Plcd4 (phospholipase C, delta 4) - Rat Genome Database

Name: Plcd4
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Plcd4 (phospholipase C, delta 4) Rattus norvegicus

Analyze

Symbol:

Plcd4

Name:

phospholipase C, delta 4

RGD ID:

621025

Description:

Enables phosphatidylinositol phospholipase C activity. Predicted to be involved in small GTPase mediated signal transduction. Predicted to act upstream of or within acrosome reaction. Predicted to be located in cytosol; endoplasmic reticulum; and plasma membrane. Orthologous to human PLCD4 (phospholipase C delta 4); PARTICIPATES IN calcium/calcium-mediated signaling pathway; inositol phosphate metabolic pathway; phosphatidylinositol 3-kinase signaling pathway; INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4; 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4; phosphoinositide phospholipase C delta-4; phosphoinositide phospholipase C-delta-4; phospholipase C-delta-4; PLC-delta-4

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PLCD4 (phospholipase C delta 4)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Plcd4 (phospholipase C, delta 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Plcd4 (phospholipase C delta 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PLCD4 (phospholipase C delta 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PLCD4 (phospholipase C delta 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Plcd4 (phospholipase C delta 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PLCD4 (phospholipase C delta 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PLCD4 (phospholipase C delta 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Plcd4 (phospholipase C delta 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Plcd4 (phospholipase C, delta 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	PLCD4 (phospholipase C delta 4)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	plcd4b (phospholipase C, delta 4b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	plcd4a (phospholipase C, delta 4a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	PLC1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	plc-4	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	plcd4	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	9	76,115,523 - 76,158,602 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	76,117,168 - 76,142,453 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	84,562,298 - 84,587,522 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	89,691,247 - 89,716,473 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	88,077,430 - 88,102,653 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	81,816,395 - 81,844,364 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	81,816,872 - 81,844,364 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	81,579,905 - 81,608,512 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	73,878,506 - 73,905,127 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	74,025,487 - 74,052,109 (+)	NCBI
Celera	9	73,690,442 - 73,715,587 (+)	NCBI		Celera
Cytogenetic Map	9	q33	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

alacrima, achalasia, and impaired intellectual development syndrome (ISO)

cerebrotendinous xanthomatosis (ISO)

genetic disease (ISO)

myofibrillar myopathy 1 (ISO)

Neurodevelopmental Disorders (ISO)

paroxysmal nonkinesigenic dyskinesia 1 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(S)-nicotine (ISO)

1,2-dimethylhydrazine (EXP)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acetylsalicylic acid (EXP)

acrylamide (EXP)

aflatoxin B1 (EXP)

Aflatoxin B2 alpha (ISO)

amitriptyline (EXP)

anthocyanin (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

chlordecone (ISO)

chrysene (ISO)

copper atom (EXP,ISO)

copper(0) (EXP,ISO)

dexamethasone (EXP)

dibenz[a,h]anthracene (ISO)

dichloroacetic acid (ISO)

dicrotophos (ISO)

diuron (EXP)

endosulfan (EXP)

ethanol (ISO)

fenvalerate (EXP)

flavonoids (EXP)

folic acid (ISO)

furan (EXP)

genistein (EXP,ISO)

gentamycin (EXP)

glufosinate (ISO)

ketamine (EXP)

morphine (ISO)

N-Nitrosopyrrolidine (ISO)

nicotine (ISO)

paracetamol (EXP,ISO)

perfluorooctane-1-sulfonic acid (EXP)

pirinixic acid (ISO)

resveratrol (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

tetraphene (ISO)

thioacetamide (EXP)

topiramate (EXP)

trichloroethene (EXP)

triptonide (ISO)

vinclozolin (EXP)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

acrosome reaction (IEA,ISO)

intracellular signal transduction (IEA,TAS)

lipid catabolic process (IEA)

small GTPase mediated signal transduction (ISO)

Cellular Component

cytosol (IEA,ISO)

endoplasmic reticulum (IEA,ISO)

membrane (IEA)

nucleus (IEA)

plasma membrane (IEA,ISO)

Molecular Function

calcium ion binding (IEA)

G-protein alpha-subunit binding (ISO,ISS)

guanyl-nucleotide exchange factor activity (ISO)

phosphatidylinositol phospholipase C activity (IDA,IEA)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

calcium/calcium-mediated signaling pathway (IEA)

inositol phosphate metabolic pathway (IEA)

phosphatidylinositol 3-kinase signaling pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Molecular cloning, splice variants, expression, and purification of phospholipase C-delta 4.	Lee SB and Rhee SG, J Biol Chem 1996 Jan 5;271(1):25-31.
3.	A new phospholipase C delta 4 is induced at S-phase of the cell cycle and appears in the nucleus.	Liu N, etal., J Biol Chem 1996 Jan 5;271(1):355-60.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
6.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
7.	GOA pipeline	RGD automated data pipeline
8.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:2033248	PMID:9915823	PMID:11340203	PMID:30194280

Genomics

Comparative Map Data

Plcd4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	9	76,115,523 - 76,158,602 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	76,117,168 - 76,142,453 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	84,562,298 - 84,587,522 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	89,691,247 - 89,716,473 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	88,077,430 - 88,102,653 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	81,816,395 - 81,844,364 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	81,816,872 - 81,844,364 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	81,579,905 - 81,608,512 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	73,878,506 - 73,905,127 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	74,025,487 - 74,052,109 (+)	NCBI
Celera	9	73,690,442 - 73,715,587 (+)	NCBI		Celera
Cytogenetic Map	9	q33	NCBI

PLCD4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	218,607,899 - 218,637,175 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	218,607,855 - 218,637,184 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	219,472,622 - 219,501,898 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	219,180,876 - 219,210,148 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	219,298,136 - 219,327,409	NCBI
Celera	2	213,240,381 - 213,269,662 (+)	NCBI		Celera
Cytogenetic Map	2	q35	NCBI
HuRef	2	211,325,808 - 211,355,366 (+)	NCBI		HuRef
CHM1_1	2	219,479,454 - 219,508,883 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	219,094,436 - 219,123,729 (+)	NCBI		T2T-CHM13v2.0

Plcd4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	74,581,175 - 74,605,137 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	74,582,047 - 74,606,953 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	74,541,975 - 74,565,977 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	74,542,888 - 74,567,794 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	74,589,463 - 74,612,551 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	74,477,739 - 74,499,184 (+)	NCBI		MGSCv36	mm8
Celera	1	75,100,417 - 75,123,669 (+)	NCBI		Celera
Cytogenetic Map	1	C4	NCBI
cM Map	1	38.54	NCBI

Plcd4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955453	14,787,677 - 14,806,485 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955453	14,775,119 - 14,812,872 (-)	NCBI	ChiLan1.0	ChiLan1.0

PLCD4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	2B	121,243,168 - 121,282,926 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	105,864,706 - 105,895,114 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	224,461,261 - 224,490,345 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	224,461,261 - 224,490,345 (+)	Ensembl	panpan1.1		panPan2

PLCD4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	25,221,329 - 25,244,492 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	25,226,244 - 25,244,914 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	26,041,363 - 26,064,404 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	25,237,345 - 25,260,497 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	25,237,771 - 25,260,768 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	25,142,268 - 25,165,298 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	25,076,485 - 25,099,551 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	25,096,641 - 25,120,171 (+)	NCBI		UU_Cfam_GSD_1.0

Plcd4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	174,714,969 - 174,756,001 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936569	1,058,611 - 1,099,577 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936569	1,058,092 - 1,097,662 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PLCD4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	120,626,938 - 120,688,112 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	120,660,549 - 120,695,731 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	133,641,398 - 133,676,142 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PLCD4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	104,512,156 - 104,540,555 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	104,512,678 - 104,542,531 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	94,863,854 - 94,893,228 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Plcd4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624823	6,418,922 - 6,442,418 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624823	6,418,359 - 6,446,848 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Plcd4
176 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	327
Count of miRNA genes:	86
Interacting mature miRNAs:	95
Transcripts:	ENSRNOT00000022234, ENSRNOT00000041407, ENSRNOT00000057430
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10054125	Srcrt7	Stress Responsive Cort QTL 7	3.33	0.0011	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	9	1	87073594	Rat
70186	Niddm26	Non-insulin dependent diabetes mellitus QTL 26	3.87		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	9	22071169	86369743	Rat
7207814	Bmd91	Bone mineral density QTL 91	3.5		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	9	23754144	83851531	Rat
70218	Cm28	Cardiac mass QTL 28	8.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	25268044	79271759	Rat
724544	Uae9	Urinary albumin excretion QTL 9	4.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	9	25268044	114175309	Rat
731164	Uae25	Urinary albumin excretion QTL 25	3.5	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	25661188	100929786	Rat
7411656	Foco26	Food consumption QTL 26	9.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	32535505	77535505	Rat
7411571	Bw138	Body weight QTL 138	14.3	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	9	32535505	77535505	Rat
1598834	Memor11	Memory QTL 11	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	9	36962359	77814038	Rat
8662828	Vetf6	Vascular elastic tissue fragility QTL 6	3.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	9	36962359	92058970	Rat
2290450	Scl57	Serum cholesterol level QTL 57	4.15		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	9	36962359	95410867	Rat
6903941	Pur31	Proteinuria QTL 31		0.036	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	9	40194188	85194188	Rat
11353949	Bp393	Blood pressure QTL 393			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	40194188	85194188	Rat
61352	Bp34	Blood pressure QTL 34	5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	42495343	79271511	Rat
10058949	Gmadr5	Adrenal mass QTL 5	2	0.014	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	9	42791513	87976209	Rat
11353951	Bp394	Blood pressure QTL 394			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	44649921	89649921	Rat
12879506	Pur33	Proteinuria QTL 33			urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	9	44649921	89649921	Rat
11353957	Bmd92	Bone mineral density QTL 92		0.01	tibia mineral mass (VT:1000283)	volumetric bone mineral density (CMO:0001553)	9	46114199	91114199	Rat
631656	Bp108	Blood pressure QTL 108	5.97	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	48598251	93598251	Rat
2303170	Bp332	Blood pressure QTL 332	3.73	0.027	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	55847841	77026453	Rat
2303180	Bp333	Blood pressure QTL 333		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	56627713	78595166	Rat
2303180	Bp333	Blood pressure QTL 333		0.001	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	9	56627713	78595166	Rat
2303180	Bp333	Blood pressure QTL 333		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	56627713	78595166	Rat
1578760	Cm53	Cardiac mass QTL 53	3.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	56771635	101771635	Rat
724515	Uae16	Urinary albumin excretion QTL 16	8		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	58163035	100929646	Rat
1300134	Bp185	Blood pressure QTL 185	3.73		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	61381434	104821652	Rat
1581580	Uae34	Urinary albumin excretion QTL 34			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	62072275	96470995	Rat
1578757	Pur6	Proteinuria QTL 6	3.3	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	9	62072275	96470995	Rat
61385	Edpm9	Estrogen-dependent pituitary mass QTL 9	3.43	0.05	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	9	63869687	108869687	Rat
731171	Glom6	Glomerulus QTL 6	2.8	0.0003	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	9	64573531	109573531	Rat
1354626	Bvd1	Brain ventricular dilatation QTL 1	3.73	0.001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	9	75712843	111552878	Rat

Markers in Region

AI045490

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	76,142,215 - 76,142,423 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	81,844,127 - 81,844,334	NCBI	Rnor6.0
Rnor_5.0	9	81,608,275 - 81,608,482	UniSTS	Rnor5.0
RGSC_v3.4	9	73,904,890 - 73,905,097	UniSTS	RGSC3.4
Celera	9	73,715,350 - 73,715,557	UniSTS
RH 3.4 Map	9	709.9	UniSTS
Cytogenetic Map	9	q33	UniSTS

RH138080

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	76,141,169 - 76,141,328 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	81,843,081 - 81,843,239	NCBI	Rnor6.0
Rnor_5.0	9	81,607,229 - 81,607,387	UniSTS	Rnor5.0
RGSC_v3.4	9	73,903,844 - 73,904,002	UniSTS	RGSC3.4
Celera	9	73,714,304 - 73,714,462	UniSTS
RH 3.4 Map	9	709.1	UniSTS
Cytogenetic Map	9	q33	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium							8	11	27		7		8
Low	3	13	16		19				47	29	19	11
Below cutoff		30	29	29		29				6	15

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_080688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245136	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245137	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245138	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767182	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767184	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767187	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767189	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767191	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039082973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039082974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039082975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039082976	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	D50455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HB877140	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HB895774	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HC934549	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HC953183	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U16655	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000022234 ⟹ ENSRNOP00000022234

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	9	81,821,346 - 81,843,662 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000041407 ⟹ ENSRNOP00000039708

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	76,117,168 - 76,142,453 (+)	Ensembl
Rnor_6.0 Ensembl	9	81,816,872 - 81,844,364 (+)	Ensembl

RefSeq Acc Id:

NM_080688 ⟹ NP_542419

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,117,168 - 76,142,453 (+)	NCBI
Rnor_6.0	9	81,816,872 - 81,844,364 (+)	NCBI
Rnor_5.0	9	81,579,905 - 81,608,512 (+)	NCBI
RGSC_v3.4	9	73,878,506 - 73,905,127 (+)	RGD
Celera	9	73,690,442 - 73,715,587 (+)	RGD

