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Gene: SKI (SKI proto-oncogene) Canis lupus familiaris

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Symbol:

SKI

Name:

SKI proto-oncogene

RGD ID:

12318552

Description:

ENCODES a protein that exhibits chromatin binding (ortholog); histone deacetylase inhibitor activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); bone morphogenesis (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH aortic aneurysm (ortholog); ARTERIAL DISSECTION (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); transcription repressor complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ski oncogene; v-ski avian sarcoma viral oncogene homolog; v-ski sarcoma viral oncogene homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SKI (SKI proto-oncogene)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Ski (ski sarcoma viral oncogene homolog (avian))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ski (Ski proto-oncogene)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ski (SKI proto-oncogene)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SKI (SKI proto-oncogene)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ski (SKI proto-oncogene)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SKI (SKI proto-oncogene)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SKI (SKI proto-oncogene)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ski (SKI proto-oncogene)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	57,144,178 - 57,216,385 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	57,145,825 - 57,214,403 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	57,222,188 - 57,292,743 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	57,347,931 - 57,418,465 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	57,347,008 - 57,415,963 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	57,339,163 - 57,409,707 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	57,231,570 - 57,302,105 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	57,621,138 - 57,691,705 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
SKI	Dog	ARTERIAL DISSECTION		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Arterial dissection	ClinVar	PMID:28492532
SKI	Dog	autism spectrum disorder		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism spectrum disorders	ClinVar	PMID:25741868 and PMID:28492532
SKI	Dog	chromosome 1p36 deletion syndrome		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Chromosome 1p36 deletion syndrome	ClinVar
SKI	Dog	congenital myasthenic syndrome 8		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Congenital myasthenic syndrome 8	ClinVar	PMID:24951643 and PMID:28492532
SKI	Dog	dilated cardiomyopathy 1LL		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Left ventricular noncompaction 8	ClinVar	PMID:28492532
SKI	Dog	Disproportionate Tall Stature		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Disproportionate tall stature	ClinVar	PMID:25741868 and PMID:28492532
SKI	Dog	Ehlers-Danlos syndrome spondylodysplastic type 2		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Ehlers-Danlos syndrome more ...	ClinVar	PMID:10862081 more ...
SKI	Dog	genetic disease		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:19114989 more ...
SKI	Dog	Goldberg-Shprintzen syndrome		ISO	SKI (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:15979919 more ...
SKI	Dog	Goldberg-Shprintzen syndrome		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Shprintzen-Goldberg syndrome	ClinVar	PMID:15979919 more ...
SKI	Dog	Goldberg-Shprintzen syndrome		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Shprintzen-Goldberg syndrome	ClinVar	PMID:15979919 more ...
SKI	Dog	Goldberg-Shprintzen syndrome		ISO	SKI (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:15979919 more ...
SKI	Dog	Goldberg-Shprintzen syndrome		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Shprintzen-Goldberg syndrome	ClinVar	PMID:15979919 more ...
SKI	Dog	Goldberg-Shprintzen syndrome		ISO	SKI (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:17576681 more ...
SKI	Dog	Goldberg-Shprintzen syndrome		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Shprintzen-Goldberg syndrome	ClinVar	PMID:15979919 more ...
SKI	Dog	Goldberg-Shprintzen syndrome		ISO	SKI (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:15979919 more ...
SKI	Dog	Idiopathic Generalized Epilepsy		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Idiopathic generalized epilepsy	ClinVar	PMID:28492532
SKI	Dog	immunodeficiency 16		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Combined immunodeficiency due to OX40 deficiency	ClinVar	PMID:10862081 more ...
SKI	Dog	immunodeficiency 38		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Mendelian susceptibility to mycobacterial diseases due to complete ISG15 deficiency	ClinVar	PMID:10862081 more ...
SKI	Dog	intellectual disability		ISO	SKI (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:25741868 and PMID:28492532
SKI	Dog	Joubert syndrome 25		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Joubert syndrome 25	ClinVar	PMID:10862081 more ...
SKI	Dog	Neurodevelopmental Disorders		ISO	SKI (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:23023332 more ...
SKI	Dog	Peroxisome Biogenesis Disorder, Complementation Group 7		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Peroxisome biogenesis disorder and complementation group 7	ClinVar	PMID:10862081 more ...
SKI	Dog	Shprintzen-Goldberg Craniosynostosis		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Shprintzen-Goldberg syndrome	ClinVar	PMID:15979919 more ...
SKI	Dog	Shprintzen-Goldberg Craniosynostosis		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: Shprintzen-Goldberg syndrome	ClinVar	PMID:15979919 more ...
SKI	Dog	syndromic X-linked intellectual disability Turner type		ISO	SKI (Homo sapiens)	8554872	ClinVar Annotator: match by term: INTELLECTUAL DEVELOPMENTAL DISORDER more ...	ClinVar	PMID:25741868 and PMID:28492532
SKI	Dog	thoracic aortic aneurysm		ISO	SKI (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:15979919 more ...
SKI	Dog	thoracic aortic aneurysm		ISO	SKI (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:15979919 more ...
SKI	Dog	thoracic aortic aneurysm		ISO	SKI (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:15979919 more ...
SKI	Dog	thoracic aortic aneurysm		ISO	SKI (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:15979919 more ...
SKI	Dog	thoracic aortic aneurysm		ISO	SKI (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:15979919 more ...
SKI	Dog	thoracic aortic aneurysm		ISO	SKI (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:25741868 and PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
SKI	Dog	aortic aneurysm		ISO	SKI (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:23023332
SKI	Dog	Craniofacial Abnormalities		ISO	SKI (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:9284043
SKI	Dog	Musculoskeletal Abnormalities		ISO	SKI (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:9284043
SKI	Dog	neural tube defect		ISO	SKI (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:9284043

