QTL: Bvd6 (Brain ventricular dilatation QTL 6) Rattus norvegicus Symbol: Bvd6 Name: Brain ventricular dilatation QTL 6 Trait: Head/brain development Subtrait: brain ventricular dilatation Method: brain ventricular dilatation, representing inherited hydrocephalus, in 2-22 day old animals was assessed in fixed brain slices; coronal brain slices at 1.0 mm thickness were assessed for width of striatum ventricles versus width of brain to score hydrocephalus severity LOD Score: 3.1 P Value: 1.0E-4 Variance: 4.5 Position Map Chr Position Strand Source RGSC Genome Assembly v5.0 11 72,432,813 - 89,414,405   RGD RGSC Genome Assembly v3.4 11 67,930,910 - 87,759,784   RGD Genome Assembly 3.1 11 67,988,499 - 87,800,381   RGD Cross Type: Not Available Strains Crossed: F344 HTX/Hcj  Model Launch Genome Browser (GBrowse) Annotation    (Toggle Detail/Summary View) Candidate Gene Status Sst is a candidate Gene for Bvd6 Disease Annotations Term Qualifier Evidence With Reference Notes Source Original Reference(s) Hydrocephalus   IAGP   68693   RGD   Phenotype Annotations Term Qualifier Evidence With Reference Notes Source Original Reference(s) hydroencephaly   IED   68693   RGD   Disease Annotations Hydrocephalus  (IAGP) Phenotype Annotations hydroencephaly  (IED) References - curated 1. Jones HC, etal., Mamm Genome 2001 Jan;12(1):22-6. 2. Jones HC, etal., Mamm Genome 2001 Jan;12(1):22-6. RGD Disease Portals Bvd6 has been annotated in the following RGD Disease Portals. Neurological Diseases Neurological Phenotypes Related QTLs Related QTL Description Reference Bvd3 sub_region RGD:68196 Region Genes in Region (RGSC Genome Assembly v3.4) The following Genes overlap with this region.    Full Report CSV TAB Printer Gviewer RGD ID Symbol Name Chr Start Stop Species 1310675 Ropn1 rhophilin associated tail protein 1 11 67915535 67944757 Rat 2324772 LOC100363117 hypothetical LOC100363117 11 67928676 67934751 Rat 621865 Kalrn kalirin, RhoGEF kinase 11 68124348 68611336 Rat 1586472 LOC688628 similar to G2/mitotic-specific cyclin-B1 11 68138597 68140189 Rat 1311908 Umps uridine monophosphate synthetase 11 68619835 68630244 Rat 2323853 LOC100359440 dynein light chain 1-like 11 68763784 68764047 Rat 708547 Muc13 mucin 13, cell surface associated 11 68772132 68794882 Rat 1564641 Heg1 heart development protein with EGF-like domains 1 11 68828748 68889177 Rat 1564641 Heg1 heart development protein with EGF-like domains 1 11 68828748 68912073 Rat 628730 Slc12a8 solute carrier family 12 (potassium/chloride transporters), member 8 11 68934104 69087168 Rat 1585284 LOC688723 similar to 60S ribosomal protein L7a 11 69023044 69023844 Rat 62063 Zfp148 zinc finger protein 148 11 69103680 69207360 Rat 1559590 RGD1559590 similar to glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (EC 1.2.1.12) 11 69272374 69278008 Rat 1309763 Snx4 sorting nexin 4 11 69283047 69340448 Rat 1307294 Osbpl11 oxysterol binding protein-like 11 11 69356220 69418534 Rat 1311465 Lmln leishmanolysin-like (metallopeptidase M8 family) 11 69481117 69547133 Rat 2323795 LOC100359498 ribosomal protein L35a-like 11 69548986 69552929 Rat 1311606 Iqcg IQ motif containing G 11 69553215 69591042 Rat 1306200 Lrch3 leucine-rich repeats and calponin homology (CH) domain containing 3 11 69619236 69692162 Rat 1306899 Fyttd1 forty-two-three domain containing 1 11 69700526 69720622 Rat 1305422 RGD1305422 similar to mKIAA0226 protein 11 69735303 69784725 Rat 1304865 Muc20 mucin 20, cell surface associated 11 69808275 69823526 Rat 621331 Muc4 mucin 4, cell surface associated 11 69830276 69858366 Rat 1305957 Tnk2 tyrosine kinase, non-receptor, 2 11 69927509 69966854 Rat 2323532 LOC100359708 hypothetical protein LOC100359708 11 69938068 69944578 Rat 70488 Tfrc transferrin receptor 11 69976258 69998098 Rat 1597039 LOC498093 similar to acidic ribosomal phosphoprotein P0 11 70006415 70008330 Rat 1309014 Zdhhc19 zinc finger, DHHC-type containing 19 11 70093702 70105297 Rat 1311100 Slc51a solute carrier family 51, alpha subunit 11 70115430 70129828 Rat 70515 Pcyt1a phosphate cytidylyltransferase 1, choline, alpha 11 70133325 70173686 Rat 1563597 Tctex1d2 Tctex1 domain containing 2 11 70175484 70183844 Rat 1560486 Tm4sf19 transmembrane 4 L six family member 19 11 70189725 70201499 Rat 1306346 Ubxn7 UBX domain protein 7 11 70244797 70278154 Rat 1585168 Rnf168 ring finger protein 168, E3 ubiquitin protein ligase 11 70304917 70328010 Rat 1562500 Smco1 single-pass membrane protein with coiled-coil domains 1 11 70328102 70334603 Rat 1559546 Wdr53 WD repeat domain 53 11 70362385 70370721 Rat 1311861 RGD1311861 similar to hypothetical protein MGC19444 11 70371195 70383880 Rat 1310771 Lrrc33 leucine rich repeat containing 33 11 70449116 70466412 Rat 621352 Cep19 centrosomal protein 19 11 70500062 70508772 Rat 1307289 Pigx phosphatidylinositol glycan anchor biosynthesis, class X 11 70508995 70524958 Rat 61953 Pak2 p21 protein (Cdc42/Rac)-activated kinase 2 11 70529961 70588511 Rat 1304604 Senp5 Sumo1/sentrin/SMT3 specific peptidase 5 11 70615144 70638219 Rat 1596188 Ncbp2 nuclear cap binding protein subunit 2 11 70642907 70651744 Rat 2323050 LOC100359995 rCG63619-like 11 70651904 70652651 Rat 1307107 Pigz phosphatidylinositol glycan anchor biosynthesis, class Z 11 70653993 70673626 Rat 1564688 RGD1564688 similar to glyceraldehyde-3-phosphate dehydrogenase 11 70679883 70680884 Rat 1308155 Mfi2 antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 11 70706384 70728239 Rat 2505 Dlg1 discs, large homolog 1 (Drosophila) 11 70735283 70930374 Rat 620131 Bdh1 3-hydroxybutyrate dehydrogenase, type 1 11 71130561 71165695 Rat 1560409 RGD1560409 similar to ribosomal protein L31 11 71234703 71246702 Rat 621099 Ppp1r2 protein phosphatase 1, regulatory (inhibitor) subunit 2 11 71319294 71342716 Rat 1596124 Scand3-ps4 SCAN domain containing 3, pseudogene 4 11 71328053 71328516 Rat 1562939 Acap2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 11 71411706 71524828 Rat 1308154 Xxylt1 xyloside xylosyltransferase 1 11 71532958 71660301 Rat 1582878 LOC690232 hypothetical protein LOC690232 11 71685640 71686392 Rat 1304790 Fam43a family with sequence similarity 43, member A 11 72010484 72012886 Rat 1309089 Lsg1 large subunit GTPase 1 homolog (S. cerevisiae) 11 72026815 72051401 Rat 1594810 LOC689242 similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) 11 72036944 72037467 Rat 1563737 Tmem44 transmembrane protein 44 11 72062805 72084750 Rat 1562415 RGD1562415 similar to 40S ribosomal protein S26 11 72257016 72257432 Rat 1590881 Atp13a3 ATPase type 13A3 11 72263084 72290643 Rat 2724 Gp5 glycoprotein V (platelet) 11 72341773 72344865 Rat 70551 Lrrc15 leucine rich repeat containing 15 11 72377090 72378826 Rat 1305170 Cpn2 carboxypeptidase N, polypeptide 2 11 72384307 72397118 Rat 2325122 