Sequence:

show sequence

GAAGCAGTCAAGTGCAAAGGAGAAAAGGAGTCTTCTCATTCTCAGTGGAGAGCATTGTGGAGCT
CGGGAGACGACGCTCACAGACACAGGATTACTATCCTACCCACGGTGACTCTGGCACCAGCTGG
TGGAGCAGTGGGGGATGGCATCTCAGATTCAAAAGCTACTGACCACTAATCAGGACCTGCTGCT
GATGCAAAAAGGAACGATGATGCGCAAGGTGAGGACCAAAAGCTGGAAGAAGCTAAGATACTTC
AGACTTCAGGATGACGGCATGACGGTCTGGCATGGGCGGCACCTTGAAAGCATATCCAAGCCCA
CTTTTTCAATCTCTGATGTGGAGAGGATCCGTAAGGGCCAGGATTCTGAGCTGTTGCGCTATCT
GGTGGAAGAGTTCCCCCTGGAGCAAGGCTTCACCATTGTCTTTAATGGGCGCCGCCCCAACCTG
GACCTAGTGGCCAACAGTGTTGAAGAGGCCCAGACTTGGATGCGAGGACTCCAGCTGTTGGTGG
ATCTCGTCGCCAGAATGAACTACCAGGAGCAGCTGGATCAAATGTTGAGAGAATGGTTCCAACA
AGCAGACAGAAACCAGGACAGCCGGATGAGTTTCAGAGAAGCTCAACGGCTGCTGCTTCTGATG
AATGTGGAAATGGATGAAGAATATGCCTTCAGTCTTTTTCAGGAAGCAGATGTTTCCCAATCTA
ATACTCTGGATTCAGAAGAATTTGTACAGTTCTATAAGGCCCTGACTAAGCGCACTGAGATTGA
AGAACTATTTGAGAACTTTTCATCTGACAAACAGAAGCTGACCTTGCTGGAATTTGTAGATTTC
CTTAGAGAGGAACAGAAAGAAAGCGACCATTCCTCTGACCTTGCTCTGAAACTCATTGACCGCT
ATGAGCCTTCTGAGAATGGCAGATTGCTACGTGTGCTGAGCAAGGATGGCTTCCTCAGCTACCT
CTGCTCAGCGGATGGAAACATCTTCAACCCCGACTGCCTCCCTATCTATCAGGATATGACTCAG
CCTCTGAGTCACTACTACATCAACTCCTCTCACAACACCTACCTACTGGGTGACCAGTTTTGTG
GCCAGAGCAGCGTTGAAGGATACATACGGGCCTTGAAACGGGGGTGCCGCTGTGTGGAGGTGGA
TACATGGGACGGACCTGACGGAGAGCCCGTTGTTTATCATGGGCGTACACTGACCTCTCGTATC
CTGTTCAAAGATGTTTTGGCAACATTAGCACAATATGCCTTCCAGTCGTCAGACTACCCACTCA
TCTTATCTCTGGATAACCACTGCACTTGGGAACAGCAGAAGACCATGGCACACCATCTGATTGC
GATCCTGGGAGAGCAGCTGCTGAGTACCACCCTAGAGGAACAACTGATTGATATAATGCCCTCG
CCAGAGCAGCTTCGGGGGAAGATCTTGGTAAAAGGAAAGAAGTTGAGAACAATTGAGGTTGTTG
AGTCTGACAAGGAGGAAGAAGAGCTGGAGAAAGATGAGGGGTCAGATCTGGACCCAGCCTCCGC
TGAGCTTGACATGCAGTCTCAGCCCGAGTCCCAGGAGCAGGCCTCTGGGAACAAGAGCAAGAAC
AAGAAGAAGTTTCTTCTCCAGAGTTCCACAACCATCCTATGCCCAGACCTATCTGCCCTGGTTG
TCTACTTGAGGACTGCTCCCTTCTGCAGCTTCACTCACTCCAAAGAAAACTACCACATCTACGA
CATTTCATCCTTTTCTGAGTCCAAGGCCAAGAACCTCATCAGGGAGGCAGGCAATGAGTTTGTA
CAGCACAATGCCAGACAGCTATGCCGTGTATACCCCAGTGGTCTGAGGACAGATTCATCGAACT
ATAACCCCCAGGAACACTGGAATGTTGGCTGCCAAATGGTGGCCATGAACATGCAGACTGCAGG
AAGTGCAATGGACATCTGTGATGGGCTCTTCCGCCAGAATGGGGGCTCTGGCTATGTGCTGAAG
CCAGAATTCCTGAGAGATACCCAGAGTTCCTTCAATCCCATGAAGCCCGTTAGTCTTTATAAAG
CCCAGATCCTTGTAGTCCAGGTGATCAGTGGTCAAAGACTCCCCAAAGTGGACAAAACCAAAGA
GACAACCGTTGTGGATCCACTGGTGAGAGTAGAGCTCTATGGTGTTCCTGAAGACACAAAGCAG
CAAGAGACCAGCTATGTGGAGAACAATGGTATTAATCCATACTGGGGGGAGACATTCTATTTCC
AGATCCAGGTGCCTGAACTTGCTATGCTGCGTTTTGTGGTAAAGGATTATAGCAGGACATCCCG
AAATAACTTTATAGGCCAATACACCCTGCCTTGGACCTGCATGAAACATGGCTACCGACATGTA
TCCTTGCTCTCCAAAGACGGCACTAGCCTCCATCCAGCCTCCATCTTTGTGTACACCTGCATGC
AAGAAGACCTGGATATGGATGAGCCCTGAGAAACACAGGGAGGGTCTTGAAGCAGGACAATCTA
CAGATGCACTCTTTTCCAACCTACAACTTCCTCAGCATCCAGAGCCAGCCAAAGGATCAGTGGC
GGACCAAGGTTCCCAGGTGAAGGTTGAGGAAGAATCCTGACCCAGAACTATGACTCTAGAGAAC
AGTGCACAGCCGAGTCCCCACTGGACTGCTGCTCCTTAGCTGGTCTAAATAGAGCTTCTCTGTC
CAACTTGA

hide sequence

RefSeq Acc Id:

XM_006245136 ⟹ XP_006245198

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,118,764 - 76,142,449 (+)	NCBI
Rnor_6.0	9	81,818,706 - 81,844,360 (+)	NCBI
Rnor_5.0	9	81,579,905 - 81,608,512 (+)	NCBI

Sequence:

show sequence

GAGAAAGGAGTGAGCTAGGAAGAAAGGAAAAGAAAGATTCAGGCATGGGATGGGAAAGGCAAGC
CAACGGGAAGAAAAGGAAGTTGTTTGGCGGGATGTAGGGGACTCGGAAGATGATGGAGTGGAGA
GAAAGATGATGGATGTCCCTCACTGATCCCAGGCCTTCTTTCAACATGCCTTCTGGAGAACGCC
CTTTCTAAGGGAAGAGTTGGCAAACTCTGCACCAGTTGTAGAGAGAGCTGTAATCTATTGCAGT
TTGTGTCACTGAAGGACCCTGACAGGACAGCCAGTCTTTCTGGTCTTCAGTCTCCTCCATGAAG
CTCAGGTCTCGTATGCTGTGGCTTCCCCGAGGTGACTCTGGCACCAGCTGGTGGAGCAGTGGGG
GATGGCATCTCAGATTCAAAAGCTACTGACCACTAATCAGGACCTGCTGCTGATGCAAAAAGGA
ACGATGATGCGCAAGGTGAGGACCAAAAGCTGGAAGAAGCTAAGATACTTCAGACTTCAGGATG
ACGGCATGACGGTCTGGCATGGGCGGCACCTTGAAAGCATATCCAAGCCCACTTTTTCAATCTC
TGATGTGGAGAGGATCCGTAAGGGCCAGGATTCTGAGCTGTTGCGCTATCTGGTGGAAGAGTTC
CCCCTGGAGCAAGGCTTCACCATTGTCTTTAATGGGCGCCGCCCCAACCTGGACCTAGTGGCCA
ACAGTGTTGAAGAGGCCCAGACTTGGATGCGAGGACTCCAGCTGTTGGTGGATCTCGTCGCCAG
AATGAACTACCAGGAGCAGCTGGATCAAATGTTGAGAGAATGGTTCCAACAAGCAGACAGAAAC
CAGGACAGCCGGATGAGTTTCAGAGAAGCTCAACGGCTGCTGCTTCTGATGAATGTGGAAATGG
ATGAAGAATATGCCTTCAGTCTTTTTCAGGAAGCAGATGTTTCCCAATCTAATACTCTGGATTC
AGAAGAATTTGTACAGTTCTATAAGGCCCTGACTAAGCGCACTGAGATTGAAGAACTATTTGAG
AACTTTTCATCTGACAAACAGAAGCTGACCTTGCTGGAATTTGTAGATTTCCTTAGAGAGGAAC
AGAAAGAAAGCGACCATTCCTCTGACCTTGCTCTGAAACTCATTGACCGCTATGAGCCTTCTGA
GAATGGCAGATTGCTACGTGTGCTGAGCAAGGATGGCTTCCTCAGCTACCTCTGCTCAGCGGAT
GGAAACATCTTCAACCCCGACTGCCTCCCTATCTATCAGGATATGACTCAGCCTCTGAGTCACT
ACTACATCAACTCCTCTCACAACACCTACCTACTGGGTGACCAGTTTTGTGGCCAGAGCAGCGT
TGAAGGATACATACGGGCCTTGAAACGGGGGTGCCGCTGTGTGGAGGTGGATACGTGGGACGGA
CCTGACGGAGAGCCCGTTGTTTATCATGGGCGTACACTGACCTCTCGTATCCTGTTCAAAGATG
TTTTGGCAACATTAGCACAATATGCCTTCCAGTCGTCAGACTACCCACTCATCTTATCTCTGGA
TAACCACTGCACTTGGGAACAGCAGAAGACCATGGCACACCATCTGATTGCGATCCTGGGAGAG
CAGCTGCTGAGTACCACCCTAGAGGAACAACTGATTGATATAATGCCCTCGCCAGAGCAGCTTC
GGGGGAAGATCTTGGTAAAAGGAAAGAAGTTGAGAACAATTGAGGTTGTTGAGTCTGACAAGGA
GGAAGAAGAGCTGGAGAAAGATGAGGGGTCAGATCTGGACCCAGCCTCCGCTGAGCTTGACATG
CAGTCTCAGCCCGAGTCCCAGGAGCAGGCCTCTGGGAACAAGAGCAAGAACAAGAAGAAGGTTA
TGAAGTGTCCGATGTCTTGTCTGCTTATCTGTGCTCATGTTTTGGCCCAGGCTCCTAATTCCAT
TCCTGAGTCCATTCTCTTGCCAAAGAAGTTTCTTCTCCAGAGTTCCACAACCATCCTATGCCCA
GACCTATCTGCCCTGGTTGTCTACTTGAGGACTGCTCCCTTCTGCAGCTTCACTCACTCCAAAG
AAAACTACCACATCTACGACATTTCATCCTTTTCTGAGTCCAAGGCCAAGAACCTCATCAGGGA
GGCAGGCAATGAGTTTGTACAGCACAATGCCAGACAGCTATGCCGTGTATACCCCAGTGGTCTG
AGGACAGATTCATCGAACTATAACCCCCAGGAACACTGGAATGTTGGCTGCCAAATGGTGGCCA
TGAACATGCAGACTGCAGGAAGTGCAATGGACATCTGTGATGGGCTCTTCCGCCAGAATGGGGG
CTCTGGCTATGTGCTGAAGCCAGAATTCCTGAGAGATACCCAGAGTTCCTTCAATCCCATGAAG
CCCGTTAGTCTTTATAAAGCCCAGATCCTTGTAGTCCAGGTGATCAGTGGTCAAAGACTCCCCA
AAGTGGACAAAACCAAAGAGACAACCGTTGTGGATCCACTGGTGAGAGTAGAGCTCTATGGTGT
TCCTGAAGACACAAAGCAGCAAGAGACCAGCTATGTGGAGAACAATGGTATTAATCCATACTGG
GGGGAGACATTCTATTTCCAGATCCAGGTGCCTGAACTTGCTATGCTGCGTTTTGTGGTAAAGG
ATTATAGCAGGACATCCCGAAATAACTTTATAGGCCAATACACCCTGCCTTGGACCTGCATGAA
ACATGGTGAGACAAACCTTAGACTCTTGGCCAATATCCCAACTGTGGCTCCCTTCCTGATCCAA
TTCTTCTGCCTGTTTCTAGGCTACCGACATGTATCCTTGCTCTCCAAAGACGGCACTAGCCTCC
ATCCAGCCTCCATCTTTGTGTACACCTGCATGCAAGAAGACCTGGATATGGATGAGCCCTGAGA
AACACAGGGAGGGTCTTGAAGCAGAACAATCTACAGATGCACTCTTTTCCAACCTACAACTTCC
TCAGCATCCAGAGCCAGCCAAAGGATCAGTGGCGGACCAAGGTTCCCAGGTGAAGGTTGAGGAA
GAATCCTGACCCAGAACTATGACTCTAGAGAACAGTGCACAGCCGAGTCCCCACTGGACTGCTG
CTCCTTAGCTGGTCTAAATAGAGCTTCTCTGTCCAA

hide sequence

RefSeq Acc Id:

XM_006245137 ⟹ XP_006245199

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,118,764 - 76,142,449 (+)	NCBI
Rnor_6.0	9	81,818,706 - 81,844,360 (+)	NCBI
Rnor_5.0	9	81,579,905 - 81,608,512 (+)	NCBI

Sequence:

show sequence

GAGAAAGGAGTGAGCTAGGAAGAAAGGAAAAGAAAGATTCAGGCATGGGATGGGAAAGGCAAGC
CAACGGGAAGAAAAGGAAGTTGTTTGGCGGGATGTAGGGGACTCGGAAGATGATGGAGTGGAGA
GAAAGATGATGGATGTCCCTCACTGATCCCAGGCCTTCTTTCAACATGCCTTCTGGAGAACGCC
CTTTCTAAGGGAAGAGTTGGCAAACTCTGCACCAGTTGTAGAGAGAGCTGTAATCTATTGCAGT
TTGTGTCACTGAAGGACCCTGACAGGACAGCCAGTCTTTCTGGTCTTCAGTCTCCTCCATGAAG
CTCAGGTGACTCTGGCACCAGCTGGTGGAGCAGTGGGGGATGGCATCTCAGATTCAAAAGCTAC
TGACCACTAATCAGGACCTGCTGCTGATGCAAAAAGGAACGATGATGCGCAAGGTGAGGACCAA
AAGCTGGAAGAAGCTAAGATACTTCAGACTTCAGGATGACGGCATGACGGTCTGGCATGGGCGG
CACCTTGAAAGCATATCCAAGCCCACTTTTTCAATCTCTGATGTGGAGAGGATCCGTAAGGGCC
AGGATTCTGAGCTGTTGCGCTATCTGGTGGAAGAGTTCCCCCTGGAGCAAGGCTTCACCATTGT
CTTTAATGGGCGCCGCCCCAACCTGGACCTAGTGGCCAACAGTGTTGAAGAGGCCCAGACTTGG
ATGCGAGGACTCCAGCTGTTGGTGGATCTCGTCGCCAGAATGAACTACCAGGAGCAGCTGGATC
AAATGTTGAGAGAATGGTTCCAACAAGCAGACAGAAACCAGGACAGCCGGATGAGTTTCAGAGA
AGCTCAACGGCTGCTGCTTCTGATGAATGTGGAAATGGATGAAGAATATGCCTTCAGTCTTTTT
CAGGAAGCAGATGTTTCCCAATCTAATACTCTGGATTCAGAAGAATTTGTACAGTTCTATAAGG
CCCTGACTAAGCGCACTGAGATTGAAGAACTATTTGAGAACTTTTCATCTGACAAACAGAAGCT
GACCTTGCTGGAATTTGTAGATTTCCTTAGAGAGGAACAGAAAGAAAGCGACCATTCCTCTGAC
CTTGCTCTGAAACTCATTGACCGCTATGAGCCTTCTGAGAATGGCAGATTGCTACGTGTGCTGA
GCAAGGATGGCTTCCTCAGCTACCTCTGCTCAGCGGATGGAAACATCTTCAACCCCGACTGCCT
CCCTATCTATCAGGATATGACTCAGCCTCTGAGTCACTACTACATCAACTCCTCTCACAACACC
TACCTACTGGGTGACCAGTTTTGTGGCCAGAGCAGCGTTGAAGGATACATACGGGCCTTGAAAC
GGGGGTGCCGCTGTGTGGAGGTGGATACGTGGGACGGACCTGACGGAGAGCCCGTTGTTTATCA
TGGGCGTACACTGACCTCTCGTATCCTGTTCAAAGATGTTTTGGCAACATTAGCACAATATGCC
TTCCAGTCGTCAGACTACCCACTCATCTTATCTCTGGATAACCACTGCACTTGGGAACAGCAGA
AGACCATGGCACACCATCTGATTGCGATCCTGGGAGAGCAGCTGCTGAGTACCACCCTAGAGGA
ACAACTGATTGATATAATGCCCTCGCCAGAGCAGCTTCGGGGGAAGATCTTGGTAAAAGGAAAG
AAGTTGAGAACAATTGAGGTTGTTGAGTCTGACAAGGAGGAAGAAGAGCTGGAGAAAGATGAGG
GGTCAGATCTGGACCCAGCCTCCGCTGAGCTTGACATGCAGTCTCAGCCCGAGTCCCAGGAGCA
GGCCTCTGGGAACAAGAGCAAGAACAAGAAGAAGGTTATGAAGTGTCCGATGTCTTGTCTGCTT
ATCTGTGCTCATGTTTTGGCCCAGGCTCCTAATTCCATTCCTGAGTCCATTCTCTTGCCAAAGA
AGTTTCTTCTCCAGAGTTCCACAACCATCCTATGCCCAGACCTATCTGCCCTGGTTGTCTACTT
GAGGACTGCTCCCTTCTGCAGCTTCACTCACTCCAAAGAAAACTACCACATCTACGACATTTCA
TCCTTTTCTGAGTCCAAGGCCAAGAACCTCATCAGGGAGGCAGGCAATGAGTTTGTACAGCACA
ATGCCAGACAGCTATGCCGTGTATACCCCAGTGGTCTGAGGACAGATTCATCGAACTATAACCC
CCAGGAACACTGGAATGTTGGCTGCCAAATGGTGGCCATGAACATGCAGACTGCAGGAAGTGCA
ATGGACATCTGTGATGGGCTCTTCCGCCAGAATGGGGGCTCTGGCTATGTGCTGAAGCCAGAAT
TCCTGAGAGATACCCAGAGTTCCTTCAATCCCATGAAGCCCGTTAGTCTTTATAAAGCCCAGAT
CCTTGTAGTCCAGGTGATCAGTGGTCAAAGACTCCCCAAAGTGGACAAAACCAAAGAGACAACC
GTTGTGGATCCACTGGTGAGAGTAGAGCTCTATGGTGTTCCTGAAGACACAAAGCAGCAAGAGA
CCAGCTATGTGGAGAACAATGGTATTAATCCATACTGGGGGGAGACATTCTATTTCCAGATCCA
GGTGCCTGAACTTGCTATGCTGCGTTTTGTGGTAAAGGATTATAGCAGGACATCCCGAAATAAC
TTTATAGGCCAATACACCCTGCCTTGGACCTGCATGAAACATGGTGAGACAAACCTTAGACTCT
TGGCCAATATCCCAACTGTGGCTCCCTTCCTGATCCAATTCTTCTGCCTGTTTCTAGGCTACCG
ACATGTATCCTTGCTCTCCAAAGACGGCACTAGCCTCCATCCAGCCTCCATCTTTGTGTACACC
TGCATGCAAGAAGACCTGGATATGGATGAGCCCTGAGAAACACAGGGAGGGTCTTGAAGCAGAA
CAATCTACAGATGCACTCTTTTCCAACCTACAACTTCCTCAGCATCCAGAGCCAGCCAAAGGAT
CAGTGGCGGACCAAGGTTCCCAGGTGAAGGTTGAGGAAGAATCCTGACCCAGAACTATGACTCT
AGAGAACAGTGCACAGCCGAGTCCCCACTGGACTGCTGCTCCTTAGCTGGTCTAAATAGAGCTT
CTCTGTCCAA

hide sequence

RefSeq Acc Id:

XM_006245138 ⟹ XP_006245200

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,118,764 - 76,142,449 (+)	NCBI
Rnor_6.0	9	81,818,614 - 81,844,360 (+)	NCBI
Rnor_5.0	9	81,579,905 - 81,608,512 (+)	NCBI

Sequence:

show sequence

AAGGAAAGGTGATGGAGAAAGAGGAGGAGGAGAAGGTTAAGAAGAAGAGAACGCAAAAAGCTTG
ACTTGAGTGAGCAGAGAGGCTGGTGACTCTGGCACCAGCTGGTGGAGCAGTGGGGGATGGCATC
TCAGATTCAAAAGCTACTGACCACTAATCAGGACCTGCTGCTGATGCAAAAAGGAACGATGATG
CGCAAGGTGAGGACCAAAAGCTGGAAGAAGCTAAGATACTTCAGACTTCAGGATGACGGCATGA
CGGTCTGGCATGGGCGGCACCTTGAAAGCATATCCAAGCCCACTTTTTCAATCTCTGATGTGGA
GAGGATCCGTAAGGGCCAGGATTCTGAGCTGTTGCGCTATCTGGTGGAAGAGTTCCCCCTGGAG
CAAGGCTTCACCATTGTCTTTAATGGGCGCCGCCCCAACCTGGACCTAGTGGCCAACAGTGTTG
AAGAGGCCCAGACTTGGATGCGAGGACTCCAGCTGTTGGTGGATCTCGTCGCCAGAATGAACTA
CCAGGAGCAGCTGGATCAAATGTTGAGAGAATGGTTCCAACAAGCAGACAGAAACCAGGACAGC
CGGATGAGTTTCAGAGAAGCTCAACGGCTGCTGCTTCTGATGAATGTGGAAATGGATGAAGAAT
ATGCCTTCAGTCTTTTTCAGGAAGCAGATGTTTCCCAATCTAATACTCTGGATTCAGAAGAATT
TGTACAGTTCTATAAGGCCCTGACTAAGCGCACTGAGATTGAAGAACTATTTGAGAACTTTTCA
TCTGACAAACAGAAGCTGACCTTGCTGGAATTTGTAGATTTCCTTAGAGAGGAACAGAAAGAAA
GCGACCATTCCTCTGACCTTGCTCTGAAACTCATTGACCGCTATGAGCCTTCTGAGAATGGCAG
ATTGCTACGTGTGCTGAGCAAGGATGGCTTCCTCAGCTACCTCTGCTCAGCGGATGGAAACATC
TTCAACCCCGACTGCCTCCCTATCTATCAGGATATGACTCAGCCTCTGAGTCACTACTACATCA
ACTCCTCTCACAACACCTACCTACTGGGTGACCAGTTTTGTGGCCAGAGCAGCGTTGAAGGATA
CATACGGGCCTTGAAACGGGGGTGCCGCTGTGTGGAGGTGGATACGTGGGACGGACCTGACGGA
GAGCCCGTTGTTTATCATGGGCGTACACTGACCTCTCGTATCCTGTTCAAAGATGTTTTGGCAA
CATTAGCACAATATGCCTTCCAGTCGTCAGACTACCCACTCATCTTATCTCTGGATAACCACTG
CACTTGGGAACAGCAGAAGACCATGGCACACCATCTGATTGCGATCCTGGGAGAGCAGCTGCTG
AGTACCACCCTAGAGGAACAACTGATTGATATAATGCCCTCGCCAGAGCAGCTTCGGGGGAAGA
TCTTGGTAAAAGGAAAGAAGTTGAGAACAATTGAGGTTGTTGAGTCTGACAAGGAGGAAGAAGA
GCTGGAGAAAGATGAGGGGTCAGATCTGGACCCAGCCTCCGCTGAGCTTGACATGCAGTCTCAG
CCCGAGTCCCAGGAGCAGGCCTCTGGGAACAAGAGCAAGAACAAGAAGAAGGTTATGAAGTGTC
CGATGTCTTGTCTGCTTATCTGTGCTCATGTTTTGGCCCAGGCTCCTAATTCCATTCCTGAGTC
CATTCTCTTGCCAAAGAAGTTTCTTCTCCAGAGTTCCACAACCATCCTATGCCCAGACCTATCT
GCCCTGGTTGTCTACTTGAGGACTGCTCCCTTCTGCAGCTTCACTCACTCCAAAGAAAACTACC
ACATCTACGACATTTCATCCTTTTCTGAGTCCAAGGCCAAGAACCTCATCAGGGAGGCAGGCAA
TGAGTTTGTACAGCACAATGCCAGACAGCTATGCCGTGTATACCCCAGTGGTCTGAGGACAGAT
TCATCGAACTATAACCCCCAGGAACACTGGAATGTTGGCTGCCAAATGGTGGCCATGAACATGC
AGACTGCAGGAAGTGCAATGGACATCTGTGATGGGCTCTTCCGCCAGAATGGGGGCTCTGGCTA
TGTGCTGAAGCCAGAATTCCTGAGAGATACCCAGAGTTCCTTCAATCCCATGAAGCCCGTTAGT
CTTTATAAAGCCCAGATCCTTGTAGTCCAGGTGATCAGTGGTCAAAGACTCCCCAAAGTGGACA
AAACCAAAGAGACAACCGTTGTGGATCCACTGGTGAGAGTAGAGCTCTATGGTGTTCCTGAAGA
CACAAAGCAGCAAGAGACCAGCTATGTGGAGAACAATGGTATTAATCCATACTGGGGGGAGACA
TTCTATTTCCAGATCCAGGTGCCTGAACTTGCTATGCTGCGTTTTGTGGTAAAGGATTATAGCA
GGACATCCCGAAATAACTTTATAGGCCAATACACCCTGCCTTGGACCTGCATGAAACATGGTGA
GACAAACCTTAGACTCTTGGCCAATATCCCAACTGTGGCTCCCTTCCTGATCCAATTCTTCTGC
CTGTTTCTAGGCTACCGACATGTATCCTTGCTCTCCAAAGACGGCACTAGCCTCCATCCAGCCT
CCATCTTTGTGTACACCTGCATGCAAGAAGACCTGGATATGGATGAGCCCTGAGAAACACAGGG
AGGGTCTTGAAGCAGAACAATCTACAGATGCACTCTTTTCCAACCTACAACTTCCTCAGCATCC
AGAGCCAGCCAAAGGATCAGTGGCGGACCAAGGTTCCCAGGTGAAGGTTGAGGAAGAATCCTGA
CCCAGAACTATGACTCTAGAGAACAGTGCACAGCCGAGTCCCCACTGGACTGCTGCTCCTTAGC
TGGTCTAAATAGAGCTTCTCTGTCCAA

hide sequence

RefSeq Acc Id:

XM_008767182 ⟹ XP_008765404

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,116,461 - 76,142,449 (+)	NCBI
Rnor_6.0	9	81,816,397 - 81,844,360 (+)	NCBI

Sequence:

show sequence

TTTACAGACTCGGATTGATTGCCCTTGCAAGGCAGGATGCAGAAACACAGGAGCAAGCTGATGG
AAAGCGACACCATGGAGAGCAGCCAGATGAAATGAGGGCAAAAACAGTGGTATTCCACACAGAC
TCCGACCAGAATGAAAAGCAGTGATTCACAGAGCACTGCAATAGACAGGCCTGGCTTTCACTTT
GAGAACAATTGTGAGATCAGGGTCAGTGAGGGGTGCAGGTTGGGAGGCATCAAGATAAAAGGCA
GCCAGGCTCCTTCTCCCTGGAGATGTGTTGCTGTTAACCTCAATCCATTCCCTTAATCCTTTTC
TGTCACTCCACCCCCACAACTCCTCCTGTTGACCAGTGCTCTGGGCCTTTAAGAGTTAGATAGG
CTGGACCTAGGAAAGCGCTCACACCTCTCCCCACTCCACTCCTCTCTGGCTGTAACTCTGCCAG
TTACAGCCGGCAAACTGCAGCAGGGTAGAAGCAGTCAAGTGCAAAGGAGAAAAGGAGTCTTCTC
ATTCTCAGTGGAGAGCATTGTGGAGCTCGGGAGACGACGCTCACAGACACAGGATTACTATCCT
ACCCACGGTGACTCTGGCACCAGCTGGTGGAGCAGTGGGGGATGGCATCTCAGATTCAAAAGCT
ACTGACCACTAATCAGGACCTGCTGCTGATGCAAAAAGGAACGATGATGCGCAAGGTGAGGACC
AAAAGCTGGAAGAAGCTAAGATACTTCAGACTTCAGGATGACGGCATGACGGTCTGGCATGGGC
GGCACCTTGAAAGCATATCCAAGCCCACTTTTTCAATCTCTGATGTGGAGAGGATCCGTAAGGG
CCAGGATTCTGAGCTGTTGCGCTATCTGGTGGAAGAGTTCCCCCTGGAGCAAGGCTTCACCATT
GTCTTTAATGGGCGCCGCCCCAACCTGGACCTAGTGGCCAACAGTGTTGAAGAGGCCCAGACTT
GGATGCGAGGACTCCAGCTGTTGGTGGATCTCGTCGCCAGAATGAACTACCAGGAGCAGCTGGA
TCAAATGTTGAGAGAATGGTTCCAACAAGCAGACAGAAACCAGGACAGCCGGATGAGTTTCAGA
GAAGCTCAACGGCTGCTGCTTCTGATGAATGTGGAAATGGATGAAGAATATGCCTTCAGTCTTT
TTCAGGAAGCAGATGTTTCCCAATCTAATACTCTGGATTCAGAAGAATTTGTACAGTTCTATAA
GGCCCTGACTAAGCGCACTGAGATTGAAGAACTATTTGAGAACTTTTCATCTGACAAACAGAAG
CTGACCTTGCTGGAATTTGTAGATTTCCTTAGAGAGGAACAGAAAGAAAGCGACCATTCCTCTG
ACCTTGCTCTGAAACTCATTGACCGCTATGAGCCTTCTGAGAATGGCAGATTGCTACGTGTGCT
GAGCAAGGATGGCTTCCTCAGCTACCTCTGCTCAGCGGATGGAAACATCTTCAACCCCGACTGC
CTCCCTATCTATCAGGATATGACTCAGCCTCTGAGTCACTACTACATCAACTCCTCTCACAACA
CCTACCTACTGGGTGACCAGTTTTGTGGCCAGAGCAGCGTTGAAGGATACATACGGGCCTTGAA
ACGGGGGTGCCGCTGTGTGGAGGTGGATACGTGGGACGGACCTGACGGAGAGCCCGTTGTTTAT
CATGGGCGTACACTGACCTCTCGTATCCTGTTCAAAGATGTTTTGGCAACATTAGCACAATATG
CCTTCCAGTCGTCAGACTACCCACTCATCTTATCTCTGGATAACCACTGCACTTGGGAACAGCA
GAAGACCATGGCACACCATCTGATTGCGATCCTGGGAGAGCAGCTGCTGAGTACCACCCTAGAG
GAACAACTGATTGATATAATGCCCTCGCCAGAGCAGCTTCGGGGGAAGATCTTGGTAAAAGGAA
AGAAGTTGAGAACAATTGAGGTTGTTGAGTCTGACAAGGAGGAAGAAGAGCTGGAGAAAGATGA
GGGGTCAGATCTGGACCCAGCCTCCGCTGAGCTTGACATGCAGTCTCAGCCCGAGTCCCAGGAG
CAGGCCTCTGGGAACAAGAGCAAGAACAAGAAGAAGGTTATGAAGTGTCCGATGTCTTGTCTGC
TTATCTGTGCTCATGTTTTGGCCCAGGCTCCTAATTCCATTCCTGAGTCCATTCTCTTGCCAAA
GAAGTTTCTTCTCCAGAGTTCCACAACCATCCTATGCCCAGACCTATCTGCCCTGGTTGTCTAC
TTGAGGACTGCTCCCTTCTGCAGCTTCACTCACTCCAAAGAAAACTACCACATCTACGACATTT
CATCCTTTTCTGAGTCCAAGGCCAAGAACCTCATCAGGGAGGCAGGCAATGAGTTTGTACAGCA
CAATGCCAGACAGCTATGCCGTGTATACCCCAGTGGTCTGAGGACAGATTCATCGAACTATAAC
CCCCAGGAACACTGGAATGTTGGCTGCCAAATGGTGGCCATGAACATGCAGACTGCAGGAAGTG
CAATGGACATCTGTGATGGGCTCTTCCGCCAGAATGGGGGCTCTGGCTATGTGCTGAAGCCAGA
ATTCCTGAGAGATACCCAGAGTTCCTTCAATCCCATGAAGCCCGTTAGTCTTTATAAAGCCCAG
ATCCTTGTAGTCCAGGTGATCAGTGGTCAAAGACTCCCCAAAGTGGACAAAACCAAAGAGACAA
CCGTTGTGGATCCACTGGTGAGAGTAGAGCTCTATGGTGTTCCTGAAGACACAAAGCAGCAAGA
GACCAGCTATGTGGAGAACAATGGTATTAATCCATACTGGGGGGAGACATTCTATTTCCAGATC
CAGGTGCCTGAACTTGCTATGCTGCGTTTTGTGGTAAAGGATTATAGCAGGACATCCCGAAATA
ACTTTATAGGCCAATACACCCTGCCTTGGACCTGCATGAAACATGGTGAGACAAACCTTAGACT
CTTGGCCAATATCCCAACTGTGGCTCCCTTCCTGATCCAATTCTTCTGCCTGTTTCTAGGCTAC
CGACATGTATCCTTGCTCTCCAAAGACGGCACTAGCCTCCATCCAGCCTCCATCTTTGTGTACA
CCTGCATGCAAGAAGACCTGGATATGGATGAGCCCTGAGAAACACAGGGAGGGTCTTGAAGCAG
AACAATCTACAGATGCACTCTTTTCCAACCTACAACTTCCTCAGCATCCAGAGCCAGCCAAAGG
ATCAGTGGCGGACCAAGGTTCCCAGGTGAAGGTTGAGGAAGAATCCTGACCCAGAACTATGACT
CTAGAGAACAGTGCACAGCCGAGTCCCCACTGGACTGCTGCTCCTTAGCTGGTCTAAATAGAGC
TTCTCTGTCCAA