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
SKI	Dog	Shprintzen-Goldberg Craniosynostosis		ISO	SKI (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
SKI	Dog	anterior/posterior axis specification	acts_upstream_of_or_within	ISO	MGI:2177555	9068941	PMID:11731796	MGI	PMID:11731796
SKI	Dog	bone morphogenesis	acts_upstream_of_or_within	ISO	MGI:2177555	9068941	PMID:9284043	MGI	PMID:9284043
SKI	Dog	camera-type eye development	acts_upstream_of_or_within	ISO	MGI:2177555	9068941	PMID:11731796	MGI	PMID:11731796
SKI	Dog	camera-type eye morphogenesis	acts_upstream_of_or_within	ISO	MGI:2177555	9068941	PMID:17003410	MGI	PMID:17003410
SKI	Dog	cardiac muscle cell proliferation		ISO	Ski (Rattus norvegicus)	9068941		RGD	PMID:2447874 and REF_RGD_ID:151665807
SKI	Dog	embryonic limb morphogenesis	acts_upstream_of_or_within	ISO	MGI:2177555	9068941	PMID:12435627	MGI	PMID:12435627
SKI	Dog	face morphogenesis	acts_upstream_of_or_within	ISO	MGI:2177555	9068941	PMID:11731796 and PMID:9284043	MGI	PMID:11731796 and PMID:9284043
SKI	Dog	fibroblast proliferation	acts_upstream_of	ISO	MGI:2177555	9068941	PMID:11781823	MGI	PMID:11781823
SKI	Dog	lens morphogenesis in camera-type eye	acts_upstream_of_or_within	ISO	MGI:2177555	9068941	PMID:17003410	MGI	PMID:17003410
SKI	Dog	myelination in peripheral nervous system	acts_upstream_of_or_within	ISO	MGI:2177555	9068941	PMID:15312649	MGI	PMID:15312649
SKI	Dog	myotube differentiation	involved_in	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	myotube differentiation	acts_upstream_of_or_within	ISO	MGI:102780 and MGI:109339	9068941	PMID:19008232	MGI	PMID:19008232
SKI	Dog	myotube differentiation	acts_upstream_of_or_within	ISO	Ski (Mus musculus)	9068941	PMID:17352741	MGI	PMID:17352741
SKI	Dog	negative regulation of activin receptor signaling pathway	involved_in	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	negative regulation of BMP signaling pathway	involved_in	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	negative regulation of BMP signaling pathway	involved_in	IBA	FB:FBgn0039932 more ...	150520179		GO_Central	GO_REF:0000033
SKI	Dog	negative regulation of BMP signaling pathway	acts_upstream_of_or_within	ISO	MGI:88177	9068941	PMID:21937600	MGI	PMID:21937600
SKI	Dog	negative regulation of cell population proliferation	involved_in	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	negative regulation of fibroblast proliferation	acts_upstream_of_or_within	ISO	MGI:2177555	9068941	PMID:11781823	MGI	PMID:11781823
SKI	Dog	negative regulation of osteoblast differentiation	involved_in	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	negative regulation of Schwann cell proliferation	acts_upstream_of_or_within	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	negative regulation of SMAD protein signal transduction	involved_in	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	negative regulation of transcription by RNA polymerase II	involved_in	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	negative regulation of transcription by RNA polymerase II	acts_upstream_of_or_within	ISO	MGI:97275	9068941	PMID:7659522	MGI	PMID:7659522
SKI	Dog	negative regulation of transcription by RNA polymerase II	involved_in	IBA	MGI:106203 more ...	150520179		GO_Central	GO_REF:0000033
SKI	Dog	negative regulation of transcription by RNA polymerase III	involved_in	ISO	MGI:2177555	9068941	PMID:10049357	MGI	PMID:10049357
SKI	Dog	negative regulation of transforming growth factor beta receptor signaling pathway	acts_upstream_of_or_within	ISO	UniProtKB:P01137	9068941	PMID:15312649	MGI	PMID:15312649
SKI	Dog	negative regulation of transforming growth factor beta receptor signaling pathway	involved_in	IBA	MGI:106203 more ...	150520179		GO_Central	GO_REF:0000033
SKI	Dog	negative regulation of transforming growth factor beta receptor signaling pathway	acts_upstream_of_or_within	ISO	MGI:1201674	9068941	PMID:21937600	MGI	PMID:21937600
SKI	Dog	negative regulation of transforming growth factor beta receptor signaling pathway	involved_in	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	neural tube closure	acts_upstream_of_or_within	ISO	MGI:2177555	9068941	PMID:9284043	MGI	PMID:9284043
SKI	Dog	nose morphogenesis	acts_upstream_of_or_within	ISO	MGI:2177555	9068941	PMID:11731796	MGI	PMID:11731796
SKI	Dog	olfactory bulb development	acts_upstream_of_or_within	ISO	MGI:2177555	9068941	PMID:11731796	MGI	PMID:11731796
SKI	Dog	positive regulation of transcription by RNA polymerase II	acts_upstream_of_or_within	ISO	MGI:102780 and MGI:109339	9068941	PMID:19008232	MGI	PMID:19008232
SKI	Dog	positive regulation of transcription by RNA polymerase II	acts_upstream_of_or_within	ISO	Ski (Mus musculus)	9068941	PMID:17352741 and PMID:7659522	MGI	PMID:17352741 and PMID:7659522
SKI	Dog	retina development in camera-type eye	acts_upstream_of_or_within	ISO	MGI:2177555	9068941	PMID:17003410	MGI	PMID:17003410
SKI	Dog	roof of mouth development	acts_upstream_of_or_within	ISO	MGI:2177555	9068941	PMID:11731796	MGI	PMID:11731796
SKI	Dog	skeletal muscle fiber development	acts_upstream_of_or_within	ISO	MGI:2177555	9068941	PMID:9284043	MGI	PMID:9284043
SKI	Dog	somatic stem cell population maintenance	acts_upstream_of_or_within	ISO	Ski (Mus musculus)	9068941	PMID:19379700	MGI	PMID:19379700

