Fam131a (family with sequence similarity 131, member A)

Gene: Fam131a (family with sequence similarity 131, member A) Rattus norvegicus

Analyze

Symbol:

Fam131a

Name:

family with sequence similarity 131, member A

RGD ID:

2322069

Description:

Orthologous to human FAM131A (family with sequence similarity 131 member A); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; endosulfan; gentamycin.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC100360487; LOC100912498; protein FAM131A-like; rCG36585-like; uncharacterized protein LOC100360487

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	93,715,979 - 93,725,930 (-)	NCBI		GRCr8
mRatBN7.2	11	80,211,577 - 80,221,527 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	80,211,745 - 80,221,511 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	11	83,897,330 - 83,907,292 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	83,896,873 - 83,905,889 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	11	82,875,627 - 82,884,660 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	86,969,236 - 86,977,726 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	82,441,211 - 82,449,496 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	11	79,051,316 - 79,059,806 (-)	NCBI		Celera
Cytogenetic Map	11	q23	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

3-Methylcrotonyl-CoA carboxylase 1 deficiency (ISO)

congenital disorder of glycosylation Id (ISO)

Currarino syndrome (ISO)

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-catechin (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2-methylcholine (ISO)

4,4'-sulfonyldiphenol (ISO)

5-aza-2'-deoxycytidine (ISO)

all-trans-retinoic acid (ISO)

benzene (ISO)

benzo[a]pyrene (ISO)

bisphenol A (ISO)

cantharidin (ISO)

carbon nanotube (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

clothianidin (ISO)

crocidolite asbestos (ISO)

endosulfan (EXP)

ethanol (ISO)

gentamycin (EXP)

lead(0) (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

silicon dioxide (ISO)

temozolomide (ISO)

trichloroethene (EXP)

trovafloxacin (ISO)

valproic acid (ISO)

zinc atom (ISO)

zinc(0) (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Fam131a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	93,715,979 - 93,725,930 (-)	NCBI		GRCr8
mRatBN7.2	11	80,211,577 - 80,221,527 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	80,211,745 - 80,221,511 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	11	83,897,330 - 83,907,292 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	83,896,873 - 83,905,889 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	11	82,875,627 - 82,884,660 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	86,969,236 - 86,977,726 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	82,441,211 - 82,449,496 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	11	79,051,316 - 79,059,806 (-)	NCBI		Celera
Cytogenetic Map	11	q23	NCBI

FAM131A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	184,335,926 - 184,346,275 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	184,335,926 - 184,348,421 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	184,053,714 - 184,064,063 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	185,540,952 - 185,546,757 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	3	182,494,613 - 182,504,962 (+)	NCBI		Celera
Cytogenetic Map	3	q27.1	NCBI
HuRef	3	181,460,343 - 181,470,494 (+)	NCBI		HuRef
CHM1_1	3	184,018,173 - 184,028,522 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	187,145,186 - 187,155,541 (+)	NCBI		T2T-CHM13v2.0

Fam131a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	20,511,856 - 20,521,794 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	20,511,991 - 20,521,798 (+)	Ensembl		GRCm39 Ensembl
GRCm38	16	20,693,094 - 20,703,044 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	20,693,241 - 20,703,048 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	20,695,130 - 20,703,109 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	20,608,600 - 20,616,579 (+)	NCBI		MGSCv36	mm8
Celera	16	21,260,413 - 21,268,392 (+)	NCBI		Celera
Cytogenetic Map	16	A3	NCBI
cM Map	16	12.5	NCBI

Fam131a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	23,152,571 - 23,160,374 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	23,152,571 - 23,160,374 (-)	NCBI	ChiLan1.0	ChiLan1.0

FAM131A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	182,209,243 - 182,219,595 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	182,213,958 - 182,224,312 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	181,373,344 - 181,383,695 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	189,854,863 - 189,865,714 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	189,856,339 - 189,865,714 (+)	Ensembl	panpan1.1		panPan2

FAM131A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	17,216,651 - 17,224,214 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	17,216,864 - 17,223,872 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	21,301,064 - 21,309,788 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	17,122,978 - 17,131,702 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	17,123,067 - 17,131,702 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	17,159,878 - 17,168,602 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	17,155,962 - 17,164,686 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	17,384,918 - 17,393,642 (+)	NCBI		UU_Cfam_GSD_1.0

