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ONTOLOGY REPORT - ANNOTATIONS


Term:angiogenesis involved in wound healing
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Accession:GO:0060055 term browser browse the term
Definition:Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to a damaged tissue, following an injury.



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angiogenesis involved in wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt1 beta-1,4-galactosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2450889 (MGI:3038538|PMID:15039218)
Ensembl
RGD
PMID:15039218 GO_REF:0000107 MGI:3038538 NCBI chr 5:55,935,614...55,982,461
Ensembl chr 5:55,935,615...55,982,461
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3608773 (MGI:3772530|PMID:18097059)
Ensembl
RGD
PMID:18097059 GO_REF:0000107 MGI:3772530 NCBI chr19:10,227,337...10,237,826
Ensembl chr19:10,227,340...10,236,833
JBrowse link
G Dag1 dystroglycan 1 IEP RGD PMID:21192954 RGD:11541061 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor IEP RGD PMID:9600079 RGD:2313680 NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010
JBrowse link
G Gpr4 G protein-coupled receptor 4 acts_upstream_of_or_within ISO (MGI:3699048|PMID:17145776) RGD PMID:17145776 MGI:3699048 NCBI chr 1:78,865,376...78,877,126
Ensembl chr 1:78,865,409...78,876,599
JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2158814 (MGI:3698597|PMID:16373599)
Ensembl
RGD
PMID:16373599 GO_REF:0000107 MGI:3698597 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024
JBrowse link
G Hpse heparanase involved_in ISO
IBA
(MGI:3574236|PMID:15793281)
PMID:21873635
RGD PMID:15793281 PMID:21873635 MGI:3574236, RGD:13792537 NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010
JBrowse link
G Mir222 microRNA 222 IMP RGD PMID:27545451 RGD:151893485 NCBI chr  X:3,428,904...3,429,006
Ensembl chr  X:3,428,904...3,429,006
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3795849 (MGI:5604041|PMID:25139353)
Ensembl
RGD
PMID:25139353 GO_REF:0000107 MGI:5604041 NCBI chr 8:99,594,600...99,699,772
Ensembl chr 8:99,594,644...99,699,663
JBrowse link
G Prcp prolylcarboxypeptidase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:4123993 (MGI:5515692|PMID:23744584)
RGD PMID:23744584 PMID:21873635 MGI:5515692, RGD:13792537 NCBI chr 1:146,931,487...146,983,891
Ensembl chr 1:146,930,561...146,984,530
JBrowse link
G Stard13 StAR-related lipid transfer domain containing 13 NOT|acts_upstream_of_or_within ISO MGI:4363733 (MGI:4887522|PMID:20208559) RGD PMID:20208559 MGI:4887522 NCBI chr12:566,282...959,372
Ensembl chr12:566,310...959,421
JBrowse link
negative regulation of vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5562469|PMID:24226420)
UniProt
Ensembl
RGD
PMID:24226420 GO_REF:0000024 GO_REF:0000107 MGI:5562469 NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
JBrowse link
G Mir200b microRNA 200b acts_upstream_of ISO (PMID:22499991) RGD PMID:22499991 NCBI chr 5:166,649,272...166,649,366
Ensembl chr 5:166,649,272...166,649,366
JBrowse link
G Mir34a microRNA 34a involved_in ISO (PMID:26493107) RGD PMID:26493107 NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103
JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO
IBA
IEA
UniProtKB:P22777 (PMID:9386191)
(MGI:1100384|PMID:9386191)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:9386191 PMID:21873635 GO_REF:0000107 MGI:1100384, RGD:13792537 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Slc12a2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO (MGI:6392927|PMID:28577991) RGD PMID:28577991 MGI:6392927 NCBI chr18:51,348,282...51,416,448
Ensembl chr18:51,348,302...51,416,440
JBrowse link
G Tafa5 TAFA chemokine like family member 5 acts_upstream_of_or_within ISO
IDA
(MGI:6380922|PMID:29453251) RGD PMID:29453251 PMID:29453251 MGI:6380922, RGD:42721986 NCBI chr 7:118,613,731...118,835,016
Ensembl chr 7:118,613,889...118,834,353
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:22499991) RGD PMID:22499991 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
positive regulation of vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:24955809 RGD:11352686 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
JBrowse link
G Foxc2 forkhead box C2 involved_in ISO (MGI:3813419|PMID:18579532) RGD PMID:18579532 MGI:3813419 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
JBrowse link
G Mir451a microRNA 451a involved_in ISO (PMID:25006399) RGD PMID:25006399 NCBI chr10:62,961,520...62,961,591
Ensembl chr10:62,961,520...62,961,591
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 involved_in ISO (PMID:16774925) RGD PMID:16774925 NCBI chr 1:55,262,472...55,391,804
Ensembl chr 1:55,262,530...55,391,693
JBrowse link
G Vegfb vascular endothelial growth factor B involved_in ISO (PMID:16109918) RGD PMID:16109918 NCBI chr 1:204,172,297...204,178,046
Ensembl chr 1:204,172,225...204,177,944
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO
IEA
(PMID:25656649)
GO_REF:0000107
RGD
Ensembl
PMID:25656649 GO_REF:0000107 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
vascular wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipor2 adiponectin receptor 2 involved_in ISO (MGI:5607379|PMID:24742672) RGD PMID:24742672 MGI:5607379 NCBI chr 4:152,524,604...152,588,848
Ensembl chr 4:152,524,623...152,559,355
JBrowse link
G Cd34 CD34 molecule involved_in ISO (PMID:20354148) RGD PMID:20354148 NCBI chr13:106,480,074...106,499,462
Ensembl chr13:106,480,043...106,499,832
JBrowse link
G Gata2 GATA binding protein 2 involved_in ISO (PMID:22499991) RGD PMID:22499991 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
JBrowse link
G Hpse heparanase involved_in IEA
ISO
GO_REF:0000107
(MGI:3574236|PMID:15793281)
Ensembl
RGD
PMID:15793281 GO_REF:0000107 MGI:3574236 NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010
JBrowse link
G Kdr kinase insert domain receptor involved_in ISO
IEA
(PMID:22499991), (PMID:23688497)
GO_REF:0000107
RGD
Ensembl
PMID:22499991 PMID:23688497 GO_REF:0000107 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Mcam melanoma cell adhesion molecule involved_in ISO (PMID:20354148) RGD PMID:20354148 NCBI chr 8:44,479,391...44,487,575
Ensembl chr 8:44,479,376...44,487,571
JBrowse link
G Ndnf neuron-derived neurotrophic factor involved_in ISO (MGI:5607385|PMID:24706764) RGD PMID:24706764 MGI:5607385 NCBI chr 4:94,944,749...94,987,414
Ensembl chr 4:94,944,360...94,981,873
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:23688497) RGD PMID:23688497 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20094
    developmental process 7006
      anatomical structure formation involved in morphogenesis 1336
        angiogenesis 611
          angiogenesis involved in wound healing 31
            vascular wound healing + 21
Path 2
Term Annotations click to browse term
  biological_process 20094
    developmental process 7006
      anatomical structure development 6444
        multicellular organism development 5224
          system development 4484
            circulatory system development 1328
              vasculature development 859
                blood vessel development 817
                  blood vessel morphogenesis 717
                    angiogenesis 611
                      angiogenesis involved in wound healing 31
                        vascular wound healing + 21
paths to the root