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ONTOLOGY REPORT - ANNOTATIONS

Term:roof of mouth development
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Accession:GO:0060021 term browser browse the term
Definition:The biological process whose specific outcome is the progression of the roof of the mouth from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The roof of the mouth is the partition that separates the nasal and oral cavities.
Synonyms:exact_synonym: palatum development


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roof of mouth development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR2B activin A receptor type 2B acts_upstream_of_or_within ISO (PMID:16845371) MGI PMID:16845371 NCBI chr23:8,211,555...8,225,596
Ensembl chr23:8,192,483...8,218,894 		JBrowse link
G ALX1 ALX homeobox 1 acts_upstream_of_or_within ISO (PMID:9847249) MGI PMID:9847249 NCBI chr15:26,838,615...26,858,786
Ensembl chr15:26,834,670...26,858,803 		JBrowse link
G ALX4 ALX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9847249) Ensembl
MGI		 PMID:9847249 GO_REF:0000107 NCBI chr18:44,922,042...44,967,557
Ensembl chr18:44,922,150...44,967,550 		JBrowse link
G ANKRD11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO (PMID:33996804) MGI PMID:33996804 NCBI chr 5:64,047,188...64,229,582
Ensembl chr 5:64,047,175...64,229,077 		JBrowse link
G ANP32B acidic nuclear phosphoprotein 32 family member B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21636789) Ensembl
MGI		 PMID:21636789 GO_REF:0000107 NCBI chr11:55,230,017...55,272,744
Ensembl chr11:55,243,854...55,350,194 		JBrowse link
G ARID5B AT-rich interaction domain 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17143286) Ensembl
MGI		 PMID:17143286 GO_REF:0000107 NCBI chr 4:13,926,759...14,105,069
Ensembl chr 4:13,927,217...14,101,364 		JBrowse link
G ASPH aspartate beta-hydroxylase acts_upstream_of_or_within ISO (PMID:11773073) MGI PMID:11773073 NCBI chr29:11,812,275...12,022,755
Ensembl chr29:11,814,554...12,022,680 		JBrowse link
G B3GLCT beta 3-glucosyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31600785) MGI
Ensembl		 PMID:31600785 GO_REF:0000107 NCBI chr25:8,815,681...8,938,899
Ensembl chr25:8,817,628...8,939,249 		JBrowse link
G BCOR BCL6 corepressor involved_in ISO (PMID:17517692) UniProt PMID:17517692 NCBI chr  X:34,621,314...34,735,502
Ensembl chr  X:34,621,886...34,645,766 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15716346) Ensembl
MGI		 PMID:15716346 GO_REF:0000107 NCBI chr 4:34,499,898...34,582,481
Ensembl chr 4:34,517,492...34,578,923 		JBrowse link
G BNC2 basonuclin zinc finger protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19706529) Ensembl
MGI		 PMID:19706529 GO_REF:0000107 NCBI chr11:36,511,581...36,950,111
Ensembl chr11:36,514,166...36,950,679 		JBrowse link
G CDK20 cyclin dependent kinase 20 acts_upstream_of_or_within ISO (PMID:28817564) MGI PMID:28817564 NCBI chr 1:97,623,126...97,662,668
Ensembl chr 1:97,622,998...97,662,662 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16207732) Ensembl
MGI		 PMID:16207732 GO_REF:0000107 NCBI chr29:11,115,865...11,284,713
Ensembl chr29:11,156,340...11,283,627 		JBrowse link
G COL11A2 collagen type XI alpha 2 chain involved_in ISO (PMID:12673280) UniProt PMID:12673280 NCBI chr12:2,626,829...2,656,680
Ensembl chr12:2,627,828...2,655,814 		JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7276808) Ensembl
MGI		 PMID:7276808 GO_REF:0000107 NCBI chr27:6,756,994...6,787,733
Ensembl chr27:6,756,994...6,787,733 		JBrowse link
G CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25877302) Ensembl
MGI		 PMID:25877302 GO_REF:0000107 NCBI chr 4:71,435,994...71,567,567
Ensembl chr 4:71,430,575...71,567,267 		JBrowse link
G CSRNP1 cysteine and serine rich nuclear protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17143286) Ensembl
MGI		 PMID:17143286 GO_REF:0000107 NCBI chr23:8,815,848...8,829,062
Ensembl chr23:8,817,053...8,822,979 		JBrowse link
G DHRS3 dehydrogenase/reductase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24005908) Ensembl
MGI		 PMID:24005908 GO_REF:0000107 NCBI chr 2:83,826,361...83,865,412
Ensembl chr 2:83,826,374...83,865,426 		JBrowse link
G DLX5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16330189)
(PMID:17420000)		 Ensembl
MGI		 PMID:16330189 PMID:17420000 GO_REF:0000107 NCBI chr14:22,080,351...22,085,188