Fam131a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	119,447,646 - 119,456,089 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936578	5,539,582 - 5,548,001 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936578	5,540,704 - 5,547,944 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FAM131A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	122,225,956 - 122,234,810 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	122,225,519 - 122,234,810 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	131,665,642 - 131,674,575 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FAM131A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	5,073,515 - 5,084,765 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	5,074,826 - 5,084,707 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	13,851,154 - 13,862,410 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fam131a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	72,242,674 - 72,249,995 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	72,242,567 - 72,251,342 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Fam131a
10 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	223
Count of miRNA genes:	131
Interacting mature miRNAs:	144
Transcripts:	ENSRNOT00000073526, ENSRNOT00000075606
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
724554	Iddm17	Insulin dependent diabetes mellitus QTL 17		0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	11	18976208	86241447	Rat
724563	Uae10	Urinary albumin excretion QTL 10	6		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	11	27672410	82846715	Rat
1300110	Stl7	Serum triglyceride level QTL 7	4.64		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	11	29528418	82566702	Rat
1300135	Rf19	Renal function QTL 19	3.38		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	11	40946188	82566702	Rat
2312566	Glom20	Glomerulus QTL 20	3.6	0.001	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	11	44285759	82566702	Rat
1581565	Pur10	Proteinuria QTL 10		0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	44803318	82846466	Rat
1581572	Uae35	Urinary albumin excretion QTL 35		0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	44803318	82846466	Rat
724561	Plsm4	Polydactyly-luxate syndrome (PLS) morphotypes QTL 4		0.0003	forelimb integrity trait (VT:0010562)	front foot phalanges count (CMO:0001947)	11	54457534	86241447	Rat
4889521	Gluco62	Glucose level QTL 62	2.82	0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	11	55136729	82993457	Rat
7411658	Foco27	Food consumption QTL 27	16.2	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	11	56351424	86241447	Rat
631506	Bp104	Blood pressure QTL 104	2.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	11	59802794	82566545	Rat
70208	Niddm22	Non-insulin dependent diabetes mellitus QTL 22	3.61		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	11	59802794	82566553	Rat
10058954	Gmadr7	Adrenal mass QTL 7	2.49	0.0049	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	11	60346590	86241447	Rat
1549848	Bvd6	Brain ventricular dilatation QTL 6	3.1	0.0001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	11	66113321	82169223	Rat
634339	Niddm50	Non-insulin dependent diabetes mellitus QTL 50	3.32		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	11	66422148	86241447	Rat
1354593	Stl12	Serum triglyceride level QTL 12	3.36		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	11	66422148	86241447	Rat
1354656	Bvd3	Brain ventricular dilatation QTL 3	3.64	0.001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	11	69446070	82846715	Rat
10450831	Scl80	Serum cholesterol level QTL 80	4.7	0.01	blood LDL cholesterol amount (VT:0000181)	blood low density lipoprotein cholesterol level (CMO:0000053)	11	76957131	83051965	Rat

Markers in Region

RH143094

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	80,212,203 - 80,212,345 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	82,876,712 - 82,876,853	NCBI	Rnor6.0
Rnor_6.0	11	83,897,943 - 83,898,084	NCBI	Rnor6.0
Rnor_5.0	11	86,969,861 - 86,970,002	UniSTS	Rnor5.0
Rnor_5.0	11	85,955,805 - 85,955,946	UniSTS	Rnor5.0
RGSC_v3.4	11	82,441,840 - 82,441,981	UniSTS	RGSC3.4
Celera	11	79,051,941 - 79,052,082	UniSTS
RH 3.4 Map	11	656.5	UniSTS

RH143424

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	80,218,012 - 80,218,120 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	82,882,522 - 82,882,629	NCBI	Rnor6.0
Rnor_6.0	11	83,903,753 - 83,903,860	NCBI	Rnor6.0
Rnor_5.0	11	86,975,671 - 86,975,778	UniSTS	Rnor5.0
Rnor_5.0	11	85,961,615 - 85,961,722	UniSTS	Rnor5.0
RGSC_v3.4	11	82,447,650 - 82,447,757	UniSTS	RGSC3.4
Celera	11	79,057,751 - 79,057,858	UniSTS
RH 3.4 Map	11	656.9	UniSTS

