RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
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Ace
angiotensin I converting enzyme
severity treatment susceptibility
ISO IMP
DNS:insertion/deletion:intron: (rs1799752) DNA:insertion/deletion:intron 16:
RGD
PMID:19752885 PMID:14757777 PMID:19021695
RGD:40400704 , RGD:40400723 , RGD:40400906
NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131
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Adra1d
adrenoceptor alpha 1D
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 3:118,793,356...118,809,354
Ensembl chr 3:118,793,346...118,809,354
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Akip1
A-kinase interacting protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 1:163,734,730...163,743,648
Ensembl chr 1:163,734,798...163,743,648
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Alox15
arachidonate 15-lipoxygenase
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874
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Ankrd23
ankyrin repeat domain 23
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 9:38,773,234...38,778,705
Ensembl chr 9:38,773,240...38,779,839
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Apln
apelin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr X:127,180,801...127,213,567
Ensembl chr X:127,203,823...127,213,391
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Cdc25b
cell division cycle 25B
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 3:118,407,127...118,417,272
Ensembl chr 3:118,407,128...118,417,272
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Col4a1
collagen type IV alpha 1 chain
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412
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Col6a1
collagen type VI alpha 1 chain
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
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Col8a1
collagen type VIII alpha 1 chain
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr11:42,776,851...42,906,432
Ensembl chr11:42,777,628...42,906,424
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Creg1
cellular repressor of E1A-stimulated genes 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr13:78,019,814...78,032,310
Ensembl chr13:78,019,843...78,032,308
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Cyrib
CYFIP related Rac1 interactor B
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 7:95,633,876...95,760,588
Ensembl chr 7:95,633,876...95,697,686
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Elk3
ETS transcription factor ELK3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 7:27,768,582...27,831,088
Ensembl chr 7:27,768,599...27,804,084
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Epn3
epsin 3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr10:79,438,978...79,449,516
Ensembl chr10:79,438,978...79,447,356
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Fhl1
four and a half LIM domains 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr X:134,555,399...134,614,930
Ensembl chr X:134,555,479...134,614,928
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Fibin
fin bud initiation factor homolog
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 3:96,942,405...96,944,676
Ensembl chr 3:96,942,406...96,944,676
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Fxyd3
FXYD domain-containing ion transport regulator 3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 1:86,305,531...86,312,455
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Hamp
hepcidin antimicrobial peptide
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 1:86,170,926...86,172,865
Ensembl chr 1:86,170,901...86,172,891
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Kank2
KN motif and ankyrin repeat domains 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 8:20,311,676...20,341,107
Ensembl chr 8:20,311,676...20,340,900
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Klf9
KLF transcription factor 9
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 1:220,700,108...220,725,110
Ensembl chr 1:220,700,108...220,725,037
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Lepr
leptin receptor
treatment
IAGP
RGD
PMID:33568522
RGD:401965412
NCBI chr 5:116,294,409...116,477,904
Ensembl chr 5:116,289,823...116,475,908
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Ms4a6a
membrane spanning 4-domains A6A
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 1:208,401,465...208,414,831
Ensembl chr 1:208,401,466...208,414,758
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Myh6
myosin heavy chain 6
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr15:28,418,120...28,442,316
Ensembl chr15:28,417,616...28,441,720
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Myh7
myosin heavy chain 7
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr15:28,446,550...28,469,888
Ensembl chr15:28,446,550...28,468,217
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Nppa
natriuretic peptide A
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 5:158,429,042...158,430,351
Ensembl chr 5:158,429,042...158,430,351
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Nupr1
nuclear protein 1, transcriptional regulator
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281
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Pik3ip1
phosphoinositide-3-kinase interacting protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr14:78,204,668...78,216,616
Ensembl chr14:78,204,053...78,216,608
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Plxnd1
plexin D1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 4:149,002,786...149,043,097
Ensembl chr 4:149,002,784...149,043,244
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Ptp4a2
protein tyrosine phosphatase 4A2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 5:142,165,405...142,192,412
Ensembl chr 5:142,165,700...142,191,899
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Ptpn3
protein tyrosine phosphatase, non-receptor type 3
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 5:71,908,520...72,027,323
Ensembl chr 5:71,911,135...72,065,443
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Sfrp1
secreted frizzled-related protein 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
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Sipa1l1
signal-induced proliferation-associated 1 like 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 6:101,839,351...102,118,408
Ensembl chr 6:101,839,404...102,116,950
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Trdn
triadin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr 1:23,955,651...24,410,494
Ensembl chr 1:23,955,651...24,410,595
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Wdr45
WD repeat domain 45
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr X:14,776,280...14,782,202
Ensembl chr X:14,776,293...14,782,202
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Zfp532
zinc finger protein 532
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:29556499
NCBI chr18:59,080,082...59,203,672
Ensembl chr18:59,092,789...59,203,666
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all