Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:vascular wound healing
go back to main search page
Accession:GO:0061042 term browser browse the term
Definition:Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.


show annotations for term's descendants           Sort by:
vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipor2 adiponectin receptor 2 involved_in IMP (PMID:24742672) UniProt PMID:24742672 NCBI chr 6:119,330,111...119,394,489
Ensembl chr 6:119,330,111...119,394,665 		JBrowse link
G Cd34 CD34 antigen involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:194,621,239...194,643,587
Ensembl chr 1:194,621,127...194,643,587 		JBrowse link
G Gata2 GATA binding protein 2 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 6:88,170,873...88,184,014
Ensembl chr 6:88,170,873...88,184,014 		JBrowse link
G Hpse heparanase involved_in IDA (PMID:15793281) UniProt PMID:15793281 NCBI chr 5:100,827,350...100,867,582
Ensembl chr 5:100,827,350...100,867,582 		JBrowse link
G Kdr kinase insert domain protein receptor involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 5:76,093,487...76,139,880
Ensembl chr 5:76,093,487...76,139,118 		JBrowse link
G Mcam melanoma cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:44,045,958...44,054,024
Ensembl chr 9:44,045,766...44,054,024 		JBrowse link
G Ndnf neuron-derived neurotrophic factor involved_in IMP (PMID:24706764) UniProt PMID:24706764 NCBI chr 6:65,648,595...65,689,307
Ensembl chr 6:65,648,574...65,689,310 		JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IMP (PMID:32394795) MGI PMID:32394795 NCBI chr 4:43,629,015...43,651,437
Ensembl chr 4:43,631,935...43,651,244 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
negative regulation of vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in IMP (PMID:24226420) UniProt PMID:24226420 NCBI chr 6:116,387,030...116,438,139
Ensembl chr 6:116,387,038...116,438,139 		JBrowse link
G Mir1298 microRNA 1298 acts_upstream_of ISO (PMID:26025955) ARUK-UCL PMID:26025955 NCBI chr  X:145,847,901...145,847,998
Ensembl chr  X:145,847,901...145,847,998 		JBrowse link
G Mir200b microRNA 200b acts_upstream_of ISO (PMID:22499991) BHF-UCL PMID:22499991 NCBI chr 4:156,140,138...156,140,207
Ensembl chr 4:156,140,138...156,140,207 		JBrowse link
G Mir34a microRNA 34a involved_in ISO (PMID:26493107) BHF-UCL PMID:26493107 NCBI chr 4:150,152,911...150,153,012
Ensembl chr 4:150,152,911...150,153,012 		JBrowse link
G Serpine1 serine (or cysteine) peptidase inhibitor, clade E, member 1 involved_in IBA
ISO
IMP		 (PMID:9386191) GO_Central
BHF-UCL		 PMID:9386191 GO_REF:0000033 GO_REF:0000119 NCBI chr 5:137,090,358...137,101,126
Ensembl chr 5:137,090,358...137,101,122 		JBrowse link
G Slc12a2 solute carrier family 12, member 2 acts_upstream_of_or_within IMP (PMID:28577991) ARUK-UCL PMID:28577991 NCBI chr18:58,011,505...58,079,893
Ensembl chr18:58,011,750...58,079,893 		JBrowse link
G Tafa5 TAFA chemokine like family member 5 acts_upstream_of_or_within ISO
IDA		 (PMID:29453251) MGI PMID:29453251 NCBI chr15:87,428,405...87,643,565
Ensembl chr15:87,428,500...87,643,565 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983 		JBrowse link
positive regulation of vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcr4 C-X-C motif chemokine receptor 4 involved_in ISO RGD
GO_Central		 PMID:24955809 GO_REF:0000096 RGD:11352686 NCBI chr 1:128,515,936...128,520,036
Ensembl chr 1:128,515,936...128,520,030 		JBrowse link
G Foxc2 forkhead box C2 involved_in IDA (PMID:18579532) BHF-UCL PMID:18579532 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit involved_in ISO RGD
GO_Central		 PMID:30052311 GO_REF:0000096 RGD:155663378 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304 		JBrowse link
G Mir451a microRNA 451a involved_in ISO (PMID:25006399) BHF-UCL PMID:25006399 NCBI chr11:77,963,996...77,964,067
Ensembl chr11:77,963,996...77,964,067 		JBrowse link
G Smoc2 SPARC related modular calcium binding 2 involved_in ISO GO_Central GO_REF:0000119 NCBI chr17:14,499,768...14,625,052
Ensembl chr17:14,499,768...14,625,052 		JBrowse link
G Vegfb vascular endothelial growth factor B involved_in ISO GO_Central GO_REF:0000119 NCBI chr19:6,959,840...6,965,019
Ensembl chr19:6,959,841...6,965,019 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr11:5,470,641...5,475,993
Ensembl chr11:5,470,659...5,475,893 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28635
    developmental process 7491
      anatomical structure formation involved in morphogenesis 1441
        angiogenesis 688
          angiogenesis involved in wound healing 34
            vascular wound healing 24
              negative regulation of vascular wound healing 8
              positive regulation of vascular wound healing 7
              regulation of vascular wound healing + 15
Path 2
Term Annotations click to browse term
  biological_process 28635
    developmental process 7491
      anatomical structure development 6960
        multicellular organism development 5537
          system development 4761
            circulatory system development 1442
              vasculature development 951
                blood vessel development 906
                  blood vessel morphogenesis 793
                    angiogenesis 688
                      angiogenesis involved in wound healing 34
                        vascular wound healing 24
                          negative regulation of vascular wound healing 8
                          positive regulation of vascular wound healing 7
                          regulation of vascular wound healing + 15
paths to the root