BE118996

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	80,214,291 - 80,214,482 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	83,900,031 - 83,900,221	NCBI	Rnor6.0
Rnor_6.0	11	82,878,800 - 82,878,990	NCBI	Rnor6.0
Rnor_5.0	11	86,971,949 - 86,972,139	UniSTS	Rnor5.0
Rnor_5.0	11	85,957,893 - 85,958,083	UniSTS	Rnor5.0
RGSC_v3.4	11	82,443,928 - 82,444,118	UniSTS	RGSC3.4
Celera	11	79,054,029 - 79,054,219	UniSTS
RH 3.4 Map	11	656.5	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001421442	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001421443	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_002727913	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768817	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768818	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768834	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598185	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088956	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088957	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270225	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC110855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000073526 ⟹ ENSRNOP00000065591

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	80,211,745 - 80,216,632 (-)	Ensembl
Rnor_6.0 Ensembl	11	82,875,627 - 82,884,660 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000075606 ⟹ ENSRNOP00000066988

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	80,211,745 - 80,221,511 (-)	Ensembl
Rnor_6.0 Ensembl	11	83,896,873 - 83,905,889 (-)	Ensembl

RefSeq Acc Id:

NM_001421442 ⟹ NP_001408371

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,715,995 - 93,725,919 (-)	NCBI
mRatBN7.2	11	80,211,593 - 80,221,516 (-)	NCBI

RefSeq Acc Id:

NM_001421443 ⟹ NP_001408372

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,715,995 - 93,724,271 (-)	NCBI
mRatBN7.2	11	80,211,593 - 80,219,868 (-)	NCBI

RefSeq Acc Id:

XM_008768817 ⟹ XP_008767039

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,715,979 - 93,723,019 (-)	NCBI
mRatBN7.2	11	80,211,577 - 80,218,616 (-)	NCBI

Sequence:

show sequence

CGCCTTTTCTGTGCATGTTTGGCGGGGTGTGGCGTTCACATTGAGGGTTCGTGTGACCCCTCCC
CGTTCCTGCTTCACCATCCTGCTTCGGGCTCTCTTTTTCCTGCTAGCGGAGGCGCTATCCGGCA
GGCCGCCCCCGCGCCGGTCTGCTCTGCTCGGCGTGGTGCCAGCGGGCTGGCTTGCTAACGCCTT
CGGTGCTGACGTCAGCGCATCCCAGGCCGTATCCCGGGAGACCCTGTTGCATGGTGATGGGTTG
CCAGGGAGATATACACCTTTTCTCTGGGCCAGGGCCGCAGCTGCGCGGAGCGTCGCCCGGCATG
GATGGCCCCGGCTGGGGGAAAAGAGGGGAGGGAGGGAGAGCGGGCCAGGAAACACCCGCCAGGT
TCTCCTTCCCACAGGCCTGGCCAGAGGCTATCGGCGCCAATCAGGAGGCCCTGTCAGTCAGGTG
AATGTTGGAGACACAGTCGCGATGCTGCCCAAGTCCCGGAGAGCTCTAACCATCCAGGAGATTG
CCGCGCTGGCCAGATCGTCCCTGCATGGTATTTCCCAGGTAGTGAAGGACCACGTGACCAAGCC
CACAGCCATGGCCCAGGGCCGTGTGGCTCACCTTATCGAATGGAAGGGCTGGAGCAAGCCTAGT
GACTCACCGGCTGCTCTGGAATCAGCCTTTTCCTCCTATTCAGACCTCAGTGAGGGCGAACAAG
AGGCTCGCTTTGCAGCAGGAGTGGCCGAGCAGTTTGCTATTGCAGAAGCCAAGCTCCGGGCATG
GTCTTCAGTGGACGGCGATGACTCCACGGACGATTCTTATGATGAGGACTTTACTGGGGGAGCT
GATACAGACATGGCTGGACCTCTGGGGTCCCACCTCCAGGACCTCTTCACAGGTCGTAGATTCT
CCCGGCCTGTGCGCCAGGGCTCTGTGGAACCAGAGAGCGACTGTTCACAGACCGTGTCCCCGGA
TACCCTGTGCTCTAGTCTGTGCAGCCTGGAGGATGGGTTGCTGGGCTCCCCAGCCAGGATGACC
TCCCAGATGTTGGGTGAAGAGCTGCTCCTTGCTAGACTGCCCCCGAGCCGGGAAAGTGCCTTCC
GCAGCCTGGGTCCGCTGGAGGCCCAGGACTCGCTTTACAACTCACCGCTCTCAGAATCCTGCCT
TTCCCCTGCCGAGGAGGAGCCCGATTCTTGCAAGGACTGCCAGCTGCTCTGCCCACTGCCCACA
GGCAGCTGGGAACGACAGCAGCAAGTTTCTGAGGTGGCCTCTTCTGGGGTCGCATCCTTAGATG
AGGATGAGGTGGACCAGTGACCCAGACGTGCCCGGCGGCACATCTCCCCAGGCCGCTGCCTGGG
GCGGAGCCTCTGTGGCCAAACGTGGGCTCTGAAGCTTTAGAGGGCTTCTGGGAGCACTCACTTC
TCCGTTGTGTGTTTTGCATGAAAGTGTTTGGAGAGGAGGCAGGGGCCAGGCTAGGGGCGCATGT
CCTGCTTCCACTCTTGGGGTTTGCCGGGGCTTGCCCGGGGCCTCTGGGGCATGGCTACAGCTGT
GGCAGACAGTGACGTTCATGTTTCTTGAATCCAAAATGCCACATTTCCTCCTGGGATGTGAACC
TGAGAGGGTTGTGGCTGGGCTGGGAAGGTGGAAACGGAGGAAGCCCGGCCACACATCCTCCACC
CTCTCCCATGCCCCTCTCCTCTGCTTTTCTCTTCCAAGTCCATGTGCAGTGCTTGACTGAACCA
CCTCCCCCTGTGGGGCTGGCTCCTGCCCTGCCGGAGTCTACAGATTGAGCCGTCCCCTAAGGGT
CCCCTTGCCTACCTGGGCTCTGCTGTGCTTTCCCCCTCCATTGTCTCTAAACCTTTTTTTTCCC
TAAAGACAGGGGGCTTCTGGTCTGTTCTTTGAGCCGATCTTCTTTGGGAGGCACTGGGGATGAT
GAAAGAGTGTGCCCTTGCCCCTCTCTCCTTCCCTCCCCTCTACCCCGGCCCTTTCCCAGCATGG
CAAGGTTGTGTGGGTACATGCAGAGTCTCAGTAGGGCGGAGCTGGAAAATGGACGGGCTCTGGT
TGTTACCGAGCCGGGAGGGCCTTGTCTTTTCATAGAGGACCACAAGGGGGCCACCTGGGGAGCC
CGATTTGTGCCAATGAATGGACAGCACGAGGGAGTAGCTGTCCTTGGGGGAGGAAAGAGGGTAG
TGCTTTTCTTGGTAGATGGAAGGCTGTAGCCACAGTGATAGGGGGCCCTGTCCCAGGGAGGGTG
TTGCAGATCAGGCAGTGGAGGCCTCTGGCAGTTCTGATATTACGGGGACACTGGGCTTGGTAGG
TGGCTGCACCGATGAATCTCAGAGGCTTGGGCAATAGGTAAGAGGATCCAAGGTGAAGAAAATA
TGAGCCAATAGCACAAGTGTTCTATACATGAGTGGCTAATTAGGTGTTTATTCTATTTATTGTT
TTATTAAATTAATATAAAAATC

hide sequence

RefSeq Acc Id:

XM_008768818 ⟹ XP_008767040

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,715,979 - 93,725,929 (-)	NCBI
mRatBN7.2	11	80,211,577 - 80,221,527 (-)	NCBI

