCTGCACCGTAGG
GAATCGCGTAGTGTAGACCTGGGATAGCAGAACGGGGAGGAATTTAGGGGAAGGTAAAACGCCG
GCCAGCCGTGTGCCGCGCGGGGCATCTTGGGAGAGTCAGCAGCACAGCAGCTGGAACCATAGCT
CAGAAACCTCCCAAGTCAAAGGAGCTACGGGGCTGGGAAGGGGCCGGAAGAGAGCAGGGCGTGA
TCAGTTTTTCTGGTGTTCATAAGGCTCACTGATCACCCAGACCTGCTCACCTGTGGAGCAGAGC
AAAGAGCCCTGGAAGATGTAGATGGAGGAGACAGTCACTAAGGATCCAGCATCACAAGCTGGAG
AGTCATTGTACCTGAAAGAGAAATTCAAAGAAGATAAACAGAAAGAAATGGCTTATTCACCAGT
AAACATGCCCCAGGGTCTGTTGACATTCAGGGATGTGGCTGTGGACTTCCCTCAGGAGGAGTGG
GAATGCCTGGACTCTGATCAGAGGGCTCTGTACATTGATGTGATGTTGGAGAATTACAGAAACC
TGGTCTCTGTCGAGAACTACTGCATATGTGATACAGTCCATCAACATGTAAAGACTGAAAAGGA
GTCTTGTCAGGGTAATAAACTTGGTGAAATGCTTCATGAACCCTCCAACTGTGCCCTTTATAAT
AGAAGTGACACTACAGAAGCCTCTAACAAATTCCGATGCTGTAACAACGAGGATGTCTCTGTTG
ACTCGTCAAATCAAAATAGATATAAAAGCACGCATACTGGAGAAGAACCTTGTGAGTCTAAAGA
CTGTGAGAAATCTTTAACTTTGTGTTCTGACATTAGTCAGGATCAAAGACTCTACAACGCAAAA
CAGCACAGACAGGAAGTATACGATGACTATTTCAGCTCTGCATACAGTCTCATGCAACCAACAG
CCTACATTAAAGAGAAACCACACCAGTGTGGCAAATGTGGGAAATGCTTCAATACCTCCTCAAG
CCTCACTGTCCATCACAGAATTCATACTAAAGAGAAACCCTACAAGTGCAGTGTCTGTGACAAA
TCCTTTACCCAGTGCACACATCTTAAAATACATCAAAGACGTCATACTGGGGAAAAACCTTACA
AATGCAAAGAATGTGAAAAATCATTTGTTCAGTTGTCAGCACTTAAAAGTCATCAGAAATTGCA
TACTGGAGAGAAGCCTTACAAATGCAAGGAATGTGACAAATCCTTTGCCCATTATCCCAATTTC
AGGACACATCAGAAAATCCATACTTCAGAGGAACATTGTAGTTGTCCAGAATGTGGCAGGGAAT
TTCACCAGCTTTCACACCTTAGAAAACATTACAGACTCCATACTGGAGAGAAGCCTTACAAATG
CAATGAGTGTGACAGATCCTTTACCCACTATGCATCATTAAGATGGCATCAGAAAACTCATACT
CCAGAGATACATTATGAATGCAAAGAATGTGGTAAGTCCTTTATTGAATTATCACATCTTAAAA
GGCATTACAGAATCCACACTGGTGAAAAGCCTTATAAGTGTGAGATATGTGACAAGTCCTTTAC
TACGACCACAACTCTTAAAACACATCAGAAAATCCACACTGGAGAGAAACCTTACAAATGTAGA
GAATGTGACAAATCTTTTATTCATAGTTCACATCTTAGAAGACATCAGAATGTTCATACTGGAG
AGAGACCTTACAGATGTAAGGAATGTGACAAATCTTTTCATGAGAGCGCCACTCTTAGAGAACA
TGAGAAAAGTCATACTGGAGAGAAAACTTACAAATGTAGAGAATGTGACAAATCCTTTACCCAG
CGTGCATATCTTAGAAATCATCATAACAGAGTTCATACTGGAGAGAGACCTTATGAATGTAAGG
AATGTGGCAAATCTTTTACTACCTGCTCAACTCTTAGAATACATCAGACAATTCATACTGGAAA
GAAACCCTACAAGTGTATAGAATGTGGTAAATCCTTTACCAATAATTCATATCTTAGAACACAT
CAGAAAGTTCATTCTGGAGAGAAACCTTACAGATGTAAGGAATGTGACAAATCTTTTACTAGCT
GTTCAACTCTAAAAGCACATCAGAATATTCATACTGGAGAGAAACCTTACAAATGTATAGAATG
TGACAAATCCTTTACCCAGGTCTCACATCTTAGAACACATCAGAGAGTTCATACTGGAGAGAGA
CCTTTCAGATGTACAGAATGTGACAAATCTTTTATTAGGTCTTCTCACCTTAGAGAACATCAGA
AAATTCATAGTGGAGAGAAACCTTACAAATGCAGAGACTGTGACATATCATTTAGCCAGATTTC
AAATCTCAGAAGACATCAGAAACTTCATACTGGTGAGAAACCTTACAAATGTATGGAATGTGAC
AAGTCCTTTACTCATAACTCAAATTTTAGAACACATCAGAGAGTTCATACTGGAGAGAAACCTT
ATAGATGTGCCGAATGTGACAAATCTTTTACTAGGTGCTCCTACCTTAGAGCCCATCAGAAAAT
TCATACTGGAGAGAAACCTTACAAATGTATGGAATATGACAAACCCAATACCCAGGACTCAAAT
CTTAAAAGACATCAAAGAGTTCATACTGGAGTGAAACATACCTTTTTAAATAATGTAACATAGT
ATTTATCCAGTATTCTATCTGCTTATAAGTCATAAGAATAAGAAACATGGGAAATACTTTAATG
AACTTTTAAATCTCATAAAATAATGCTAAAATAAAAATTTGCCTA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001295252	(Get FASTA)	NCBI Sequence Viewer
	NP_033584	(Get FASTA)	NCBI Sequence Viewer
	XP_030105614	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH11183	(Get FASTA)	NCBI Sequence Viewer
	AAR91690	(Get FASTA)	NCBI Sequence Viewer
	BAE21779	(Get FASTA)	NCBI Sequence Viewer
	BAE32413	(Get FASTA)	NCBI Sequence Viewer
	CAA52847	(Get FASTA)	NCBI Sequence Viewer
	EDL05727	(Get FASTA)	NCBI Sequence Viewer
	EDL05728	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000045684
	ENSMUSP00000045684.6