Ensembl chr14:22,080,699...22,084,867 		JBrowse link
G DLX6 distal-less homeobox 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17420000) Ensembl
MGI		 PMID:17420000 GO_REF:0000107 NCBI chr14:22,067,253...22,086,284
Ensembl chr14:22,067,149...22,220,799 		JBrowse link
G EPHB2 EPH receptor B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786 		JBrowse link
G EPHB3 EPH receptor B3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:17,422,746...17,433,769
Ensembl chr34:17,422,842...17,462,954 		JBrowse link
G FOXE1 forkhead box E1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22304410) Ensembl
MGI		 PMID:22304410 GO_REF:0000107 NCBI chr11:55,143,389...55,145,954 JBrowse link
G FOXF2 forkhead box F2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:1,841,165...1,846,649
Ensembl chr35:1,841,123...1,846,663 		JBrowse link
G FRAS1 Fraser extracellular matrix complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23469164) Ensembl
MGI		 PMID:23469164 GO_REF:0000107 NCBI chr32:2,558,442...2,993,199
Ensembl chr32:2,558,354...2,991,063 		JBrowse link
G FUZ fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (PMID:27158779) MGI PMID:27158779 NCBI chr 1:106,742,381...106,752,543
Ensembl chr 1:106,747,860...106,805,699 		JBrowse link
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 involved_in ISO (PMID:9108119) UniProt PMID:9108119 NCBI chr 3:33,878,948...34,101,987
Ensembl chr 3:33,878,904...34,097,764 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:17525797) MGI PMID:17525797 NCBI chr 1:72,927,346...72,930,119
Ensembl chr 1:72,927,670...72,928,827 		JBrowse link
G GDF11 growth differentiation factor 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24019467) Ensembl
MGI		 PMID:24019467 GO_REF:0000107 NCBI chr10:142,039...152,537
Ensembl chr10:145,036...148,373 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18816854) Ensembl
MGI		 PMID:18816854 GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17531968), (PMID:19341725) Ensembl
MGI		 PMID:17531968 PMID:19341725 GO_REF:0000107 NCBI chr25:24,140,496...24,143,143
Ensembl chr25:24,141,243...24,152,958 		JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21653639) Ensembl
MGI		 PMID:21653639 GO_REF:0000107 NCBI chr17:21,389,462...21,426,970
Ensembl chr17:21,389,482...21,426,796 		JBrowse link
G INHBA inhibin subunit beta A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:8,272,978...8,288,432
Ensembl chr18:8,272,872...8,283,794 		JBrowse link
G INSIG1 insulin induced gene 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16955138) Ensembl
MGI		 PMID:16955138 GO_REF:0000107 NCBI chr16:18,260,456...18,271,855
Ensembl chr16:18,259,935...18,271,378 		JBrowse link
G INSIG2 insulin induced gene 2 acts_upstream_of_or_within ISO (PMID:16955138) MGI PMID:16955138 NCBI chr19:31,796,984...31,811,556
Ensembl chr19:31,791,710...31,811,386 		JBrowse link
G INTU inturned planar cell polarity protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:13,193,252...13,276,593
Ensembl chr19:13,164,245...13,276,496 		JBrowse link
G IRF6 interferon regulatory factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21515572) Ensembl
MGI		 PMID:21515572 GO_REF:0000107 NCBI chr 7:8,447,826...8,467,265
Ensembl chr 7:8,448,538...8,462,661 		JBrowse link
G LOXL3 lysyl oxidase like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:48,590,996...48,610,264
Ensembl chr17:48,591,768...48,610,392 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19653321)
(PMID:19700620)		 MGI PMID:19653321 PMID:19700620 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G MEF2C myocyte enhancer factor 2C acts_upstream_of_or_within ISO (PMID:17420000) MGI PMID:17420000 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852 		JBrowse link
G MEN1 menin 1 acts_upstream_of_or_within ISO (PMID:17927973) MGI PMID:17927973 NCBI chr18:52,346,747...52,352,884
Ensembl chr18:52,346,933...52,353,340 		JBrowse link
G MEOX2 mesenchyme homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16284941) Ensembl
MGI		 PMID:16284941 GO_REF:0000107 NCBI chr14:30,258,737...30,324,438
Ensembl chr14:29,864,318...30,324,006 		JBrowse link
G MSC musculin involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:20,800,047...20,802,718
Ensembl chr29:20,800,062...20,802,657 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16330189) Ensembl
MGI		 PMID:16330189 GO_REF:0000107 NCBI chr 3:70,232,790...70,236,295