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
SKI	Dog	centrosome	located_in	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	cytoplasm	is_active_in	IBA	FB:FBgn0039932 more ...	150520179		GO_Central	GO_REF:0000033
SKI	Dog	cytoplasm	located_in	ISO	Ski (Mus musculus)	9068941	PMID:12435627	MGI	PMID:12435627
SKI	Dog	nuclear body	located_in	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	nucleoplasm	located_in	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	nucleus	located_in	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	nucleus	is_active_in	IBA	FB:FBgn0085450 more ...	150520179		GO_Central	GO_REF:0000033
SKI	Dog	PML body	located_in	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	protein-containing complex	part_of	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	transcription regulator complex	part_of	IBA	MGI:2443473 more ...	150520179		GO_Central	GO_REF:0000033
SKI	Dog	transcription repressor complex	part_of	ISO	Ski (Mus musculus)	9068941	PMID:12435627	MGI	PMID:12435627

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
SKI	Dog	chromatin binding	enables	ISO	MGI:102780 and MGI:109339	9068941	PMID:19008232	MGI	PMID:19008232
SKI	Dog	DNA-binding transcription factor activity, RNA polymerase II-specific	enables	IBA	PANTHER:PTN000000299 more ...	150520179		GO_Central	GO_REF:0000033
SKI	Dog	DNA-binding transcription factor binding	enables	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	DNA-binding transcription repressor activity, RNA polymerase II-specific	enables	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	histone deacetylase inhibitor activity	enables	ISO	MGI:97275	9068941	PMID:17352741	MGI	PMID:17352741
SKI	Dog	identical protein binding	enables	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	protein binding	enables	ISO	UniProtKB:Q8VI24	9068941	PMID:22334647	IntAct	PMID:22334647
SKI	Dog	protein binding	enables	ISO	UniProtKB:Q13485 and UniProtKB:Q15796	9068941	PMID:26977879	IntAct	PMID:26977879
SKI	Dog	protein binding	enables	ISO	PR:Q61602	9068941	PMID:12435627	MGI	PMID:12435627
SKI	Dog	protein binding	enables	ISO	UniProtKB:Q13485 more ...	9068941	PMID:33961781	IntAct	PMID:33961781
SKI	Dog	protein binding	enables	ISO	UniProtKB:P84022 and UniProtKB:Q9HAZ2	9068941	PMID:19049980	UniProt	PMID:19049980
SKI	Dog	protein binding	enables	ISO	UniProtKB:Q15796	9068941	PMID:18729074	IntAct	PMID:18729074
SKI	Dog	protein binding	enables	ISO	UniProtKB:O75376 more ...	9068941	PMID:19032343	IntAct	PMID:19032343
SKI	Dog	protein binding	enables	ISO	UniProtKB:O75376 more ...	9068941	PMID:10049357	IntAct	PMID:10049357
SKI	Dog	protein binding	enables	ISO	UniProtKB:P84022 and UniProtKB:Q15796	9068941	PMID:22442258	IntAct	PMID:22442258
SKI	Dog	protein binding	enables	ISO	UniProtKB:Q13485	9068941	PMID:12419246 more ...	IntAct	PMID:12419246 more ...
SKI	Dog	protein binding	enables	ISO	UniProtKB:P97480 and UniProtKB:Q62231	9068941	PMID:19008232	UniProt	PMID:19008232
SKI	Dog	protein binding	enables	ISO	UniProtKB:Q9H7D7	9068941	PMID:34819669	IntAct	PMID:34819669
SKI	Dog	protein binding	enables	ISO	UniProtKB:O75376 more ...	9068941	PMID:14525983	IntAct	PMID:14525983
SKI	Dog	protein binding	enables	ISO	UniProtKB:P10070	9068941	PMID:12435627	UniProt	PMID:12435627
SKI	Dog	protein binding	enables	ISO	UniProtKB:Q9QUI1	9068941	PMID:12646588	IntAct	PMID:12646588
SKI	Dog	protein binding	enables	ISO	UniProtKB:Q6ZSG1	9068941	PMID:23610558	IntAct	PMID:23610558
SKI	Dog	protein binding	enables	ISO	UniProtKB:P12757-1	9068941	PMID:8514802	UniProt	PMID:8514802
SKI	Dog	protein binding	enables	ISO	UniProtKB:P97471	9068941	PMID:29072299	IntAct	PMID:29072299
SKI	Dog	protein binding	enables	ISO	UniProtKB:Q13573	9068941	PMID:9569025	UniProt	PMID:9569025
SKI	Dog	protein domain specific binding	enables	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	protein kinase binding	enables	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	RNA polymerase II cis-regulatory region sequence-specific DNA binding	enables	IBA	PANTHER:PTN000000299 and UniProtKB:P12757	150520179		GO_Central	GO_REF:0000033
SKI	Dog	SMAD binding	enables	IEA	InterPro:IPR014890	150520179		InterPro	GO_REF:0000002
SKI	Dog	SMAD binding	enables	IBA	FB:FBgn0039932 more ...	150520179		GO_Central	GO_REF:0000033
SKI	Dog	SMAD binding	enables	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	transcription corepressor activity	enables	ISO	MGI:2177555	9068941	PMID:10049357	MGI	PMID:10049357
SKI	Dog	ubiquitin protein ligase binding	enables	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107
SKI	Dog	zinc ion binding	enables	IEA	UniProtKB:P12755 and ensembl:ENSP00000367797	150520179		Ensembl	GO_REF:0000107

Imported Annotations - PID (archival)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
SKI	Dog	Bone morphogenetic proteins signaling pathway		ISO	SKI (Homo sapiens)	9068941		PID	PID:200144