RefSeq Acc Id:

NP_033584 ⟸ NM_009558

- UniProtKB:

Q3U4L8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEETVTKDPASQAGESLYLKEKFKEDKQKEMAYSPVNMPQGLLTFRDVAVDFPQEEWECLDSDQ
RALYIDVMLENYRNLVSVENYCICDTVHQHVKTEKESCQGNKLGEMLHEPSNCALYNRSDTTEA
SNKFRCCNNEDVSVDSSNQNRYKSTHTGEEPCESKDCEKSLTLCSDISQDQRLYNAKQHRQEVY
DDYFSSAYSLMQPTAYIKEKPHQCGKCGKCFNTSSSLTVHHRIHTKEKPYKCSVCDKSFTQCTH
LKIHQRRHTGEKPYKCKECEKSFVQLSALKSHQKLHTGEKPYKCKECDKSFAHYPNFRTHQKIH
TSEEHCSCPECGREFHQLSHLRKHYRLHTGEKPYKCNECDRSFTHYASLRWHQKTHTPEIHYEC
KECGKSFIELSHLKRHYRIHTGEKPYKCEICDKSFTTTTTLKTHQKIHTGEKPYKCRECDKSFI
HSSHLRRHQNVHTGERPYRCKECDKSFHESATLREHEKSHTGEKTYKCRECDKSFTQRAYLRNH
HNRVHTGERPYECKECGKSFTTCSTLRIHQTIHTGKKPYKCIECGKSFTNNSYLRTHQKVHSGE
KPYRCKECDKSFTSCSTLKAHQNIHTGEKPYKCIECDKSFTQVSHLRTHQRVHTGERPFRCTEC
DKSFIRSSHLREHQKIHSGEKPYKCRDCDISFSQISNLRRHQKLHTGEKPYKCMECDKSFTHNS
NFRTHQRVHTGEKPYRCAECDKSFTRCSYLRAHQKIHTGEKPYKCMEYDKPNTQDSNLKRHQRV
HTGVKHTFLNNVT

hide sequence

RefSeq Acc Id:

NP_001295252 ⟸ NM_001308323

- UniProtKB:

Q3U4L8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEETVTKDPASQAGESLYLKEKFKEDKQKEMAYSPVNMPQGLLTFRDVAVDFPQEEWECLDSDQ
RALYIDVMLENYRNLVSVENYCICDTVHQHVKTEKESCQGNKLGEMLHEPSNCALYNRSDTTEA
SNKFRCCNNEDVSVDSSNQNRYKSTHTGEEPCESKDCEKSLTLCSDISQDQRLYNAKQHRQEVY
DDYFSSAYSLMQPTAYIKEKPHQCGKCGKCFNTSSSLTVHHRIHTKEKPYKCSVCDKSFTQCTH
LKIHQRRHTGEKPYKCKECEKSFVQLSALKSHQKLHTGEKPYKCKECDKSFAHYPNFRTHQKIH
TSEEHCSCPECGREFHQLSHLRKHYRLHTGEKPYKCNECDRSFTHYASLRWHQKTHTPEIHYEC
KECGKSFIELSHLKRHYRIHTGEKPYKCEICDKSFTTTTTLKTHQKIHTGEKPYKCRECDKSFI
HSSHLRRHQNVHTGERPYRCKECDKSFHESATLREHEKSHTGEKTYKCRECDKSFTQRAYLRNH
HNRVHTGERPYECKECGKSFTTCSTLRIHQTIHTGKKPYKCIECGKSFTNNSYLRTHQKVHSGE
KPYRCKECDKSFTSCSTLKAHQNIHTGEKPYKCIECDKSFTQVSHLRTHQRVHTGERPFRCTEC
DKSFIRSSHLREHQKIHSGEKPYKCRDCDISFSQISNLRRHQKLHTGEKPYKCMECDKSFTHNS
NFRTHQRVHTGEKPYRCAECDKSFTRCSYLRAHQKIHTGEKPYKCMEYDKPNTQDSNLKRHQRV
HTGVKHTFLNNVT

hide sequence

RefSeq Acc Id:	XP_030105614 ⟸ XM_030249754
- Peptide Label:	isoform X1
- UniProtKB:	Q3U4L8 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSMUSP00000045684 ⟸ ENSMUST00000039577

Protein Domains

C2H2-type KRAB

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q3U4L8-F1-model_v2	AlphaFold	Q3U4L8	1-781	view protein structure

Promoters

RGD ID:

13674882

Promoter ID:

EPDNEW_M21590

Type:

multiple initiation site

Name:

Zfp51_1

Description:

Mus musculus zinc finger protein 51 , transcript variant 2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	17	21,450,387 - 21,450,447	EPDNEW

RGD ID:

6828920

Promoter ID:

MM_KWN:22356

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

ENSMUST00000039577, UC008AQW.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	17	21,587,066 - 21,587,657 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:99198	AgrOrtholog
Ensembl Genes	ENSMUSG00000023892	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000039577	ENTREZGENE
	ENSMUST00000039577.8	UniProtKB/TrEMBL
Gene3D-CATH	6.10.140.140	UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	KRAB_dom_sf	UniProtKB/TrEMBL
	Krueppel-associated_box	UniProtKB/TrEMBL
	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
KEGG Report	mmu:22709	UniProtKB/TrEMBL
MGD	MGI:99198	ENTREZGENE
NCBI Gene	22709	ENTREZGENE
PANTHER	IP01015P-RELATED	UniProtKB/TrEMBL
	ZINC FINGER AND SCAN DOMAIN-CONTAINING	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN 758-RELATED	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN 983	UniProtKB/TrEMBL
Pfam	KRAB	UniProtKB/TrEMBL
	zf-C2H2	UniProtKB/TrEMBL
PhenoGen	Zfp51	PhenoGen
PROSITE	KRAB	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	KRAB	UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	Krueppel-associated_box	UniProtKB/TrEMBL
	SSF57667	UniProtKB/TrEMBL
UniProt	Q3U4L8	ENTREZGENE, UniProtKB/TrEMBL
	Q3UZS6_MOUSE	UniProtKB/TrEMBL
	Q61898_MOUSE	UniProtKB/TrEMBL
	Q91VP4_MOUSE	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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