LOC100359603 hypothetical LOC100359603 11 72418411 72423183 Rat 1565541 RGD1565541 similar to transcription elongation factor B (SIII), polypeptide 2 11 72502386 72548982 Rat 2323531 LOC100359709 mCG52010-like 11 72548991 72601140 Rat 62081 Hes1 hairy and enhancer of split 1 (Drosophila) 11 72603482 72605673 Rat 708423 Opa1 optic atrophy 1 11 73005470 73058136 Rat 2322532 LOC100360218 interleukin 13 receptor, alpha 1-like 11 73147318 73148958 Rat 2323273 LOC100359870 hypothetical LOC100359870 11 73157694 73160831 Rat 1306927 Atp13a4 ATPase type 13A4 11 73163802 73251192 Rat 1306792 Atp13a5 ATPase type 13A5 11 73267689 73418786 Rat 1309485 Hrasls HRAS-like suppressor 11 73420971 73439334 Rat 1589780 LOC288024 similar to glyceraldehyde-3-phosphate dehydrogenase 11 73603487 73604484 Rat 1596034 LOC690476 similar to ubiquitin carboxyl-terminal hydrolase CYLD 11 73609555 73616961 Rat 1559643 Mb21d2 Mab-21 domain containing 2 11 73733241 73831764 Rat 2322941 LOC100360004 ribosomal protein L26-like 11 73873798 73874218 Rat 620163 Fgf12 fibroblast growth factor 12 11 74208696 74481037 Rat 727841 Ccdc50 coiled-coil domain containing 50 11 75302647 75360549 Rat 727977 Uts2b urotensin 2B 11 75389855 75424944 Rat 1303110 Ostn osteocrin 11 75432572 75455380 Rat 1589781 LOC288019 similar to eukaryotic translation elongation factor 1 alpha 1 11 75632336 75633726 Rat 1563170 Gmnc geminin coiled-coil domain containing 11 75823385 75835294 Rat 2893 Il1rap interleukin 1 receptor accessory protein 11 76092252 76222576 Rat 2322856 Tmem207 transmembrane protein 207 11 76274664 76293867 Rat 620322 Cldn16 claudin 16 11 76313985 76334074 Rat 1594670 LOC690594 similar to poly(A) binding protein, cytoplasmic 4 isoform 2 11 76450299 76451942 Rat 68422 Cldn1 claudin 1 11 76473654 76488809 Rat 1561729 RGD1561729 similar to ribosomal protein L10 11 76490269 76527873 Rat 2322514 LOC100360236 hypothetical LOC100360236 11 76621145 76622108 Rat 1304568 Leprel1 leprecan-like 1 11 76687437 76828785 Rat 620863 Tp63 tumor protein p63 11 76900622 77200251 Rat 2322462 LOC100360289 hypothetical LOC100360289 11 77211173 77370144 Rat 1590724 LOC679233 similar to heterogeneous nuclear ribonucleoprotein H2 11 77437075 77461767 Rat 1306226 Tprg1 tumor protein p63 regulated 1 11 77477085 77601486 Rat 1561572 RGD1561572 similar to splicing factor 3a, subunit 2 11 77932097 77932984 Rat 1310535 Lpp LIM domain containing preferred translocation partner in lipoma 11 77963582 78416872 Rat 1593403 LOC690668 similar to A-kinase anchor protein 5 (A-kinase anchor protein 150 kDa) (AKAP 150) (cAMP-dependent protein kinase regulatory subunit II high affinity binding protein) (P150) 11 78480803 78481645 Rat 1563535 RGD1563535 similar to Myosin light polypeptide 6 (Myosin light chain alkali 3) 11 78564554 78564924 Rat 1309345 Bcl6 B-cell CLL/lymphoma 6 11 79006123 79030555 Rat 1565722 Rtp2 receptor (chemosensory) transporter protein 2 11 79092578 79098266 Rat 3761 Sst somatostatin 11 79125031 79126216 Rat 1564585 RGD1564585 similar to golli-interacting protein 11 79315177 79322955 Rat 1590995 LOC690837 hypothetical protein LOC690837 11 79371635 79377466 Rat 1306974 Rtp4 receptor (chemosensory) transporter protein 4 11 79433553 79445410 Rat 620213 Masp1 mannan-binding lectin serine peptidase 1 11 79532504 79602755 Rat 1560980 Rtp1 receptor (chemosensory) transporter protein 1 11 79620059 79622575 Rat 1589782 LOC288005 similar to 60S ribosomal protein L21 11 79674797 79675257 Rat 1584956 LOC363813 similar to Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) (Liver copper-binding protein) (CUBP) 11 79676913 79681120 Rat 2319156 LOC100361924 microtubule associated serine/threonine kinase 2-like 11 79690063 79698874 Rat 3676 St6gal1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 11 79723269 79765645 Rat 628748 Adipoq adiponectin, C1Q and collagen domain containing 11 79908291 79911065 Rat 2319108 LOC100361972 mCG131663-like 11 79914524 79915356 Rat 1310142 Rfc4 replication factor C (activator 1) 4 11 79935273 79950589 Rat 1309225 Eif4a2 eukaryotic translation initiation factor 4A2 11 79950592 79957185 Rat 1583711 LOC501783 similar to cyclin B1 interacting protein 1 11 79999571 80000444 Rat 1359376 Kng1l1 kininogen 1-like 1 11 80008752 80031601 Rat 1589871 LOC690907 similar to protein kinase, AMP-activated, alpha 1 catalytic subunit 11 80078504 80080720 Rat 1584955 LOC363815 hypothetical LOC363815 11 80082649 80093146 Rat 2980 Kng1 kininogen 1 11 80109499 80131887 Rat 1589859 LOC690920 similar to cyclin B1 interacting protein 1 11 80139721 80140593 Rat 2318575 LOC100362210 histidine-rich glycoprotein-like 11 80230659 80243428 Rat 619808 Hrg histidine-rich glycoprotein 11 80248578 80264179 Rat 69293 Fetub fetuin B 11 80276852 80285039 Rat 1583710 LOC501785 similar to ribosomal protein L31 11 80307546 80320398 Rat 2075 Ahsg alpha-2-HS-glycoprotein 11 80330615 80336658 Rat 1307373 Dnajb11 DnaJ (Hsp40) homolog, subfamily B, member 11 11 80360406 80376870 Rat 1309604 Tbccd1 TBCC domain containing 1 11 80387000 80415192 Rat 1587483 Crygs crystallin, gamma S 11 80417632 80437802 Rat 2318335 LOC100362351 hCG2040565-like 11 80554126 80554583 Rat 1589813 LOC690970 hypothetical protein LOC690970 11 80612334 80612886 Rat 2499 Dgkg diacylglycerol kinase, gamma 11 80623184 80814779 Rat 1309590 Etv5 ets variant 5 11 80846286 80904013 Rat 1589789 LOC690996 hypothetical protein LOC690996 11 80846464 80846913 Rat 1588683 LOC691006 similar to proteaseome (prosome, macropain) 28 subunit, 3 11 81011299 81012192 Rat 1559972 RGD1559972 similar to ribosomal protein L27a 11 81018885 81019364 Rat 619886 Tra2b transformer 2 beta homolog (Drosophila) 11 81026729 81044936 Rat 2321746 LOC100360611 ribosomal protein L21-like 11 81063505 81063987 Rat 1305614 Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 11 81115320 81216170 Rat 708378 Senp2 Sumo1/sentrin/SMT3 specific peptidase 2 11 81225720 81259934 Rat 1561227 Map3k13 mitogen-activated protein kinase kinase kinase 13 11 81327515 81467415 Rat 1559917 RGD1559917 similar to SMT3 suppressor of mif two 3 homolog 2 11 81379789 81380115 Rat 621441 Ehhadh enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase 11 81474161 81507645 Rat 1562339 RGD1562339 RGD1562339 11 81578580 81625179 Rat 1309443 Vps8 vacuolar protein sorting 8 homolog (S. cerevisiae) 11 81635546 81866781 Rat 2321725 LOC100360632 bis(5-nucleosyl)-tetraphosphatase-like 11 81983638 81984059 Rat 1305602 Ephb3 Eph receptor B3 11 82027632 82046332 Rat 1585959 LOC679630 similar to eukaryotic translation initiation factor 4, gamma 1 isoform a 11 82077924 82150903 Rat 2320891 LOC100361069 hypothetical protein LOC100361069 11 82159412 82159573 Rat 1560559 RGD1560559 similar to RIKEN cDNA 2310042E22 11 82188243 82189394 Rat 1585930 LOC679659 similar to