hide sequence

RefSeq Acc Id:

XM_008767184 ⟹ XP_008765406

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,115,524 - 76,142,449 (+)	NCBI
Rnor_6.0	9	81,816,397 - 81,844,360 (+)	NCBI

Sequence:

show sequence

TTTACAGACTCGGATTGATTGCCCTTGCAAGGCAGGATGCAGAAACACAGGAGCAAGCTGATGG
AAAGCGACACCATGGAGAGCAGCCAGATGAAATGAGGGCAAAAACAGTGGTATTCCACACAGAC
TCCGACCAGAATGAAAAGCAGTGATTCACAGAGCACTGCAATAGACAGGCCTGGCTTTCACTTT
GAGAACAATTGTGAGATCAGGGTCAGTGAGGGGTGCAGGTTGGGAGGCATCAAGATAAAAGGCA
GCCAGGCTCCTTCTCCCTGGAGATGTGTTGCTGTTAACCTCAATCCATTCCCTTAATCCTTTTC
TGTCACTCCACCCCCACAACTCCTCCTGTTGACCAGTGCTCTGGGCCTTTAAGAGTTAGATAGG
CTGGACCTAGGAAAGCGCTCACACCTCTCCCCACTCCACTCCTCTCTGGCTGTAACTCTGCCAG
TTACAGCCGGCAAACTGCAGCAGGGTAGAAGCAGTCAAGTGCAAAGGAGAAAAGGAGTCTTCTC
ATTCTCAGTGGAGAGCATTGTGGAGCTCGGGAGACGACGCTCACAGACACAGGATTACTATCCT
ACCCACGGATTCACCCAAAGCCCTTTGCTGCTCCTTGTTCCTTTAGGTGACTCTGGCACCAGCT
GGTGGAGCAGTGGGGGATGGCATCTCAGATTCAAAAGCTACTGACCACTAATCAGGACCTGCTG
CTGATGCAAAAAGGAACGATGATGCGCAAGGTGAGGACCAAAAGCTGGAAGAAGCTAAGATACT
TCAGACTTCAGGATGACGGCATGACGGTCTGGCATGGGCGGCACCTTGAAAGCATATCCAAGCC
CACTTTTTCAATCTCTGATGTGGAGAGGATCCGTAAGGGCCAGGATTCTGAGCTGTTGCGCTAT
CTGGTGGAAGAGTTCCCCCTGGAGCAAGGCTTCACCATTGTCTTTAATGGGCGCCGCCCCAACC
TGGACCTAGTGGCCAACAGTGTTGAAGAGGCCCAGACTTGGATGCGAGGACTCCAGCTGTTGGT
GGATCTCGTCGCCAGAATGAACTACCAGGAGCAGCTGGATCAAATGTTGAGAGAATGGTTCCAA
CAAGCAGACAGAAACCAGGACAGCCGGATGAGTTTCAGAGAAGCTCAACGGCTGCTGCTTCTGA
TGAATGTGGAAATGGATGAAGAATATGCCTTCAGTCTTTTTCAGGAAGCAGATGTTTCCCAATC
TAATACTCTGGATTCAGAAGAATTTGTACAGTTCTATAAGGCCCTGACTAAGCGCACTGAGATT
GAAGAACTATTTGAGAACTTTTCATCTGACAAACAGAAGCTGACCTTGCTGGAATTTGTAGATT
TCCTTAGAGAGGAACAGAAAGAAAGCGACCATTCCTCTGACCTTGCTCTGAAACTCATTGACCG
CTATGAGCCTTCTGAGAATGGCAGATTGCTACGTGTGCTGAGCAAGGATGGCTTCCTCAGCTAC
CTCTGCTCAGCGGATGGAAACATCTTCAACCCCGACTGCCTCCCTATCTATCAGGATATGACTC
AGCCTCTGAGTCACTACTACATCAACTCCTCTCACAACACCTACCTACTGGGTGACCAGTTTTG
TGGCCAGAGCAGCGTTGAAGGATACATACGGGCCTTGAAACGGGGGTGCCGCTGTGTGGAGGTG
GATACGTGGGACGGACCTGACGGAGAGCCCGTTGTTTATCATGGGCGTACACTGACCTCTCGTA
TCCTGTTCAAAGATGTTTTGGCAACATTAGCACAATATGCCTTCCAGTCGTCAGACTACCCACT
CATCTTATCTCTGGATAACCACTGCACTTGGGAACAGCAGAAGACCATGGCACACCATCTGATT
GCGATCCTGGGAGAGCAGCTGCTGAGTACCACCCTAGAGGAACAACTGATTGATATAATGCCCT
CGCCAGAGCAGCTTCGGGGGAAGATCTTGGTAAAAGGAAAGAAGTTGAGAACAATTGAGGTTGT
TGAGTCTGACAAGGAGGAAGAAGAGCTGGAGAAAGATGAGGGGTCAGATCTGGACCCAGCCTCC
GCTGAGCTTGACATGCAGTCTCAGCCCGAGTCCCAGGAGCAGGCCTCTGGGAACAAGAGCAAGA
ACAAGAAGAAGGTTATGAAGTGTCCGATGTCTTGTCTGCTTATCTGTGCTCATGTTTTGGCCCA
GGCTCCTAATTCCATTCCTGAGTCCATTCTCTTGCCAAAGAAGTTTCTTCTCCAGAGTTCCACA
ACCATCCTATGCCCAGACCTATCTGCCCTGGTTGTCTACTTGAGGACTGCTCCCTTCTGCAGCT
TCACTCACTCCAAAGAAAACTACCACATCTACGACATTTCATCCTTTTCTGAGTCCAAGGCCAA
GAACCTCATCAGGGAGGCAGGCAATGAGTTTGTACAGCACAATGCCAGACAGCTATGCCGTGTA
TACCCCAGTGGTCTGAGGACAGATTCATCGAACTATAACCCCCAGGAACACTGGAATGTTGGCT
GCCAAATGGTGGCCATGAACATGCAGACTGCAGGAAGTGCAATGGACATCTGTGATGGGCTCTT
CCGCCAGAATGGGGGCTCTGGCTATGTGCTGAAGCCAGAATTCCTGAGAGATACCCAGAGTTCC
TTCAATCCCATGAAGCCCGTTAGTCTTTATAAAGCCCAGATCCTTGTAGTCCAGGTGATCAGTG
GTCAAAGACTCCCCAAAGTGGACAAAACCAAAGAGACAACCGTTGTGGATCCACTGGTGAGAGT
AGAGCTCTATGGTGTTCCTGAAGACACAAAGCAGCAAGAGACCAGCTATGTGGAGAACAATGGT
ATTAATCCATACTGGGGGGAGACATTCTATTTCCAGATCCAGGTGCCTGAACTTGCTATGCTGC
GTTTTGTGGTAAAGGATTATAGCAGGACATCCCGAAATAACTTTATAGGCCAATACACCCTGCC
TTGGACCTGCATGAAACATGGTGAGACAAACCTTAGACTCTTGGCCAATATCCCAACTGTGGCT
CCCTTCCTGATCCAATTCTTCTGCCTGTTTCTAGGCTACCGACATGTATCCTTGCTCTCCAAAG
ACGGCACTAGCCTCCATCCAGCCTCCATCTTTGTGTACACCTGCATGCAAGAAGACCTGGATAT
GGATGAGCCCTGAGAAACACAGGGAGGGTCTTGAAGCAGAACAATCTACAGATGCACTCTTTTC
CAACCTACAACTTCCTCAGCATCCAGAGCCAGCCAAAGGATCAGTGGCGGACCAAGGTTCCCAG
GTGAAGGTTGAGGAAGAATCCTGACCCAGAACTATGACTCTAGAGAACAGTGCACAGCCGAGTC
CCCACTGGACTGCTGCTCCTTAGCTGGTCTAAATAGAGCTTCTCTGTCCAA

hide sequence

RefSeq Acc Id:

XM_008767187 ⟹ XP_008765409

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,115,523 - 76,142,449 (+)	NCBI
Rnor_6.0	9	81,816,395 - 81,844,360 (+)	NCBI

Sequence:

show sequence

TTTTTACAGACTCGGATTGATTGCCCTTGCAAGGCAGGATGCAGAAACACAGGAGCAAGCTGAT
GGAAAGCGACACCATGGAGAGCAGCCAGATGAAATGAGGGCAAAAACAGTGGTATTCCACACAG
ACTCCGACCAGAATGAAAAGCAGTGATTCACAGAGCACTGCAATAGACAGGCCTGGCTTTCACT
TTGAGAACAATTGTGAGATCAGGGTCAGTGAGGGGTGCAGGTTGGGAGGCATCAAGATAAAAGG
CAGCCAGGCTCCTTCTCCCTGGAGATGTGTTGCTGTTAACCTCAATCCATTCCCTTAATCCTTT
TCTGTCACTCCACCCCCACAACTCCTCCTGTTGACCAGTGCTCTGGGCCTTTAAGAGTTAGATA
GGCTGGACCTAGGAAAGCGCTCACACCTCTCCCCACTCCACTCCTCTCTGGCTGTAACTCTGCC
AGTTACAGCCGGCAAACTGCAGCAGGGTAGAAGCAGTCAAGTGCAAAGGAGAAAAGGAGTCTTC
TCATTCTCAGTGGAGAGCATTGTGGAGCTCGGGAGACGACGCTCACAGACACAGGATTACTATC
CTACCCACGGTGACTCTGGCACCAGCTGGTGGAGCAGTGGGGGATGGCATCTCAGATTCAAAAG
CTACTGACCACTAATCAGGACCTGCTGCTGATGCAAAAAGGAACGATGATGCGCAAGGTGAGGA
CCAAAAGCTGGAAGAAGCTAAGATACTTCAGACTTCAGGATGACGGCATGACGGTCTGGCATGG
GCGGCACCTTGAAAGCATATCCAAGCCCACTTTTTCAATCTCTGATGTGGAGAGGATCCGTAAG
GGCCAGGATTCTGAGCTGTTGCGCTATCTGGTGGAAGAGTTCCCCCTGGAGCAAGGCTTCACCA
TTGTCTTTAATGGGCGCCGCCCCAACCTGGACCTAGTGGCCAACAGTGTTGAAGAGGCCCAGAC
TTGGATGCGAGGACTCCAGCTGTTGGTGGATCTCGTCGCCAGAATGAACTACCAGGAGCAGCTG
GATCAAATGTTGAGAGAATGGTTCCAACAAGCAGACAGAAACCAGGACAGCCGGATGAGTTTCA
GAGAAGCTCAACGGCTGCTGCTTCTGATGAATGTGGAAATGGATGAAGAATATGCCTTCAGTCT
TTTTCAGGAAGCAGATGTTTCCCAATCTAATACTCTGGATTCAGAAGAATTTGTACAGTTCTAT
AAGGCCCTGACTAAGCGCACTGAGATTGAAGAACTATTTGAGAACTTTTCATCTGACAAACAGA
AGCTGACCTTGCTGGAATTTGTAGATTTCCTTAGAGAGGAACAGAAAGAAAGCGACCATTCCTC
TGACCTTGCTCTGAAACTCATTGACCGCTATGAGCCTTCTGAGAATGGCAGATTGCTACGTGTG
CTGAGCAAGGATGGCTTCCTCAGCTACCTCTGCTCAGCGGATGGAAACATCTTCAACCCCGACT
GCCTCCCTATCTATCAGGATATGACTCAGCCTCTGAGTCACTACTACATCAACTCCTCTCACAA
CACCTACCTACTGGGTGACCAGTTTTGTGGCCAGAGCAGCGTTGAAGGATACATACGGGCCTTG
AAACGGGGGTGCCGCTGTGTGGAGGTGGATACGTGGGACGGACCTGACGGAGAGCCCGTTGTTT
ATCATGGGCGTACACTGACCTCTCGTATCCTGTTCAAAGATGTTTTGGCAACATTAGCACAATA
TGCCTTCCAGTCGTCAGACTACCCACTCATCTTATCTCTGGATAACCACTGCACTTGGGAACAG
CAGAAGACCATGGCACACCATCTGATTGCGATCCTGGGAGAGCAGCTGCTGAGTACCACCCTAG
AGGAACAACTGATTGATATAATGCCCTCGCCAGAGCTTCGGGGGAAGATCTTGGTAAAAGGAAA
GAAGTTGAGAACAATTGAGGTTGTTGAGTCTGACAAGGAGGAAGAAGAGCTGGAGAAAGATGAG
GGGTCAGATCTGGACCCAGCCTCCGCTGAGCTTGACATGCAGTCTCAGCCCGAGTCCCAGGAGC
AGGCCTCTGGGAACAAGAGCAAGAACAAGAAGAAGGTTATGAAGTGTCCGATGTCTTGTCTGCT
TATCTGTGCTCATGTTTTGGCCCAGGCTCCTAATTCCATTCCTGAGTCCATTCTCTTGCCAAAG
AAGTTTCTTCTCCAGAGTTCCACAACCATCCTATGCCCAGACCTATCTGCCCTGGTTGTCTACT
TGAGGACTGCTCCCTTCTGCAGCTTCACTCACTCCAAAGAAAACTACCACATCTACGACATTTC
ATCCTTTTCTGAGTCCAAGGCCAAGAACCTCATCAGGGAGGCAGGCAATGAGTTTGTACAGCAC
AATGCCAGACAGCTATGCCGTGTATACCCCAGTGGTCTGAGGACAGATTCATCGAACTATAACC
CCCAGGAACACTGGAATGTTGGCTGCCAAATGGTGGCCATGAACATGCAGACTGCAGGAAGTGC
AATGGACATCTGTGATGGGCTCTTCCGCCAGAATGGGGGCTCTGGCTATGTGCTGAAGCCAGAA
TTCCTGAGAGATACCCAGAGTTCCTTCAATCCCATGAAGCCCGTTAGTCTTTATAAAGCCCAGA
TCCTTGTAGTCCAGGTGATCAGTGGTCAAAGACTCCCCAAAGTGGACAAAACCAAAGAGACAAC
CGTTGTGGATCCACTGGTGAGAGTAGAGCTCTATGGTGTTCCTGAAGACACAAAGCAGCAAGAG
ACCAGCTATGTGGAGAACAATGGTATTAATCCATACTGGGGGGAGACATTCTATTTCCAGATCC
AGGTGCCTGAACTTGCTATGCTGCGTTTTGTGGTAAAGGATTATAGCAGGACATCCCGAAATAA
CTTTATAGGCCAATACACCCTGCCTTGGACCTGCATGAAACATGGTGAGACAAACCTTAGACTC
TTGGCCAATATCCCAACTGTGGCTCCCTTCCTGATCCAATTCTTCTGCCTGTTTCTAGGCTACC
GACATGTATCCTTGCTCTCCAAAGACGGCACTAGCCTCCATCCAGCCTCCATCTTTGTGTACAC
CTGCATGCAAGAAGACCTGGATATGGATGAGCCCTGAGAAACACAGGGAGGGTCTTGAAGCAGA
ACAATCTACAGATGCACTCTTTTCCAACCTACAACTTCCTCAGCATCCAGAGCCAGCCAAAGGA
TCAGTGGCGGACCAAGGTTCCCAGGTGAAGGTTGAGGAAGAATCCTGACCCAGAACTATGACTC
TAGAGAACAGTGCACAGCCGAGTCCCCACTGGACTGCTGCTCCTTAGCTGGTCTAAATAGAGCT
TCTCTGTCCAA