Ensembl chr 3:70,232,052...70,236,447 		JBrowse link
G NPRL3 NPR3 like, GATOR1 complex subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22538705) Ensembl
MGI		 PMID:22538705 GO_REF:0000107 NCBI chr 6:40,351,757...40,394,599
Ensembl chr 6:40,352,477...40,390,489 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:1,019,167...1,031,622
Ensembl chr13:1,023,879...1,031,225 		JBrowse link
G PAK1IP1 PAK1 interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23935987) Ensembl
MGI		 PMID:23935987 GO_REF:0000107 NCBI chr35:10,436,179...10,446,078
Ensembl chr35:10,436,226...10,445,853 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17143286) Ensembl
MGI		 PMID:17143286 GO_REF:0000107 NCBI chr13:46,729,722...46,775,828
Ensembl chr13:46,730,703...46,773,278 		JBrowse link
G PDS5A PDS5 cohesin associated factor A acts_upstream_of_or_within ISO (PMID:19412548) MGI PMID:19412548 NCBI chr 3:72,521,839...72,673,164
Ensembl chr 3:72,521,868...72,673,164 		JBrowse link
G PKDCC protein kinase domain containing, cytoplasmic involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:33,659,352...33,669,237
Ensembl chr17:33,659,272...33,668,892 		JBrowse link
G PLEKHA1 pleckstrin homology domain containing A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17143286) Ensembl
MGI		 PMID:17143286 GO_REF:0000107 NCBI chr28:32,025,791...32,081,824
Ensembl chr28:32,026,350...32,081,835 		JBrowse link
G PRDM16 PR/SET domain 16 acts_upstream_of_or_within ISO (PMID:20007998) MGI PMID:20007998 NCBI chr 5:57,805,951...58,018,817
Ensembl chr 5:57,730,370...58,017,976 		JBrowse link
G PRRX1 paired related homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7758948) Ensembl
MGI		 PMID:7758948 GO_REF:0000107 NCBI chr 7:28,065,570...28,138,734
Ensembl chr 7:28,068,711...28,138,787 		JBrowse link
G PYGO2 pygopus family PHD finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17425782) Ensembl
MGI		 PMID:17425782 GO_REF:0000107 NCBI chr 7:42,509,760...42,513,744
Ensembl chr 7:42,509,968...42,512,091 		JBrowse link
G SATB2 SATB homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16960803)
(PMID:16751105)		 Ensembl
MGI		 PMID:16751105 PMID:16960803 GO_REF:0000107 NCBI chr37:8,548,295...8,837,416
Ensembl chr37:8,551,017...8,731,149 		JBrowse link
G SDHAF3 succinate dehydrogenase complex assembly factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:22,153,377...22,221,918 JBrowse link
G SGPL1 sphingosine-1-phosphate lyase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17143286) Ensembl
MGI		 PMID:17143286 GO_REF:0000107 NCBI chr 4:21,666,264...21,717,476
Ensembl chr 4:21,660,939...21,715,155 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19304890) Ensembl
MGI		 PMID:19304890 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:11731796) MGI PMID:11731796 NCBI chr 5:57,144,178...57,216,385
Ensembl chr 5:57,145,825...57,214,403 		JBrowse link
G SNAI1 snail family transcriptional repressor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17376812) Ensembl
MGI		 PMID:17376812 GO_REF:0000107 NCBI chr24:36,498,343...36,503,623
Ensembl chr24:36,498,062...36,503,628 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO (PMID:17376812) MGI PMID:17376812 NCBI chr29:1,154,132...1,156,653
Ensembl chr29:1,154,036...1,156,653 		JBrowse link
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9030684) Ensembl
MGI		 PMID:9030684 GO_REF:0000107 NCBI chr17:31,007,940...31,181,569
Ensembl chr17:31,009,257...31,142,063 		JBrowse link
G SUMO1 small ubiquitin like modifier 1 involved_in ISO (PMID:16990542) UniProt PMID:16990542 NCBI chr37:11,199,937...11,229,743
Ensembl chr37:11,200,590...11,229,754 		JBrowse link
G TBC1D32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28817564) Ensembl
MGI		 PMID:28817564 GO_REF:0000107 NCBI chr 1:60,662,704...60,873,881
Ensembl chr 1:60,667,721...60,873,614 		JBrowse link
G TBX2 T-box transcription factor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19769959) MGI
Ensembl		 PMID:19769959 GO_REF:0000107 NCBI chr 9:35,237,323...35,245,066
Ensembl chr 9:35,235,649...35,245,736 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19769959) Ensembl
MGI		 PMID:19769959 GO_REF:0000107 NCBI chr26:11,694,885...11,709,594
Ensembl chr26:11,696,565...11,708,918 		JBrowse link
G TCF21 transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:26,856,281...26,859,654