PMID:22301074	PMID:30032202

SKI
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	57,144,178 - 57,216,385 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	57,145,825 - 57,214,403 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	57,222,188 - 57,292,743 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	57,347,931 - 57,418,465 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	57,347,008 - 57,415,963 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	57,339,163 - 57,409,707 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	57,231,570 - 57,302,105 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	57,621,138 - 57,691,705 (+)	NCBI		UU_Cfam_GSD_1.0

SKI
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	2,228,319 - 2,310,213 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	2,227,388 - 2,310,213 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	2,159,758 - 2,241,652 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	2,149,994 - 2,229,316 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	2,192,295 - 2,271,618	NCBI
Celera	1	349,404 - 432,073 (-)	NCBI		Celera
Cytogenetic Map	1	p36.33-p36.32	NCBI
HuRef	1	1,435,430 - 1,516,081 (+)	NCBI		HuRef
CHM1_1	1	2,147,183 - 2,227,893 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	1,663,728 - 1,746,139 (+)	NCBI		T2T-CHM13v2.0

Ski
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	155,238,532 - 155,307,536 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	155,238,532 - 155,307,049 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	155,154,075 - 155,222,535 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	155,154,075 - 155,222,592 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	154,528,184 - 154,596,644 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	154,001,141 - 154,066,320 (-)	NCBI		MGSCv36	mm8
Celera	4	157,427,881 - 157,496,342 (-)	NCBI		Celera
Cytogenetic Map	4	E2	NCBI
cM Map	4	86.17	NCBI

Ski
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	170,995,851 - 171,064,957 (-)	NCBI		GRCr8
mRatBN7.2	5	165,713,525 - 165,782,134 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	165,714,093 - 165,782,733 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	5	172,556,196 - 172,623,878 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	172,559,135 - 172,623,899 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	176,014,988 - 176,083,718 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	171,953,650 - 171,987,624 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	5	163,919,213 - 163,986,092 (-)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

Ski
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955486	8,857,693 - 8,921,821 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955486	8,857,693 - 8,921,821 (-)	NCBI	ChiLan1.0	ChiLan1.0

SKI
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	225,951,867 - 226,037,094 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	224,613,373 - 224,698,166 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	944,428 - 1,029,695 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	2,091,620 - 2,174,080 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	2,091,620 - 2,174,080 (+)	Ensembl	panpan1.1		panPan2

Ski
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	28,191,284 - 28,243,439 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936737	1,222,341 - 1,276,631 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936737	1,223,653 - 1,274,664 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SKI
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	64,188,236 - 64,242,560 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	64,188,265 - 64,242,596 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

SKI
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	129,243,033 - 129,324,162 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	129,242,445 - 129,324,138 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666054	33,591,348 - 33,675,241 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ski
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624818	7,673,203 - 7,736,255 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624818	7,674,184 - 7,736,249 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in SKI
431 total Variants

Assembly: CanFam3.1

Chromosome	Start Pos	End Pos	Reference Nucleotide	Variant Nucleotide	Variant Type	Strain	Variant Page
5	57212346	57212347	T	C	snv	Leonberger (LB111)	View more Information

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10


RefSeq Transcripts	XM_014113853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476541	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476542	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476543	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476545	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476546	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476548	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522389	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522418	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522425	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522428	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038537684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038537685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038537686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038537687	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038537688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038537689	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038537690	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038601848	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038601849	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038601850	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038601851	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038601852	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038601853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038601854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666422	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666423	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666424	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666425	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666426	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666427	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666428	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000030821 ⟹ ENSCAFP00000028655

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	5	57,145,825 - 57,214,403 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845030062 ⟹ ENSCAFP00845023582

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	5	57,347,008 - 57,415,963 (+)	Ensembl

RefSeq Acc Id:

XM_014113853 ⟹ XP_013969328

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	57,144,178 - 57,216,385 (+)	NCBI
Dog10K_Boxer_Tasha	5	57,222,188 - 57,292,743 (+)	NCBI

Sequence:

show sequence

ATGTGGGGTCCCCGTCCTGCCGGATCCGCGAGGTGTGCGGTGGAGGCCGCGCAGGCCGCCGTCCTGCCCGCCCCTCCGCGGGTCTGCGGTTGTGGCGGGGGCCGCGTGTGGGTTTCTGGGCCCGGCAG
CGGTGACGGCGGCGACGGCGGCGGCGGCAGCACGGGCGCCTTCCCAGCCGCGCAGGAAGCGGCCTCGGCCGGAAGGGGGGGCCCCGGGCGCCGCCACTGCCCCCGCCGAGCGCCCTTCCGGCGGGCGG
GGCCGAGCAGCGCCGAGCGGGGCCGAGCGGCACCGAGCGGGACCGAGCGGGGCCGAGCGGGGCCGAGCGGCGCCGAGCGGGGCCGAGCGGGGCCGAGTCCCGGGCGGGCGGGGCCGAGCGGAGCCGAA
TCGCGGCCGAGCGGAGCCGAGTTCCTGGCGGGCCGGCCCGAAGGCGGCCGAGTCGAAACGAGCCGCGGGCTGCAGAAGACGCTGGAGCAGTTCCACCTGAGCTCTATGAGCTCGCTGGGCGGCCCGGC
CGCCTTCTCGGCGCGCTGGGCGCAGGAGGCCTACAAGAAGGAGAGCGCCAAGGAGGCCAGCGCGGCTGCCGTTCCGGCGCCGGTCCCCGCGGCCGCCGAGCCGCCGCCCGTGCTGCACCTGCCAGCCA
TCCAGCCGCCGCCGCCCGTGCTCCCCGGGCCCTTCTTCATGCCGTCCGACCGCTCCACTGAGCGCTGCGAGACCGTGCTGGAGGGCGAGACCATCTCGTGCTTCGTGGTGGGCGGCGAGAAGCGCCTG
TGCCTGCCGCAGATCCTCAACTCGGTGCTGCGCGACTTCTCGCTGCAGCAGATCAACTCGGTGTGCGACGAGCTGCACATCTATTGCTCGCGCTGCACGGCGGACCAGTTGGAGATCCTCAAAGTCAT
GGGCATCCTGCCCTTCTCGGCGCCCTCGTGCGGGCTCATCACCAAGACGGACGCCGAGCGCCTGTGCAACGCGCTGCTATACGGCGGCGCCTACCCGCCGCCCTGCAAGAAGGAGCTGGCCGCCAGTC
TGGCGCTGGGCCTGGAGCTCAGCGAGCGCAGCGTGCGTGTGTACCACGAGTGCTTCGGCAAGTGCAAGGGGCTGCTGGTGCCCGAGCTCTACAGCAGCCCGAGTGCCGCATGCATCCAGTGCCTCGAC
TGCCGCCTCATGTACCCCCCGCACAAGTTCGTCGTGCACTCGCACAAGGCGCTGGAGAACCGGACCTGCCACTGGGGATTCGACTCGGCCAACTGGCGGGCGTACATCCTGCTGAGCCAGGACTACAC
GGGCAAGGAGGAGCAGGCACGCCTTGGCCGCTGCCTGGACGACGTGAAGGAGAAGTTTGACTATGGCAACAAGTACAAGCGGCGGGTGCCCCGGGTCTCCTCCGAGCCCCCGGCCTCCATCCGGAAAA
CAGATGACGCCCCCTCACAACTCCCCCCGTCTTCTGAGAAGGACAAACAGTCTGGCTGGCTGCGGACCCTGGCTGGCCCCTCCAGCAAGAGCCTTGGCTGCGTTCACCCTCGCCAGCGCCTCTCCGCT
TTCCGACCCTGGTCCCCCGCGGTGTCTACGAGTGACAAAGAGCTCTCCCCACACCTCCCAGCCCTGATTCGAGACAGCTTTTACTCCTACAAGAGCTTCGAGACCGGTGTGGCCCCCAATGTGGCCCT
GGCGCCGCCTGCCCAGCAGAAGGTTGTGAGCAGCCCACCATGTGCCACCGTTGTCTCCCGGGCCACTGAGCCTCTAGCCACCTGCCTCCAGCCACGGAAGCGGAAGCTGACCGTGGACACTCCTGGAG
CCCCAGAGACACCAGCGCCCGCAGCTGCCCCTGAGGATGACAAGGACTCAGAAGCCGAGGTGGAGGTGGAGAGCAGGGAGGAATTCACCTCTTCCCTGTCTTCGCTCTCGTCCCCATCCCTCACCTCA
TCCAGCTCTGCCAAGGACCTGAGCTCCCCAGGTGTGCATGCCCCCCCTGCTGTGCCCCCCGCCCCTGAGGTGGCAGCCCCTGCAGACACCACGAGTGGTGGGCTGGAGGCAGAGTTGGAGCACCTGCG
ACAGGCCCTGGAGGGCGGCCTGGACACCAAGGAAGCCAAAGAGAAGTTCCTGCACGAGGTGGTGAAGATGCGCGTGAAGCAGGAGGAGAAGCTGAGTGCCGCGCTGCAAGCCAAGCGCAGCCTCCACC
AGGAGCTGGAGTTTCTGCGTGTGGCCAAGAAAGAGAAGCTGCGGGAAGCCACAGAGGCCAAGCGCAACCTGCGGAAGGAGATTGAGCGCCTTCGAGCTGAGAATGAAAAGAAGATGAGAGAGGCCAAT
GAGTCCCGACTGCGTCTAAAGCGGGAGCTGGAGCAGGCACGCCAGGTGCGGGTGTGTGACAAGGGCTGTGAGGCCGGCCGCCTGCGCGCCAAGTACTCGGCCCAGATCGAGGACCTACAGGTGAAGCT
GCAGCACGCAGAAGCGGACCGTGAGCAGCTCCGGGCTGACCTACTTCGGGAGCGCGAGGCCCGGGAGCATCTGGAAAAGGTGGTGAAGGAGCTGCAGGAGCAGCTGTGGCCGCGGCCCCGGCCCGAGG
CAGCGGGCAGCGAGAGCACGGCTGAGCTGGAGCCCTAGTGGATCCCACTGTGTGCCGCTGCGGTGCGGACGCCACAGGGAGCAGGCGGGCAGGCAGCCCAGGCCAGCCGGGGGCTCGGGGGCTCTGCG
TGCCGGCGGGCCCGCCCCCACGTCCACATAGCACAACGTCTTACTGTGCCTCTAACCAAGCGAGTGTTTGGAACCACATACTTTTGGAATCCACTGCAAAATTTTCTACTGGCCAAGTTTGAGTGTGC
