Rtp2 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 11 | 90,422,553 - 90,436,684 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 11 | 76,917,904 - 76,930,760 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 11 | 76,917,904 - 76,930,327 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 11 | 85,683,400 - 85,688,323 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 11 | 78,318,613 - 78,323,536 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 11 | 77,397,705 - 77,402,628 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 11 | 80,319,177 - 80,331,599 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 11 | 80,319,177 - 80,331,599 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 11 | 80,401,494 - 80,429,935 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 11 | 79,092,578 - 79,098,266 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 11 | 75,798,200 - 75,809,685 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | q23 | NCBI | | | | |
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RTP2 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 187,698,259 - 187,715,691 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 187,698,259 - 187,702,557 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 187,416,047 - 187,420,345 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 188,898,741 - 188,903,039 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 3 | 185,847,022 - 185,851,326 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q27.3 | NCBI | | | | | HuRef | 3 | 184,820,228 - 184,824,522 (-) | NCBI | | HuRef | | | CHM1_1 | 3 | 187,379,307 - 187,383,611 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 190,515,702 - 190,533,149 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Rtp2 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 16 | 23,744,298 - 23,749,544 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 23,744,298 - 23,751,144 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 16 | 23,925,548 - 23,930,794 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 23,925,548 - 23,932,394 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 16 | 23,925,634 - 23,930,880 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 16 | 23,840,897 - 23,846,143 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 16 | 24,475,557 - 24,480,804 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | B1 | NCBI | | | | | cM Map | 16 | 15.12 | NCBI | | | | |
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Rtp2 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955420 | 20,043,153 - 20,047,082 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955420 | 20,043,153 - 20,047,082 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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RTP2 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 185,569,040 - 185,586,485 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 185,573,784 - 185,591,199 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 184,724,924 - 184,729,201 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 193,285,134 - 193,289,417 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 193,284,970 - 193,289,417 (-) | Ensembl | panpan1.1 | | panPan2 | |
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RTP2 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 34 | 20,087,395 - 20,091,248 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 34 | 20,087,226 - 20,115,428 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 34 | 24,180,280 - 24,184,080 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 34 | 20,007,412 - 20,011,212 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 34 | 20,007,243 - 20,047,268 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 34 | 20,036,044 - 20,039,837 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 34 | 20,029,799 - 20,033,599 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 34 | 20,269,685 - 20,273,481 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Rtp2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405602 | 116,327,592 - 116,332,201 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936578 | 2,419,589 - 2,423,455 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936578 | 2,419,589 - 2,423,455 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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RTP2 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 13 | 125,355,018 - 125,358,738 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 125,355,018 - 125,358,738 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 134,638,577 - 134,642,298 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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RTP2 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 15 | 81,974,322 - 81,982,793 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 15 | 81,974,561 - 81,978,207 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 55,472,123 - 55,476,438 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Rtp2 (Heterocephalus glaber - naked mole-rat) |
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