hide sequence

RefSeq Acc Id:

XM_008767188 ⟹ XP_008765410

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,115,524 - 76,142,449 (+)	NCBI
Rnor_6.0	9	81,816,398 - 81,844,360 (+)	NCBI

Sequence:

show sequence

TTACAGACTCGGATTGATTGCCCTTGCAAGGCAGGATGCAGAAACACAGGAGCAAGCTGATGGA
AAGCGACACCATGGAGAGCAGCCAGATGAAATGAGGGCAAAAACAGTGGTATTCCACACAGACT
CCGACCAGAATGAAAAGCAGTGATTCACAGAGCACTGCAATAGACAGGCCTGGCTTTCACTTTG
AGAACAATTGTGAGATCAGGGTCAGTGAGGGGTGCAGGTTGGGAGGCATCAAGATAAAAGGCAG
CCAGGCTCCTTCTCCCTGGAGATGTGTTGCTGTTAACCTCAATCCATTCCCTTAATCCTTTTCT
GTCACTCCACCCCCACAACTCCTCCTGTTGACCAGTGCTCTGGGCCTTTAAGAGTTAGATAGGC
TGGACCTAGGAAAGCGCTCACACCTCTCCCCACTCCACTCCTCTCTGGCTGTAACTCTGCCAGT
TACAGCCGGCAAACTGCAGCAGGGTAGAAGCAGTCAAGTGCAAAGGAGAAAAGGAGTCTTCTCA
TTCTCAGTGGAGAGCATTGTGGAGCTCGGGAGACGACGCTCACAGACACAGGATTACTATCCTA
CCCACGGTGACTCTGGCACCAGCTGGTGGAGCAGTGGGGGATGGCATCTCAGATTCAAAAGCTA
CTGACCACTAATCAGGACCTGCTGCTGATGCAAAAAGGAACGATGATGCGCAAGGTGAGGACCA
AAAGCTGGAAGAAGCTAAGATACTTCAGACTTCAGGATGACGGCATGACGGTCTGGCATGGGCG
GCACCTTGAAAGCATATCCAAGCCCACTTTTTCAATCTCTGATGTGGAGAGGATCCGTAAGGGC
CAGGATTCTGAGCTGTTGCGCTATCTGGTGGAAGAGTTCCCCCTGGAGCAAGGCTTCACCATTG
TCTTTAATGGGCGCCGCCCCAACCTGGACCTAGTGGCCAACAGTGTTGAAGAGGCCCAGACTTG
GATGCGAGGACTCCAGCTGTTGGTGGATCTCGTCGCCAGAATGAACTACCAGGAGCAGCTGGAT
CAAATGTTGAGAGAATGGTTCCAACAAGCAGACAGAAACCAGGACAGCCGGATGAGTTTCAGAG
AAGCTCAACGGCTGCTGCTTCTGATGAATGTGGAAATGGATGAAGAATATGCCTTCAGTCTTTT
TCAGGAAGCAGATGTTTCCCAATCTAATACTCTGGATTCAGAAGAATTTGTACAGTTCTATAAG
GCCCTGACTAAGCGCACTGAGATTGAAGAACTATTTGAGAACTTTTCATCTGACAAACAGAAGC
TGACCTTGCTGGAATTTGTAGATTTCCTTAGAGAGGAACAGAAAGAAAGCGACCATTCCTCTGA
CCTTGCTCTGAAACTCATTGACCGCTATGAGCCTTCTGAGAATGGCAGATTGCTACGTGTGCTG
AGCAAGGATGGCTTCCTCAGCTACCTCTGCTCAGCGGATGGAAACATCTTCAACCCCGACTGCC
TCCCTATCTATCAGGATATGACTCAGCCTCTGAGTCACTACTACATCAACTCCTCTCACAACAC
CTACCTACTGGGTGACCAGTTTTGTGGCCAGAGCAGCGTTGAAGGATACATACGGGCCTTGAAA
CGGGGGTGCCGCTGTGTGGAGGTGGATACGTGGGACGGACCTGACGGAGAGCCCGTTGTTTATC
ATGGGCGTACACTGACCTCTCGTATCCTGTTCAAAGATGTTTTGGCAACATTAGCACAATATGC
CTTCCAGTCGTCAGACTACCCACTCATCTTATCTCTGGATAACCACTGCACTTGGGAACAGCAG
AAGACCATGGCACACCATCTGATTGCGATCCTGGGAGAGCAGCTGCTGAGTACCACCCTAGAGG
AACAACTGATTGATATAATGCCCTCGCCAGAGCAGCTTCGGGGGAAGATCTTGGTAAAAGGAAA
GAAGTTGAGAACAATTGAGGTTGTTGAGTCTGACAAGGAGGAAGAAGAGCTGGAGAAAGATGAG
GGGTCAGATCTGGACCCAGCCTCCGCTGAGCTTGACATGCAGTCTCAGCCCGAGTCCCAGGAGC
AGGCCTCTGGGAACAAGAGCAAGAACAAGAAGAAGGCTCCTAATTCCATTCCTGAGTCCATTCT
CTTGCCAAAGAAGTTTCTTCTCCAGAGTTCCACAACCATCCTATGCCCAGACCTATCTGCCCTG
GTTGTCTACTTGAGGACTGCTCCCTTCTGCAGCTTCACTCACTCCAAAGAAAACTACCACATCT
ACGACATTTCATCCTTTTCTGAGTCCAAGGCCAAGAACCTCATCAGGGAGGCAGGCAATGAGTT
TGTACAGCACAATGCCAGACAGCTATGCCGTGTATACCCCAGTGGTCTGAGGACAGATTCATCG
AACTATAACCCCCAGGAACACTGGAATGTTGGCTGCCAAATGGTGGCCATGAACATGCAGACTG
CAGGAAGTGCAATGGACATCTGTGATGGGCTCTTCCGCCAGAATGGGGGCTCTGGCTATGTGCT
GAAGCCAGAATTCCTGAGAGATACCCAGAGTTCCTTCAATCCCATGAAGCCCGTTAGTCTTTAT
AAAGCCCAGATCCTTGTAGTCCAGGTGATCAGTGGTCAAAGACTCCCCAAAGTGGACAAAACCA
AAGAGACAACCGTTGTGGATCCACTGGTGAGAGTAGAGCTCTATGGTGTTCCTGAAGACACAAA
GCAGCAAGAGACCAGCTATGTGGAGAACAATGGTATTAATCCATACTGGGGGGAGACATTCTAT
TTCCAGATCCAGGTGCCTGAACTTGCTATGCTGCGTTTTGTGGTAAAGGATTATAGCAGGACAT
CCCGAAATAACTTTATAGGCCAATACACCCTGCCTTGGACCTGCATGAAACATGGTGAGACAAA
CCTTAGACTCTTGGCCAATATCCCAACTGTGGCTCCCTTCCTGATCCAATTCTTCTGCCTGTTT
CTAGGCTACCGACATGTATCCTTGCTCTCCAAAGACGGCACTAGCCTCCATCCAGCCTCCATCT
TTGTGTACACCTGCATGCAAGAAGACCTGGATATGGATGAGCCCTGAGAAACACAGGGAGGGTC
TTGAAGCAGAACAATCTACAGATGCACTCTTTTCCAACCTACAACTTCCTCAGCATCCAGAGCC
AGCCAAAGGATCAGTGGCGGACCAAGGTTCCCAGGTGAAGGTTGAGGAAGAATCCTGACCCAGA
ACTATGACTCTAGAGAACAGTGCACAGCCGAGTCCCCACTGGACTGCTGCTCCTTAGCTGGTCT
AAATAGAGCTTCTCTGTCCAA

hide sequence

RefSeq Acc Id:

XM_008767189 ⟹ XP_008765411

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,115,525 - 76,142,449 (+)	NCBI
Rnor_6.0	9	81,816,400 - 81,844,360 (+)	NCBI

Sequence:

show sequence

ACAGACTCGGATTGATTGCCCTTGCAAGGCAGGATGCAGAAACACAGGAGCAAGCTGATGGAAA
GCGACACCATGGAGAGCAGCCAGATGAAATGAGGGCAAAAACAGTGGTATTCCACACAGACTCC
GACCAGAATGAAAAGCAGTGATTCACAGAGCACTGCAATAGACAGGCCTGGCTTTCACTTTGAG
AACAATTGTGAGATCAGGGTCAGTGAGGGGTGCAGGTTGGGAGGCATCAAGATAAAAGGCAGCC
AGGCTCCTTCTCCCTGGAGATGTGTTGCTGTTAACCTCAATCCATTCCCTTAATCCTTTTCTGT
CACTCCACCCCCACAACTCCTCCTGTTGACCAGTGCTCTGGGCCTTTAAGAGTTAGATAGGCTG
GACCTAGGAAAGCGCTCACACCTCTCCCCACTCCACTCCTCTCTGGCTGTAACTCTGCCAGTTA
CAGCCGGCAAACTGCAGCAGGGTAGAAGCAGTCAAGTGCAAAGGAGAAAAGGAGTCTTCTCATT
CTCAGTGGAGAGCATTGTGGAGCTCGGGAGACGACGCTCACAGACACAGGATTACTATCCTACC
CACGGTGACTCTGGCACCAGCTGGTGGAGCAGTGGGGGATGGCATCTCAGATTCAAAAGCTACT
GACCACTAATCAGGACCTGCTGCTGATGCAAAAAGGAACGATGATGCGCAAGGTGAGGACCAAA
AGCTGGAAGAAGCTAAGATACTTCAGACTTCAGGATGACGGCATGACGGTCTGGCATGGGCGGC
ACCTTGAAAGCATATCCAAGCCCACTTTTTCAATCTCTGATGTGGAGAGGATCCGTAAGGGCCA
GGATTCTGAGCTGTTGCGCTATCTGGTGGAAGAGTTCCCCCTGGAGCAAGGCTTCACCATTGTC
TTTAATGGGCGCCGCCCCAACCTGGACCTAGTGGCCAACAGTGTTGAAGAGGCCCAGACTTGGA
TGCGAGGACTCCAGCTGTTGGTGGATCTCGTCGCCAGAATGAACTACCAGGAGCAGCTGGATCA
AATGTTGAGAGAATGGTTCCAACAAGCAGACAGAAACCAGGACAGCCGGATGAGTTTCAGAGAA
GCTCAACGGCTGCTGCTTCTGATGAATGTGGAAATGGATGAAGAATATGCCTTCAGTCTTTTTC
AGGAAGCAGATGTTTCCCAATCTAATACTCTGGATTCAGAAGAATTTGTACAGTTCTATAAGGC
CCTGACTAAGCGCACTGAGATTGAAGAACTATTTGAGAACTTTTCATCTGACAAACAGAAGCTG
ACCTTGCTGGAATTTGTAGATTTCCTTAGAGAGGAACAGAAAGAAAGCGACCATTCCTCTGACC
TTGCTCTGAAACTCATTGACCGCTATGAGCCTTCTGAGAATGGCAGATTGCTACGTGTGCTGAG
CAAGGATGGCTTCCTCAGCTACCTCTGCTCAGCGGATGGAAACATCTTCAACCCCGACTGCCTC
CCTATCTATCAGGATATGACTCAGCCTCTGAGTCACTACTACATCAACTCCTCTCACAACACCT
ACCTACTGGGTGACCAGTTTTGTGGCCAGAGCAGCGTTGAAGGATACATACGGGCCTTGAAACG
GGGGTGCCGCTGTGTGGAGGTGGATACGTGGGACGGACCTGACGGAGAGCCCGTTGTTTATCAT
GGGCGTACACTGACCTCTCGTATCCTGTTCAAAGATGTTTTGGCAACATTAGCACAATATGCCT
TCCAGTCGTCAGACTACCCACTCATCTTATCTCTGGATAACCACTGCACTTGGGAACAGCAGAA
GACCATGGCACACCATCTGATTGCGATCCTGGGAGAGCAGCTGCTGAGTACCACCCTAGAGGAA
CAACTGATTGATATAATGCCCTCGCCAGAGCAGCTTCGGGGGAAGATCTTGGTAAAAGGAAAGA
AGTTGAGAACAATTGAGGTTGTTGAGTCTGACAAGGAGGAAGAAGAGCTGGAGAAAGATGAGGG
GTCAGATCTGGACCCAGCCTCCGCTGAGCTTGACATGCAGTCTCAGCCCGAGTCCCAGGAGCAG
GCCTCTGGGAACAAGAGCAAGAACAAGAAGAAGGTTATGAAGTGTCCGATGTCTTGTCTGCTTA
TCTGTGCTCATGTTTTGGCCCAGGCTCCTAATTCCATTCCTGAGTCCATTCTCTTGCCAAAGAA
GTTTCTTCTCCAGAGTTCCACAACCATCCTATGCCCAGACCTATCTGCCCTGGTTGTCTACTTG
AGGACTGCTCCCTTCTGCAGCTTCACTCACTCCAAAGAAAACTACCACATCTACGACATTTCAT
CCTTTTCTGAGTCCAAGGCCAAGAACCTCATCAGGGAGGCAGGCAATGAGTTTGTACAGCACAA
TGCCAGACAGCTATGCCGTGTATACCCCAGTGGTCTGAGGACAGATTCATCGAACTATAACCCC
CAGGAACACTGGAATGTTGGCTGCCAAATGGTGGCCATGAACATGCAGACTGCAGGAAGTGCAA
TGGACATCTGTGATGGGCTCTTCCGCCAGAATGGGGGCTCTGGCTATGTGCTGAAGCCAGAATT
CCTGAGAGATACCCAGAGTTCCTTCAATCCCATGAAGCCCGTTAGTCTTTATAAAGCCCAGATC
CTTGTAGTCCAGGTGATCAGTGGTCAAAGACTCCCCAAAGTGGACAAAACCAAAGAGACAACCG
TTGTGGATCCACTGGTGAGAGTAGAGCTCTATGGTGTTCCTGAAGACACAAAGCAGCAAGAGAC
CAGCTATGTGGAGAACAATGGTATTAATCCATACTGGGGGGAGACATTCTATTTCCAGATCCAG
GTGCCTGAACTTGCTATGCTGCGTTTTGTGGTAAAGGATTATAGCAGGACATCCCGAAATAACT
TTATAGGCCAATACACCCTGCCTTGGACCTGCATGAAACATGGCTACCGACATGTATCCTTGCT
CTCCAAAGACGGCACTAGCCTCCATCCAGCCTCCATCTTTGTGTACACCTGCATGCAAGAAGAC
CTGGATATGGATGAGCCCTGAGAAACACAGGGAGGGTCTTGAAGCAGAACAATCTACAGATGCA
CTCTTTTCCAACCTACAACTTCCTCAGCATCCAGAGCCAGCCAAAGGATCAGTGGCGGACCAAG
GTTCCCAGGTGAAGGTTGAGGAAGAATCCTGACCCAGAACTATGACTCTAGAGAACAGTGCACA
GCCGAGTCCCCACTGGACTGCTGCTCCTTAGCTGGTCTAAATAGAGCTTCTCTGTCCAA

