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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:ovary adenocarcinoma
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Accession:DOID:3713 term browser browse the term
Definition:An ovarian carcinoma that derives_from epithelial cells of glandular origin. (DO)
Synonyms:exact_synonym: ovarian adenoacanthoma;   ovarian adenocarcinoma
 related_synonym: adenocarcinoma of the ovary
 primary_id: RDO:9002507
 xref: EFO:0006460;   NCI:C129858;   NCI:C7700
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
ovary adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnd3 cyclin D3 disease_progression ISO RGD PMID:17885491 RGD:2316011 NCBI chr17:47,815,976...47,910,614
Ensembl chr17:47,815,976...47,910,616 		JBrowse link
G Cyp24a1 cytochrome P450, family 24, subfamily a, polypeptide 1 ISO mRNA:increased expression:ovary (human) RGD PMID:16180015 RGD:151361183 NCBI chr 2:170,324,877...170,339,065
Ensembl chr 2:170,324,628...170,339,065 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO ClinVar Annotator: match by term: Ovarian adenocarcinoma ClinVar PMID:15457249 PMID:18339846 NCBI chr11:98,303,310...98,328,542
Ensembl chr11:98,303,296...98,328,542 		JBrowse link
G Pramex1 PRAME like, X-linked 1 severity ISO mRNA, protein:increased expression:female gonad (human) RGD PMID:18709641 RGD:11535054 NCBI chr  X:134,513,662...134,528,437
Ensembl chr  X:134,513,751...134,528,454 		JBrowse link
ovarian serous cystadenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:26619011 NCBI chr 2:121,978,168...121,983,563
Ensembl chr 2:121,978,167...121,983,564 		JBrowse link
G Birc3 baculoviral IAP repeat-containing 3 exacerbates ISO mRNA:increased expression:ovary (human) RGD PMID:31964418 RGD:153344516 NCBI chr 9:7,848,698...7,873,199
Ensembl chr 9:7,848,700...7,873,187 		JBrowse link
G Braf Braf transforming gene ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:24033266 PMID:24446311 PMID:25157968 PMID:25741868 PMID:26619011 More... NCBI chr 6:39,580,171...39,702,592
Ensembl chr 6:39,580,171...39,702,397 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:22908275 PMID:26619011 NCBI chr11:98,303,310...98,328,542
Ensembl chr11:98,303,296...98,328,542 		JBrowse link
G Fbxw7 F-box and WD-40 domain protein 7 ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:25741868 PMID:26619011 NCBI chr 3:84,721,901...84,886,505
Ensembl chr 3:84,722,575...84,886,505 		JBrowse link
G Hras Harvey rat sarcoma virus oncogene ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:11150980 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 More... NCBI chr 7:140,770,839...140,773,938
Ensembl chr 7:140,769,018...140,773,918 		JBrowse link
G Lrrc56 leucine rich repeat containing 56 ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:11150980 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 More... NCBI chr 7:140,774,024...140,789,968
Ensembl chr 7:140,774,070...140,789,968 		JBrowse link
G Nras neuroblastoma ras oncogene ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:1654209 PMID:2278970 PMID:2674680 PMID:3122217 PMID:6587382 More... NCBI chr 3:102,965,643...102,975,230
Ensembl chr 3:102,965,601...102,975,230 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 More... NCBI chr 3:32,451,203...32,520,256
Ensembl chr 3:32,451,820...32,522,635 		JBrowse link
G Ppp2r1a protein phosphatase 2, regulatory subunit A, alpha ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:25741868 PMID:26168268 PMID:26619011 PMID:28492532 PMID:31687265 More... NCBI chr17:21,165,716...21,186,167
Ensembl chr17:21,165,573...21,186,178 		JBrowse link
G Trp53 transformation related protein 53 ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:124622 PMID:253702 PMID:960674 PMID:1349175 PMID:1359493 More... NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
ovary serous adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A ISO ClinVar Annotator: match by term: Primary low grade serous adenocarcinoma of ovary ClinVar NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080 		JBrowse link
G Brca1 breast cancer 1, early onset ISO ClinVar Annotator: match by term: Ovarian serous surface papillary adenocarcinoma ClinVar PMID:16084575 PMID:16455195 PMID:16949048 PMID:17100994 PMID:19656164 More... NCBI chr11:101,379,587...101,442,808
Ensembl chr11:101,379,590...101,442,781 		JBrowse link
G Brca2 breast cancer 2, early onset ISO ClinVar Annotator: match by term: Ovarian serous surface papillary adenocarcinoma ClinVar PMID:16793542 PMID:18704680 PMID:25741868 NCBI chr 5:150,445,759...150,493,612
Ensembl chr 5:150,446,095...150,493,794 		JBrowse link
G Bsg basigin ISO protein:increased expression:ovary RGD PMID:16633062 RGD:2289053 NCBI chr10:79,540,192...79,547,813
Ensembl chr10:79,540,325...79,547,803 		JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog ISO ClinVar Annotator: match by term: Primary low grade serous adenocarcinoma of ovary ClinVar PMID:2278970 PMID:3122217 PMID:7773929 PMID:8439212 PMID:12460918 More... NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965 		JBrowse link
G Trp53 transformation related protein 53 ISO DNA, protein:loss of heterozygosity, increased expression:ovary RGD PMID:1310251 RGD:2290540 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18297
    disease of cellular proliferation 7493
      cancer 5431
        cell type cancer 3734
          carcinoma 3200
            adenocarcinoma 1709
              ovary adenocarcinoma 19
                endometrioid ovary carcinoma 0
                ovarian clear cell adenocarcinoma 0
                ovarian cystadenocarcinoma + 11
                ovarian mucinous adenocarcinoma 0
                ovary serous adenocarcinoma + 16
                rete ovarii adenocarcinoma 0
Path 2
Term Annotations click to browse term
  disease 18297
    disease of anatomical entity 15629
      Urogenital Diseases 4894
        Female Urogenital Diseases and Pregnancy Complications 2429
          Female Urogenital Diseases 1966
            female reproductive system disease 1963
              Adnexal Diseases 908
                ovarian disease 899
                  Ovarian Neoplasms 583
                    ovarian cancer 458
                      ovary epithelial cancer 127
                        malignant ovarian surface epithelial-stromal neoplasm 103
                          ovarian carcinoma 103
                            ovary adenocarcinoma 19
                              endometrioid ovary carcinoma 0
                              ovarian clear cell adenocarcinoma 0
                              ovarian cystadenocarcinoma + 11
                              ovarian mucinous adenocarcinoma 0
                              ovary serous adenocarcinoma + 16
                              rete ovarii adenocarcinoma 0
paths to the root