Ensembl chr 1:26,856,587...26,859,647 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISO (PMID:21204207) UniProt PMID:21204207 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
G TGFB3 transforming growth factor beta 3 acts_upstream_of_or_within ISO (PMID:16245336) MGI PMID:16245336 NCBI chr 8:48,920,874...48,946,037
Ensembl chr 8:48,923,423...48,945,816 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16806156)
(PMID:16845371)		 Ensembl
MGI		 PMID:16806156 PMID:16845371 GO_REF:0000107 NCBI chr11:56,191,383...56,223,042
Ensembl chr11:56,161,772...56,218,594 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:13,886,869...13,946,480
Ensembl chr23:13,889,000...13,977,636 		JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO (PMID:25382630) MGI PMID:25382630 NCBI chr 6:57,025,096...57,220,240
Ensembl chr 6:57,025,112...57,217,121 		JBrowse link
G TIPARP TCDD inducible poly(ADP-ribose) polymerase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17143286) Ensembl
MGI		 PMID:17143286 GO_REF:0000107 NCBI chr23:50,253,645...50,279,615
Ensembl chr23:50,249,327...50,280,144 		JBrowse link
G TMEM107 transmembrane protein 107 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28954202) Ensembl
MGI		 PMID:28954202 GO_REF:0000107 NCBI chr 5:32,991,000...32,993,319
Ensembl chr 5:32,991,021...32,993,248 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 ISO RGD PMID:11330859 RGD:5131603
G VAX1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10601035) Ensembl
MGI		 PMID:10601035 GO_REF:0000107 NCBI chr28:27,624,699...27,628,736
Ensembl chr28:27,623,971...27,628,717 		JBrowse link
G WDPCP WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27158779)
(PMID:24302887)		 Ensembl
MGI		 PMID:24302887 PMID:27158779 GO_REF:0000107 NCBI chr10:62,894,818...63,316,555
Ensembl chr10:62,877,527...63,316,345 		JBrowse link
G WFIKKN1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24019467) Ensembl
MGI		 PMID:24019467 GO_REF:0000107 NCBI chr 6:39,934,105...39,937,666
Ensembl chr 6:39,934,068...39,936,628 		JBrowse link
G WFIKKN2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24019467) Ensembl
MGI		 PMID:24019467 GO_REF:0000107 NCBI chr 9:26,711,470...26,717,625
Ensembl chr 9:26,711,959...26,716,348 		JBrowse link
G WNT11 Wnt family member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18191119) Ensembl
MGI		 PMID:18191119 GO_REF:0000107 NCBI chr21:22,442,496...22,463,040
Ensembl chr21:22,446,051...22,463,173 		JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16054034) Ensembl
MGI		 PMID:16054034 GO_REF:0000107 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654 		JBrowse link
epithelial cell apoptotic process involved in palatal shelf morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JAG2 jagged canonical Notch ligand 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16607638) Ensembl
MGI		 PMID:16607638 GO_REF:0000107 NCBI chr 8:72,535,539...72,553,531
Ensembl chr 8:72,535,107...72,550,322 		JBrowse link
hard palate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLG1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11238884)
(PMID:17435047)		 Ensembl
MGI		 PMID:11238884 PMID:17435047 GO_REF:0000107 NCBI chr33:30,016,323...30,253,180
Ensembl chr33:30,016,600...30,253,547 		JBrowse link
G FOXE1 forkhead box E1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:55,143,389...55,145,954 JBrowse link
G FZD1 frizzled class receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20940229) Ensembl
MGI		 PMID:20940229 GO_REF:0000107 NCBI chr14:17,046,911...17,050,515
Ensembl chr14:17,047,382...17,049,337 		JBrowse link
G FZD2 frizzled class receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20940229) Ensembl
MGI		 PMID:20940229 GO_REF:0000107 NCBI chr 9:18,888,711...18,890,549
Ensembl chr 9:18,888,696...18,890,525 		JBrowse link
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:7581464), (PMID:8146195), (PMID:8389469)
(PMID:12606284), (PMID:7581464)		 MGI PMID:7581464 PMID:8146195 PMID:8389469 PMID:12606284 NCBI chr 3:33,878,948...34,101,987
Ensembl chr 3:33,878,904...34,097,764 		JBrowse link
G ITGB6 integrin subunit beta 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19118215) Ensembl
MGI		 PMID:19118215 GO_REF:0000107 NCBI chr36:5,833,206...5,962,699
Ensembl chr36:5,834,638...5,962,633 		JBrowse link
G ITGB8 integrin subunit beta 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19118215) Ensembl