hide sequence

RefSeq Acc Id:

XM_008767190 ⟹ XP_008765412

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,115,525 - 76,142,449 (+)	NCBI
Rnor_6.0	9	81,816,401 - 81,844,360 (+)	NCBI

Sequence:

show sequence

CAGACTCGGATTGATTGCCCTTGCAAGGCAGGATGCAGAAACACAGGAGCAAGCTGATGGAAAG
CGACACCATGGAGAGCAGCCAGATGAAATGAGGGCAAAAACAGTGGTATTCCACACAGACTCCG
ACCAGAATGAAAAGCAGTGATTCACAGAGCACTGCAATAGACAGGCCTGGCTTTCACTTTGAGA
ACAATTGTGAGATCAGGGTCAGTGAGGGGTGCAGGTTGGGAGGCATCAAGATAAAAGGCAGCCA
GGCTCCTTCTCCCTGGAGATGTGTTGCTGTTAACCTCAATCCATTCCCTTAATCCTTTTCTGTC
ACTCCACCCCCACAACTCCTCCTGTTGACCAGTGCTCTGGGCCTTTAAGAGTTAGATAGGCTGG
ACCTAGGAAAGCGCTCACACCTCTCCCCACTCCACTCCTCTCTGGCTGTAACTCTGCCAGTTAC
AGCCGGCAAACTGCAGCAGGGTAGAAGCAGTCAAGTGCAAAGGAGAAAAGGAGTCTTCTCATTC
TCAGTGGAGAGCATTGTGGAGCTCGGGAGACGACGCTCACAGACACAGGATTACTATCCTACCC
ACGGTGACTCTGGCACCAGCTGGTGGAGCAGTGGGGGATGGCATCTCAGATTCAAAAGCTACTG
ACCACTAATCAGGACCTGCTGCTGATGCAAAAAGGAACGATGATGCGCAAGGTGAGGACCAAAA
GCTGGAAGAAGCTAAGATACTTCAGACTTCAGGATGACGGCATGACGGTCTGGCATGGGCGGCA
CCTTGAAAGCATATCCAAGCCCACTTTTTCAATCTCTGATGTGGAGAGGATCCGTAAGGGCCAG
GATTCTGAGCTGTTGCGCTATCTGGTGGAAGAGTTCCCCCTGGAGCAAGGCTTCACCATTGTCT
TTAATGGGCGCCGCCCCAACCTGGACCTAGTGGCCAACAGTGTTGAAGAGGCCCAGACTTGGAT
GCGAGGACTCCAGCTGTTGGTGGATCTCGTCGCCAGAATGAACTACCAGGAGCAGCTGGATCAA
ATGTTGAGAGAATGGTTCCAACAAGCAGACAGAAACCAGGACAGCCGGATGAGTTTCAGAGAAG
CTCAACGGCTGCTGCTTCTGATGAATGTGGAAATGGATGAAGAATATGCCTTCAGTCTTTTTCA
GGAAGCAGATGTTTCCCAATCTAATACTCTGGATTCAGAAGAATTTGTACAGTTCTATAAGGCC
CTGACTAAGCGCACTGAGATTGAAGAACTATTTGAGAACTTTTCATCTGACAAACAGAAGCTGA
CCTTGCTGGAATTTGTAGATTTCCTTAGAGAGGAACAGAAAGAAAGCGACCATTCCTCTGACCT
TGCTCTGAAACTCATTGACCGCTATGAGCCTTCTGAGAATGGCAGATTGCTACGTGTGCTGAGC
AAGGATGGCTTCCTCAGCTACCTCTGCTCAGCGGATGGAAACATCTTCAACCCCGACTGCCTCC
CTATCTATCAGGATATGACTCAGCCTCTGAGTCACTACTACATCAACTCCTCTCACAACACCTA
CCTACTGGGTGACCAGTTTTGTGGCCAGAGCAGCGTTGAAGGATACATACGGGCCTTGAAACGG
GGGTGCCGCTGTGTGGAGGTGGATACGTGGGACGGACCTGACGGAGAGCCCGTTGTTTATCATG
GGCGTACACTGACCTCTCGTATCCTGTTCAAAGATGTTTTGGCAACATTAGCACAATATGCCTT
CCAGTCGTCAGACTACCCACTCATCTTATCTCTGGATAACCACTGCACTTGGGAACAGCAGAAG
ACCATGGCACACCATCTGATTGCGATCCTGGGAGAGCAGCTGCTGAGTACCACCCTAGAGGAAC
AACTGATTGATATAATGCCCTCGCCAGAGCAGCTTCGGGGGAAGATCTTGGTAAAAGGAAAGAA
GTTGAGAACAATTGAGGTTGTTGAGTCTGACAAGGAGGAAGAAGAGCTGGAGAAAGATGAGGGG
TCAGATCTGGACCCAGCCTCCGCTGAGCTTGACATGCAGTCTCAGCCCGAGTCCCAGGAGCAGG
CCTCTGGGAACAAGAGCAAGAACAAGAAGAAGTTTCTTCTCCAGAGTTCCACAACCATCCTATG
CCCAGACCTATCTGCCCTGGTTGTCTACTTGAGGACTGCTCCCTTCTGCAGCTTCACTCACTCC
AAAGAAAACTACCACATCTACGACATTTCATCCTTTTCTGAGTCCAAGGCCAAGAACCTCATCA
GGGAGGCAGGCAATGAGTTTGTACAGCACAATGCCAGACAGCTATGCCGTGTATACCCCAGTGG
TCTGAGGACAGATTCATCGAACTATAACCCCCAGGAACACTGGAATGTTGGCTGCCAAATGGTG
GCCATGAACATGCAGACTGCAGGAAGTGCAATGGACATCTGTGATGGGCTCTTCCGCCAGAATG
GGGGCTCTGGCTATGTGCTGAAGCCAGAATTCCTGAGAGATACCCAGAGTTCCTTCAATCCCAT
GAAGCCCGTTAGTCTTTATAAAGCCCAGATCCTTGTAGTCCAGGTGATCAGTGGTCAAAGACTC
CCCAAAGTGGACAAAACCAAAGAGACAACCGTTGTGGATCCACTGGTGAGAGTAGAGCTCTATG
GTGTTCCTGAAGACACAAAGCAGCAAGAGACCAGCTATGTGGAGAACAATGGTATTAATCCATA
CTGGGGGGAGACATTCTATTTCCAGATCCAGGTGCCTGAACTTGCTATGCTGCGTTTTGTGGTA
AAGGATTATAGCAGGACATCCCGAAATAACTTTATAGGCCAATACACCCTGCCTTGGACCTGCA
TGAAACATGGTGAGACAAACCTTAGACTCTTGGCCAATATCCCAACTGTGGCTCCCTTCCTGAT
CCAATTCTTCTGCCTGTTTCTAGGCTACCGACATGTATCCTTGCTCTCCAAAGACGGCACTAGC
CTCCATCCAGCCTCCATCTTTGTGTACACCTGCATGCAAGAAGACCTGGATATGGATGAGCCCT
GAGAAACACAGGGAGGGTCTTGAAGCAGAACAATCTACAGATGCACTCTTTTCCAACCTACAAC
TTCCTCAGCATCCAGAGCCAGCCAAAGGATCAGTGGCGGACCAAGGTTCCCAGGTGAAGGTTGA
GGAAGAATCCTGACCCAGAACTATGACTCTAGAGAACAGTGCACAGCCGAGTCCCCACTGGACT
GCTGCTCCTTAGCTGGTCTAAATAGAGCTTCTCTGTCCAA

hide sequence

RefSeq Acc Id:

XM_008767191 ⟹ XP_008765413

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,117,181 - 76,142,440 (+)	NCBI
Rnor_6.0	9	81,816,402 - 81,844,360 (+)	NCBI

Sequence:

show sequence

AGACTCGGATTGATTGCCCTTGCAAGGCAGGATGCAGAAACACAGGAGCAAGCTGATGGAAAGC
GACACCATGGAGAGCAGCCAGATGAAATGAGGGCAAAAACAGTGGTATTCCACACAGACTCCGA
CCAGAATGAAAAGCAGTGATTCACAGAGCACTGCAATAGACAGGCCTGGCTTTCACTTTGAGAA
CAATTGTGAGATCAGGGTCAGTGAGGGGTGCAGGTTGGGAGGCATCAAGATAAAAGGCAGCCAG
GCTCCTTCTCCCTGGAGATGTGTTGCTGTTAACCTCAATCCATTCCCTTAATCCTTTTCTGTCA
CTCCACCCCCACAACTCCTCCTGTTGACCAGTGCTCTGGGCCTTTAAGAGTTAGATAGGCTGGA
CCTAGGAAAGCGCTCACACCTCTCCCCACTCCACTCCTCTCTGGCTGTAACTCTGCCAGTTACA
GCCGGCAAACTGCAGCAGGGTAGAAGCAGTCAAGTGCAAAGGAGAAAAGGAGTCTTCTCATTCT
CAGTGGAGAGCATTGTGGAGCTCGGGAGACGACGCTCACAGACACAGGATTACTATCCTACCCA
CGGTGACTCTGGCACCAGCTGGTGGAGCAGTGGGGGATGGCATCTCAGATTCAAAAGCTACTGA
CCACTAATCAGGACCTGCTGCTGATGCAAAAAGGAACGATGATGCGCAAGGTGAGGACCAAAAG
CTGGAAGAAGCTAAGATACTTCAGACTTCAGGATGACGGCATGACGGTCTGGCATGGGCGGCAC
CTTGAAAGCATATCCAAGCCCACTTTTTCAATCTCTGATGTGGAGAGGATCCGTAAGGGCCAGG
ATTCTGAGCTGTTGCGCTATCTGGTGGAAGAGTTCCCCCTGGAGCAAGGCTTCACCATTGTCTT
TAATGGGCGCCGCCCCAACCTGGACCTAGTGGCCAACAGTGTTGAAGAGGCCCAGACTTGGATG
CGAGGACTCCAGCTGTTGGTGGATCTCGTCGCCAGAATGAACTACCAGGAGCAGCTGGATCAAA
TGTTGAGAGAATGGTTCCAACAAGCAGACAGAAACCAGGACAGCCGGATGAGTTTCAGAGAAGC
TCAACGGCTGCTGCTTCTGATGAATGTGGAAATGGATGAAGAATATGCCTTCAGTCTTTTTCAG
GAAGCAGATGTTTCCCAATCTAATACTCTGGATTCAGAAGAATTTGTACAGTTCTATAAGGCCC
TGACTAAGCGCACTGAGATTGAAGAACTATTTGAGAACTTTTCATCTGACAAACAGAAGCTGAC
CTTGCTGGAATTTGTAGATTTCCTTAGAGAGGAACAGAAAGAAAGCGACCATTCCTCTGACCTT
GCTCTGAAACTCATTGACCGCTATGAGCCTTCTGAGAATGGCAGATTGCTACGTGTGCTGAGCA
AGGATGGCTTCCTCAGCTACCTCTGCTCAGCGGATGGAAACATCTTCAACCCCGACTGCCTCCC
TATCTATCAGGATATGACTCAGCCTCTGAGTCACTACTACATCAACTCCTCTCACAACACCTAC
CTACTGGGTGACCAGTTTTGTGGCCAGAGCAGCGTTGAAGGATACATACGGGCCTTGAAACGGG
GGTGCCGCTGTGTGGAGGTGGATACGTGGGACGGACCTGACGGAGAGCCCGTTGTTTATCATGG
GCGTACACTGACCTCTCGTATCCTGTTCAAAGATGTTTTGGCAACATTAGCACAATATGCCTTC
CAGTCGTCAGACTACCCACTCATCTTATCTCTGGATAACCACTGCACTTGGGAACAGCAGAAGA
CCATGGCACACCATCTGATTGCGATCCTGGGAGAGCAGCTGCTGAGTACCACCCTAGAGGAACA
ACTGATTGATATAATGCCCTCGCCAGAGCTTCGGGGGAAGATCTTGGTAAAAGGAAAGAAGTTG
AGAACAATTGAGGTTGTTGAGTCTGACAAGGAGGAAGAAGAGCTGGAGAAAGATGAGGGGTCAG
ATCTGGACCCAGCCTCCGCTGAGCTTGACATGCAGTCTCAGCCCGAGTCCCAGGAGCAGGCCTC
TGGGAACAAGAGCAAGAACAAGAAGAAGTTTCTTCTCCAGAGTTCCACAACCATCCTATGCCCA
GACCTATCTGCCCTGGTTGTCTACTTGAGGACTGCTCCCTTCTGCAGCTTCACTCACTCCAAAG
AAAACTACCACATCTACGACATTTCATCCTTTTCTGAGTCCAAGGCCAAGAACCTCATCAGGGA
GGCAGGCAATGAGTTTGTACAGCACAATGCCAGACAGCTATGCCGTGTATACCCCAGTGGTCTG
AGGACAGATTCATCGAACTATAACCCCCAGGAACACTGGAATGTTGGCTGCCAAATGGTGGCCA
TGAACATGCAGACTGCAGGAAGTGCAATGGACATCTGTGATGGGCTCTTCCGCCAGAATGGGGG
CTCTGGCTATGTGCTGAAGCCAGAATTCCTGAGAGATACCCAGAGTTCCTTCAATCCCATGAAG
CCCGTTAGTCTTTATAAAGCCCAGATCCTTGTAGTCCAGGTGATCAGTGGTCAAAGACTCCCCA
AAGTGGACAAAACCAAAGAGACAACCGTTGTGGATCCACTGGTGAGAGTAGAGCTCTATGGTGT
TCCTGAAGACACAAAGCAGCAAGAGACCAGCTATGTGGAGAACAATGGTATTAATCCATACTGG
GGGGAGACATTCTATTTCCAGATCCAGGTGCCTGAACTTGCTATGCTGCGTTTTGTGGTAAAGG
ATTATAGCAGGACATCCCGAAATAACTTTATAGGCCAATACACCCTGCCTTGGACCTGCATGAA
ACATGGCTACCGACATGTATCCTTGCTCTCCAAAGACGGCACTAGCCTCCATCCAGCCTCCATC
TTTGTGTACACCTGCATGCAAGAAGACCTGGATATGGATGAGCCCTGAGAAACACAGGGAGGGT
CTTGAAGCAGAACAATCTACAGATGCACTCTTTTCCAACCTACAACTTCCTCAGCATCCAGAGC
CAGCCAAAGGATCAGTGGCGGACCAAGGTTCCCAGGTGAAGGTTGAGGAAGAATCCTGACCCAG
AACTATGACTCTAGAGAACAGTGCACAGCCGAGTCCCCACTGGACTGCTGCTCCTTAGCTGGTC
TAAATAGAGCTTCTCTGTCCAA