TIP41, TOR signalling pathway regulator-like 11 82335308 82341664 Rat 1563956 RGD1563956 similar to 60S ribosomal protein L12 11 82399041 82399514 Rat 620181 Chrd chordin 11 82401701 82410401 Rat 621438 Thpo thrombopoietin 11 82412552 82417807 Rat 1561203 Polr2h polymerase (RNA) II (DNA directed) polypeptide H 11 82421657 82426105 Rat 2361 Clcn2 chloride channel, voltage-sensitive 2 11 82427792 82441293 Rat 2322069 Fam131a family with sequence similarity 131, member A 11 82441211 82449496 Rat 1306144 Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 11 82451555 82471735 Rat 1305752 Psmd2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 11 82478177 82488804 Rat 1303039 Ece2 endothelin-converting enzyme 2 11 82492975 82507876 Rat 1306004 Alg3 ALG3, alpha-1,3- mannosyltransferase 11 82507540 82535341 Rat 708411 Camk2n2 calcium/calmodulin-dependent protein kinase II inhibitor 2 11 82519331 82519584 Rat 1564491 Vwa5b2 von Willebrand factor A domain containing 5B2 11 82535711 82552800 Rat 1310468 Abcf3 ATP-binding cassette, subfamily F (GCN20), member 3 11 82570495 82582228 Rat 620135 Ap2m1 adaptor-related protein complex 2, mu 1 subunit 11 82585474 82591832 Rat 1308834 Dvl3 dishevelled segment polarity protein 3 11 82597654 82622175 Rat 708380 Eif2b5 eukaryotic translation initiation factor 2B, subunit 5 epsilon 11 82634006 82643992 Rat 2318744 Rps15al2 ribosomal protein S15A-like 2 11 82648253 82648645 Rat 1587359 LOC303810 similar to ribosomal protein L15 11 82674017 82674627 Rat 1598124 LOC679946 similar to 40S ribosomal protein S7 (S8) 11 82677586 82678200 Rat 70913 Abcc5 ATP-binding cassette, subfamily C (CFTR/MRP), member 5 11 82714334 82809354 Rat 1306191 Parl presenilin associated, rhomboid-like 11 82836666 82864977 Rat 1596882 LOC680005 similar to 60S ribosomal protein L7a 11 82935443 82936233 Rat 1560102 Map6d1 MAP6 domain containing 1 11 82981697 82987926 Rat 1566176 Yeats2 YEATS domain containing 2 11 82990683 83064723 Rat 727971 Klhl24 kelch-like family member 24 11 83094560 83126617 Rat 1564731 RGD1564731 similar to 60S ribosomal protein L7a 11 83139356 83181612 Rat 1307521 Klhl6 kelch-like family member 6 11 83221776 83260528 Rat 70955 B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 11 83396028 83408584 Rat 1307928 Lamp3 lysosomal-associated membrane protein 3 11 83449326 83476622 Rat 1333751 Olr1565 olfactory receptor 1565 11 83502786 83503730 Rat 1584953 LOC363825 similar to heat shock protein 8 11 83512883 83514811 Rat 1333622 Olr1566 olfactory receptor 1566 11 83540231 83541172 Rat 1333712 Olr1567 olfactory receptor 1567 11 83618459 83619397 Rat 1334380 Olr1568 olfactory receptor 1568 11 83643287 83644225 Rat 1333362 Olr1569 olfactory receptor 1569 11 83668694 83669632 Rat 1333258 Olr1570 olfactory receptor 1570 11 83757848 83758789 Rat 1562349 LOC363827 similar to productively rearranged V-lambda-2 11 83827089 83827629 Rat 1642428 Igl immunoglobulin lambda chain complex 11 83926849 83975916 Rat 6484455 LOC680311 Ig lambda chain V-VI region SUT-like 11 83989857 84003428 Rat 6484481 LOC680329 immunoglobulin lambda-like polypeptide 5-like 11 84005556 84194944 Rat 2319568 LOC100361706 lambda-chain C1-region-like 11 84198234 84199868 Rat 2318135 LOC100362453 serine/threonine-protein phosphatase 2A catalytic subunit alpha-like 11 84270087 84271016 Rat 1592942 LOC680387 similar to CG13990-PA 11 84296854 84303746 Rat 621763 Sept5 septin 5 11 84365193 84370972 Rat 621050 Gp1bb glycoprotein Ib (platelet), beta polypeptide 11 84369795 84370972 Rat 1592932 LOC680397 similar to 60S ribosomal protein L9 11 84391849 84392426 Rat 1307734 Tbx1 T-box 1 11 84400980 84410631 Rat 1594165 Gnb1l guanine nucleotide binding protein (G protein), beta polypeptide 1-like 11 84427112 84489259 Rat 61960 Txnrd2 thioredoxin reductase 2 11 84513361 84561673 Rat 2379 Comt catechol-O-methyltransferase 11 84561591 84581713 Rat 1306655 Arvcf armadillo repeat gene deleted in velo-cardio-facial syndrome 11 84582208 84639874 Rat 1310348 Tango2 transport and golgi organization 2 homolog (Drosophila) 11 84643644 84686639 Rat 1306365 Dgcr8 DiGeorge syndrome critical region gene 8 11 84698795 84731041 Rat 1310418 Trmt2a tRNA methyltransferase 2 homolog A (S. cerevisiae) 11 84731490 84736099 Rat 1310521 Ranbp1 RAN binding protein 1 11 84736402 84744635 Rat 1308875 Zdhhc8 zinc finger, DHHC-type containing 8 11 84748939 84762305 Rat 620810 Rtn4r reticulon 4 receptor 11 84839082 84863508 Rat 2319374 LOC100361800 hypothetical protein LOC100361800 11 84840163 84863749 Rat 1590589 LOC680571 hypothetical protein LOC680571 11 84863755 84864141 Rat 1590932 Prodh proline dehydrogenase (oxidase) 1 11 84905060 84922229 Rat 1309390 Dgcr6 DiGeorge syndrome critical region gene 6 11 84922649 84927694 Rat 1564601 Vpreb2 pre-B lymphocyte gene 2 11 84997534 84998244 Rat 3703 Slc25a1 solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 11 85043902 85046919 Rat 1305333 Gsc2 goosecoid homeobox 2 11 85060271 85062259 Rat 1308218 Dgcr14 DiGeorge syndrome critical region gene 14 11 85064074 85072979 Rat 1304951 Tssk2 testis-specific serine kinase 2 11 85074711 85076066 Rat 1307352 Tssk1b testis-specific serine kinase 1B 11 85079063 85080486 Rat 1310567 Dgcr2 DiGeorge syndrome critical region gene 2 11 85082094 85130476 Rat 1306018 Car15 carbonic anhydrase 15 11 85135231 85138426 Rat 2319327 LOC100361850 zinc finger protein 74 (Cos52)-like 11 85153579 85156974 Rat 1306013 Scarf2 scavenger receptor class F, member 2 11 85164352 85175734 Rat 1306288 Klhl22 kelch-like family member 22 11 85179262 85220103 Rat 1590929 LOC287947 similar to ribosomal protein L31 11 85238652 85244585 Rat 1307560 Med15 mediator complex subunit 15 11 85270503 85344999 Rat 1588214 Ccdc74a coiled-coil domain containing 74A 11 85345536 85349923 Rat 1310674 Smpd4 sphingomyelin phosphodiesterase 4, neutral membrane 11 85352180 85375918 Rat 2321873 LOC100360584 roadblock domain-containing protein 3 11 85397257 85397628 Rat 1305905 Slc7a4 solute carrier family 7 (orphan transporter), member 4 11 85426546 85430217 Rat 3243 P2rx6 purinergic receptor P2X, ligand-gated ion channel, 6 11 85431257 85441293 Rat 2319134 LOC100361946 nucleotide-binding oligomerization domain containing 2-like 11 85441996 85458851 Rat 1308061 Thap7 THAP domain containing 7 11 85474475 85477516 Rat 1309100 Lztr1 leucine-zipper-like transcription regulator 1 11 85479494 85495053 Rat 1306028 Aifm3 apoptosis-inducing factor, mitochondrion-associated 3 11 85496302 85512831 Rat 1308531 Crkl v-crk sarcoma virus CT10 oncogene homolog (avian)-like 11 85520244 85554667 Rat 620225 Snap29 synaptosomal-associated protein 29 11 85579141 85609842 Rat 621213 Pi4ka phosphatidylinositol 4-kinase, catalytic, alpha 11 85610281 85726603 Rat 619854 Serpind1 serpin peptidase inhibitor, clade