MGI		 PMID:19118215 GO_REF:0000107 NCBI chr14:34,370,957...34,449,091
Ensembl chr14:34,349,232...34,444,235 		JBrowse link
G MMP25 matrix metallopeptidase 25 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20809987) Ensembl
MGI		 PMID:20809987 GO_REF:0000107 NCBI chr 6:38,128,585...38,139,882
Ensembl chr 6:38,130,092...38,140,007 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA Ensembl GO_REF:0000107
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:30121012) MGI PMID:30121012 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784 		JBrowse link
primary palate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BBS7 Bardet-Biedl syndrome 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22228099) Ensembl
MGI		 PMID:22228099 GO_REF:0000107 NCBI chr19:18,280,487...18,319,128
Ensembl chr19:18,280,520...18,315,825 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17531968) Ensembl
MGI		 PMID:17531968 GO_REF:0000107 NCBI chr25:24,140,496...24,143,143
Ensembl chr25:24,141,243...24,152,958 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:22228099) MGI PMID:22228099 NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266 		JBrowse link
secondary palate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHD7 chromodomain helicase DNA binding protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:11,115,865...11,284,713
Ensembl chr29:11,156,340...11,283,627 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in ISO (PMID:14691138) BHF-UCL PMID:14691138 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019 		JBrowse link
G LRRC32 leucine rich repeat containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:22,051,140...22,059,714
Ensembl chr21:22,051,920...22,057,632 		JBrowse link
G SMAD2 SMAD family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:43,696,883...43,778,063
Ensembl chr 7:43,700,445...43,769,983 		JBrowse link
G SMAD4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:23,875,989...23,930,027
Ensembl chr 1:23,882,139...23,969,405 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISO (PMID:9217007) BHF-UCL PMID:9217007 NCBI chr38:13,430,832...13,511,655
Ensembl chr38:13,429,148...13,510,242 		JBrowse link
G TGFB3 transforming growth factor beta 3 involved_in ISO (PMID:10433915), (PMID:14691138), (PMID:28912269), (PMID:7493021), (PMID:7493022) UniProt PMID:7493021 PMID:7493022 PMID:10433915 PMID:14691138 PMID:28912269 NCBI chr 8:48,920,874...48,946,037
Ensembl chr 8:48,923,423...48,945,816 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:13,886,869...13,946,480
Ensembl chr23:13,889,000...13,977,636 		JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 involved_in ISO (PMID:17295310) BHF-UCL PMID:17295310 NCBI chr 6:57,025,096...57,220,240
Ensembl chr 6:57,025,112...57,217,121 		JBrowse link
G WNT11 Wnt family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:22,442,496...22,463,040
Ensembl chr21:22,446,051...22,463,173 		JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
G WNT7A Wnt family member 7A involved_in ISO (PMID:18413325) BHF-UCL PMID:18413325 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436 		JBrowse link
G WNT8A Wnt family member 8A involved_in ISO (PMID:18413325) BHF-UCL PMID:18413325 NCBI chr11:25,707,058...25,752,724
Ensembl chr11:25,744,780...25,749,748 		JBrowse link
soft palate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL11A2 collagen type XI alpha 2 chain involved_in ISO (PMID:10677296) UniProt PMID:10677296 NCBI chr12:2,626,829...2,656,680
Ensembl chr12:2,627,828...2,655,814 		JBrowse link
G FOXE1 forkhead box E1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:55,143,389...55,145,954 JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA Ensembl GO_REF:0000107
G TBX1 T-box transcription factor 1 involved_in ISO (PMID:14585638) UniProt PMID:14585638 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784 		JBrowse link
G TSHZ1 teashirt zinc finger homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17586487) Ensembl
MGI		 PMID:17586487 GO_REF:0000107 NCBI chr 1:4,224,875...4,229,755
Ensembl chr 1:4,226,210...4,246,762 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 22103
    developmental process 6888
      anatomical structure development 6450
        roof of mouth development 103
          primary palate development 3
          primitive palate development 0
          secondary palate development + 27
paths to the root