Sequence:

show sequence

GGGTGGGCACGGCCCCGCGCTTACGTCACCGGCCCTGTTCCCCTCTCTCGGGAGCGGCAGCAGA
CGCGCTGCTCCCACCCCCTCCCCTTCTCACAGGCTGTCCCCTCCCTGGTGGTGACCGCGGCCCG
ACCCTCTGCAAGGCGATGGCCCGGGTCCCGAGCGCGGGCTAGCGTGCCTGGGTGCCCTGCCATG
GGCTGTATTGGCTCTCGGCGCTCAGCCGGTCAGGGTGAATGTTGGAGACACAGTCGCGATGCTG
CCCAAGTCCCGGAGAGCTCTAACCATCCAGGAGATTGCCGCGCTGGCCAGATCGTCCCTGCATG
GTATTTCCCAGGTAGTGAAGGACCACGTGACCAAGCCCACAGCCATGGCCCAGGGCCGTGTGGC
TCACCTTATCGAATGGAAGGGCTGGAGCAAGCCTAGTGACTCACCGGCTGCTCTGGAATCAGCC
TTTTCCTCCTATTCAGACCTCAGTGAGGGCGAACAAGAGGCTCGCTTTGCAGCAGGAGTGGCCG
AGCAGTTTGCTATTGCAGAAGCCAAGCTCCGGGCATGGTCTTCAGTGGACGGCGATGACTCCAC
GGACGATTCTTATGATGAGGACTTTACTGGGGGAGCTGATACAGACATGGCTGGACCTCTGGGG
TCCCACCTCCAGGACCTCTTCACAGGTCGTAGATTCTCCCGGCCTGTGCGCCAGGGCTCTGTGG
AACCAGAGAGCGACTGTTCACAGACCGTGTCCCCGGATACCCTGTGCTCTAGTCTGTGCAGCCT
GGAGGATGGGTTGCTGGGCTCCCCAGCCAGGATGACCTCCCAGATGTTGGGTGAAGAGCTGCTC
CTTGCTAGACTGCCCCCGAGCCGGGAAAGTGCCTTCCGCAGCCTGGGTCCGCTGGAGGCCCAGG
ACTCGCTTTACAACTCACCGCTCTCAGAATCCTGCCTTTCCCCTGCCGAGGAGGAGCCCGATTC
TTGCAAGGACTGCCAGCTGCTCTGCCCACTGCCCACAGGCAGCTGGGAACGACAGCAGCAAGTT
TCTGAGGTGGCCTCTTCTGGGGTCGCATCCTTAGATGAGGATGAGGTGGACCAGTGACCCAGAC
GTGCCCGGCGGCACATCTCCCCAGGCCGCTGCCTGGGGCGGAGCCTCTGTGGCCAAACGTGGGC
TCTGAAGCTTTAGAGGGCTTCTGGGAGCACTCACTTCTCCGTTGTGTGTTTTGCATGAAAGTGT
TTGGAGAGGAGGCAGGGGCCAGGCTAGGGGCGCATGTCCTGCTTCCACTCTTGGGGTTTGCCGG
GGCTTGCCCGGGGCCTCTGGGGCATGGCTACAGCTGTGGCAGACAGTGACGTTCATGTTTCTTG
AATCCAAAATGCCACATTTCCTCCTGGGATGTGAACCTGAGAGGGTTGTGGCTGGGCTGGGAAG
GTGGAAACGGAGGAAGCCCGGCCACACATCCTCCACCCTCTCCCATGCCCCTCTCCTCTGCTTT
TCTCTTCCAAGTCCATGTGCAGTGCTTGACTGAACCACCTCCCCCTGTGGGGCTGGCTCCTGCC
CTGCCGGAGTCTACAGATTGAGCCGTCCCCTAAGGGTCCCCTTGCCTACCTGGGCTCTGCTGTG
CTTTCCCCCTCCATTGTCTCTAAACCTTTTTTTTCCCTAAAGACAGGGGGCTTCTGGTCTGTTC
TTTGAGCCGATCTTCTTTGGGAGGCACTGGGGATGATGAAAGAGTGTGCCCTTGCCCCTCTCTC
CTTCCCTCCCCTCTACCCCGGCCCTTTCCCAGCATGGCAAGGTTGTGTGGGTACATGCAGAGTC
TCAGTAGGGCGGAGCTGGAAAATGGACGGGCTCTGGTTGTTACCGAGCCGGGAGGGCCTTGTCT
TTTCATAGAGGACCACAAGGGGGCCACCTGGGGAGCCCGATTTGTGCCAATGAATGGACAGCAC
GAGGGAGTAGCTGTCCTTGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGTAGATGGAAGGCTGT
AGCCACAGTGATAGGGGGCCCTGTCCCAGGGAGGGTGTTGCAGATCAGGCAGTGGAGGCCTCTG
GCAGTTCTGATATTACGGGGACACTGGGCTTGGTAGGTGGCTGCACCGATGAATCTCAGAGGCT
TGGGCAATAGGTAAGAGGATCCAAGGTGAAGAAAATATGAGCCAATAGCACAAGTGTTCTATAC
ATGAGTGGCTAATTAGGTGTTTATTCTATTTATTGTTTTATTAAATTAATATAAAAATC

hide sequence

RefSeq Acc Id:

XM_017598227 ⟹ XP_017453716

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,715,979 - 93,722,908 (-)	NCBI
mRatBN7.2	11	80,211,577 - 80,218,532 (-)	NCBI

Sequence:

show sequence

AAGGAGAGGGACGGAGGATGGGCCTGAGGTCAAGGGGCAGGTGGAGGCCGCTTGTGCCAGGTGG
AACCAACCATGATGGAGGAGAATTAGGTGAATGTTGGAGACACAGTCGCGATGCTGCCCAAGTC
CCGGAGAGCTCTAACCATCCAGGAGATTGCCGCGCTGGCCAGATCGTCCCTGCATGGTATTTCC
CAGGTAGTGAAGGACCACGTGACCAAGCCCACAGCCATGGCCCAGGGCCGTGTGGCTCACCTTA
TCGAATGGAAGGGCTGGAGCAAGCCTAGTGACTCACCGGCTGCTCTGGAATCAGCCTTTTCCTC
CTATTCAGACCTCAGTGAGGGCGAACAAGAGGCTCGCTTTGCAGCAGGAGTGGCCGAGCAGTTT
GCTATTGCAGAAGCCAAGCTCCGGGCATGGTCTTCAGTGGACGGCGATGACTCCACGGACGATT
CTTATGATGAGGACTTTACTGGGGGAGCTGATACAGACATGGCTGGACCTCTGGGGTCCCACCT
CCAGGACCTCTTCACAGGTCGTAGATTCTCCCGGCCTGTGCGCCAGGGCTCTGTGGAACCAGAG
AGCGACTGTTCACAGACCGTGTCCCCGGATACCCTGTGCTCTAGTCTGTGCAGCCTGGAGGATG
GGTTGCTGGGCTCCCCAGCCAGGATGACCTCCCAGATGTTGGGTGAAGAGCTGCTCCTTGCTAG
ACTGCCCCCGAGCCGGGAAAGTGCCTTCCGCAGCCTGGGTCCGCTGGAGGCCCAGGACTCGCTT
TACAACTCACCGCTCTCAGAATCCTGCCTTTCCCCTGCCGAGGAGGAGCCCGATTCTTGCAAGG
ACTGCCAGCTGCTCTGCCCACTGCCCACAGGCAGCTGGGAACGACAGCAGCAAGTTTCTGAGGT
GGCCTCTTCTGGGGTCGCATCCTTAGATGAGGATGAGGTGGACCAGTGACCCAGACGTGCCCGG
CGGCACATCTCCCCAGGCCGCTGCCTGGGGCGGAGCCTCTGTGGCCAAACGTGGGCTCTGAAGC
TTTAGAGGGCTTCTGGGAGCACTCACTTCTCCGTTGTGTGTTTTGCATGAAAGTGTTTGGAGAG
GAGGCAGGGGCCAGGCTAGGGGCGCATGTCCTGCTTCCACTCTTGGGGTTTGCCGGGGCTTGCC
CGGGGCCTCTGGGGCATGGCTACAGCTGTGGCAGACAGTGACGTTCATGTTTCTTGAATCCAAA
ATGCCACATTTCCTCCTGGGATGTGAACCTGAGAGGGTTGTGGCTGGGCTGGGAAGGTGGAAAC
GGAGGAAGCCCGGCCACACATCCTCCACCCTCTCCCATGCCCCTCTCCTCTGCTTTTCTCTTCC
AAGTCCATGTGCAGTGCTTGACTGAACCACCTCCCCCTGTGGGGCTGGCTCCTGCCCTGCCGGA
GTCTACAGATTGAGCCGTCCCCTAAGGGTCCCCTTGCCTACCTGGGCTCTGCTGTGCTTTCCCC
CTCCATTGTCTCTAAACCTTTTTTTTCCCTAAAGACAGGGGGCTTCTGGTCTGTTCTTTGAGCC
GATCTTCTTTGGGAGGCACTGGGGATGATGAAAGAGTGTGCCCTTGCCCCTCTCTCCTTCCCTC
CCCTCTACCCCGGCCCTTTCCCAGCATGGCAAGGTTGTGTGGGTACATGCAGAGTCTCAGTAGG
GCGGAGCTGGAAAATGGACGGGCTCTGGTTGTTACCGAGCCGGGAGGGCCTTGTCTTTTCATAG
AGGACCACAAGGGGGCCACCTGGGGAGCCCGATTTGTGCCAATGAATGGACAGCACGAGGGAGT
AGCTGTCCTTGGGGGAGGAAAGAGGGTAGTGCTTTTCTTGGTAGATGGAAGGCTGTAGCCACAG
TGATAGGGGGCCCTGTCCCAGGGAGGGTGTTGCAGATCAGGCAGTGGAGGCCTCTGGCAGTTCT
GATATTACGGGGACACTGGGCTTGGTAGGTGGCTGCACCGATGAATCTCAGAGGCTTGGGCAAT
AGGTAAGAGGATCCAAGGTGAAGAAAATATGAGCCAATAGCACAAGTGTTCTATACATGAGTGG
CTAATTAGGTGTTTATTCTATTTATTGTTTTATTAAATTAATATAAAAATC