hide sequence

RefSeq Acc Id:

XM_039082973 ⟹ XP_038938901

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,115,524 - 76,142,449 (+)	NCBI

RefSeq Acc Id:

XM_039082974 ⟹ XP_038938902

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,119,458 - 76,142,449 (+)	NCBI

RefSeq Acc Id:

XM_039082975 ⟹ XP_038938903

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,115,524 - 76,158,602 (+)	NCBI

RefSeq Acc Id:

XM_039082976 ⟹ XP_038938904

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,115,524 - 76,142,449 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_542419	(Get FASTA)	NCBI Sequence Viewer
	XP_006245198	(Get FASTA)	NCBI Sequence Viewer
	XP_006245199	(Get FASTA)	NCBI Sequence Viewer
	XP_006245200	(Get FASTA)	NCBI Sequence Viewer
	XP_008765404	(Get FASTA)	NCBI Sequence Viewer
	XP_008765406	(Get FASTA)	NCBI Sequence Viewer
	XP_008765409	(Get FASTA)	NCBI Sequence Viewer
	XP_008765410	(Get FASTA)	NCBI Sequence Viewer
	XP_008765411	(Get FASTA)	NCBI Sequence Viewer
	XP_008765412	(Get FASTA)	NCBI Sequence Viewer
	XP_008765413	(Get FASTA)	NCBI Sequence Viewer
	XP_038938901	(Get FASTA)	NCBI Sequence Viewer
	XP_038938902	(Get FASTA)	NCBI Sequence Viewer
	XP_038938903	(Get FASTA)	NCBI Sequence Viewer
	XP_038938904	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC52346	(Get FASTA)	NCBI Sequence Viewer
	BAA09046	(Get FASTA)	NCBI Sequence Viewer
	CBF62919	(Get FASTA)	NCBI Sequence Viewer
	CBF74633	(Get FASTA)	NCBI Sequence Viewer
	CBU87795	(Get FASTA)	NCBI Sequence Viewer
	CBU96742	(Get FASTA)	NCBI Sequence Viewer
	EDL75358	(Get FASTA)	NCBI Sequence Viewer
	EDL75359	(Get FASTA)	NCBI Sequence Viewer
	Q62711	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_542419 ⟸ NM_080688

- UniProtKB:

Q63693 (UniProtKB/Swiss-Prot), Q62711 (UniProtKB/Swiss-Prot), A0A8L2QKX9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASQIQKLLTTNQDLLLMQKGTMMRKVRTKSWKKLRYFRLQDDGMTVWHGRHLESISKPTFSIS
DVERIRKGQDSELLRYLVEEFPLEQGFTIVFNGRRPNLDLVANSVEEAQTWMRGLQLLVDLVAR
MNYQEQLDQMLREWFQQADRNQDSRMSFREAQRLLLLMNVEMDEEYAFSLFQEADVSQSNTLDS
EEFVQFYKALTKRTEIEELFENFSSDKQKLTLLEFVDFLREEQKESDHSSDLALKLIDRYEPSE
NGRLLRVLSKDGFLSYLCSADGNIFNPDCLPIYQDMTQPLSHYYINSSHNTYLLGDQFCGQSSV
EGYIRALKRGCRCVEVDTWDGPDGEPVVYHGRTLTSRILFKDVLATLAQYAFQSSDYPLILSLD
NHCTWEQQKTMAHHLIAILGEQLLSTTLEEQLIDIMPSPEQLRGKILVKGKKLRTIEVVESDKE
EEELEKDEGSDLDPASAELDMQSQPESQEQASGNKSKNKKKFLLQSSTTILCPDLSALVVYLRT
APFCSFTHSKENYHIYDISSFSESKAKNLIREAGNEFVQHNARQLCRVYPSGLRTDSSNYNPQE
HWNVGCQMVAMNMQTAGSAMDICDGLFRQNGGSGYVLKPEFLRDTQSSFNPMKPVSLYKAQILV
VQVISGQRLPKVDKTKETTVVDPLVRVELYGVPEDTKQQETSYVENNGINPYWGETFYFQIQVP
ELAMLRFVVKDYSRTSRNNFIGQYTLPWTCMKHGYRHVSLLSKDGTSLHPASIFVYTCMQEDLD
MDEP

hide sequence

RefSeq Acc Id:	XP_006245198 ⟸ XM_006245136
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QKX9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASQIQKLLTTNQDLLLMQKGTMMRKVRTKSWKKLRYFRLQDDGMTVWHGRHLESISKPTFSIS DVERIRKGQDSELLRYLVEEFPLEQGFTIVFNGRRPNLDLVANSVEEAQTWMRGLQLLVDLVAR MNYQEQLDQMLREWFQQADRNQDSRMSFREAQRLLLLMNVEMDEEYAFSLFQEADVSQSNTLDS EEFVQFYKALTKRTEIEELFENFSSDKQKLTLLEFVDFLREEQKESDHSSDLALKLIDRYEPSE NGRLLRVLSKDGFLSYLCSADGNIFNPDCLPIYQDMTQPLSHYYINSSHNTYLLGDQFCGQSSV EGYIRALKRGCRCVEVDTWDGPDGEPVVYHGRTLTSRILFKDVLATLAQYAFQSSDYPLILSLD NHCTWEQQKTMAHHLIAILGEQLLSTTLEEQLIDIMPSPEQLRGKILVKGKKLRTIEVVESDKE EEELEKDEGSDLDPASAELDMQSQPESQEQASGNKSKNKKKVMKCPMSCLLICAHVLAQAPNSI PESILLPKKFLLQSSTTILCPDLSALVVYLRTAPFCSFTHSKENYHIYDISSFSESKAKNLIRE AGNEFVQHNARQLCRVYPSGLRTDSSNYNPQEHWNVGCQMVAMNMQTAGSAMDICDGLFRQNGG SGYVLKPEFLRDTQSSFNPMKPVSLYKAQILVVQVISGQRLPKVDKTKETTVVDPLVRVELYGV PEDTKQQETSYVENNGINPYWGETFYFQIQVPELAMLRFVVKDYSRTSRNNFIGQYTLPWTCMK HGETNLRLLANIPTVAPFLIQFFCLFLGYRHVSLLSKDGTSLHPASIFVYTCMQEDLDMDEP hide sequence

RefSeq Acc Id:	XP_006245199 ⟸ XM_006245137
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QKX9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASQIQKLLTTNQDLLLMQKGTMMRKVRTKSWKKLRYFRLQDDGMTVWHGRHLESISKPTFSIS DVERIRKGQDSELLRYLVEEFPLEQGFTIVFNGRRPNLDLVANSVEEAQTWMRGLQLLVDLVAR MNYQEQLDQMLREWFQQADRNQDSRMSFREAQRLLLLMNVEMDEEYAFSLFQEADVSQSNTLDS EEFVQFYKALTKRTEIEELFENFSSDKQKLTLLEFVDFLREEQKESDHSSDLALKLIDRYEPSE NGRLLRVLSKDGFLSYLCSADGNIFNPDCLPIYQDMTQPLSHYYINSSHNTYLLGDQFCGQSSV EGYIRALKRGCRCVEVDTWDGPDGEPVVYHGRTLTSRILFKDVLATLAQYAFQSSDYPLILSLD NHCTWEQQKTMAHHLIAILGEQLLSTTLEEQLIDIMPSPEQLRGKILVKGKKLRTIEVVESDKE EEELEKDEGSDLDPASAELDMQSQPESQEQASGNKSKNKKKVMKCPMSCLLICAHVLAQAPNSI PESILLPKKFLLQSSTTILCPDLSALVVYLRTAPFCSFTHSKENYHIYDISSFSESKAKNLIRE AGNEFVQHNARQLCRVYPSGLRTDSSNYNPQEHWNVGCQMVAMNMQTAGSAMDICDGLFRQNGG SGYVLKPEFLRDTQSSFNPMKPVSLYKAQILVVQVISGQRLPKVDKTKETTVVDPLVRVELYGV PEDTKQQETSYVENNGINPYWGETFYFQIQVPELAMLRFVVKDYSRTSRNNFIGQYTLPWTCMK HGETNLRLLANIPTVAPFLIQFFCLFLGYRHVSLLSKDGTSLHPASIFVYTCMQEDLDMDEP hide sequence

RefSeq Acc Id:	XP_006245200 ⟸ XM_006245138
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QKX9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASQIQKLLTTNQDLLLMQKGTMMRKVRTKSWKKLRYFRLQDDGMTVWHGRHLESISKPTFSIS DVERIRKGQDSELLRYLVEEFPLEQGFTIVFNGRRPNLDLVANSVEEAQTWMRGLQLLVDLVAR MNYQEQLDQMLREWFQQADRNQDSRMSFREAQRLLLLMNVEMDEEYAFSLFQEADVSQSNTLDS EEFVQFYKALTKRTEIEELFENFSSDKQKLTLLEFVDFLREEQKESDHSSDLALKLIDRYEPSE NGRLLRVLSKDGFLSYLCSADGNIFNPDCLPIYQDMTQPLSHYYINSSHNTYLLGDQFCGQSSV EGYIRALKRGCRCVEVDTWDGPDGEPVVYHGRTLTSRILFKDVLATLAQYAFQSSDYPLILSLD NHCTWEQQKTMAHHLIAILGEQLLSTTLEEQLIDIMPSPEQLRGKILVKGKKLRTIEVVESDKE EEELEKDEGSDLDPASAELDMQSQPESQEQASGNKSKNKKKVMKCPMSCLLICAHVLAQAPNSI PESILLPKKFLLQSSTTILCPDLSALVVYLRTAPFCSFTHSKENYHIYDISSFSESKAKNLIRE AGNEFVQHNARQLCRVYPSGLRTDSSNYNPQEHWNVGCQMVAMNMQTAGSAMDICDGLFRQNGG SGYVLKPEFLRDTQSSFNPMKPVSLYKAQILVVQVISGQRLPKVDKTKETTVVDPLVRVELYGV PEDTKQQETSYVENNGINPYWGETFYFQIQVPELAMLRFVVKDYSRTSRNNFIGQYTLPWTCMK HGETNLRLLANIPTVAPFLIQFFCLFLGYRHVSLLSKDGTSLHPASIFVYTCMQEDLDMDEP hide sequence

RefSeq Acc Id:	XP_008765409 ⟸ XM_008767187
- Peptide Label:	isoform X2
- UniProtKB:	A0A8L2QKX9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASQIQKLLTTNQDLLLMQKGTMMRKVRTKSWKKLRYFRLQDDGMTVWHGRHLESISKPTFSIS DVERIRKGQDSELLRYLVEEFPLEQGFTIVFNGRRPNLDLVANSVEEAQTWMRGLQLLVDLVAR MNYQEQLDQMLREWFQQADRNQDSRMSFREAQRLLLLMNVEMDEEYAFSLFQEADVSQSNTLDS EEFVQFYKALTKRTEIEELFENFSSDKQKLTLLEFVDFLREEQKESDHSSDLALKLIDRYEPSE NGRLLRVLSKDGFLSYLCSADGNIFNPDCLPIYQDMTQPLSHYYINSSHNTYLLGDQFCGQSSV EGYIRALKRGCRCVEVDTWDGPDGEPVVYHGRTLTSRILFKDVLATLAQYAFQSSDYPLILSLD NHCTWEQQKTMAHHLIAILGEQLLSTTLEEQLIDIMPSPELRGKILVKGKKLRTIEVVESDKEE EELEKDEGSDLDPASAELDMQSQPESQEQASGNKSKNKKKVMKCPMSCLLICAHVLAQAPNSIP ESILLPKKFLLQSSTTILCPDLSALVVYLRTAPFCSFTHSKENYHIYDISSFSESKAKNLIREA GNEFVQHNARQLCRVYPSGLRTDSSNYNPQEHWNVGCQMVAMNMQTAGSAMDICDGLFRQNGGS GYVLKPEFLRDTQSSFNPMKPVSLYKAQILVVQVISGQRLPKVDKTKETTVVDPLVRVELYGVP EDTKQQETSYVENNGINPYWGETFYFQIQVPELAMLRFVVKDYSRTSRNNFIGQYTLPWTCMKH GETNLRLLANIPTVAPFLIQFFCLFLGYRHVSLLSKDGTSLHPASIFVYTCMQEDLDMDEP hide sequence

RefSeq Acc Id:	XP_008765406 ⟸ XM_008767184
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QKX9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASQIQKLLTTNQDLLLMQKGTMMRKVRTKSWKKLRYFRLQDDGMTVWHGRHLESISKPTFSIS DVERIRKGQDSELLRYLVEEFPLEQGFTIVFNGRRPNLDLVANSVEEAQTWMRGLQLLVDLVAR MNYQEQLDQMLREWFQQADRNQDSRMSFREAQRLLLLMNVEMDEEYAFSLFQEADVSQSNTLDS EEFVQFYKALTKRTEIEELFENFSSDKQKLTLLEFVDFLREEQKESDHSSDLALKLIDRYEPSE NGRLLRVLSKDGFLSYLCSADGNIFNPDCLPIYQDMTQPLSHYYINSSHNTYLLGDQFCGQSSV EGYIRALKRGCRCVEVDTWDGPDGEPVVYHGRTLTSRILFKDVLATLAQYAFQSSDYPLILSLD NHCTWEQQKTMAHHLIAILGEQLLSTTLEEQLIDIMPSPEQLRGKILVKGKKLRTIEVVESDKE EEELEKDEGSDLDPASAELDMQSQPESQEQASGNKSKNKKKVMKCPMSCLLICAHVLAQAPNSI PESILLPKKFLLQSSTTILCPDLSALVVYLRTAPFCSFTHSKENYHIYDISSFSESKAKNLIRE AGNEFVQHNARQLCRVYPSGLRTDSSNYNPQEHWNVGCQMVAMNMQTAGSAMDICDGLFRQNGG SGYVLKPEFLRDTQSSFNPMKPVSLYKAQILVVQVISGQRLPKVDKTKETTVVDPLVRVELYGV PEDTKQQETSYVENNGINPYWGETFYFQIQVPELAMLRFVVKDYSRTSRNNFIGQYTLPWTCMK HGETNLRLLANIPTVAPFLIQFFCLFLGYRHVSLLSKDGTSLHPASIFVYTCMQEDLDMDEP hide sequence

RefSeq Acc Id:	XP_008765404 ⟸ XM_008767182
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QKX9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASQIQKLLTTNQDLLLMQKGTMMRKVRTKSWKKLRYFRLQDDGMTVWHGRHLESISKPTFSIS DVERIRKGQDSELLRYLVEEFPLEQGFTIVFNGRRPNLDLVANSVEEAQTWMRGLQLLVDLVAR MNYQEQLDQMLREWFQQADRNQDSRMSFREAQRLLLLMNVEMDEEYAFSLFQEADVSQSNTLDS EEFVQFYKALTKRTEIEELFENFSSDKQKLTLLEFVDFLREEQKESDHSSDLALKLIDRYEPSE NGRLLRVLSKDGFLSYLCSADGNIFNPDCLPIYQDMTQPLSHYYINSSHNTYLLGDQFCGQSSV EGYIRALKRGCRCVEVDTWDGPDGEPVVYHGRTLTSRILFKDVLATLAQYAFQSSDYPLILSLD NHCTWEQQKTMAHHLIAILGEQLLSTTLEEQLIDIMPSPEQLRGKILVKGKKLRTIEVVESDKE EEELEKDEGSDLDPASAELDMQSQPESQEQASGNKSKNKKKVMKCPMSCLLICAHVLAQAPNSI PESILLPKKFLLQSSTTILCPDLSALVVYLRTAPFCSFTHSKENYHIYDISSFSESKAKNLIRE AGNEFVQHNARQLCRVYPSGLRTDSSNYNPQEHWNVGCQMVAMNMQTAGSAMDICDGLFRQNGG SGYVLKPEFLRDTQSSFNPMKPVSLYKAQILVVQVISGQRLPKVDKTKETTVVDPLVRVELYGV PEDTKQQETSYVENNGINPYWGETFYFQIQVPELAMLRFVVKDYSRTSRNNFIGQYTLPWTCMK HGETNLRLLANIPTVAPFLIQFFCLFLGYRHVSLLSKDGTSLHPASIFVYTCMQEDLDMDEP hide sequence

RefSeq Acc Id:	XP_008765411 ⟸ XM_008767189
- Peptide Label:	isoform X4
- UniProtKB:	A0A8L2QKX9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASQIQKLLTTNQDLLLMQKGTMMRKVRTKSWKKLRYFRLQDDGMTVWHGRHLESISKPTFSIS DVERIRKGQDSELLRYLVEEFPLEQGFTIVFNGRRPNLDLVANSVEEAQTWMRGLQLLVDLVAR MNYQEQLDQMLREWFQQADRNQDSRMSFREAQRLLLLMNVEMDEEYAFSLFQEADVSQSNTLDS EEFVQFYKALTKRTEIEELFENFSSDKQKLTLLEFVDFLREEQKESDHSSDLALKLIDRYEPSE NGRLLRVLSKDGFLSYLCSADGNIFNPDCLPIYQDMTQPLSHYYINSSHNTYLLGDQFCGQSSV EGYIRALKRGCRCVEVDTWDGPDGEPVVYHGRTLTSRILFKDVLATLAQYAFQSSDYPLILSLD NHCTWEQQKTMAHHLIAILGEQLLSTTLEEQLIDIMPSPEQLRGKILVKGKKLRTIEVVESDKE EEELEKDEGSDLDPASAELDMQSQPESQEQASGNKSKNKKKVMKCPMSCLLICAHVLAQAPNSI PESILLPKKFLLQSSTTILCPDLSALVVYLRTAPFCSFTHSKENYHIYDISSFSESKAKNLIRE AGNEFVQHNARQLCRVYPSGLRTDSSNYNPQEHWNVGCQMVAMNMQTAGSAMDICDGLFRQNGG SGYVLKPEFLRDTQSSFNPMKPVSLYKAQILVVQVISGQRLPKVDKTKETTVVDPLVRVELYGV PEDTKQQETSYVENNGINPYWGETFYFQIQVPELAMLRFVVKDYSRTSRNNFIGQYTLPWTCMK HGYRHVSLLSKDGTSLHPASIFVYTCMQEDLDMDEP hide sequence

RefSeq Acc Id:	XP_008765410 ⟸ XM_008767188
- Peptide Label:	isoform X3
- UniProtKB:	A0A8L2QKX9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASQIQKLLTTNQDLLLMQKGTMMRKVRTKSWKKLRYFRLQDDGMTVWHGRHLESISKPTFSIS DVERIRKGQDSELLRYLVEEFPLEQGFTIVFNGRRPNLDLVANSVEEAQTWMRGLQLLVDLVAR MNYQEQLDQMLREWFQQADRNQDSRMSFREAQRLLLLMNVEMDEEYAFSLFQEADVSQSNTLDS EEFVQFYKALTKRTEIEELFENFSSDKQKLTLLEFVDFLREEQKESDHSSDLALKLIDRYEPSE NGRLLRVLSKDGFLSYLCSADGNIFNPDCLPIYQDMTQPLSHYYINSSHNTYLLGDQFCGQSSV EGYIRALKRGCRCVEVDTWDGPDGEPVVYHGRTLTSRILFKDVLATLAQYAFQSSDYPLILSLD NHCTWEQQKTMAHHLIAILGEQLLSTTLEEQLIDIMPSPEQLRGKILVKGKKLRTIEVVESDKE EEELEKDEGSDLDPASAELDMQSQPESQEQASGNKSKNKKKAPNSIPESILLPKKFLLQSSTTI LCPDLSALVVYLRTAPFCSFTHSKENYHIYDISSFSESKAKNLIREAGNEFVQHNARQLCRVYP SGLRTDSSNYNPQEHWNVGCQMVAMNMQTAGSAMDICDGLFRQNGGSGYVLKPEFLRDTQSSFN PMKPVSLYKAQILVVQVISGQRLPKVDKTKETTVVDPLVRVELYGVPEDTKQQETSYVENNGIN PYWGETFYFQIQVPELAMLRFVVKDYSRTSRNNFIGQYTLPWTCMKHGETNLRLLANIPTVAPF LIQFFCLFLGYRHVSLLSKDGTSLHPASIFVYTCMQEDLDMDEP hide sequence

RefSeq Acc Id:	XP_008765412 ⟸ XM_008767190
- Peptide Label:	isoform X5
- UniProtKB:	A0A8L2QKX9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASQIQKLLTTNQDLLLMQKGTMMRKVRTKSWKKLRYFRLQDDGMTVWHGRHLESISKPTFSIS DVERIRKGQDSELLRYLVEEFPLEQGFTIVFNGRRPNLDLVANSVEEAQTWMRGLQLLVDLVAR MNYQEQLDQMLREWFQQADRNQDSRMSFREAQRLLLLMNVEMDEEYAFSLFQEADVSQSNTLDS EEFVQFYKALTKRTEIEELFENFSSDKQKLTLLEFVDFLREEQKESDHSSDLALKLIDRYEPSE NGRLLRVLSKDGFLSYLCSADGNIFNPDCLPIYQDMTQPLSHYYINSSHNTYLLGDQFCGQSSV EGYIRALKRGCRCVEVDTWDGPDGEPVVYHGRTLTSRILFKDVLATLAQYAFQSSDYPLILSLD NHCTWEQQKTMAHHLIAILGEQLLSTTLEEQLIDIMPSPEQLRGKILVKGKKLRTIEVVESDKE EEELEKDEGSDLDPASAELDMQSQPESQEQASGNKSKNKKKFLLQSSTTILCPDLSALVVYLRT APFCSFTHSKENYHIYDISSFSESKAKNLIREAGNEFVQHNARQLCRVYPSGLRTDSSNYNPQE HWNVGCQMVAMNMQTAGSAMDICDGLFRQNGGSGYVLKPEFLRDTQSSFNPMKPVSLYKAQILV VQVISGQRLPKVDKTKETTVVDPLVRVELYGVPEDTKQQETSYVENNGINPYWGETFYFQIQVP ELAMLRFVVKDYSRTSRNNFIGQYTLPWTCMKHGETNLRLLANIPTVAPFLIQFFCLFLGYRHV SLLSKDGTSLHPASIFVYTCMQEDLDMDEP hide sequence

RefSeq Acc Id:	XP_008765413 ⟸ XM_008767191
- Peptide Label:	isoform X6
- UniProtKB:	A0A8L2QKX9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASQIQKLLTTNQDLLLMQKGTMMRKVRTKSWKKLRYFRLQDDGMTVWHGRHLESISKPTFSIS DVERIRKGQDSELLRYLVEEFPLEQGFTIVFNGRRPNLDLVANSVEEAQTWMRGLQLLVDLVAR MNYQEQLDQMLREWFQQADRNQDSRMSFREAQRLLLLMNVEMDEEYAFSLFQEADVSQSNTLDS EEFVQFYKALTKRTEIEELFENFSSDKQKLTLLEFVDFLREEQKESDHSSDLALKLIDRYEPSE NGRLLRVLSKDGFLSYLCSADGNIFNPDCLPIYQDMTQPLSHYYINSSHNTYLLGDQFCGQSSV EGYIRALKRGCRCVEVDTWDGPDGEPVVYHGRTLTSRILFKDVLATLAQYAFQSSDYPLILSLD NHCTWEQQKTMAHHLIAILGEQLLSTTLEEQLIDIMPSPELRGKILVKGKKLRTIEVVESDKEE EELEKDEGSDLDPASAELDMQSQPESQEQASGNKSKNKKKFLLQSSTTILCPDLSALVVYLRTA PFCSFTHSKENYHIYDISSFSESKAKNLIREAGNEFVQHNARQLCRVYPSGLRTDSSNYNPQEH WNVGCQMVAMNMQTAGSAMDICDGLFRQNGGSGYVLKPEFLRDTQSSFNPMKPVSLYKAQILVV QVISGQRLPKVDKTKETTVVDPLVRVELYGVPEDTKQQETSYVENNGINPYWGETFYFQIQVPE LAMLRFVVKDYSRTSRNNFIGQYTLPWTCMKHGYRHVSLLSKDGTSLHPASIFVYTCMQEDLDM DEP hide sequence

RefSeq Acc Id:

ENSRNOP00000039708 ⟸ ENSRNOT00000041407

RefSeq Acc Id:

ENSRNOP00000022234 ⟸ ENSRNOT00000022234

RefSeq Acc Id:	XP_038938903 ⟸ XM_039082975
- Peptide Label:	isoform X4
- UniProtKB:	A0A8L2QKX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038938901 ⟸ XM_039082973
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QKX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038938904 ⟸ XM_039082976
- Peptide Label:	isoform X7
- UniProtKB:	A0A8L2QKX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038938902 ⟸ XM_039082974
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QKX9 (UniProtKB/TrEMBL)

Protein Domains

C2 EF-hand PH PI-PLC X-box PI-PLC Y-box

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q62711-F1-model_v2	AlphaFold	Q62711	1-772	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621025	AgrOrtholog
BioCyc Gene	G2FUF-27125	BioCyc
Ensembl Genes	ENSRNOG00000016361	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000039708	ENTREZGENE
	ENSRNOP00000039708.3	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000041407	ENTREZGENE
	ENSRNOT00000041407.5	UniProtKB/TrEMBL
Gene3D-CATH	2.30.29.30	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	2.60.40.150	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.20.20.190	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	EF-hand	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	C2_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	C2_domain_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	EF-hand-dom_pair	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	EF_Hand_1_Ca_BS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	EF_hand_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PH_domain	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PI-PLC_fam	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PLC-like_Pdiesterase_TIM-brl	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PLC_EF-hand-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PLipase_C_PInositol-sp_X_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PLipase_C_Pinositol-sp_Y	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:140693	UniProtKB/Swiss-Prot
NCBI Gene	140693	ENTREZGENE
PANTHER	PTHR10336	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR10336:SF31	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	EF-hand_like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PF00168	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PF00169	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PI-PLC-X	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PI-PLC-Y	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Plcd4	PhenoGen
PRINTS	PHPHLIPASEC	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	EF_HAND_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	EF_HAND_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PH_DOMAIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PIPLC_X_DOMAIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PIPLC_Y_DOMAIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PS50004	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	EFh	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PLCXc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PLCYc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SM00233	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SM00239	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF47473	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF49562	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF51695	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8L2QKX9	ENTREZGENE, UniProtKB/TrEMBL
	A6JVV0_RAT	UniProtKB/TrEMBL
	A6JVV1_RAT	UniProtKB/TrEMBL
	PLCD4_RAT	UniProtKB/Swiss-Prot, ENTREZGENE
	Q63693	ENTREZGENE
UniProt Secondary	Q63693	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2004-09-10	Plcd4	phospholipase C, delta 4			Symbol and Name status set to approved	1299863	APPROVED
2002-08-07	Plcd4	phospholipase C, delta 4			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_expression	enriched in testis; present in brain, skeletal muscle, thyroid gland, stomach, thymus, aorta, and heart	633664
gene_protein	772 amino acids	633664
gene_regulation	activated by phosphorylation by autophosphorylated tyrosine kinases as a result of binding to these kinases via the SH2 domains	633664

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

Imported Annotations - KEGG (archival)