D (heparin cofactor), member 1 11 85666714 85677716 Rat 1587016 Tmem191c transmembrane protein 191C 11 85728708 85730899 Rat 1305338 Hic2 hypermethylated in cancer 2 11 85740737 85770511 Rat 1587000 LOC680884 hypothetical protein LOC680884 11 85770019 85770546 Rat 2321529 LOC100360729 ribosomal protein L37-like 11 85779558 85779849 Rat 1563657 Rimbp3 RIMS binding protein 3 11 85786898 85792478 Rat 1308361 Ube2l3 ubiquitin-conjugating enzyme E2L 3 11 85801097 85843043 Rat 1359227 Ydjc YdjC homolog (bacterial) 11 85845500 85848083 Rat 1310080 Ccdc116 coiled-coil domain containing 116 11 85849737 85852819 Rat 1585844 Sdf2l1 stromal cell-derived factor 2-like 1 11 85878093 85880335 Rat 1308065 RGD1308065 hypothetical LOC287935 11 85887782 85901307 Rat 1309484 Ppil2 peptidylprolyl isomerase (cyclophilin)-like 2 11 85903199 85925790 Rat 2321291 Ypel1 yippee-like 1 (Drosophila) 11 85929479 85936364 Rat 70500 Mapk1 mitogen activated protein kinase 1 11 85968732 86030387 Rat 631363 Ppm1f protein phosphatase, Mg2+/Mn2+ dependent, 1F 11 86086968 86114278 Rat 1309468 Top3b topoisomerase (DNA) III beta 11 86116936 86145314 Rat 1588558 Vpreb1 pre-B lymphocyte 1 11 86146891 86147768 Rat 2319088 LOC100361992 cellular nucleic acid binding protein 11 86149095 86149705 Rat 2321140 Igll1 immunoglobulin lambda-like polypeptide 1 11 86159013 86162005 Rat 1310892 Spag6 sperm associated antigen 6 11 86208991 86321358 Rat 1584684 LOC681060 hypothetical protein LOC681060 11 86348275 86349756 Rat 1333684 Olr1571 olfactory receptor 1571 11 86358258 86378142 Rat 2318887 LOC100362095 mCG9114-like 11 86511885 86517734 Rat 1306533 Pkp2 plakophilin 2 11 86553493 86584425 Rat 1583548 LOC681143 similar to glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)-like 11 86587279 86596614 Rat 1311696 Yars2 tyrosyl-tRNA synthetase 2 (mitochondrial) 11 86609037 86614799 Rat 620416 Dnm1l dynamin 1-like 11 86617236 86665861 Rat 1583523 LOC681168 similar to glyceraldehyde-3-phosphate dehydrogenase 11 86673355 86679152 Rat 708357 Fgd4 FYVE, RhoGEF and PH domain containing 4 11 86700118 86767928 Rat 1566036 RGD1566036 similar to RIKEN cDNA 2310008H04 11 86830121 86918203 Rat 1308126 Mzt2b mitotic spindle organizing protein 2B 11 86934910 86940800 Rat 1308982 Prkdc protein kinase, DNA activated, catalytic polypeptide 11 86951420 87169229 Rat 3060 Mcm4 minichromosome maintenance complex component 4 11 87169742 87183443 Rat 727838 Ube2v2 ubiquitin-conjugating enzyme E2 variant 2 11 87215842 87249726 Rat 1598025 LOC681247 hypothetical protein LOC681247 11 87311704 87314515 Rat 1560337 RGD1560337 similar to glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A 11 87372176 87373277 Rat Markers in Region (RGSC Genome Assembly v3.4) The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer RGD ID Symbol Expected Size Chr Start Stop Species Match 10375 D11Mgh1 148 11 84560093 84560241 Rat region 10375 D11Mgh1 148 11 84560092 84560241 Rat region 10376 D11Wox6 173 11 84560085 84560257 Rat region 10377 D11Mgh8 149 11 84571239 84571952 Rat region 11044 D11Wox5 246 11 85431891 85432136 Rat region 34725 D11Mgh3 168 11 68234782 68234949 Rat region 34725 D11Mgh3 168 11 68234781 68234949 Rat region 11291 D11Mgh7 161 11 79766611 79766772 Rat region 11291 D11Mgh7 161 11 79766610 79766772 Rat region 11292 D11Got72 144 11 79766668 79766811 Rat region 11292 D11Got72 144 11 79766667 79766811 Rat region 11343 D11Wox2 156 11 79124282 79124425 Rat region 11343 D11Wox2 156 11 79124281 79124425 Rat region 11344 D11Arb1 223 11 79125030 79126216 Rat region 11344 D11Arb1 223 11 79124281 79124503 Rat region 11345 D11Mit7 205 11 79124230 79124421 Rat region 37512 D11Rat50 236 11 84840964 84841212 Rat region 37512 D11Rat50 236 11 84840963 84841212 Rat region 37096 D11Rat92 149 11 76129817 76129943 Rat region 37096 D11Rat92 149 11 76129617 76129984 Rat region 37920 D4Rat178 115 11 78599714 78599788 Rat region 37942 D11Rat46 178 11 81091342 81091531 Rat region 37942 D11Rat46 178 11 81091341 81091531 Rat region 34912 D11Rat30 167 11 76551297 76551465 Rat region 34912 D11Rat30 167 11 76551292 76551707 Rat region 35094 D11Rat2 145 11 69348209 69348353 Rat region 35094 D11Rat2 145 11 69348208 69348353 Rat region 35859 D11Rat1 166 11 84443165 84443333 Rat region 35859 D11Rat1 166 11 84443164 84443333 Rat region 35953 D11Rat37 164 11 74026445 74026604 Rat region 35953 D11Rat37 164 11 74026444 74026604 Rat region 38284 D11Rat47 211 11 72531456 72531666 Rat region 38284 D11Rat47 211 11 72531455 72531666 Rat region 38382 D11Rat45 224 11 83440020 83440235 Rat region 38382 D11Rat45 224 11 83439910 83440240 Rat region 40380 D11Rat62 173 11 69538033 69538204 Rat region 40380 D11Rat62 173 11 69538032 69538204 Rat region 40550 D11Rat60 171 11 73521141 73521302 Rat region 40550 D11Rat60 171 11 73521140 73521303 Rat region 40678 D11Rat59 213 11 73199996 73200206 Rat region 40678 D11Rat59 213 11 73199985 73200379 Rat region 38672 D11Rat51 239 11 72145119 72145348 Rat region 38672 D11Rat51 239 11 72145118 72145347 Rat region 39978 D11Rat81 201 11 87144416 87144612 Rat region 40048 D11Rat58 164 11 79031979 79032154 Rat region 40048 D11Rat58 164 11 79031978 79032154 Rat region 40082 D11Rat82 173 11 80712465 80712637 Rat region 40082 D11Rat82 173 11 80712464 80712637 Rat region 38800 D11Rat43 234 11 85039893 85040103 Rat region 38800 D11Rat43 234 11 85039892 85040103 Rat region 38906 D11Rat33 200 11 80159574 80159763 Rat region 38906 D11Rat33 200 11 80159573 80159763 Rat region 38906 D11Rat33 200 11 79961389 79961588 Rat region 38906 D11Rat33 200 11 79961388 79961588 Rat region 38964 D11Rat42 102 11 79034375 79034468 Rat region 38964 D11Rat42 102 11 79034374 79034468 Rat region 39084 D11Rat93 240 11 67930911 67931151 Rat region 39084 D11Rat93 240 11 67930910 67931151 Rat region 41952 D11Arb2 199 11 79669327 79669525 Rat region 41952 D11Arb2 199 11 79669326 79669525 Rat region 41954 D11Arb4 236 11 68234775 68235010 Rat region 41954 D11Arb4 236 11 68234774 68235010 Rat region 41436 D11Rat53 495 11 86943555 86944066 Rat region 41436 D11Rat53 495 11 86943499 86944076 Rat region 41482 D11Rat57 170 11 76227255 76227426 Rat region 41482 D11Rat57 170 11 76227253 76227426 Rat region 42954 D11Rat115 173 11 70431779 70431951 Rat region 42954 D11Rat115 173 11 70431778 70431951 Rat region 42955 D11Rat106 132 11 70156500 70156631 Rat region 42955 D11Rat106 132 11 70156499 70156631 Rat region 42956 D11Rat105 205 11 73007964 73008171 Rat region 42956 D11Rat105 205 11 73007964 73008171 Rat region 42957 D11Rat104 237 11 76314948 76315299 Rat region 42958 D11Rat103 225 11 81604588 81604796 Rat region 42958 D11Rat103 225 11 81604587 81604796 Rat region 42376 D11Rat117 11 78599714 78599788 Rat region 42376 D11Rat117 11 78599713 78599788 Rat region 40870 D11Rat55 231 11 81703067 81703293 Rat