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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:glufosinate
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Accession:CHEBI:52136 term browser browse the term
Definition:A racemate comprising equimolar amounts of (2S)-gluphosinate (better known as gluphosinate-P) and (2R)-gluphosinate.
Synonyms:exact_synonym: rac-2-amino-4-[hydroxy(methyl)phosphoryl]butanoic acid
 related_synonym: (2RS)-2-amino-4-[hydroxy(methyl)phosphinoyl]butyric acid;   2-Amino-4-(hydroxymethylphosphinyl)butanoic acid;   3-Amino-3-carboxypropylmethylphosphinic acid;   4-[hydroxy(methyl)phosphinoyl]-DL-homoalanine;   DL-2-Amino-4-(methylphosphino)butanoic acid;   DL-phosphinothricin;   phosphinothricin;   rac-glufosinate
 alt_id: CHEBI:45066;   CHEBI:8139
 xref: CAS:51276-47-2;   KEGG:C05042;   KNApSAcK:C00000797
 xref_mesh: MESH:C003121
 xref: PDBeChem:PPQ;   PPDB:1540;   Pesticides:glufosinate;   Reaxys:2209267;   Wikipedia:Glufosinate
 cyclic_relationship: is_conjugate_acid_of CHEBI:58882


show annotations for term's descendants           Sort by:
glufosinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpk1 alpha-kinase 1 decreases expression ISO phosphinothricin results in decreased expression of ALPK1 mRNA CTD PMID:34597628 NCBI chr 2:216,126,939...216,247,180
Ensembl chr 2:216,128,825...216,247,157 		JBrowse link
G Arc activity-regulated cytoskeleton-associated protein multiple interactions
increases expression		 ISO Dizocilpine Maleate inhibits the reaction [phosphinothricin results in increased expression of ARC mRNA] CTD PMID:30557575 NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378 		JBrowse link
G Armc2 armadillo repeat containing 2 decreases expression ISO phosphinothricin results in decreased expression of ARMC2 mRNA CTD PMID:34597628 NCBI chr20:45,395,859...45,501,808
Ensembl chr20:45,394,127...45,504,819 		JBrowse link
G Ccdc180 coiled-coil domain containing 180 decreases expression ISO phosphinothricin results in decreased expression of CCDC180 mRNA CTD PMID:34597628 NCBI chr 5:60,154,883...60,223,508
Ensembl chr 5:60,154,910...60,223,522 		JBrowse link
G Cfap43 cilia and flagella associated protein 43 decreases expression ISO phosphinothricin results in decreased expression of CFAP43 mRNA CTD PMID:34597628 NCBI chr 1:246,625,259...246,712,438
Ensembl chr 1:246,625,262...246,712,443 		JBrowse link
G Cfap61 cilia and flagella associated protein 61 decreases expression ISO phosphinothricin results in decreased expression of CFAP61 mRNA CTD PMID:34597628 NCBI chr 3:133,354,400...133,633,310
Ensembl chr 3:133,354,197...133,633,320 		JBrowse link
G Cftr CF transmembrane conductance regulator decreases expression ISO phosphinothricin results in decreased expression of CFTR mRNA CTD PMID:34597628 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756 		JBrowse link
G Dpf3 double PHD fingers 3 decreases expression ISO phosphinothricin results in decreased expression of DPF3 mRNA CTD PMID:34597628 NCBI chr 6:102,841,403...103,125,558
Ensembl chr 6:102,846,029...103,125,493 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit increases expression ISO phosphinothricin results in increased expression of FOS protein CTD PMID:27031874 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 increases expression ISO phosphinothricin results in increased expression of FXR1 mRNA CTD PMID:34597628 NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590 		JBrowse link
G Gfap glial fibrillary acidic protein increases expression ISO phosphinothricin results in increased expression of GFAP mRNA; phosphinothricin results in increased expression of GFAP protein CTD PMID:27031874 NCBI chr10:87,852,891...87,861,631
Ensembl chr10:87,852,890...87,861,589 		JBrowse link
G Glul glutamate-ammonia ligase increases expression
multiple interactions		 ISO phosphinothricin results in increased expression of GLUL mRNA
phosphinothricin results in increased expression of and results in increased activity of GLUL protein		 CTD PMID:27031874 NCBI chr13:65,969,053...66,035,121
Ensembl chr13:66,025,630...66,035,108 		JBrowse link
G Inpp5a inositol polyphosphate-5-phosphatase A decreases expression ISO phosphinothricin results in decreased expression of INPP5A mRNA CTD PMID:34597628 NCBI chr 1:194,190,086...194,380,429
Ensembl chr 1:194,190,393...194,380,428 		JBrowse link
G Iqank1 IQ motif and ankyrin repeat containing 1 decreases expression ISO phosphinothricin results in decreased expression of IQANK1 mRNA CTD PMID:34597628 NCBI chr 7:107,724,962...107,759,163
Ensembl chr 7:107,724,997...107,759,162 		JBrowse link
G Kcnd3 potassium voltage-gated channel subfamily D member 3 decreases expression ISO phosphinothricin results in decreased expression of KCND3 mRNA CTD PMID:34597628 NCBI chr 2:192,937,950...193,155,345
Ensembl chr 2:192,937,950...193,155,345 		JBrowse link
G Klk1c10 kallikrein 1-related peptidase C10 increases secretion ISO phosphinothricin results in increased secretion of KLK3 protein CTD PMID:20363314 NCBI chr 1:94,402,993...94,407,052
Ensembl chr 1:94,402,993...94,407,052 		JBrowse link
G Klrg1 killer cell lectin like receptor G1 decreases expression ISO phosphinothricin results in decreased expression of KLRG1 mRNA CTD PMID:34597628 NCBI chr 4:155,455,465...155,467,301
Ensembl chr 4:155,455,495...155,467,424 		JBrowse link