hide sequence

RefSeq Acc Id:

XM_039088956 ⟹ XP_038944884

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,717,522 - 93,724,487 (-)	NCBI
mRatBN7.2	11	80,213,447 - 80,220,084 (-)	NCBI

RefSeq Acc Id:

XM_039088957 ⟹ XP_038944885

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,715,979 - 93,725,929 (-)	NCBI
mRatBN7.2	11	80,211,577 - 80,221,527 (-)	NCBI

RefSeq Acc Id:

XM_063270225 ⟹ XP_063126295

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	93,715,979 - 93,725,930 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001408371	(Get FASTA)	NCBI Sequence Viewer
	NP_001408372	(Get FASTA)	NCBI Sequence Viewer
	XP_008767039	(Get FASTA)	NCBI Sequence Viewer
	XP_008767040	(Get FASTA)	NCBI Sequence Viewer
	XP_017453716	(Get FASTA)	NCBI Sequence Viewer
	XP_038944884	(Get FASTA)	NCBI Sequence Viewer
	XP_038944885	(Get FASTA)	NCBI Sequence Viewer
	XP_063126295	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL78019	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000065591
	ENSRNOP00000065591.3
	ENSRNOP00000066988
	ENSRNOP00000066988.3

RefSeq Acc Id:

ENSRNOP00000066988 ⟸ ENSRNOT00000075606

RefSeq Acc Id:	XP_008767040 ⟸ XM_008768818
- Peptide Label:	isoform X2
- UniProtKB:	D4ADK8 (UniProtKB/TrEMBL), A6JS88 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPKSRRALTIQEIAALARSSLHGISQVVKDHVTKPTAMAQGRVAHLIEWKGWSKPSDSPAALE SAFSSYSDLSEGEQEARFAAGVAEQFAIAEAKLRAWSSVDGDDSTDDSYDEDFTGGADTDMAGP LGSHLQDLFTGRRFSRPVRQGSVEPESDCSQTVSPDTLCSSLCSLEDGLLGSPARMTSQMLGEE LLLARLPPSRESAFRSLGPLEAQDSLYNSPLSESCLSPAEEEPDSCKDCQLLCPLPTGSWERQQ QVSEVASSGVASLDEDEVDQ hide sequence