region 40870 D11Rat55 231 11 81703066 81703293 Rat region 40938 D11Rat56 195 11 77880884 77881082 Rat region 40938 D11Rat56 195 11 77880883 77881082 Rat region 41756 D11Rat91 234 11 83221197 83221465 Rat region 41756 D11Rat91 234 11 83221196 83221465 Rat region 60568 D7Got152 172 11 69687004 69687175 Rat region 60568 D7Got152 172 11 69687003 69687175 Rat region 44846 D11Got77 244 11 87516887 87517128 Rat region 44846 D11Got77 244 11 87516886 87517128 Rat region 44847 D11Got73 300 11 81091353 81091652 Rat region 44847 D11Got73 300 11 81091352 81091652 Rat region 44849 D11Got78 198 11 80968923 80969119 Rat region 44849 D11Got78 198 11 80968922 80969119 Rat region 44851 D11Wox7 266 11 76083943 76084216 Rat region 44851 D11Wox7 266 11 76083942 76084216 Rat region 44852 D11Got70 247 11 78993124 78993367 Rat region 44852 D11Got70 247 11 78993123 78993367 Rat region 44855 D11Got66 169 11 76500756 76500923 Rat region 44855 D11Got66 169 11 76500755 76500923 Rat region 44857 D11Got62 162 11 74020986 74021147 Rat region 44857 D11Got62 162 11 74020985 74021147 Rat region 44858 D11Got63 206 11 73621630 73621835 Rat region 44858 D11Got63 206 11 73621629 73621835 Rat region 44861 D11Got60 152 11 69659045 69659195 Rat region 44862 D11Got53 112 11 68227013 68227121 Rat region 44862 D11Got53 112 11 68227012 68227121 Rat region 44864 D11Got54 166 11 68925503 68925665 Rat region 44864 D11Got54 166 11 68925502 68925665 Rat region 44876 D11Got58 203 11 69687022 69687224 Rat region 44876 D11Got58 203 11 69687021 69687224 Rat region 629586 D11Mit11 221 11 69329375 69329595 Rat region 629586 D11Mit11 221 11 69329374 69329595 Rat region 59998 D11Got61 149 11 73989719 73989863 Rat region 59998 D11Got61 149 11 73989718 73989863 Rat region 59999 D11Got65 117 11 76766886 76767002 Rat region 59999 D11Got65 117 11 76766885 76767002 Rat region 60000 D11Got67 118 11 76548976 76549093 Rat region 60000 D11Got67 118 11 76548975 76549093 Rat region 60001 D11Got69 88 11 78081532 78081621 Rat region 60001 D11Got69 88 11 78081531 78081621 Rat region 60002 D11Got71 170 11 78993171 78993340 Rat region 60002 D11Got71 170 11 78993170 78993340 Rat region 60003 D11Got74 359 11 80624462 80624816 Rat region 60003 D11Got74 359 11 80624461 80624816 Rat region 60004 D11Got75 210 11 80491145 80491354 Rat region 60004 D11Got75 210 11 80491144 80491354 Rat region 60005 D11Got79 94 11 82238711 82238801 Rat region 60005 D11Got79 94 11 82238710 82238801 Rat region 60006 D11Got80 202 11 83226085 83226286 Rat region 60006 D11Got80 202 11 83226084 83226286 Rat region 66437 D11Uia3 258 11 85459325 85459586 Rat region 66437 D11Uia3 258 11 85459324 85459586 Rat region 66624 D11Mco1 240 11 74287097 74287332 Rat region 66624 D11Mco1 240 11 74287096 74287332 Rat region 67350 D11Arb13 183 11 74367680 74367862 Rat region 67350 D11Arb13 183 11 74367678 74367862 Rat region 1630206 D11Wox15 11 76902891 76903043 Rat region 1630263 D0Got310 118 11 69659078 69659195 Rat region 1627700 D0Got924 240 11 85161514 85161753 Rat region 1627941 D11Got112 206 11 74375952 74376157 Rat region 1628497 D0Uwm3 174 11 82869039 82869212 Rat region 1638865 D11Wox17 168 11 85677091 85677258 Rat region 1635913 D0Got331 152 11 87635377 87635528 Rat region 1637815 D0Got353 92 11 69540531 69540622 Rat region 1634138 D11Cebr1 265 11 80661816 80662080 Rat region 1634385 D11Wox16 236 11 82438087 82438322 Rat region 7193119 Stk22a 548 11 85079786 85080333 Rat region 7193135 Ephb3 179 11 82028205 82028383 Rat region 7193099 AI059538 205 11 85431402 85431606 Rat region 7192369 Ephb3 1434 11 82036729 82038162 Rat region 5035733 STS-L28957 186 11 70133576 70133761 Rat region 5035859 PMC24644P1 786 11 79125196 79125981 Rat region 5038714 AW742788 247 11 85967408 85967654 Rat region 5038870 RH127380 185 11 84271502 84271686 Rat region 5036547 Zfp148 205 11 69104833 69105037 Rat region 5039000 RH127455 193 11 79723498 79723690 Rat region 5036591 AU048531 123 11 76766881 76767003 Rat region 5035512 EST9C6 137 11 84744441 84744577 Rat region 5035540 Dgcr8 439 11 84703705 84704143 Rat region 5035604 T03659 221 11 82478402 82478763 Rat region 5033891 RH140510 235 11 85518022 85518256 Rat region 5033895 RH140526 111 11 70591912 70592022 Rat region 5033949 RH140729 212 11 79571394 79571605 Rat region 5025946 RH130304 214 11 70146095 70146308 Rat region 5026100 RH130910 201 11 80248706 80248906 Rat region 5026100 RH130910 201 11 80230715 80230915 Rat region 5028579 AA959454 242 11 77950460 77950701 Rat region 5028581 AI480666 219 11 69099012 69099230 Rat region 5031486 AU048165 253 11 80015074 80015325 Rat region 5034071 RH141250 180 11 82333583 82333762 Rat region 5034077 RH141276 150 11 68824829 68824978 Rat region 5031544 AU047979 278 11 79008112 79008389 Rat region 5026396 RH132045 193 11 71166182 71166374 Rat region 5031818 AU047052 153 11 71780598 71780745 Rat region 5034390 RH118405 153 11 82535115 82535267 Rat region 5026572 RH132726 204 11 82990925 82991128 Rat region 5031964 AU046542 203 11 86478802 86478999 Rat region 5034516 BI274180 163 11 85579515 85579677 Rat region 5029359 RH144497 206 11 84678432 84678637 Rat region 5032185 RH126332 243 11 85967572 85967814 Rat region 5034766 AI104888 250 11 83122223 83122472 Rat region 5026856 RH133792 204 11 70641035 70641238 Rat region 5029439 Muc4 0 11 69830665 69831801 Rat region 5035116 Stk22b 245 11 85074919 85075163 Rat region 5026936 RH134103 207 11 85727348 85727554 Rat region 5027064 A001T42 114 11 85132424 85132537 Rat region 5027077 RH70256 194 11 82027703 82027896 Rat region 5029679 BF386968 159 11 86082110 86082268 Rat region 5032425 AI315043 150 11 85137882 85138031 Rat region 5032477 RH126681 213 11 81032976 81033188 Rat region 5035334 AW529860 192 11 73993776 73993967 Rat region 5035370 BQ190983 192 11 70707350 70707541 Rat region 5029881 BE097295 183 11 85345555 85345737 Rat region 5029925 BE097868 151 11 70449992 70450142 Rat region 5030011 BI279621 180 11 85972965 85973144 Rat region 5035190 AW528025 186 11 82634866 82635168 Rat region 5035202 AW535442 151 11 81215886 81216036 Rat region 5035228 BM390883 154 11 82911072 82911225 Rat region 5027501 X51468 95 11 79126084 79126179 Rat region 5027503 AF037260 116 11 69927724 69927839 Rat region 5030099 BE110286 151 11 69101044 69101194 Rat region 5032869 RH136786 127 11 70386705 70386831 Rat region 5032977 RH137176 204 11 82570596 82570799 Rat region 5027647 BB165076 74 11 80409132 80409205 Rat region 5030263 BE111642 173 11 85910860 85911032 Rat region 5033039 RH137364 168 11 68575790 68575957 Rat region 5025140 AW554570 120 11 85132407 85132526 Rat region 5025142 RH126722 203 11 77950564 77950766 Rat region 5025280 RH127712 188 11 69784353 69784540 Rat region 5027911 29.MMHAP83FLB5.seq 216 11 86377625 86377840 Rat region 5025292 RH127760 186 11 80696682 80696867 Rat region 5028027 MHAa22f12.seq 196 11 85672899 85673094 Rat region 5030687 BF398840 165 11 69926780 69926944 Rat region 5033435 RH138822 121 11 85179793 85179913 Rat region 5028077 U41465 86 11 79029530 79029615 Rat region 5028111 Z49086 200 11 82027703 82027902 Rat region 5028179 D16Mit101 157 11 79288027 79288183 Rat region 5028187 D16Mit229 105 11 71331035 71331139 Rat region 5033627 RH139519 199 11 69478690 69478889 Rat region 5025616 RH129005 211 11 79582971 79583181 Rat region 5025738 RH129469 217 11 69097148 69097364 Rat region 5030955 BF399765 192 11 70967838 70968029 Rat region 5033745 RH139965 210 11 70305421 70305630 Rat region 5025800 RH129723 220 11 79723346 79723565 Rat region 5051901 RH94723 169 11 84581466 84581634 Rat region 5051917 RH94733 144 11 80814327 80814470 Rat region 5055047 RH143575 257 11 68616063 68616319 Rat region 5053505 RH142687 115 11 86022172 86022286 Rat region 5056437 RH144378 161 11 82493105 82493265 Rat region 5054021 RH142985 194 11 84496817 84497010 Rat region 5054059 RH143007 164 11 75364173 75364336 Rat region 5056639 RH144494 100 11 69662627 69662722 Rat region 5057470 AA858773 207 11 71342515 71342721 Rat region 5052163 RH94876 259 11 79125553 79125811 Rat region 5055459 RH143813 175 11 82982173 82982347 Rat region 5054599 RH143317 101 11 69356063 69356163 Rat region 5054627 RH143333 183 11 71165353 71165535 Rat region 5059406 AI059538 243 11 85431262 85431504 Rat region 5059456 AW530915 165 11 70769193 70769357 Rat region 5054785 RH143424 108 11 82447650 82447757 Rat region 5057894 BI277248 166 11 82478314 82478479 Rat region 5058540 AI555746 203 11 82809070 82809272 Rat region 5058572 BI290823 177 11 77952617 77952793 Rat region 5058578 BI284294 204 11 85740953 85741156 Rat region 5058624 AA899041 180 11 71528226 71528405 Rat region 5055857 RH144042 183 11 70466123 70466305 Rat region 5059564 AI556444 212 11 86584197 86584408 Rat region 5056829 RH144604 181 11 84372456 84372636 Rat region 5055453 RH143810 265 11 82746829 82747093 Rat region 5059044 BE102735 203 11 84656436 84656639 Rat region 5059784 BE097864 178 11 68060133 68060310 Rat region 5055659 RH143928 155 11 69928042 69928196 Rat region 5060026 BF400290 195 11 86088341 86088535 Rat region 5058510 AW523989 170 11 81451695 81451864 Rat region 5059086 BF387449 156 11 81664144 81664299 Rat region 5050156 RH133894 187 11 76103304 76104926 Rat region 5050194 RH133916 216 11 85965407 85965622 Rat region 5059248 BF387879 153 11 82418413 82418565 Rat region 5059324 BG377348 150 11 79673748 79673897 Rat region 5057786 BI277102 184 11 75296983 75297166 Rat region 5050664 RH134187 202 11 73114793 73115487 Rat region 5050692 RH134203 188 11 85841800 85841987 Rat region 5053861 RH142893 109 11 74212403 74212514 Rat region 5052543 AI159736 311 11 68771988 68772298 Rat region 5052575 RH125652 250 11 85965294 85965543 Rat region 5052595 RH125835 202 11 85740857 85741058 Rat region 5050990 RH134374 203 11 80276898 80277100 Rat region 5051094 RH134436 181 11 79950676 79950856 Rat region 5050270 RH133960 184 11 69100575 69100758 Rat region 5051190 RH134491 189 11 69927596 69927784 Rat region 5051202 RH134498 212 11 85352398 85352610 Rat region 5054211 RH143094 142 11 82441840 82441981 Rat region 5051655 AW554757 134 11 81224997 81225130 Rat region 5051657 AA536802 86 11 70644583 70644668 Rat region 5051102 RH134441 188 11 87183107 87183293 Rat region 5044120 RH130421 208 11 78544322 78544529 Rat region 5044170 RH130450 206 11 84199570 84199775 Rat region 5040744 RH128458 212 11 82421709 82421920 Rat region 5040850 RH128519 185 11 69748437 69748621 Rat region 5043282 RH129936 220 11 79932201 79932420 Rat region 5041146 RH128689 187 11 82585331 82585517 Rat region 5043596 RH130116 185 11 85666750 85666934 Rat region 5043776 RH130221 154 11 85901125 85901278 Rat region 5045408 RH131161 192 11 70129473 70129664 Rat region 5041328 RH128794 197 11 68934164 68934360 Rat region 5045800 RH131386 193 11 78543660 78543852 Rat region 5041852 RH129096 189 11 86084339 86084527 Rat region 5044674 RH130739 188 11 82535448 82535635 Rat region 5044682 RH130743 198 11 83091510 83091707 Rat region 5044688 RH130747 197 11 77950677 77950873 Rat region 5046310 RH131679 216 11 86614842 86615057 Rat region 5046370 RH131714 217 11 72226201 72226417 Rat region 5044344 RH130549 206 11 84425235 84425440 Rat region 5044360 RH130558 219 11 80476483 80476701 Rat region 5045424 RH131170 199 11 86329831 86330029 Rat region 5045434 RH131176 203 11 68864685 68864887 Rat region 5045470 RH131196 150 11 85049108 85049257 Rat region 5046532 RH131807 183 11 85179396 85179578 Rat region 5046560 RH131824 184 11 86951563 86951746 Rat region 5047452 RH132336 216 11 71522284 71522499 Rat region 5046114 RH131566 187 11 69102447 69102633 Rat region 5045822 RH131398 184 11 83476433 83476616 Rat region 5049088 RH133279 213 11 79434425 79434637 Rat region 5049282 RH133391 202 11 85967563 85967764 Rat region 5049286 RH133393 198 11 70590324 70590521 Rat region 5046598 RH131845 188 11 83309194 83309382 Rat region 5047918 RH132604 191 11 85521144 85521334 Rat region 5048034 RH132670 206 11 81629026 81629231 Rat region 5048092 RH132703 195 11 82990925 82991119 Rat region 5049372 RH133443 184 11 83898517 83898700 Rat region 5049382 RH133449 152 11 84370814 84370965 Rat region 5047042 RH132100 218 11 70362446 70362663 Rat region 5047066 RH132114 181 11 80341002 80341182 Rat region 5048210 RH132771 213 11 73250926 73251138 Rat region 5048260 RH132800 186 11 70208218 70208405 Rat region 5048268 RH132805 181 11 86150602 86150783 Rat region 5048298 RH132822 205 11 85477145 85477349 Rat region 5049660 RH133608 209 11 78279749 78279957 Rat region 5041962 RH129159 215 11 82423347 82423561 Rat region 5041978 RH129168 192 11 81224652 81224843 Rat region 5042162 RH129276 206 11 70641144 70641349 Rat region 5047310 RH132254 186 11 81635566 81635751 Rat region 5047412 RH132313 210 11 82702029 82702238 Rat region 5039898 RH127971 220 11 79125892 79126111 Rat region 5042436 RH129433 193 11 73421019 73421211 Rat region 5042628 RH129549 185 11 70652353 70652537 Rat region 5042708 RH129598 165 11 83260913 83261077 Rat region 5042874 RH129696 164 11 85879933 85880096 Rat region 5040462 RH128297 183 11 70130333 70130515 Rat region 5039804 RH127916 193 11 85739038 85739230 Rat region 5039896 RH127970 186 11 82595563 82595748 Rat region 5040022 RH128045 194 11 84581252 84581445 Rat region 5042650 RH129561 152 11 85879933 85880084 Rat region 5041058 RH128639 194 11 82989598 82989791 Rat region 5041544 RH128918 182 11 84513381 84513562 Rat region 5074948 RH138311 158 11 84371558 84371715 Rat region 5071946 RH135376 200 11 81128997 81129196 Rat region 5071954 RH135381 188 11 85927282 85927469 Rat region 5072126 RH136666 203 11 80902245 80902447 Rat region 5074072 RH137804 129 11 73933450 73933578 Rat region 5075310 RH138521 153 11 78466864 78467016 Rat region 5075786 RH138796 242 11 72627445 72627686 Rat region 5072460 RH136862 189 11 84731583 84731771 Rat region 5075996 RH138917 138 11 82456333 82456470 Rat region 5075996 RH138917 138 11 69316683 69316820 Rat region 5076052 RH138951 155 11 84698287 84698441 Rat region 5076114 RH138987 154 11 69689766 69689919 Rat region 5072640 RH136967 185 11 70304951 70305135 Rat region 5072664 RH136981 206 11 87247409 87247614 Rat region 5074488 RH138046 187 11 85430103 85430291 Rat region 5076700 RH139328 125 11 69700023 69700147 Rat region 5076782 RH139375 102 11 69697992 69698093 Rat region 5077068 RH139542 208 11 85842787 85842994 Rat region 5075468 RH138611 182 11 69670944 69671125 Rat region 5074888 RH138276 134 11 70784355 70784488 Rat region 5074914 RH138291 154 11 68511288 68511441 Rat region 5080616 RH141682 184 11 71659959 71660142 Rat region 5080664 RH141710 0 11 87248119 87248301 Rat region 5080708 RH141735 198 11 81215453 81215650 Rat region 5077282 RH139667 196 11 70642616 70642811 Rat region 5075060 RH138375 210 11 70093724 70094390 Rat region 5077298 RH139676 217 11 80816367 80816583 Rat region 5078158 RH140177 204 11 81507088 81507291 Rat region 5079824 RH141224 196 11 69698355 69698550 Rat region 5080006 RH141328 180 11 69673319 69673498 Rat region 5078122 RH140156 201 11 74481117 74481317 Rat region 5080100 RH141383 187 11 77953354 77953540 Rat region 5080124 RH141397 151 11 82522116 82522266 Rat region 5078458 RH140354 138 11 69478788 69478926 Rat region 5070870 RH134753 190 11 81627840 81628029 Rat region 5070878 RH134757 199 11 85350893 85351091 Rat region 5072930 RH137136 181 11 84427120 84427300 Rat region 5080276 RH141486 185 11 81223313 81223497 Rat region 5080312 RH141507 205 11 82188353 82188552 Rat region 5080362 RH141535 191 11 69823302 69823492 Rat region 5070902 RH134772 208 11 83396312 83396519 Rat region 5070948 RH134799 187 11 84495091 84495277 Rat region 5073500 RH137472 202 11 85072675 85072876 Rat region 5080534 RH141635 205 11 69661033 69661237 Rat region 5078750 RH140530 159 11 74481075 74481233 Rat region 5078876 RH140603 189 11 71109213 71109401 Rat region 5073568 RH137511 187 11 80360530 80360716 Rat region 5073766 RH137626 156 11 68611345 68611500 Rat region 5070742 RH134678 201 11 81627232 81627432 Rat region 5074634 RH138129 128 11 76084987 76085114 Rat region 5071722 RH135247 198 11 85932738 85932935 Rat region 5063408 BE107630 159 11 85845521 85845679 Rat region 5065036 BE108960 197 11 70171760 70171956 Rat region 5066784 AU048153 192 11 78493699 78493890 Rat region 5067202 AU047899 177 11 80371481 80371657 Rat region 5067466 AU047727 168 11 71413649 71413816 Rat region 5067592 AU047653 186 11 77872540 77872725 Rat region 5068534 AU047088 174 11 82868893 82869064 Rat region 5070177 RH94517 147 11 82417635 82417781 Rat region 5069250 AU046621 143 11 68082751 68083111 Rat region 5069316 AU046579 104 11 84388173 84388276 Rat region 5060040 BF388375 121 11 78158217 78158337 Rat region 5063720 BF404647 130 11 86028648 86028777 Rat region 5065136 AI044813 203 11 68624773 68624975 Rat region 5060424 BE110023 183 11 85074841 85075023 Rat region 5060432 BE110052 211 11 68363209 68363419 Rat region 5060674 BE098844 183 11 86696133 86696315 Rat region 5065572 BE109304 167 11 70073022 70073188 Rat region 5065686 BI303735 191 11 85518774 85518964 Rat region 5060958 AA874911 196 11 82585600 82585795 Rat region 5062640 BF403638 95 11 72809571 72809665 Rat region 5062746 AW534207 150 11 85984039 85984188 Rat region 5064442 AI501553 145 11 81625752 81625896 Rat region 5063828 AW535588 167 11 71525491 71525659 Rat region 5065202 BE121163 157 11 81450677 81450833 Rat region 5062340 BF403121 196 11 86088340 86088535 Rat region 5062356 BI288724 201 11 70591155 70591355 Rat region 5062404 BF397888 151 11 74327526 74327676 Rat region 5065548 BE109290 155 11 70776550 70776704 Rat region 5062524 BF403357 192 11 84734305 84734496 Rat region 5062720 AI716564 91 11 82634246 82634336 Rat region 5062736 AW534143 154 11 85074619 85074772 Rat region 5064338 AI763447 140 11 84686283 84686423 Rat region 5066088 BE116776 151 11 86943380 86943530 Rat region 5061062 BG379202 160 11 74101824 74101983 Rat region 5061096 AW532277 150 11 82400366 82400515 Rat region 5064498 BI296803 173 11 71411307 71411479 Rat region 5064576 BF399377 165 11 81664456 81664620 Rat region 5064586 BE108145 150 11 85519162 85519311 Rat region 5064592 BE108164 0 11 87233233 87233387 Rat region 5064592 BE108164 0 11 87232525 87233387 Rat region 5066232 PMC123023P2 187 11 79125847 79126033 Rat region 5063136 BI295978 183 11 79778176 79778358 Rat region 5064672 BF399547 104 11 80649522 80649625 Rat region 5066294 PMC139890P1 132 11 79953118 79953249 Rat region 5061480 BE105289 206 11 85680918 85681123 Rat region 5064858 BE108645 150 11 69703634 69703783 Rat region 5061604 BI287777 158 11 85880120 85880277 Rat region 5061654 BF396995 212 11 68396645 68396856 Rat region 5084108 AI407788 226 11 85842183 85842407 Rat region 5082311 BE119158 159 11 84681083 84681241 Rat region 5086289 AI535225 202 11 76487223 76487424 Rat region 5086355 AA850138 185 11 84196030 84196214 Rat region 5086355 AA850138 185 11 84194584 84194768 Rat region 5087422 Ephb3 695 11 82027688 82028382 Rat region 5086417 AA965213 202 11 72339118 72339319 Rat region 5086447 BM385725 192 11 69003012 69003203 Rat region 5087838 Eif4a2 188 11 79952994 79953418 Rat region 5087410 Stk22a 240 11 85079228 85079467 Rat region 5089163 AU048993 275 11 78017490 78017764 Rat region 5089961 AU049467 185 11 80052148 80052332 Rat region 5083055 BF390716 153 11 84763606 84763758 Rat region 5088064 Prodh 135 11 84921561 84921783 Rat region 5088151 UniSTS:144823 780 11 69104424 69105203 Rat region 5089255 AU049047 209 11 70782739 70782947 Rat region 5089365 AU049112 256 11 73689225 73689480 Rat region 5090861 AU050010 167 11 68925498 68925664 Rat region 5083747 AI599402 207 11 80330736 80330942 Rat region 5083883 AI010659 172 11 75296563 75296734 Rat region 5088811 AU048786 249 11 70308505 70308753 Rat region 5090435 AU049748 216 11 79429884 79430099 Rat region 5090635 AU049871 121 11 80969000 80969120 Rat region 5081517 BE117128 163 11 81127269 81127431 Rat region 5081703 BF408297 95 11 81169814 81169908 Rat region 5084416 AI176736 96 11 79907901 79907996 Rat region 5084482 AA850488 149 11 75837809 75837957 Rat region 5090159 AU049586 167 11 84718039 84718205 Rat region 5081869 BI273900 216 11 82594621 82594836 Rat region 5081967 BE118936 168 11 70630283 70630450 Rat region 5081989 BE118996 191 11 82443928 82444118 Rat region 5085513 AI045433 118 11 69698604 69698721 Rat region 5081136 RH141985 208 11 85964831 85965038 Rat region 5090253 AU049641 295 11 76993350 76993644 Rat region 5088973 AU048879 277 11 70003804 70004080 Rat region 5089203 AU049016 241 11 68553142 68553232 Rat region 5089203 AU049016 241 11 68552992 68553232 Rat region 5082667 BE119962 154 11 70589558 70589711 Rat region 5085930 AI178489 154 11 85926231 85926384 Rat region 5084522 AI169712 180 11 71130837 71131016 Rat region 5082989 BF390582 151 11 68057349 68057499 Rat region 5081326 RH142095 206 11 85477734 85477939 Rat region 5083175 BF390931 198 11 82570117 82570314 Rat region 5085629 BM383343 199 11 72874332 72874530 Rat region 5083799 AI599574 178 11 84353057 84353234 Rat region 5084044 AI408238 94 11 80415832 80415925 Rat region 5502589 RH125461 95 11 80360630 80360724 Rat region 5503240 UniSTS:237454 224 11 84730737 84730960 Rat region 5503244 UniSTS:237455 213 11 84744296 84744508 Rat region 5503922 UniSTS:256469 848 11 85060932 85061779 Rat region 5507652 AA475909 0 11 68644273 68645640 Rat region 5507697 D22S1687 184 11 85518186 85518369 Rat region 5507707 SST-112F 84 11 79125177 79125881 Rat region 5503933 UniSTS:256695 853 11 79125020 79125872 Rat region 5504488 PMC22838P1 107 11 84270081 84270187 Rat region 5504201 UniSTS:260493 479 11 85079133 85079611 Rat region 5504203 Es2el 0 11 85044658 85045667 Rat region 5504207 UniSTS:260495 143 11 85074967 85075109 Rat region 5505298 Ppp2ca 468 11 84270222 84270689 Rat region 5505300 Ppp2ca 51 11 84270657 84270707 Rat region 5505826 UniSTS:495797 1592 11 85060254 85061845 Rat region 5505998 UniSTS:496799 0 11 85065115 85065365 Rat region 5506362 UniSTS:478969 750 11 85067329 85068078 Rat region 5506469 G35720 169 11 80807374 80807542 Rat region 5507125 UniSTS:224674 192 11 68772774 68772965 Rat region 5499611 MARC_2765-2766:991933387:1 81 11 85724564 85724881 Rat region 5500298 D20S1005 80 11 79950994 79951073 Rat region 5502553 RH125315 189 11 70500851 70501039 Rat region 5502559 RH125318 186 11 85397389 85397574 Rat region 5503246 UniSTS:237474 226 11 79955451 79955676 Rat region 5500607 RH136232 214 11 85967564 85967777 Rat region 5500549 RH135933 204 11 85164369 85164572 Rat region 5503248 UniSTS:237479 202 11 72382239 72382440 Rat region 5501478 D3S1674 0 11 85649795 85649823 Rat region 5504183 UniSTS:259614 377 11 72604237 72605391 Rat region 5504199 UniSTS:260486 102 11 85074691 85074792 Rat region 5504508 PMC25851P2 85 11 76928745 76928829 Rat region 5501675 Dgcr6 0 11 84922850 84924511 Rat region 5501681 Hes1 401 11 72603554 72603954 Rat region 5505390 Ewsr1 0 11 83245576 83246368 Rat region 5502981 Ccnb1ip1 500 11 80139891 80140390 Rat region 5502981 Ccnb1ip1 500 11 79999774 80000273 Rat region 5502465 RH124940 0 11 84915322 84916722 Rat region 5502493 RH125069 110 11 85728290 85728399 Rat region Position Markers Flank 1: (D11Rat93) Map Chr Position Strand Source Rat Cytogenetic Map 11 q22   UniSTS RGSC Genome Assembly v5.0 11 72,432,813 - 72,433,053   UniSTS RGSC Genome Assembly v3.4 11 67,930,911 - 67,931,151   UniSTS RGSC Genome Assembly v3.4 11 67,930,910 - 67,931,151   RGD Rat Celera Assembly 11 65,567,691 - 65,567,931   UniSTS Genome Assembly 3.1 11 67,988,499 - 67,988,740   RGD SHRSP x BN 11 29.8399   RGD SHRSP x BN 11 29.8399   UniSTS FHH x ACI 11 48.5199   RGD Peak: (D11Rat46) Map Chr Position Strand Source RGSC Genome Assembly v5.0 11 85,534,123 - 85,534,312   UniSTS RGSC Genome Assembly v3.4 11 81,091,342 - 81,091,531   UniSTS RGSC Genome Assembly v3.4 11 81,091,341 - 81,091,531   RGD Rat Celera Assembly 11 77,714,115 - 77,714,304   UniSTS Genome Assembly 3.1 11 81,148,931 - 81,149,120   RGD RH 3.4 11 650.2   UniSTS RH 3.4 11 650.2   RGD RH 2.0 11 60.2   RGD SHRSP x BN 11 35.7599   RGD FHH x ACI 11 56.1999   RGD Flank 2: (D11Rat89) Map Chr Position Strand Source Rat Cytogenetic Map 11 p12   UniSTS RGSC Genome Assembly v5.0 11 89,414,186 - 89,414,405   UniSTS Rat Celera Assembly 11 80,949,492 - 80,949,711   UniSTS SHRSP x BN 11 38.2699   RGD SHRSP x BN 11 38.2699   UniSTS FHH x ACI 11 57.2499   RGD QTLs in Region (RGSC Genome Assembly v3.4) The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer RGD ID Symbol Name LOD P Value Trait Sub Trait Chr Start Stop Species 631506 Bp104 Blood pressure QTL 104 2.8 Blood pressure systolic 11 61504483 84560085 Rat 634339 Niddm50 Non-insulin dependent diabetes mellitus QTL 50 3.32 Glucose level fasting 11 43157054 68234781 Rat 724563 Uae10 Urinary albumin excretion QTL 10 6 Renal function urine albumin level 11 28213024 84841212 Rat 724561 Plsm4 Polydactyly-luxate syndrome (PLS) morphotypes QTL 4 .0003 Limb morphology front feet phalanges number 11 56625623 87759784 Rat 1300135 Rf19 Renal function QTL 19 3.38 Renal function salt-loaded creatinine clearance 11 41711171 84560241 Rat 70208 Niddm22 Non-insulin dependent diabetes mellitus QTL 22 3.61 Glucose level fasting 11 61504483 84560092 Rat 1300110 Stl7 Serum triglyceride level QTL 7 4.64 Lipid level salt-loaded triglyceride 11 29744366 84560241 Rat 1354593 Stl12 Serum triglyceride level QTL 12 3.36 Lipid level triglyceride 11 68234781 87759784 Rat 1354656 Bvd3 Brain ventricular dilatation QTL 3 3.64 .001 Head/brain development brain ventricular dilatation 11 77341660 84841212 Rat 1549848 Bvd6 Brain ventricular dilatation QTL 6 3.1 .0001 Head/brain development brain ventricular dilatation 11 67930910 87759784 Rat 2312566 Glom20 Glomerulus QTL 20 3.6 .001 Renal pathology 11 45232526 84560241 Rat 1558659 Tescar1 Testicular tumor resistance QTL 1 3.9 Testicular tumor resistance 11 597138 67931151 Rat 1581565 Pur10 Proteinuria QTL 10 .0001 Renal function urine protein level 11 8176422 68234781 Rat 1581572 Uae35 Urinary albumin excretion QTL 35 .0001 Renal function urine albumin level 11 8176422 68234781 Rat 2298551 Neuinf10 Neuroinflammation QTL 10 3.7 Neuroinflammation 11 31988113 81091531 Rat 2302043 Pia27 Pristane induced arthritis QTL 27 18.6 .001 Joint/bone inflammation pristane induced 11 84560085 85432136 Rat 2313105 Bss79 Bone structure and strength QTL 79 1.8 .0001 Bone structure 10 61504312 87759784 Rat 2313103 Bss80 Bone structure and strength QTL 80 2 .0001 Bone structure 10 61504312 87759784 Rat 4889859 Pur28 Proteinuria QTL 28 19.5 .001 Renal function urine protein level 11 46499941 77591279 Rat 724554 Iddm17 Insulin dependent diabetes mellitus QTL 17 .001 Glucose level 11 19445919 87759784 Rat 70180 BpQTLcluster10 Blood pressure QTL cluster 10 3.19 Blood pressure 11 35910590 80910590 Rat Additional Information RGD Curation Notes Note Type Note Reference qtl_statistics_details MAPMAKER/QTL (version1.1b) was used for LOD score calculations and composite interval mapping; MAPMAKER/EXP(version 3.0b) was used for interval mapping 68196

More on Bvd6 Genome Browser QTL Registration RGD Object Information RGD ID: 1549848 Created: 2005-09-19 Species: Rattus norvegicus Last Modified: 2005-09-19 Status: ACTIVE