G Ms4a14 membrane spanning 4-domains A14 increases expression ISO phosphinothricin results in increased expression of MS4A14 mRNA CTD PMID:34597628 NCBI chr 1:207,949,423...207,964,937
Ensembl chr 1:207,949,426...207,964,937 		JBrowse link
G Nefh neurofilament heavy chain affects expression EXP phosphinothricin affects the expression of NEFH mRNA CTD PMID:22954530 NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351 		JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 decreases expression ISO phosphinothricin results in decreased expression of ODAD2 mRNA CTD PMID:34597628 NCBI chr17:55,216,877...55,409,872
Ensembl chr17:55,218,991...55,409,399 		JBrowse link
G Peg3 paternally expressed 3 decreases expression ISO phosphinothricin results in decreased expression of PEG3 mRNA CTD PMID:25477793 NCBI chr 1:67,097,874...67,124,692
Ensembl chr 1:67,097,904...67,124,671 		JBrowse link
G Phkg2 phosphorylase kinase catalytic subunit gamma 2 increases expression ISO phosphinothricin results in increased expression of PHKG2 mRNA CTD PMID:34597628 NCBI chr 1:182,184,362...182,197,124
Ensembl chr 1:182,184,650...182,197,124 		JBrowse link
G Plcd4 phospholipase C, delta 4 decreases expression ISO phosphinothricin results in decreased expression of PLCD4 mRNA CTD PMID:34597628 NCBI chr 9:76,115,523...76,158,602
Ensembl chr 9:76,117,168...76,142,453 		JBrowse link
G Ppp1r36 protein phosphatase 1, regulatory subunit 36 increases expression ISO phosphinothricin results in increased expression of PPP1R36 mRNA CTD PMID:34597628 NCBI chr 6:95,138,526...95,159,102
Ensembl chr 6:95,139,007...95,159,102 		JBrowse link
G Pten phosphatase and tensin homolog affects expression ISO phosphinothricin affects the expression of PTEN mRNA CTD PMID:25477793 NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838 		JBrowse link
G Slc17a9 solute carrier family 17 member 9 decreases expression ISO phosphinothricin results in decreased expression of SLC17A9 mRNA CTD PMID:34597628 NCBI chr 3:167,839,246...167,857,462
Ensembl chr 3:167,839,385...167,855,985 		JBrowse link
G Slc8b1 solute carrier family 8 member B1 decreases expression ISO phosphinothricin results in decreased expression of SLC8B1 mRNA CTD PMID:34597628 NCBI chr12:36,029,759...36,053,087
Ensembl chr12:36,029,760...36,053,031 		JBrowse link
G Spag16 sperm associated antigen 16 decreases expression ISO phosphinothricin results in decreased expression of SPAG16 mRNA CTD PMID:34597628 NCBI chr 9:71,333,005...72,252,772
Ensembl chr 9:71,332,992...72,252,708 		JBrowse link
G Sulf1 sulfatase 1 decreases expression ISO phosphinothricin results in decreased expression of SULF1 mRNA CTD PMID:34597628 NCBI chr 5:6,362,894...6,526,174
Ensembl chr 5:6,362,911...6,525,584 		JBrowse link
G Syt10 synaptotagmin 10 decreases expression ISO phosphinothricin results in decreased expression of SYT10 mRNA CTD PMID:34597628 NCBI chr 7:120,857,698...120,920,863
Ensembl chr 7:120,862,972...120,920,863 		JBrowse link
G Tax1bp1 Tax1 binding protein 1 increases expression ISO phosphinothricin results in increased expression of TAX1BP1 mRNA CTD PMID:34597628 NCBI chr 4:81,821,991...81,877,906
Ensembl chr 4:81,821,989...81,879,100 		JBrowse link
G Tmtc1 transmembrane O-mannosyltransferase targeting cadherins 1 decreases expression ISO phosphinothricin results in decreased expression of TMTC1 mRNA CTD PMID:34597628 NCBI chr 4:181,142,937...181,357,979
Ensembl chr 4:181,146,251...181,359,289 		JBrowse link
G Wnt2 Wnt family member 2 decreases expression ISO phosphinothricin results in decreased expression of WNT2 mRNA CTD PMID:34597628 NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402 		JBrowse link
G Zfpm2 zinc finger protein, multitype 2 decreases expression ISO phosphinothricin results in decreased expression of ZFPM2 mRNA CTD PMID:34597628 NCBI chr 7:71,678,658...72,116,209
Ensembl chr 7:71,678,880...72,116,205 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19808
    role 19784
      application 19627
        agrochemical 16259
          glufosinate-P 34
            glufosinate 34
              N-acetylphosphinothricin + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19808
    subatomic particle 19806
      composite particle 19806
        hadron 19806
          baryon 19806
            nucleon 19806
              atomic nucleus 19806
                atom 19806
                  main group element atom 19756
                    main group molecular entity 19756
                      s-block molecular entity 19595
                        hydrogen molecular entity 19582
                          hydrides 19095
                            inorganic hydride 18093
                              pnictogen hydride 18082
                                nitrogen hydride 17989
                                  azane 17798
                                    ammonia 17797
                                      organic amino compound 17797
                                        amino acid 15928
                                          alpha-amino acid 13848
                                            non-proteinogenic alpha-amino acid 3792
                                              2-amino-4-[hydroxy(methyl)phosphoryl]butanoic acid 34
                                                glufosinate-P 34
                                                  glufosinate 34
                                                    N-acetylphosphinothricin + 0
paths to the root