AAGCCGGGTTCCCAGCTGCGGCTGGAGTGGAGGCTCCAGGCCCGCAGAGGGCCTCTGCTTGCTGGAACGTTCTAACATTTACATTTTTGTTATAAGCTATTTAAAACCAATAAGAAGACTTGATACTC
AGAAAAAAAATCAACAGGTTTTTTAATGACTAACTTTTAAAAGCCCCACCAACACGTGATGCCATCCTAGGACCTGCCGGGGCGCAGCCACCCCGCCCCTTGAAGCCATCGCAGCTCGTCCGTGGCCG
AGCAAGGACAGGGAGGGTTTTCTCCAGAGTCTATTTTTTCAACGACGAGGACCCGGGCCTCCTGTGCCGCCGCTGGGGAAGAGCAGGGAGGCCGCCACAAGCCGCAAGCCGTGCCGAGCCAGGCCACC
ACCTCCGCCTGCCTGCCCACCCGGCGGCTCCAGAGGGGGCTCAGTGCCGGGCCCGCCCCACCGCGGCCGCCCTCCCTAGGCCACTCCTGTCGCGTTGGGACCGAGGCCGCGGTGTTGGAACAAAACAG
CATTACTTCACTTTTTTTCTTTTTGTTTGTTCATTTAAACGTATATTTAGAACTGCACTTTGTCAAAAATCTTCCCTTCTCTTTTTATTCCCCAGTTAACTGAGGTTTTTACTTTTCAAATATCGCAG
CCCCATTTATAGAGGAGTCCACATCCTAAGTGCTCGAGTGTTTAGAAACCCCCTCTGGTGCTTGGTTGAACAAGGGAATCACAAAACGAAAATGCAAAAACTGACTTGGGGGGTAGTCCTGTGCCTTC
CAGCATCTTGTACAGCAAACCCTGACTTGTCTTCTTACCCCCGAGATACTGTCTTCAGTAGCGATGGAATCTGCCACTATCAGAATAAGTTACTTGCATTTATTCCAAATAATCTCGTTTACTCTCAA
CTGTTCATGCAAATTGTATAAGGTTTTTTATGCCCAAGCTTGAAAAAATGATTTTCCAGTAGACGAGAGGCGGCTCCCCATCCTGAATTACGGTATTTATGTATGTGAGGAAGATCTTACCAGAATTC
TTCGCTTGACCCCGTTCTAACACCGAGGCAGCTGTGAGCGCGGACGGAGGGGGAGACGGCTGGCACAGGTACAGGCGCCGCCTGCTGCAGCGCCCACCAGAGGTCTGGTGATGACATCATCTGCGGGG
CTCCAGCCCGTGGTTTACGGGGGGCAGGGCGCAGGTGCTGCTGGACCCCCCCTTCTAAAGTGCAATGCAAAAGGGACATCATATATATGCAGCGTTTGTTGGGATTTTTTTTTTTTTTTTTGCTTTTG
TTTTTCTTTTGCAGTTCCAGAATTTGTATGCATGGAATGTTAACCCTCTGCCGTATGTGTCCCCATTGATGGGCATTATTACCGGGTCCCGTGAGGGGCCTGTGTACTACACAACACTCAGAATGCTG
TGTCCGGCCATGTTTCTCCGGAGTTGTTTTCTCAGTCATTTCTTCAAGGGAAACTAAATGATTCAGTTGGAACAGAGCTTCATGTGTGCCCGTGTGCTTCTGTGTGGCTGTGCTCTGTTGCCAAGTCT
GAAAGTCGGGAGAGATCTAGGGGCCCAGGGCTACCTGTTCACTGTTCGGTTTGGGGCTCCGGAGGGTGGGGAGCTGCTCTGAGCTGTGTCAGGGCCCCGTGCTGCCCACCTCTGCTCACCAACTCCAC
TACTGGGTCCTTGCCTCCTAGTGGCAGCTCTGTCCCGGAAGGTCAGGGAGAGCTGGCCGAGCCTGGGCAGCTCGGGGGCAACCCAGGCCCGTCCCTGCCGTCCCTGCCGTCCCTGCCCAAGGGGCCCA
TGGCCCACCAGAGCTGGGGTGGCTCCCTCTGGTCCCAGGCAGCTCTCCCTGGGTGAAGTGGGTGAGGAGATGAGGGGGCGTCGGCTCGTGCTGGCTGCTTCCATCCTTCCATCCTCGGGGGAAGGGGG
CCTGGGTCCCAGGAGCCTGAGACCTGGCTTCCGTTCGTGCAGCTGTGTTTCAGTTTCCCTGCAGAAGGGAGGAAAGGGATCTATCCTGTTGGCTGTTGACTCTCCCTGTGTGTAATATCCATTATTCC
AAATGATTGTGTATTCAGTTTAATTACTCATTATTTCTATGCTGAAAGAGGATTTTTAACGAAGGGAAAAACAACAGCAATAACATTCATATCTTTGGAGCAGCTAACTCACACACATAATATCCTGC
TTTTCGTACAGAACTAGCCCCGTGTAAAAACGGTCCCCCTGTAAATACCGTTCCTTGACACTGTTGTATCACACGCGTGTACGGTGGTTCCTTTTTCAGAAACTTTTCTTACCTGGTAGTTGTCTCGT
TTTCTGGGTTGTTTTTAACTGAGGAAGAACAGCTCACCTGCCGGAGGGACGGACCCCCCCGCCAGCCCCTACGGCGCCCCCGGGCCCTGTCCTCCCACCCCTGCCCGCCCACTGCGTCCACCAGGCTC
AAGAGGCCGTTTTGTTCTTGCTTTAAGTCAGGAGTCACAAGCGACATTTTTTTTCAGTTAAGGAAAAAAACACAGCTCTACCTTTATATCCGCCAGGAGCGTCTGCACCGCTGTTCCCTCCTTTGCTG
CTGCTAATGACAACATGATGACTTACTCTACTATCGAAAACTATTTTTATGTAATTAATGTATGCTTTCTTGTTTATAAATGCCTGATTTAAAAAGAAAAAAGAAAAAGCTTGGCATATTTATCTACT
TCGCTGTGTACCCGTTAGTCCTTTGGCGCCCCTCCCCCAGACAGATGACCTTGTACAATAAAGGACTTTGAGAGTA

hide sequence

RefSeq Acc Id:

XM_038476541 ⟹ XP_038332469

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	57,339,163 - 57,409,707 (+)	NCBI

RefSeq Acc Id:

XM_038476542 ⟹ XP_038332470

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	57,339,163 - 57,409,707 (+)	NCBI

RefSeq Acc Id:

XM_038476543 ⟹ XP_038332471

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	57,339,163 - 57,409,707 (+)	NCBI

RefSeq Acc Id:

XM_038476545 ⟹ XP_038332473

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	57,339,163 - 57,409,707 (+)	NCBI

RefSeq Acc Id:

XM_038476546 ⟹ XP_038332474

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	57,339,163 - 57,409,707 (+)	NCBI

RefSeq Acc Id:

XM_038476547 ⟹ XP_038332475

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	57,339,163 - 57,409,707 (+)	NCBI

RefSeq Acc Id:

XM_038476548 ⟹ XP_038332476

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	57,339,163 - 57,409,707 (+)	NCBI

RefSeq Acc Id:

XM_038522389 ⟹ XP_038378317

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	57,222,188 - 57,292,743 (+)	NCBI

RefSeq Acc Id:

XM_038522399 ⟹ XP_038378327

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	57,222,188 - 57,292,743 (+)	NCBI

RefSeq Acc Id:

XM_038522409 ⟹ XP_038378337

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	57,222,188 - 57,292,743 (+)	NCBI

RefSeq Acc Id:

XM_038522418 ⟹ XP_038378346

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	57,222,188 - 57,292,743 (+)	NCBI

RefSeq Acc Id:

XM_038522425 ⟹ XP_038378353

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	57,222,188 - 57,292,743 (+)	NCBI

RefSeq Acc Id:

XM_038522428 ⟹ XP_038378356

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	57,222,188 - 57,292,743 (+)	NCBI

RefSeq Acc Id:

XM_038537684 ⟹ XP_038393612

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	57,621,138 - 57,691,705 (+)	NCBI

RefSeq Acc Id:

XM_038537685 ⟹ XP_038393613

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	57,621,138 - 57,691,705 (+)	NCBI

RefSeq Acc Id:

XM_038537686 ⟹ XP_038393614

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	57,621,138 - 57,691,705 (+)	NCBI

RefSeq Acc Id:

XM_038537687 ⟹ XP_038393615

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	57,621,138 - 57,691,705 (+)	NCBI

RefSeq Acc Id:

XM_038537688 ⟹ XP_038393616

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	57,621,138 - 57,691,705 (+)	NCBI

RefSeq Acc Id:

XM_038537689 ⟹ XP_038393617

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	57,621,138 - 57,691,705 (+)	NCBI

RefSeq Acc Id:

XM_038537690 ⟹ XP_038393618

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	57,621,138 - 57,691,705 (+)	NCBI

RefSeq Acc Id:

XM_038601848 ⟹ XP_038457776

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	57,231,570 - 57,302,105 (+)	NCBI

RefSeq Acc Id:

XM_038601849 ⟹ XP_038457777

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	57,231,570 - 57,302,105 (+)	NCBI

RefSeq Acc Id:

XM_038601850 ⟹ XP_038457778

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	57,231,570 - 57,302,105 (+)	NCBI

RefSeq Acc Id:

XM_038601851 ⟹ XP_038457779

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	57,231,570 - 57,302,105 (+)	NCBI

RefSeq Acc Id:

XM_038601852 ⟹ XP_038457780

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	57,231,570 - 57,302,105 (+)	NCBI

RefSeq Acc Id:

XM_038601853 ⟹ XP_038457781

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	57,231,570 - 57,302,105 (+)	NCBI

RefSeq Acc Id:

XM_038601854 ⟹ XP_038457782

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	57,231,570 - 57,302,105 (+)	NCBI

RefSeq Acc Id:

XM_038666422 ⟹ XP_038522350

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	57,347,931 - 57,418,465 (+)	NCBI

RefSeq Acc Id:

XM_038666423 ⟹ XP_038522351

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	57,347,931 - 57,418,465 (+)	NCBI

RefSeq Acc Id:

XM_038666424 ⟹ XP_038522352

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	57,347,931 - 57,418,465 (+)	NCBI

RefSeq Acc Id:

XM_038666425 ⟹ XP_038522353

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	57,347,931 - 57,418,465 (+)	NCBI

RefSeq Acc Id:

XM_038666426 ⟹ XP_038522354

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	57,347,931 - 57,418,465 (+)	NCBI

RefSeq Acc Id:

XM_038666427 ⟹ XP_038522355

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	57,347,931 - 57,418,465 (+)	NCBI

RefSeq Acc Id:

XM_038666428 ⟹ XP_038522356

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	57,347,931 - 57,418,465 (+)	NCBI


Protein RefSeqs	XP_013969328	(Get FASTA)	NCBI Sequence Viewer
	XP_038332469	(Get FASTA)	NCBI Sequence Viewer
	XP_038332470	(Get FASTA)	NCBI Sequence Viewer
	XP_038332471	(Get FASTA)	NCBI Sequence Viewer
	XP_038332473	(Get FASTA)	NCBI Sequence Viewer
	XP_038332474	(Get FASTA)	NCBI Sequence Viewer
	XP_038332475	(Get FASTA)	NCBI Sequence Viewer
	XP_038332476	(Get FASTA)	NCBI Sequence Viewer
	XP_038378317	(Get FASTA)	NCBI Sequence Viewer
	XP_038378327	(Get FASTA)	NCBI Sequence Viewer
	XP_038378337	(Get FASTA)	NCBI Sequence Viewer
	XP_038378346	(Get FASTA)	NCBI Sequence Viewer
	XP_038378353	(Get FASTA)	NCBI Sequence Viewer
	XP_038378356	(Get FASTA)	NCBI Sequence Viewer
	XP_038393612	(Get FASTA)	NCBI Sequence Viewer
	XP_038393613	(Get FASTA)	NCBI Sequence Viewer
	XP_038393614	(Get FASTA)	NCBI Sequence Viewer
	XP_038393615	(Get FASTA)	NCBI Sequence Viewer
	XP_038393616	(Get FASTA)	NCBI Sequence Viewer
	XP_038393617	(Get FASTA)	NCBI Sequence Viewer
	XP_038393618	(Get FASTA)	NCBI Sequence Viewer
	XP_038457776	(Get FASTA)	NCBI Sequence Viewer
	XP_038457777	(Get FASTA)	NCBI Sequence Viewer
	XP_038457778	(Get FASTA)	NCBI Sequence Viewer
	XP_038457779	(Get FASTA)	NCBI Sequence Viewer
	XP_038457780	(Get FASTA)	NCBI Sequence Viewer
	XP_038457781	(Get FASTA)	NCBI Sequence Viewer
	XP_038457782	(Get FASTA)	NCBI Sequence Viewer
	XP_038522350	(Get FASTA)	NCBI Sequence Viewer
	XP_038522351	(Get FASTA)	NCBI Sequence Viewer
	XP_038522352	(Get FASTA)	NCBI Sequence Viewer
	XP_038522353	(Get FASTA)	NCBI Sequence Viewer
	XP_038522354	(Get FASTA)	NCBI Sequence Viewer
	XP_038522355	(Get FASTA)	NCBI Sequence Viewer
	XP_038522356	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000028655.6
	ENSCAFP00030002525.1
	ENSCAFP00845023582
	ENSCAFP00845023582.1

RefSeq Acc Id:	XP_013969328 ⟸ XM_014113853
- Peptide Label:	isoform X7
- UniProtKB:	A0A8C0KBG4 (UniProtKB/TrEMBL), A0A8P0SN90 (UniProtKB/TrEMBL), A0A8C0LZ71 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWGPRPAGSARCAVEAAQAAVLPAPPRVCGCGGGRVWVSGPGSGDGGDGGGGSTGAFPAAQEAASAGRGGPGRRHCPRRAPFRRAGPSSAERGRAAPSGTERGRAGPSGAERGRAGPSPGRAGPSGAE SRPSGAEFLAGRPEGGRVETSRGLQKTLEQFHLSSMSSLGGPAAFSARWAQEAYKKESAKEASAAAVPAPVPAAAEPPPVLHLPAIQPPPPVLPGPFFMPSDRSTERCETVLEGETISCFVVGGEKRL CLPQILNSVLRDFSLQQINSVCDELHIYCSRCTADQLEILKVMGILPFSAPSCGLITKTDAERLCNALLYGGAYPPPCKKELAASLALGLELSERSVRVYHECFGKCKGLLVPELYSSPSAACIQCLD CRLMYPPHKFVVHSHKALENRTCHWGFDSANWRAYILLSQDYTGKEEQARLGRCLDDVKEKFDYGNKYKRRVPRVSSEPPASIRKTDDAPSQLPPSSEKDKQSGWLRTLAGPSSKSLGCVHPRQRLSA FRPWSPAVSTSDKELSPHLPALIRDSFYSYKSFETGVAPNVALAPPAQQKVVSSPPCATVVSRATEPLATCLQPRKRKLTVDTPGAPETPAPAAAPEDDKDSEAEVEVESREEFTSSLSSLSSPSLTS SSSAKDLSSPGVHAPPAVPPAPEVAAPADTTSGGLEAELEHLRQALEGGLDTKEAKEKFLHEVVKMRVKQEEKLSAALQAKRSLHQELEFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMREAN ESRLRLKRELEQARQVRVCDKGCEAGRLRAKYSAQIEDLQVKLQHAEADREQLRADLLREREAREHLEKVVKELQEQLWPRPRPEAAGSESTAELEP hide sequence

Ensembl Acc Id:

ENSCAFP00000028655 ⟸ ENSCAFT00000030821

RefSeq Acc Id:	XP_038332469 ⟸ XM_038476541
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038332475 ⟸ XM_038476547
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038332471 ⟸ XM_038476543
- Peptide Label:	isoform X3

Protein Domains

c-SKI SMAD4-binding

RGD ID:

13683355

Promoter ID:

EPDNEW_C1423

Type:

initiation region

Name:

SKI_1

Description:

SKI proto-oncogene

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	57,144,428 - 57,144,488	EPDNEW

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000019387	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030001586	UniProtKB/TrEMBL
	ENSCAFG00845016973	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000030821.7	UniProtKB/TrEMBL
	ENSCAFT00030002841.1	UniProtKB/TrEMBL
	ENSCAFT00845030062	ENTREZGENE
	ENSCAFT00845030062.1	UniProtKB/TrEMBL
Gene3D-CATH	3.10.260.20	UniProtKB/TrEMBL
	3.10.390.10	UniProtKB/TrEMBL
InterPro	c-SKI_SMAD4-bd_dom	UniProtKB/TrEMBL
	DHD_Ski	UniProtKB/TrEMBL
	DNA-bd_dom_put_sf	UniProtKB/TrEMBL
	SAND-like_dom_sf	UniProtKB/TrEMBL
	SKI/SNO/DAC	UniProtKB/TrEMBL
	Ski_DNA-bd_sf	UniProtKB/TrEMBL
	Tscrpt_reg_SKI_SnoN	UniProtKB/TrEMBL
NCBI Gene	SKI	ENTREZGENE
PANTHER	PTHR10005	UniProtKB/TrEMBL
	PTHR10005:SF15	UniProtKB/TrEMBL
Pfam	c-SKI_SMAD_bind	UniProtKB/TrEMBL
	Ski_Sno	UniProtKB/TrEMBL
SMART	c-SKI_SMAD_bind	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46955	UniProtKB/TrEMBL
	SSF63763	UniProtKB/TrEMBL
UniProt	A0A8C0KBG4	ENTREZGENE
	A0A8C0LZ71	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3P330	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0SN90	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:46198	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - PID (archival)