WDPCP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 10 | 62,894,818 - 63,316,555 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 10 | 62,877,527 - 63,316,345 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 10 | 62,782,163 - 63,206,565 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 10 | 63,901,715 - 64,326,640 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 10 | 63,884,301 - 64,325,262 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 10 | 63,584,532 - 64,009,171 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 10 | 63,888,001 - 64,317,400 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 10 | 64,185,201 - 64,609,983 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
WDPCP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 2 | 63,119,559 - 63,840,826 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 63,119,559 - 63,827,843 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 63,346,694 - 63,815,611 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 63,202,022 - 63,669,355 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 2 | 63,193,063 - 63,660,892 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | p15 | NCBI | | | | | HuRef | 2 | 63,087,448 - 63,556,897 (-) | NCBI | | HuRef | | | CHM1_1 | 2 | 63,278,766 - 63,746,004 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 63,126,634 - 63,848,517 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Wdpcp (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 11 | 21,521,969 - 21,848,686 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 21,522,235 - 21,848,989 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 21,571,969 - 21,898,687 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 21,572,235 - 21,898,989 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 11 | 21,472,284 - 21,798,689 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 11 | 21,472,284 - 21,798,689 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 11 | 23,720,548 - 24,045,720 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | A3.1 | NCBI | | | | | cM Map | 11 | 13.9 | NCBI | | | | |
|
Wdpcp (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 14 | 99,847,463 - 100,178,392 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 95,645,955 - 95,977,120 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 95,646,038 - 95,977,113 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 14 | 99,998,307 - 100,329,037 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 101,238,649 - 101,569,383 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 97,712,185 - 98,042,918 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 106,393,959 - 106,759,511 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 106,393,959 - 106,759,505 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 106,464,351 - 106,823,523 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 14 | 102,274,144 - 102,612,376 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 14 | 102,385,822 - 102,631,969 (+) | NCBI | | | | | Celera | 14 | 94,655,473 - 94,975,636 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | q22 | NCBI | | | | |
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Wdpcp (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955424 | 20,723,592 - 21,114,801 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
WDPCP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 12 | 62,560,478 - 63,290,579 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2A | 62,564,429 - 63,294,530 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2A | 63,180,279 - 63,658,804 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2A | 64,323,118 - 64,785,322 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2A | 64,325,379 - 64,785,256 (-) | Ensembl | panpan1.1 | | panPan2 | |
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Wdpcp (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024406292 | 20,000,470 - 20,334,532 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936491 | 8,239,284 - 8,485,636 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936491 | 8,238,644 - 8,749,172 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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WDPCP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 3 | 78,268,922 - 78,856,893 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 3 | 78,435,154 - 78,726,313 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 3 | 82,738,390 - 82,792,999 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
WDPCP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 14 | 43,425,405 - 43,896,015 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 14 | 43,526,525 - 43,898,300 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666045 | 67,944,581 - 68,435,636 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Wdpcp (Heterocephalus glaber - naked mole-rat) |
|