RefSeq Acc Id:	XP_038944885 ⟸ XM_039088957
- Peptide Label:	isoform X2
- UniProtKB:	D4ADK8 (UniProtKB/TrEMBL), A6JS88 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_008767039 ⟸ XM_008768817
- Peptide Label:	isoform X2
- UniProtKB:	D4ADK8 (UniProtKB/TrEMBL), A6JS88 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPKSRRALTIQEIAALARSSLHGISQVVKDHVTKPTAMAQGRVAHLIEWKGWSKPSDSPAALE SAFSSYSDLSEGEQEARFAAGVAEQFAIAEAKLRAWSSVDGDDSTDDSYDEDFTGGADTDMAGP LGSHLQDLFTGRRFSRPVRQGSVEPESDCSQTVSPDTLCSSLCSLEDGLLGSPARMTSQMLGEE LLLARLPPSRESAFRSLGPLEAQDSLYNSPLSESCLSPAEEEPDSCKDCQLLCPLPTGSWERQQ QVSEVASSGVASLDEDEVDQ hide sequence

RefSeq Acc Id:	XP_017453716 ⟸ XM_017598227
- Peptide Label:	isoform X2
- UniProtKB:	D4ADK8 (UniProtKB/TrEMBL), A6JS88 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPKSRRALTIQEIAALARSSLHGISQVVKDHVTKPTAMAQGRVAHLIEWKGWSKPSDSPAALE SAFSSYSDLSEGEQEARFAAGVAEQFAIAEAKLRAWSSVDGDDSTDDSYDEDFTGGADTDMAGP LGSHLQDLFTGRRFSRPVRQGSVEPESDCSQTVSPDTLCSSLCSLEDGLLGSPARMTSQMLGEE LLLARLPPSRESAFRSLGPLEAQDSLYNSPLSESCLSPAEEEPDSCKDCQLLCPLPTGSWERQQ QVSEVASSGVASLDEDEVDQ hide sequence

RefSeq Acc Id:	XP_038944884 ⟸ XM_039088956
- Peptide Label:	isoform X3

RefSeq Acc Id:

ENSRNOP00000065591 ⟸ ENSRNOT00000073526

RefSeq Acc Id:	NP_001408371 ⟸ NM_001421442
- Peptide Label:	isform 1
- UniProtKB:	D4ADK8 (UniProtKB/TrEMBL), A6JS88 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001408372 ⟸ NM_001421443
- Peptide Label:	isoform 2
- UniProtKB:	A6JS87 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063126295 ⟸ XM_063270225
- Peptide Label:	isoform X1
- UniProtKB:	A6JS87 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4ADK8-F1-model_v2	AlphaFold	D4ADK8	1-358	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:2322069	AgrOrtholog
BioCyc Gene	G2FUF-20753	BioCyc
Ensembl Genes	ENSRNOG00000045653	Ensembl
	ENSRNOG00000046177	Ensembl
	ENSRNOG00000063031	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000073526	ENTREZGENE
	ENSRNOT00000073526.3	UniProtKB/TrEMBL
	ENSRNOT00000075606	ENTREZGENE
	ENSRNOT00000075606.3	UniProtKB/TrEMBL
InterPro	FAM131	UniProtKB/TrEMBL
KEGG Report	rno:100360487	UniProtKB/TrEMBL
NCBI Gene	100360487	ENTREZGENE
PANTHER	PROTEIN FAM131A	UniProtKB/TrEMBL
	PTHR15736	UniProtKB/TrEMBL
Pfam	FAM131	UniProtKB/TrEMBL
PhenoGen	Fam131a	PhenoGen
RatGTEx	ENSRNOG00000045653	RatGTEx
	ENSRNOG00000046177	RatGTEx
	ENSRNOG00000063031	RatGTEx
UniProt	A6JS87	ENTREZGENE, UniProtKB/TrEMBL
	A6JS88	ENTREZGENE, UniProtKB/TrEMBL
	D4ADK8	ENTREZGENE, UniProtKB/TrEMBL
	M0RBP4_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-06-02	Fam131a	family with sequence similarity 131, member A	Fam131a	family with sequence similarity 131, member A	Data merged from RGD:149736182	737654	PROVISIONAL
2021-08-09	Fam131a	family with sequence similarity 131, member A			Symbol and Name status set to provisional	45752	PROVISIONAL
2021-03-09	Fam131a	family with sequence similarity 131, member A	LOC100912498	protein FAM131A-like	Data merged from RGD:6486684	737654	PROVISIONAL
2012-08-07	Fam131a	family with sequence similarity 131, member A	LOC100360487	rCG36585-like	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-07-05	LOC100912498	protein FAM131A-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2010-05-06	LOC100360487	rCG36585-like			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar