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ONTOLOGY REPORT - ANNOTATIONS

Term:embryonic morphogenesis
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Accession:GO:0048598 term browser browse the term
Definition:The process in which anatomical structures are generated and organized during the embryonic phase. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants.
Synonyms:exact_synonym: embryonic anatomical structure morphogenesis
 alt_id: GO:0048828


show annotations for term's descendants           Sort by:
embryonic morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15716346) Ensembl
MGI		 PMID:15716346 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15716346) Ensembl
MGI		 PMID:15716346 GO_REF:0000107 NCBI chr 4:34,499,898...34,582,481
Ensembl chr 4:34,517,492...34,578,923 		JBrowse link
G C10H2orf49 chromosome 10 C2orf49 homolog involved_in IEA InterPro GO_REF:0000002 NCBI chr10:38,077,162...38,089,899
Ensembl chr10:38,080,267...38,089,850 		JBrowse link
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17504941) Ensembl
MGI		 PMID:17504941 GO_REF:0000107 NCBI chr 5:8,439,606...8,536,088
Ensembl chr 5:8,446,346...8,533,426 		JBrowse link
G DACT1 dishevelled binding antagonist of beta catenin 1 acts_upstream_of_or_within ISO (PMID:19701191) MGI PMID:19701191 NCBI chr 8:33,950,016...33,959,671
Ensembl chr 8:33,949,926...33,958,449 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within_positive_effect		 IEA
ISO		 (PMID:10926768) Ensembl
MGI		 PMID:10926768 GO_REF:0000107 NCBI chr13:17,172,497...17,457,084
Ensembl chr13:17,172,705...17,456,469 		JBrowse link
G FLRT3 fibronectin leucine rich transmembrane protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:8,354,151...8,367,601
Ensembl chr24:8,364,115...8,366,064 		JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 involved_in ISO (MGI:74275|PMID:7596436) UniProt PMID:7596436 MGI:74275 NCBI chr25:11,231,958...11,410,379
Ensembl chr25:11,231,737...11,407,621 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:17504941) MGI PMID:17504941 NCBI chr 1:72,927,346...72,930,119
Ensembl chr 1:72,927,670...72,928,827 		JBrowse link
G GATA4 GATA binding protein 4 acts_upstream_of_or_within ISO (PMID:9136932)
(PMID:9136933)		 MGI PMID:9136932 PMID:9136933 NCBI chr25:26,126,172...26,211,474
Ensembl chr25:26,127,853...26,182,989 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8387379) Ensembl
MGI		 PMID:8387379 GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G HNF1B HNF1 homeobox B ISO RGD PMID:12860991 RGD:1599302 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993 		JBrowse link
G HTR2B 5-hydroxytryptamine receptor 2B involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr25:43,042,306...43,056,361
Ensembl chr25:43,042,173...43,056,612 		JBrowse link
G MSX1 msh homeobox 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:70,232,790...70,236,295
Ensembl chr 3:70,232,052...70,236,447 		JBrowse link
G MSX2 msh homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:38,002,724...38,007,407
Ensembl chr 4:38,002,428...38,007,407 		JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:66,862,614...67,001,538
Ensembl chr 7:66,862,608...67,142,853 		JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:7,931,786...8,012,484
Ensembl chr17:7,934,739...8,178,707 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16492970), (PMID:17881493) Ensembl
MGI		 PMID:16492970 PMID:17881493 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SHOX2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16141225) Ensembl
MGI		 PMID:16141225 GO_REF:0000107 NCBI chr23:51,484,696...51,492,586
Ensembl chr23:51,484,421...51,492,566 		JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 involved_in ISO (MGI:4453264|PMID:20178780) UniProt PMID:20178780 MGI:4453264 NCBI chr26:6,039,046...6,047,490
Ensembl chr26:6,039,405...6,047,459 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16598713) Ensembl
MGI		 PMID:16598713 GO_REF:0000107 NCBI chr 2:15,300,401...15,481,535
Ensembl chr 2:15,299,723...15,481,495 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:16598713) MGI PMID:16598713 NCBI chr19:46,419,812...46,541,888
Ensembl chr19:46,423,998...46,542,122 		JBrowse link
activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor acts_upstream_of_or_within ISO (PMID:17317769) MGI PMID:17317769 NCBI chr24:34,713,390...34,731,461
NCBI chr  X:51,969,785...52,167,450
Ensembl chr  X:51,969,785...52,151,912 		JBrowse link
anterior neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASP3 caspase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21515572) Ensembl
MGI		 PMID:21515572 GO_REF:0000107 NCBI chr16:45,920,074...45,940,507
Ensembl chr16:45,920,071...45,940,505 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21515572) Ensembl
MGI		 PMID:21515572 GO_REF:0000107 NCBI chr13:3,204,898...3,362,533
Ensembl chr13:3,204,925...3,362,096 		JBrowse link
G LOC609612 folate receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:25,944,350...25,951,010 JBrowse link
G SPECC1L sperm antigen with calponin homology and coiled-coil domains 1 like acts_upstream_of_or_within ISO (PMID:26787558) MGI PMID:26787558 NCBI chr26:27,994,278...28,127,383
Ensembl chr26:28,025,987...28,125,695 		JBrowse link
anterior neuropore closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATAD2A GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (PMID:17565372) MGI PMID:17565372 NCBI chr20:43,736,471...43,853,505
Ensembl chr20:43,739,849...43,846,370 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:8622765) MGI PMID:8622765 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
apoptotic process involved in embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAX BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15967824) Ensembl
MGI		 PMID:15967824 GO_REF:0000107 NCBI chr 1:107,423,388...107,426,464
Ensembl chr 1:107,422,424...107,426,464 		JBrowse link
G BCL2L11 BCL2 like 11 acts_upstream_of_or_within ISO (PMID:15967824) MGI PMID:15967824 NCBI chr17:35,619,804...35,665,782
Ensembl chr17:35,619,582...35,664,587 		JBrowse link
G NOTCH1 notch receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16245338) Ensembl
MGI		 PMID:16245338 GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277 		JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR96 microRNA mir-96 acts_upstream_of_or_within ISO (PMID:19363478) MGI PMID:19363478 NCBI chr14:7,068,754...7,068,842
Ensembl chr14:7,068,754...7,068,842 		JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:20016102) MGI PMID:20016102 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216 		JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr13:37,356,405...37,374,765
Ensembl chr13:37,356,405...37,374,681 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr32:29,671,702...29,766,628
Ensembl chr32:29,671,738...29,772,192 		JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 acts_upstream_of_or_within ISO (PMID:19936227) MGI PMID:19936227 NCBI chr22:37,911,533...37,918,273
Ensembl chr22:37,912,612...37,925,177 		JBrowse link
G WDPCP WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24302887) Ensembl
MGI		 PMID:24302887 GO_REF:0000107 NCBI chr10:62,894,818...63,316,555
Ensembl chr10:62,877,527...63,316,345 		JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD24 ankyrin repeat domain 24 involved_in ISO (MGI:6885507|PMID:35175278) UniProt PMID:35175278 MGI:6885507 NCBI chr20:55,391,381...55,404,538
Ensembl chr20:55,391,652...55,404,544 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:11875276) MGI PMID:11875276 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474 		JBrowse link
G CDH23 cadherin related 23 acts_upstream_of_or_within ISO (PMID:11138008), (PMID:17050716), (PMID:23217710)
(PMID:15537665)
(PMID:7610888), (PMID:8790740), (PMID:9039475)
(PMID:12121736)
(PMID:11322776)		 MGI PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... NCBI chr 4:22,206,972...22,570,875
Ensembl chr 4:22,207,001...22,571,131 		JBrowse link
G CLIC5 chloride intracellular channel 5 acts_upstream_of_or_within ISO (PMID:17021174) MGI PMID:17021174 NCBI chr12:14,160,524...14,318,174
Ensembl chr12:14,144,390...14,318,582 		JBrowse link
G CLRN1 clarin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19414487), (PMID:19423712) Ensembl
MGI		 PMID:19414487 PMID:19423712 GO_REF:0000107 NCBI chr23:45,512,639...45,551,010
Ensembl chr23:45,513,416...45,551,178 		JBrowse link
G CLRN2 clarin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:62,958,242...62,967,878
Ensembl chr 3:62,959,224...62,967,994 		JBrowse link
G GRXCR2 glutaredoxin and cysteine rich domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30380417) Ensembl
MGI		 PMID:30380417 GO_REF:0000107 NCBI chr 2:40,310,285...40,330,200
Ensembl chr 2:40,315,807...40,328,240 		JBrowse link
G LHFPL5 LHFPL tetraspan subfamily member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17876667), (PMID:23217710)
(PMID:15905332)		 Ensembl
MGI		 PMID:15905332 PMID:17876667 PMID:23217710 GO_REF:0000107 NCBI chr12:4,919,732...4,936,823
Ensembl chr12:4,902,832...4,936,413 		JBrowse link
G MYO3A myosin IIIA involved_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chr 2:7,455,125...7,695,483
Ensembl chr 2:7,455,625...7,696,043 		JBrowse link
G MYO3B myosin IIIB involved_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chr36:14,804,662...15,229,597
Ensembl chr36:14,803,514...15,209,820 		JBrowse link
G MYO7A myosin VIIA involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17050716)
(PMID:11753415)
(PMID:12121736)		 Ensembl
MGI		 PMID:11753415 PMID:12121736 PMID:17050716 GO_REF:0000107 NCBI chr21:21,539,735...21,624,063
Ensembl chr21:21,539,785...21,624,279 		JBrowse link
G NHERF1 NHERF family PDZ scaffold protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24920589) Ensembl
MGI		 PMID:24920589 GO_REF:0000107 NCBI chr 9:5,661,792...5,679,783
Ensembl chr 9:5,662,464...5,679,570 		JBrowse link
G PCDH15 protocadherin related 15 acts_upstream_of_or_within ISO (PMID:16887306)
(PMID:10978835)
(PMID:11124469)
(PMID:15537665)
(PMID:23217710)		 MGI PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 NCBI chr26:33,426,728...34,589,208
Ensembl chr26:33,719,839...34,588,017 		JBrowse link
G PDZD7 PDZ domain containing 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24334608) Ensembl
MGI
TreeGrafter		 PMID:24334608 GO_REF:0000107 GO_REF:0000118 NCBI chr28:13,693,032...13,711,654
Ensembl chr28:13,693,023...13,711,784 		JBrowse link
G PLS1 plastin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:38,243,631...38,347,195
Ensembl chr23:38,243,024...38,347,202 		JBrowse link
G REST RE1 silencing transcription factor involved_in ISO (MGI:6193260|PMID:29961578) UniProt PMID:29961578 MGI:6193260 NCBI chr13:49,041,082...49,062,596
Ensembl chr13:49,041,047...49,059,388 		JBrowse link
G RIPOR2 RHO family interacting cell polarization regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:22,823,053...23,041,765
Ensembl chr35:22,824,106...23,041,743 		JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr13:37,356,405...37,374,765
Ensembl chr13:37,356,405...37,374,681 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr32:29,671,702...29,766,628
Ensembl chr32:29,671,738...29,772,192 		JBrowse link
G SOD1 superoxide dismutase 1 acts_upstream_of_or_within ISO (PMID:10464373), (PMID:10466888) MGI PMID:10464373 PMID:10466888 NCBI chr31:26,540,291...26,544,212
Ensembl chr31:26,486,274...26,662,815 		JBrowse link
G STRC stereocilin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30801007)
(PMID:18849963)		 Ensembl
MGI		 PMID:18849963 PMID:30801007 GO_REF:0000107 NCBI chr30:10,444,726...10,459,058
Ensembl chr30:10,444,793...10,460,785 		JBrowse link
G TECTA tectorin alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30801007) Ensembl
MGI		 PMID:30801007 GO_REF:0000107 NCBI chr 5:12,879,963...12,949,211
Ensembl chr 5:12,879,951...12,949,147 		JBrowse link
G TPRN taperin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30380417) Ensembl
MGI
TreeGrafter		 PMID:30380417 GO_REF:0000107 GO_REF:0000118
G TRIOBP TRIO and F-actin binding protein acts_upstream_of_or_within ISO (PMID:20510926) MGI PMID:20510926 NCBI chr10:26,856,981...26,913,330
Ensembl chr10:26,857,678...26,911,083 		JBrowse link
G WHRN whirlin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27117407) Ensembl
MGI
TreeGrafter		 PMID:27117407 GO_REF:0000107 GO_REF:0000118 NCBI chr11:68,617,383...68,699,824
Ensembl chr11:68,617,377...68,699,977 		JBrowse link
axial mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXIN1 axin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9230313) Ensembl
MGI		 PMID:9230313 GO_REF:0000107 NCBI chr 6:40,155,797...40,218,330
Ensembl chr 6:40,158,244...40,218,343 		JBrowse link
G EPHA2 EPH receptor A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11287184) Ensembl
MGI		 PMID:11287184 GO_REF:0000107 NCBI chr 2:81,534,130...81,561,722
Ensembl chr 2:81,534,125...81,561,725 		JBrowse link
axial mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:14511481) MGI PMID:14511481 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151 		JBrowse link
branching involved in labyrinthine layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADM adrenomedullin acts_upstream_of_or_within ISO (PMID:16981008) MGI PMID:16981008 NCBI chr21:33,472,197...33,474,472
Ensembl chr21:33,471,623...33,474,495 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:9435295) UniProt
MGI		 PMID:9435295 GO_REF:0000024 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23610556) Ensembl
MGI		 PMID:23610556 GO_REF:0000107 NCBI chr37:16,123,788...16,126,634
Ensembl chr37:16,123,798...16,125,567 		JBrowse link
G GCM1 glial cells missing transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10888880) Ensembl
MGI		 PMID:10888880 GO_REF:0000107 NCBI chr12:20,623,593...20,642,861
Ensembl chr12:20,623,717...20,640,193 		JBrowse link
G GRB2 growth factor receptor bound protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11369229) Ensembl
MGI		 PMID:11369229 GO_REF:0000107 NCBI chr 9:5,108,128...5,182,091
Ensembl chr 9:5,117,164...5,180,296 		JBrowse link
G IL10 interleukin 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12842419) Ensembl
MGI		 PMID:12842419 GO_REF:0000107 NCBI chr 7:5,933,285...5,937,057
Ensembl chr 7:5,933,285...5,937,057 		JBrowse link
G LLGL2 LLGL scribble cell polarity complex component 2 acts_upstream_of_or_within ISO (PMID:21606200) MGI PMID:21606200 NCBI chr 9:4,975,309...5,008,383
Ensembl chr 9:4,975,660...4,996,775 		JBrowse link
G RSPO3 R-spondin 3 acts_upstream_of_or_within ISO (PMID:16963017) MGI PMID:16963017 NCBI chr 1:65,858,822...65,936,160
Ensembl chr 1:65,858,794...65,936,322 		JBrowse link
G SOCS3 suppressor of cytokine signaling 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11481489) Ensembl
MGI		 PMID:11481489 GO_REF:0000107 NCBI chr 9:2,859,267...2,859,944 JBrowse link
G SPINT1 serine peptidase inhibitor, Kunitz type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17174946) Ensembl
MGI		 PMID:17174946 GO_REF:0000107 NCBI chr30:7,976,094...7,989,019
Ensembl chr30:7,975,235...7,988,339 		JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO (PMID:30236446) MGI PMID:30236446 NCBI chr26:6,039,046...6,047,490
Ensembl chr26:6,039,405...6,047,459 		JBrowse link
cell fate commitment involved in formation of primary germ layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU5F1 POU class 5 homeobox 1 involved_in ISO (PMID:19736317) BHF-UCL PMID:19736317
cell migration involved in gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMOT angiomotin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12676095) Ensembl
MGI		 PMID:12676095 GO_REF:0000107 NCBI chr  X:85,742,610...85,807,557
Ensembl chr  X:85,745,207...85,807,353 		JBrowse link
G CER1 cerberus 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15004567) Ensembl
MGI		 PMID:15004567 GO_REF:0000107 NCBI chr11:35,155,568...35,159,085
Ensembl chr11:35,156,430...35,158,942 		JBrowse link
G LEFTY1 left-right determination factor 1 acts_upstream_of_or_within ISO (PMID:15004567) MGI PMID:15004567 NCBI chr 7:38,932,668...38,934,989 JBrowse link
G LRP5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15142971) Ensembl
MGI		 PMID:15142971 GO_REF:0000107 NCBI chr18:49,439,494...49,555,375
Ensembl chr18:49,439,483...49,516,396 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:15142971) MGI PMID:15142971 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in ISO (PMID:23063620) UniProt PMID:23063620 NCBI chr 1:112,020,344...112,063,120
Ensembl chr 1:112,021,960...112,024,773 		JBrowse link
G MIXL1 Mix paired-like homeobox acts_upstream_of_or_within ISO (PMID:17151016) MGI PMID:17151016 NCBI chr 7:38,651,481...38,652,560 JBrowse link
G NCKAP1 NCK associated protein 1 acts_upstream_of_or_within ISO (PMID:16831833) MGI PMID:16831833 NCBI chr36:25,965,243...26,054,775
Ensembl chr36:25,965,938...26,054,760 		JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:15004567) MGI PMID:15004567 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151 		JBrowse link
G RIC8A RIC8 guanine nucleotide exchange factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21069829) Ensembl
MGI		 PMID:21069829 GO_REF:0000107 NCBI chr18:25,363,031...25,368,645
Ensembl chr18:25,362,875...25,368,378 		JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21146513) Ensembl
MGI		 PMID:21146513 GO_REF:0000107 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124 		JBrowse link
cell migration involved in mesendoderm migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10421635) Ensembl
MGI		 PMID:10421635 GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
cell-cell adhesion involved in gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RIC8A RIC8 guanine nucleotide exchange factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21069829) Ensembl
MGI		 PMID:21069829 GO_REF:0000107 NCBI chr18:25,363,031...25,368,645
Ensembl chr18:25,362,875...25,368,378 		JBrowse link
chorio-allantoic fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP5 bone morphogenetic protein 5 involved_in ISO (MGI:1332253|PMID:10079236) BHF-UCL PMID:10079236 MGI:1332253 NCBI chr12:23,089,429...23,202,176
Ensembl chr12:23,089,459...23,202,348 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653 		JBrowse link
G CCN1 cellular communication network factor 1 acts_upstream_of_or_within ISO (PMID:12446788) MGI PMID:12446788 NCBI chr 6:62,443,285...62,446,246
Ensembl chr 6:62,443,675...62,445,994 		JBrowse link
G DNAJB6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within ISO (PMID:10021343) MGI PMID:10021343 NCBI chr16:19,792,957...19,849,299
Ensembl chr16:19,768,639...19,848,139 		JBrowse link
G ERF ETS2 repressor factor acts_upstream_of_or_within ISO (PMID:17502352) MGI PMID:17502352 NCBI chr 1:112,117,338...112,124,464
Ensembl chr 1:112,117,141...112,124,077 		JBrowse link
G ITGA4 integrin subunit alpha 4 acts_upstream_of_or_within ISO (PMID:7539359) MGI PMID:7539359 NCBI chr36:24,670,464...24,686,719
Ensembl chr36:24,653,408...24,729,057 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10090727) Ensembl
MGI		 PMID:10090727 GO_REF:0000107 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019 		JBrowse link
G VCAM1 vascular cell adhesion molecule 1 acts_upstream_of_or_within ISO (PMID:7539357)
(PMID:7530222)		 MGI PMID:7530222 PMID:7539357 NCBI chr 6:49,341,669...49,359,841
Ensembl chr 6:49,342,151...49,359,933 		JBrowse link
G WNT7B Wnt family member 7B acts_upstream_of_or_within ISO (PMID:11543617) MGI PMID:11543617 NCBI chr10:20,160,916...20,208,786
Ensembl chr10:20,160,206...20,243,160 		JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15226444) Ensembl
MGI		 PMID:15226444 GO_REF:0000107 NCBI chr 8:42,663,287...42,668,665
Ensembl chr 8:42,664,223...42,668,514 		JBrowse link
closure of optic fissure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHACTR4 phosphatase and actin regulator 4 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:71,982,524...72,079,916
Ensembl chr 2:71,984,730...72,080,194 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA Ensembl GO_REF:0000107
cochlea morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTHRC1 collagen triple helix repeat containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18606138) Ensembl
MGI		 PMID:18606138 GO_REF:0000107 NCBI chr13:4,801,049...4,811,565
Ensembl chr13:4,805,577...4,811,282 		JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16116426) Ensembl
MGI		 PMID:16116426 GO_REF:0000107 NCBI chr 5:56,507,803...56,519,382
Ensembl chr 5:56,507,739...56,519,491 		JBrowse link
G DVL2 dishevelled segment polarity protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19008950)
(PMID:16116426)		 Ensembl
MGI		 PMID:16116426 PMID:19008950 GO_REF:0000107 NCBI chr 5:32,194,326...32,201,922
Ensembl chr 5:32,194,313...32,201,857 		JBrowse link
G DVL3 dishevelled segment polarity protein 3 acts_upstream_of_or_within ISO (PMID:19008950) MGI PMID:19008950 NCBI chr34:17,053,534...17,069,965
Ensembl chr34:17,053,343...17,068,389 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10072433) Ensembl
MGI		 PMID:10072433 GO_REF:0000107 NCBI chr29:20,176,306...20,595,131
Ensembl chr29:20,177,014...20,525,653 		JBrowse link
G FRZB frizzled related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17433286) Ensembl
MGI		 PMID:17433286 GO_REF:0000107 NCBI chr36:25,884,557...25,907,436
Ensembl chr36:25,884,557...25,907,369 		JBrowse link
G FZD2 frizzled class receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20940229) Ensembl
MGI		 PMID:20940229 GO_REF:0000107 NCBI chr 9:18,888,711...18,890,549
Ensembl chr 9:18,888,696...18,890,525 		JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17395647) Ensembl
MGI		 PMID:17395647 GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20643356) Ensembl
MGI		 PMID:20643356 GO_REF:0000107 NCBI chr 2:75,290,594...75,324,593
Ensembl chr 2:75,290,596...75,324,496 		JBrowse link
G HOXA1 homeobox A1 involved_in ISO (PMID:16155570) DFLAT PMID:16155570 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G HPN hepsin involved_in ISO (MGI:5306554|PMID:20683358) UniProt PMID:20683358 MGI:5306554 NCBI chr 1:117,486,308...117,503,127
Ensembl chr 1:117,486,340...117,502,583 		JBrowse link
G MYO3A myosin IIIA involved_in ISO (MGI:5766107|PMID:26754646) UniProt PMID:26754646 MGI:5766107 NCBI chr 2:7,455,125...7,695,483
Ensembl chr 2:7,455,625...7,696,043 		JBrowse link
G MYO3B myosin IIIB involved_in ISO (MGI:5766107|PMID:26754646) UniProt PMID:26754646 MGI:5766107 NCBI chr36:14,804,662...15,229,597
Ensembl chr36:14,803,514...15,209,820 		JBrowse link
G NEUROG1 neurogenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:23,563,128...23,564,819
Ensembl chr11:23,563,803...23,564,543 		JBrowse link
G PAX2 paired box 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:84247|PMID:8951055)
(PMID:16916509)
(MGI:4822275|PMID:20727173)		 DFLAT
MGI
UniProt		 PMID:8951055 PMID:16916509 PMID:20727173 MGI:4822275 MGI:84247 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094 		JBrowse link
G POU3F4 POU class 3 homeobox 4 involved_in ISO (MGI:5284768|PMID:18231833) UniProt PMID:18231833 MGI:5284768 NCBI chr  X:64,427,161...64,428,825
Ensembl chr  X:64,427,325...64,428,410 		JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20704721) Ensembl
MGI		 PMID:20704721 GO_REF:0000107 NCBI chr12:11,593,017...11,657,149
Ensembl chr12:11,593,043...11,656,320 		JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:20016102) MGI PMID:20016102 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216 		JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12874121) Ensembl
MGI		 PMID:12874121 GO_REF:0000107 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:20346939) UniProt
MGI
Ensembl		 PMID:20346939 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172 		JBrowse link
G TBX1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:5284768|PMID:18231833)
(PMID:17825816)		 UniProt
MGI		 PMID:17825816 PMID:18231833 MGI:5284768 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784 		JBrowse link
G TBX18 T-box transcription factor 18 acts_upstream_of_or_within ISO (PMID:18353863) MGI PMID:18353863 NCBI chr12:44,901,076...44,929,730
Ensembl chr12:44,873,119...44,929,205 		JBrowse link
G TBX2 T-box transcription factor 2 involved_in ISO (MGI:6710296|PMID:33795231) UniProt PMID:33795231 MGI:6710296 NCBI chr 9:35,237,323...35,245,066
Ensembl chr 9:35,235,649...35,245,736 		JBrowse link
G TIFAB TIFA inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:23,492,317...23,495,825
Ensembl chr11:23,492,867...23,493,352 		JBrowse link
G TSHR thyroid stimulating hormone receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10575115) Ensembl
MGI		 PMID:10575115 GO_REF:0000107 NCBI chr 8:53,327,280...53,482,898
Ensembl chr 8:53,326,655...53,482,898 		JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:20940229)
(PMID:17433286)
(PMID:16116426), (PMID:18606138)
(PMID:20643356)
(PMID:19008950)		 MGI PMID:16116426 PMID:17433286 PMID:18606138 PMID:19008950 PMID:20643356 More... NCBI chr38:21,822,873...21,824,537 JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17433286) Ensembl
MGI		 PMID:17433286 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21980308) Ensembl
MGI		 PMID:21980308 GO_REF:0000107 NCBI chr 2:15,300,401...15,481,535
Ensembl chr 2:15,299,723...15,481,495 		JBrowse link
convergent extension involved in gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:29,662,486...29,703,629
Ensembl chr23:29,645,641...29,703,805 		JBrowse link
convergent extension involved in neural plate elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DVL1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16571627) Ensembl
MGI		 PMID:16571627 GO_REF:0000107 NCBI chr 5:56,507,803...56,519,382
Ensembl chr 5:56,507,739...56,519,491 		JBrowse link
G DVL2 dishevelled segment polarity protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16571627) Ensembl
MGI		 PMID:16571627 GO_REF:0000107 NCBI chr 5:32,194,326...32,201,922
Ensembl chr 5:32,194,313...32,201,857 		JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:16571627)
(PMID:16571627), (PMID:17229766)		 MGI PMID:16571627 PMID:17229766 NCBI chr38:21,822,873...21,824,537 JBrowse link
convergent extension involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SFRP1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18257070) Ensembl
MGI		 PMID:18257070 GO_REF:0000107 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964 		JBrowse link
ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHD7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10932191) Ensembl
MGI		 PMID:10932191 GO_REF:0000107 NCBI chr29:11,115,865...11,284,713
Ensembl chr29:11,156,340...11,283,627 		JBrowse link
G GJB6 gap junction protein beta 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12490528) Ensembl
MGI		 PMID:12490528 GO_REF:0000107 NCBI chr25:17,912,036...17,922,310
Ensembl chr25:17,911,262...17,921,605 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:71,583,118...71,780,986
Ensembl chr 4:71,583,732...71,780,852 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:15190012) MGI PMID:15190012 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784 		JBrowse link
G WDR19 WD repeat domain 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22228095) Ensembl
MGI		 PMID:22228095 GO_REF:0000107 NCBI chr 3:73,115,560...73,213,823
Ensembl chr 3:73,137,250...73,221,512 		JBrowse link
ectoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:10498685) MGI PMID:10498685 NCBI chr24:1,010,370...1,013,791
Ensembl chr24:1,010,651...1,013,072 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10498685) Ensembl
MGI		 PMID:10498685 GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
ectodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELF5 E74 like ETS transcription factor 5 acts_upstream_of_or_within ISO (PMID:25446535) MGI PMID:25446535 NCBI chr18:33,342,962...33,376,012
Ensembl chr18:33,332,324...33,374,828 		JBrowse link
G ETS2 ETS proto-oncogene 2, transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25446535) Ensembl
MGI		 PMID:25446535 GO_REF:0000107 NCBI chr31:33,846,821...33,861,394
Ensembl chr31:33,839,010...33,860,330 		JBrowse link
G POU5F1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:10742100) MGI PMID:10742100
embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16647303)
(PMID:16647304)		 Ensembl
MGI		 PMID:16647303 PMID:16647304 GO_REF:0000107 NCBI chr 5:8,439,606...8,536,088
Ensembl chr 5:8,446,346...8,533,426 		JBrowse link
G FUZ fuzzy planar cell polarity protein involved_in ISO (MGI:4438317|PMID:19767740), (MGI:5296432|PMID:21935430), (MGI:5498583|PMID:23806618) UniProt PMID:19767740 PMID:21935430 PMID:23806618 MGI:4438317 MGI:5296432 MGI:5498583 NCBI chr 1:106,742,381...106,752,543
Ensembl chr 1:106,747,860...106,805,699 		JBrowse link
G GATAD2A GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (PMID:17565372) MGI PMID:17565372 NCBI chr20:43,736,471...43,853,505
Ensembl chr20:43,739,849...43,846,370 		JBrowse link
G GREM2 gremlin 2, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:32,048,151...32,157,698
Ensembl chr 7:32,048,183...32,157,146 		JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISO (MGI:3827087|PMID:19000668) UniProt PMID:19000668 MGI:3827087 NCBI chr20:5,644,002...5,716,702
Ensembl chr20:5,644,089...5,715,906 		JBrowse link
G MAB21L2 mab-21 like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15385160) Ensembl
MGI		 PMID:15385160 GO_REF:0000107 NCBI chr15:48,538,912...48,541,651
Ensembl chr15:48,539,955...48,541,034 		JBrowse link
G NCKAP1 NCK associated protein 1 acts_upstream_of_or_within ISO (PMID:16831833) MGI PMID:16831833 NCBI chr36:25,965,243...26,054,775
Ensembl chr36:25,965,938...26,054,760 		JBrowse link
G OFD1 OFD1 centriole and centriolar satellite protein involved_in ISO (MGI:5498583|PMID:23806618) UniProt PMID:23806618 MGI:5498583 NCBI chr  X:10,140,439...10,194,478
Ensembl chr  X:10,140,067...10,194,472 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:15013802) MGI PMID:15013802 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
G ZNF281 zinc finger protein 281 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,716,575...2,721,524
Ensembl chr 7:2,716,974...2,719,613 		JBrowse link
embryonic camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:37,331,834...37,359,449
Ensembl chr30:37,331,832...37,353,529 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107
embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10049573) Ensembl
MGI		 PMID:10049573 GO_REF:0000107 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18653562) Ensembl
MGI		 PMID:18653562 GO_REF:0000107 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995 		JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (PMID:18056999) MGI PMID:18056999 NCBI chr31:37,307,070...37,310,262
Ensembl chr31:37,307,093...37,310,247 		JBrowse link
G FOXF2 forkhead box F2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:1,841,165...1,846,649
Ensembl chr35:1,841,123...1,846,663 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:16,123,788...16,126,634
Ensembl chr37:16,123,798...16,125,567 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:51,732,079...51,783,534
Ensembl chr17:51,732,016...51,781,063 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:9,066,957...9,256,916
Ensembl chr16:9,066,970...9,244,526 		JBrowse link
G IFT122 intraflagellar transport 122 acts_upstream_of_or_within ISO (PMID:28778798) MGI PMID:28778798 NCBI chr20:5,644,002...5,716,702
Ensembl chr20:5,644,089...5,715,906 		JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28778798) Ensembl
MGI		 PMID:28778798 GO_REF:0000107 NCBI chr17:21,389,462...21,426,970
Ensembl chr17:21,389,482...21,426,796 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859) Ensembl
MGI		 PMID:18582859 GO_REF:0000107 NCBI chr37:25,616,942...25,622,989 JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:18985738)
(PMID:19653321)		 MGI PMID:18985738 PMID:19653321 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18653562) Ensembl
MGI		 PMID:18653562 GO_REF:0000107
G SP1 Sp1 transcription factor acts_upstream_of_or_within ISO (PMID:17584888) MGI PMID:17584888 NCBI chr27:1,802,587...1,861,187
Ensembl chr27:1,805,184...1,847,226 		JBrowse link
G SP3 Sp3 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17584888) Ensembl
MGI		 PMID:17584888 GO_REF:0000107 NCBI chr36:18,023,750...18,086,995
Ensembl chr36:18,024,627...18,077,587 		JBrowse link
G TBX2 T-box transcription factor 2 involved_in ISO (MGI:3487212|PMID:15459098) BHF-UCL PMID:15459098 MGI:3487212 NCBI chr 9:35,237,323...35,245,066
Ensembl chr 9:35,235,649...35,245,736 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:9811866) MGI PMID:9811866 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
G TH tyrosine hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:46,327,136...46,334,973
Ensembl chr18:46,327,137...46,335,602 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18436818) Ensembl
MGI		 PMID:18436818 GO_REF:0000107 NCBI chr 2:15,300,401...15,481,535
Ensembl chr 2:15,299,723...15,481,495 		JBrowse link
embryonic cranial skeleton morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9268572) Ensembl
MGI		 PMID:9268572 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G DLX2 distal-less homeobox 2 acts_upstream_of_or_within ISO (PMID:7590232) MGI PMID:7590232 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510 		JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:1,582,950...1,593,893
Ensembl chr 9:1,582,993...1,593,892 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
G FOXC2 forkhead box C2 acts_upstream_of_or_within ISO (PMID:9106663) MGI PMID:9106663 NCBI chr 5:66,234,336...66,296,007
Ensembl chr 5:66,294,176...66,295,693 		JBrowse link
G FOXC2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:17525797) MGI PMID:17525797 NCBI chr 1:72,927,346...72,930,119
Ensembl chr 1:72,927,670...72,928,827 		JBrowse link
G GNAS GNAS complex locus involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15797856) Ensembl
MGI		 PMID:15797856 GO_REF:0000107 NCBI chr24:43,643,409...43,658,641
Ensembl chr24:43,643,405...43,658,657 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21377456) Ensembl
MGI		 PMID:21377456 GO_REF:0000107 NCBI chr13:3,204,898...3,362,533
Ensembl chr13:3,204,925...3,362,096 		JBrowse link
G IFT140 intraflagellar transport 140 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23469164) Ensembl
MGI		 PMID:23469164 GO_REF:0000107 NCBI chr 6:39,262,887...39,308,912
Ensembl chr 6:39,295,045...39,308,758 		JBrowse link
G IRX5 iroquois homeobox 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:60,957,353...60,978,782
Ensembl chr 2:60,968,193...61,041,385 		JBrowse link
G MMP14 matrix metallopeptidase 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18022611) Ensembl
MGI		 PMID:18022611 GO_REF:0000107 NCBI chr 8:3,183,419...3,193,079
Ensembl chr 8:3,183,606...3,194,122 		JBrowse link
G MMP16 matrix metallopeptidase 16 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18022611) Ensembl
MGI		 PMID:18022611 GO_REF:0000107 NCBI chr29:33,896,133...34,207,560
Ensembl chr29:33,917,907...34,207,466 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19763162) Ensembl
MGI		 PMID:19763162 GO_REF:0000107 NCBI chr 4:71,583,118...71,780,986
Ensembl chr 4:71,583,732...71,780,852 		JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:11311163) MGI PMID:11311163 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151 		JBrowse link
G PAX5 paired box 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23349049) Ensembl
MGI		 PMID:23349049 GO_REF:0000107 NCBI chr11:53,194,905...53,390,204
Ensembl chr11:53,201,344...53,390,974 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:46,729,722...46,775,828
Ensembl chr13:46,730,703...46,773,278 		JBrowse link
G PRRX1 paired related homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9729491)
(PMID:7758948)		 Ensembl
MGI		 PMID:7758948 PMID:9729491 GO_REF:0000107 NCBI chr 7:28,065,570...28,138,734
Ensembl chr 7:28,068,711...28,138,787 		JBrowse link
G PRRX2 paired related homeobox 2 acts_upstream_of_or_within ISO (PMID:9729491) MGI PMID:9729491 NCBI chr 9:54,089,046...54,112,595
Ensembl chr 9:54,093,163...54,096,348 		JBrowse link
G RUNX2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15030764) Ensembl
MGI		 PMID:15030764 GO_REF:0000107 NCBI chr12:13,723,535...13,842,565
Ensembl chr12:13,628,539...13,840,785
Ensembl chr12:13,628,539...13,840,785 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20133625) Ensembl
MGI		 PMID:20133625 GO_REF:0000107 NCBI chr20:41,675,539...41,800,697
Ensembl chr20:41,675,599...41,800,612 		JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:20515681) UniProt
MGI
Ensembl		 PMID:20515681 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534 		JBrowse link
G SIX2 SIX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20515681) Ensembl
MGI		 PMID:20515681 GO_REF:0000107 NCBI chr10:47,399,152...47,403,503
Ensembl chr10:47,400,034...47,403,509 		JBrowse link
G SIX4 SIX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20515681) Ensembl
MGI		 PMID:20515681 GO_REF:0000107 NCBI chr 8:35,735,893...35,748,976
Ensembl chr 8:35,737,058...35,748,893 		JBrowse link
G SLC39A1 solute carrier family 39 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16652366) Ensembl
MGI		 PMID:16652366 GO_REF:0000107 NCBI chr 7:43,171,219...43,174,876
Ensembl chr 7:43,171,287...43,174,036 		JBrowse link
G SLC39A3 solute carrier family 39 member 3 acts_upstream_of_or_within ISO (PMID:16652366) MGI PMID:16652366 NCBI chr20:56,458,318...56,464,099
Ensembl chr20:56,458,035...56,463,922 		JBrowse link
G SMAD2 SMAD family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 NCBI chr 7:43,696,883...43,778,063
Ensembl chr 7:43,700,445...43,769,983 		JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 NCBI chr30:31,246,313...31,360,098
Ensembl chr30:31,245,657...31,363,337 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:15190012) MGI PMID:15190012 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784 		JBrowse link
G TBX15 T-box transcription factor 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728667) Ensembl
MGI		 PMID:15728667 GO_REF:0000107 NCBI chr17:56,079,739...56,190,417
Ensembl chr17:56,081,411...56,204,192 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in
acts_upstream_of_or_within		 ISO (MGI:80519|PMID:8622766)
(PMID:8622765)		 UniProt
MGI		 PMID:8622765 PMID:8622766 MGI:80519 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16806156) Ensembl
MGI		 PMID:16806156 GO_REF:0000107 NCBI chr11:56,191,383...56,223,042
Ensembl chr11:56,161,772...56,218,594 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:13,886,869...13,946,480
Ensembl chr23:13,889,000...13,977,636 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15030764) Ensembl
MGI		 PMID:15030764 GO_REF:0000107
G TWIST2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:15030764) MGI PMID:15030764 NCBI chr25:49,165,450...49,216,545
Ensembl chr25:49,165,641...49,166,123 		JBrowse link
G WDR19 WD repeat domain 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22228095) Ensembl
MGI		 PMID:22228095 GO_REF:0000107 NCBI chr 3:73,115,560...73,213,823
Ensembl chr 3:73,137,250...73,221,512 		JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16054034)
(PMID:16998816)		 Ensembl
MGI		 PMID:16054034 PMID:16998816 GO_REF:0000107 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654 		JBrowse link
embryonic digestive tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15017552)
(PMID:16618415)		 Ensembl
MGI		 PMID:15017552 PMID:16618415 GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:21550054)
(PMID:16618415), (PMID:21492869)		 UniProt
MGI		 PMID:16618415 PMID:21492869 PMID:21550054 GO_REF:0000024 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
G FOXF1 forkhead box F1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:66,343,776...66,347,785
Ensembl chr 5:66,345,150...66,347,935 		JBrowse link
G GATA4 GATA binding protein 4 acts_upstream_of_or_within ISO (PMID:16127717) MGI PMID:16127717 NCBI chr25:26,126,172...26,211,474
Ensembl chr25:26,127,853...26,182,989 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16247775) Ensembl
MGI		 PMID:16247775 GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G HLX H2.0 like homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8557196) Ensembl
MGI		 PMID:8557196 GO_REF:0000107 NCBI chr38:15,538,744...15,543,686
Ensembl chr38:15,539,029...15,542,152 		JBrowse link
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18635606) Ensembl
MGI		 PMID:18635606 GO_REF:0000107 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10821773) Ensembl
MGI		 PMID:10821773 GO_REF:0000107 NCBI chr37:25,616,942...25,622,989 JBrowse link
G LOC102151783 inhibitor of DNA binding 2 involved_in ISO (MGI:4399020|PMID:16888283) UniProt PMID:16888283 MGI:4399020 NCBI chr10:54,954,852...54,957,116 JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:71,583,118...71,780,986
Ensembl chr 4:71,583,732...71,780,852 		JBrowse link
G OVOL2 ovo like zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16423343) Ensembl
MGI		 PMID:16423343 GO_REF:0000107 NCBI chr24:5,020,608...5,050,487
Ensembl chr24:5,020,813...5,050,309 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:46,729,722...46,775,828
Ensembl chr13:46,730,703...46,773,278 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (PMID:21550054) MGI PMID:21550054 NCBI chr32:30,710,161...30,730,162
Ensembl chr32:30,710,685...30,730,273 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10821773) Ensembl
MGI		 PMID:10821773 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SHOX2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16141225) Ensembl
MGI		 PMID:16141225 GO_REF:0000107 NCBI chr23:51,484,696...51,492,586
Ensembl chr23:51,484,421...51,492,566 		JBrowse link
G SIX2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:47,399,152...47,403,503
Ensembl chr10:47,400,034...47,403,509 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA Ensembl GO_REF:0000107
G TCF21 transcription factor 21 ISO RGD PMID:11804032 RGD:727206 NCBI chr 1:26,856,281...26,859,654
Ensembl chr 1:26,856,587...26,859,647 		JBrowse link
G TCF7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:15057272) MGI PMID:15057272 NCBI chr11:22,313,113...22,346,221
Ensembl chr11:22,313,105...22,344,004 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:15057272) MGI PMID:15057272 NCBI chr28:23,966,079...24,162,775
Ensembl chr28:23,966,073...24,163,737 		JBrowse link
embryonic digit morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALX4 ALX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9268572)
(PMID:9272948)		 Ensembl
MGI		 PMID:9268572 PMID:9272948 GO_REF:0000107 NCBI chr18:44,922,042...44,967,557
Ensembl chr18:44,922,150...44,967,550 		JBrowse link
G B9D1 B9 domain containing 1 acts_upstream_of_or_within ISO (PMID:22179047) MGI PMID:22179047 NCBI chr 5:40,854,110...40,866,828
Ensembl chr 5:40,854,127...40,866,824 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9268572) Ensembl
MGI		 PMID:9268572 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20043884) Ensembl
MGI		 PMID:20043884 GO_REF:0000107 NCBI chr 4:34,499,898...34,582,481
Ensembl chr 4:34,517,492...34,578,923 		JBrowse link
G BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18539921) Ensembl
MGI		 PMID:18539921 GO_REF:0000107 NCBI chr29:8,176,977...8,215,561
Ensembl chr29:8,182,508...8,215,868 		JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:24,127,390...24,272,473
Ensembl chr21:24,127,598...24,272,657 		JBrowse link
G CHST11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16079159) Ensembl
MGI		 PMID:16079159 GO_REF:0000107 NCBI chr10:33,555,629...33,810,808
Ensembl chr10:33,555,628...33,810,558 		JBrowse link
G CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25877302) Ensembl
MGI		 PMID:25877302 GO_REF:0000107 NCBI chr 4:71,435,994...71,567,567
Ensembl chr 4:71,430,575...71,567,267 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20043884)
(PMID:12923052)		 Ensembl
MGI		 PMID:12923052 PMID:20043884 GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G ECE1 endothelin converting enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:77,732,645...77,793,950
Ensembl chr 2:77,678,686...77,792,114 		JBrowse link
G FBXW4 F-box and WD repeat domain containing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10471509)
(PMID:9733575)		 Ensembl
MGI		 PMID:9733575 PMID:10471509 GO_REF:0000107 NCBI chr28:14,219,724...14,336,846
Ensembl chr28:14,219,893...14,301,924 		JBrowse link
G FLVCR1 FLVCR choline and heme transporter 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18258918) Ensembl
MGI		 PMID:18258918 GO_REF:0000107 NCBI chr 7:11,001,155...11,038,910
Ensembl chr 7:11,001,101...11,035,980 		JBrowse link
G FREM2 FRAS1 related extracellular matrix 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26234751) Ensembl
MGI		 PMID:26234751 GO_REF:0000107 NCBI chr25:2,097,264...2,264,049
Ensembl chr25:2,102,849...2,264,456 		JBrowse link
G FUZ fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (PMID:19877275)
(PMID:27158779)		 MGI PMID:19877275 PMID:27158779 NCBI chr 1:106,742,381...106,752,543
Ensembl chr 1:106,747,860...106,805,699 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:17504940), (PMID:17504941) MGI PMID:17504940 PMID:17504941 NCBI chr 1:72,927,346...72,930,119
Ensembl chr 1:72,927,670...72,928,827 		JBrowse link
G GJA1 gap junction protein alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19439426) Ensembl
MGI		 PMID:19439426 GO_REF:0000107 NCBI chr 1:60,941,772...60,944,694
Ensembl chr 1:60,929,097...60,942,936 		JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19056373) Ensembl
MGI		 PMID:19056373 GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22841643)
(PMID:17714700)
(PMID:9268572)
(PMID:16254602), (PMID:19036983), (PMID:9268572)		 Ensembl
MGI		 PMID:9268572 PMID:16254602 PMID:17714700 PMID:19036983 PMID:22841643 GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G GNA12 G protein subunit alpha 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12077299) Ensembl
MGI		 PMID:12077299 GO_REF:0000107 NCBI chr 6:14,375,144...14,476,018
Ensembl chr 6:14,413,576...14,473,764 		JBrowse link
G GNAQ G protein subunit alpha q acts_upstream_of_or_within ISO (PMID:12077299) MGI PMID:12077299 NCBI chr 1:80,733,530...80,928,065
Ensembl chr 1:80,715,366...80,928,065 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21377456) Ensembl
MGI		 PMID:21377456 GO_REF:0000107 NCBI chr13:3,204,898...3,362,533
Ensembl chr13:3,204,925...3,362,096 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12070084) Ensembl
MGI		 PMID:12070084 GO_REF:0000107 NCBI chr25:24,140,496...24,143,143
Ensembl chr25:24,141,243...24,152,958 		JBrowse link
G HDAC1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:68,901,339...68,936,473
Ensembl chr 2:68,901,651...68,936,186 		JBrowse link
G HDAC2 histone deacetylase 2 involved_in ISO (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chr12:70,053,822...70,083,491
Ensembl chr12:70,053,297...70,103,578 		JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12869760) Ensembl
MGI		 PMID:12869760 GO_REF:0000107 NCBI chr14:40,355,907...40,360,120
Ensembl chr14:40,357,478...40,359,919 		JBrowse link
G HOXC11 homeobox C11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12869760) Ensembl
MGI		 PMID:12869760 GO_REF:0000107 NCBI chr27:1,287,326...1,289,577
Ensembl chr27:1,287,380...1,289,372 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:12869760)
(PMID:17714700)
(PMID:8900279)		 MGI PMID:8900279 PMID:12869760 PMID:17714700 NCBI chr36:19,913,064...19,926,868
Ensembl chr36:19,914,431...19,916,766 		JBrowse link
G HOXD12 homeobox D12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17714700)
(PMID:8900279)		 Ensembl
MGI		 PMID:8900279 PMID:17714700 GO_REF:0000107 NCBI chr36:19,907,424...19,910,827
Ensembl chr36:19,907,442...19,908,408 		JBrowse link
G HOXD13 homeobox D13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9342042)
(PMID:8900279)
(PMID:17714700)		 Ensembl
MGI		 PMID:8900279 PMID:9342042 PMID:17714700 GO_REF:0000107 NCBI chr36:19,901,184...19,903,837 JBrowse link
G IFT122 intraflagellar transport 122 acts_upstream_of_or_within ISO (PMID:15755804) MGI PMID:15755804 NCBI chr20:5,644,002...5,716,702
Ensembl chr20:5,644,089...5,715,906 		JBrowse link
G IFT140 intraflagellar transport 140 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23469164) Ensembl
MGI		 PMID:23469164 GO_REF:0000107 NCBI chr 6:39,262,887...39,308,912
Ensembl chr 6:39,295,045...39,308,758 		JBrowse link
G IFT52 intraflagellar transport 52 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15930098) Ensembl
MGI		 PMID:15930098 GO_REF:0000107 NCBI chr24:31,295,987...31,334,825
Ensembl chr24:31,296,015...31,334,808 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:19036983)
(PMID:12701101), (PMID:16254602)
(PMID:15755804), (PMID:15930098)
(PMID:15930098)		 MGI PMID:12701101 PMID:15755804 PMID:15930098 PMID:16254602 PMID:19036983 NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20660756) Ensembl
MGI		 PMID:20660756 GO_REF:0000107 NCBI chr37:25,616,942...25,622,989 JBrowse link
G INTU inturned planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25774014) Ensembl
MGI		 PMID:25774014 GO_REF:0000107 NCBI chr19:13,193,252...13,276,593
Ensembl chr19:13,164,245...13,276,496 		JBrowse link
G LMBR1 limb development membrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11606546) Ensembl
MGI		 PMID:11606546 GO_REF:0000107 NCBI chr16:19,295,235...19,442,390
Ensembl chr16:19,296,149...19,442,369 		JBrowse link
G LNPK lunapark, ER junction formation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9342042) Ensembl
MGI		 PMID:9342042 GO_REF:0000107 NCBI chr36:19,731,523...19,809,349
Ensembl chr36:19,732,276...19,808,769 		JBrowse link
G LRP4 LDL receptor related protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16517118) Ensembl
MGI		 PMID:16517118 GO_REF:0000107 NCBI chr18:42,616,683...42,667,297
Ensembl chr18:42,616,426...42,665,794 		JBrowse link
G LRP5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15142971) Ensembl
MGI		 PMID:15142971 GO_REF:0000107 NCBI chr18:49,439,494...49,555,375
Ensembl chr18:49,439,483...49,516,396 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19795512)
(PMID:15142971)		 MGI PMID:15142971 PMID:19795512 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G MAP3K20 mitogen-activated protein kinase kinase kinase 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:17,353,829...17,515,247
Ensembl chr36:17,341,300...17,514,869 		JBrowse link
G MEGF8 multiple EGF like domains 8 acts_upstream_of_or_within ISO (PMID:32203821) MGI PMID:32203821 NCBI chr 1:112,020,344...112,063,120
Ensembl chr 1:112,021,960...112,024,773 		JBrowse link
G MKS1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23454480)
(PMID:19776033)
(PMID:21045211)		 Ensembl
MGI		 PMID:19776033 PMID:21045211 PMID:23454480 GO_REF:0000107 NCBI chr 9:32,865,972...32,878,712
Ensembl chr 9:32,860,995...32,879,338 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21465616) Ensembl
MGI		 PMID:21465616 GO_REF:0000107 NCBI chr 3:70,232,790...70,236,295
Ensembl chr 3:70,232,052...70,236,447 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:21465616) MGI PMID:21465616 NCBI chr 4:38,002,724...38,007,407
Ensembl chr 4:38,002,428...38,007,407 		JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (PMID:17360777) MGI PMID:17360777 NCBI chr17:11,720,857...11,724,308 JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:1,019,167...1,031,622
Ensembl chr13:1,023,879...1,031,225 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:11,327,086...11,437,799
Ensembl chr27:11,426,647...11,437,303 		JBrowse link
G RAB23 RAB23, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:15755804), (PMID:9636176) MGI PMID:9636176 PMID:15755804 NCBI chr12:24,388,530...24,438,956
Ensembl chr12:24,387,643...24,421,869 		JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 acts_upstream_of_or_within ISO (PMID:20660756) MGI PMID:20660756 NCBI chr 1:95,209,122...95,280,956
Ensembl chr 1:95,088,745...95,280,151 		JBrowse link
G SALL1 spalt like transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521 		JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (PMID:18729207) MGI PMID:18729207 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20660756)
(PMID:17504940), (PMID:17504941)
(PMID:15930098)		 Ensembl
MGI		 PMID:15930098 PMID:17504940 PMID:17504941 PMID:20660756 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SMAD4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:23,875,989...23,930,027
Ensembl chr 1:23,882,139...23,969,405 		JBrowse link
G TBC1D32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20159594) Ensembl
MGI		 PMID:20159594 GO_REF:0000107 NCBI chr 1:60,662,704...60,873,881
Ensembl chr 1:60,667,721...60,873,614 		JBrowse link
G TBX2 T-box transcription factor 2 involved_in ISO (MGI:3487212|PMID:15459098) BHF-UCL PMID:15459098 MGI:3487212 NCBI chr 9:35,237,323...35,245,066
Ensembl chr 9:35,235,649...35,245,736 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23844108) Ensembl
MGI		 PMID:23844108 GO_REF:0000107 NCBI chr26:11,694,885...11,709,594
Ensembl chr26:11,696,565...11,708,918 		JBrowse link
G TMEM107 transmembrane protein 107 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,991,000...32,993,319
Ensembl chr 5:32,991,021...32,993,248 		JBrowse link
G TMEM231 transmembrane protein 231 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22179047) Ensembl
MGI		 PMID:22179047 GO_REF:0000107 NCBI chr 5:75,246,043...75,266,705
Ensembl chr 5:75,246,043...75,265,021 		JBrowse link
G TRAF3IP1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO (PMID:21945076) MGI PMID:21945076 NCBI chr25:48,782,448...48,836,993
Ensembl chr25:48,782,463...48,834,374 		JBrowse link
G TTBK2 tau tubulin kinase 2 acts_upstream_of_or_within ISO (PMID:23141541) MGI PMID:23141541 NCBI chr30:9,674,911...9,844,860
Ensembl chr30:9,676,828...9,844,838 		JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:19286674), (PMID:19334287) MGI PMID:19286674 PMID:19334287 NCBI chr27:41,819,574...41,884,198
Ensembl chr27:41,819,455...41,884,097 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15030764) Ensembl
MGI		 PMID:15030764 GO_REF:0000107
G UCP3 uncoupling protein 3 acts_upstream_of_or_within ISO (PMID:19004860) MGI PMID:19004860 NCBI chr21:24,272,522...24,290,304
Ensembl chr21:24,277,896...24,288,639 		JBrowse link
G WDPCP WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24302887) Ensembl
MGI		 PMID:24302887 GO_REF:0000107 NCBI chr10:62,894,818...63,316,555
Ensembl chr10:62,877,527...63,316,345 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19795512) Ensembl
MGI		 PMID:19795512 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
G WNT7A Wnt family member 7A involved_in ISO (PMID:16826533) BHF-UCL PMID:16826533 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 ISO RGD PMID:19191224 RGD:2312786 NCBI chr 5:19,082,594...19,284,360
Ensembl chr 5:19,087,154...19,267,628 		JBrowse link
embryonic ectodermal digestive tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXF1 forkhead box F1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:66,343,776...66,347,785
Ensembl chr 5:66,345,150...66,347,935 		JBrowse link
embryonic epithelial tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RET ret proto-oncogene involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15569713) Ensembl
MGI		 PMID:15569713 GO_REF:0000107 NCBI chr28:3,946,132...3,995,505
Ensembl chr28:3,947,232...3,994,210 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15569713) Ensembl
MGI		 PMID:15569713 GO_REF:0000107 NCBI chr10:16,621,445...16,665,366 JBrowse link
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16546160) Ensembl
MGI		 PMID:16546160 GO_REF:0000107 NCBI chr 2:77,112,045...77,129,702
Ensembl chr 2:77,101,300...77,127,111 		JBrowse link
embryonic eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:16207763), (PMID:16611695) MGI PMID:16207763 PMID:16611695 NCBI chr 1:84,940,411...84,994,789
Ensembl chr 1:84,940,411...84,994,789 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16611695)
(PMID:16207763)
(PMID:16207763), (PMID:16611695)		 Ensembl
MGI		 PMID:16207763 PMID:16611695 GO_REF:0000107 NCBI chr 3:40,130,904...40,168,686
Ensembl chr 3:40,132,726...40,168,664 		JBrowse link
G EFEMP1 EGF containing fibulin extracellular matrix protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:56,632,801...56,694,872
Ensembl chr10:56,579,899...56,787,187 		JBrowse link
G FBN1 fibrillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:14,640,973...14,864,151
Ensembl chr30:14,640,973...14,864,151 		JBrowse link
G FBN2 fibrillin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:17,311,238...17,551,536
Ensembl chr11:17,311,226...17,551,536 		JBrowse link
G FOXL2 forkhead box L2 acts_upstream_of_or_within ISO (PMID:15056605) MGI PMID:15056605 NCBI chr23:35,145,856...35,147,185 JBrowse link
G MFAP2 microfibril associated protein 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:81,217,197...81,223,726
Ensembl chr 2:81,220,431...81,224,243 		JBrowse link
G MFAP5 microfibril associated protein 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:37,028,518...37,042,657
Ensembl chr27:37,028,037...37,040,592 		JBrowse link
G RARB retinoic acid receptor beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16207763) Ensembl
MGI		 PMID:16207763 GO_REF:0000107 NCBI chr23:18,207,253...18,931,128
Ensembl chr23:18,207,760...18,482,652 		JBrowse link
G RARG retinoic acid receptor gamma involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16207763) Ensembl
MGI		 PMID:16207763 GO_REF:0000107 NCBI chr27:1,958,432...1,978,471
Ensembl chr27:1,958,204...1,978,476 		JBrowse link
G VAX2 ventral anterior homeobox 2 acts_upstream_of_or_within ISO (PMID:11830579)
(PMID:10595508)		 MGI PMID:10595508 PMID:11830579 NCBI chr10:69,252,926...69,262,225 JBrowse link
embryonic foregut morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR2B activin A receptor type 2B acts_upstream_of_or_within ISO (PMID:10921901) MGI PMID:10921901 NCBI chr23:8,211,555...8,225,596
Ensembl chr23:8,192,483...8,218,894 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18692041) Ensembl
MGI		 PMID:18692041 GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18794329) Ensembl
MGI		 PMID:18794329 GO_REF:0000107 NCBI chr19:29,916,994...30,063,243
Ensembl chr19:29,921,636...30,063,216 		JBrowse link
G FOXF1 forkhead box F1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11493558) Ensembl
MGI		 PMID:11493558 GO_REF:0000107 NCBI chr 5:66,343,776...66,347,785
Ensembl chr 5:66,345,150...66,347,935 		JBrowse link
G FOXP4 forkhead box P4 acts_upstream_of_or_within ISO (PMID:15361625) MGI PMID:15361625 NCBI chr12:10,239,402...10,292,892
Ensembl chr12:10,258,166...10,291,125 		JBrowse link
G GATA4 GATA binding protein 4 acts_upstream_of_or_within ISO (PMID:9136933)
(PMID:9136932)		 MGI PMID:9136932 PMID:9136933 NCBI chr25:26,126,172...26,211,474
Ensembl chr25:26,127,853...26,182,989 		JBrowse link
G NCKAP1 NCK associated protein 1 acts_upstream_of_or_within ISO (PMID:16831833) MGI PMID:16831833 NCBI chr36:25,965,243...26,054,775
Ensembl chr36:25,965,938...26,054,760 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9731532) Ensembl
MGI		 PMID:9731532 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SMAD2 SMAD family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 NCBI chr 7:43,696,883...43,778,063
Ensembl chr 7:43,700,445...43,769,983 		JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 NCBI chr30:31,246,313...31,360,098
Ensembl chr30:31,245,657...31,363,337 		JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19619492)
(PMID:18462699)		 Ensembl
MGI		 PMID:18462699 PMID:19619492 GO_REF:0000107 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124 		JBrowse link
embryonic forelimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15069081), (PMID:20034106) Ensembl
MGI		 PMID:15069081 PMID:20034106 GO_REF:0000107 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030 		JBrowse link
G ALX3 ALX homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641221) Ensembl
MGI		 PMID:11641221 GO_REF:0000107 NCBI chr 6:41,899,288...41,907,832
Ensembl chr 6:41,903,474...41,906,963 		JBrowse link
G ALX4 ALX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641221) Ensembl
MGI		 PMID:11641221 GO_REF:0000107 NCBI chr18:44,922,042...44,967,557
Ensembl chr18:44,922,150...44,967,550 		JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:15454078) BHF-UCL PMID:15454078 NCBI chr27:44,007,363...44,748,251
Ensembl chr27:44,008,020...44,746,429 		JBrowse link
G CRABP2 cellular retinoic acid binding protein 2 acts_upstream_of_or_within ISO (PMID:7720575) MGI PMID:7720575 NCBI chr 7:41,277,580...41,282,158
Ensembl chr 7:41,277,644...41,281,833 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15371327) Ensembl
MGI		 PMID:15371327 GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G EN1 engrailed homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9362463) Ensembl
MGI		 PMID:9362463 GO_REF:0000107 NCBI chr19:31,124,325...31,129,538 JBrowse link
G GLIPR2 GLI pathogenesis related 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:52,622,460...52,634,602
Ensembl chr11:52,615,039...52,681,270 		JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22916278) Ensembl
MGI		 PMID:22916278 GO_REF:0000107 NCBI chr14:40,355,907...40,360,120
Ensembl chr14:40,357,478...40,359,919 		JBrowse link
G HOXA13 homeobox A13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15733672) Ensembl
MGI		 PMID:15733672 GO_REF:0000107 NCBI chr14:40,371,234...40,375,261
Ensembl chr14:40,373,059...40,375,980 		JBrowse link
G HOXA9 homeobox A9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8625797) Ensembl
MGI		 PMID:8625797 GO_REF:0000107 NCBI chr14:40,336,829...40,340,533
Ensembl chr14:40,337,999...40,339,923 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:22916278) MGI PMID:22916278 NCBI chr36:19,913,064...19,926,868
Ensembl chr36:19,914,431...19,916,766 		JBrowse link
G HOXD9 homeobox D9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8625797) Ensembl
MGI		 PMID:8625797 GO_REF:0000107 NCBI chr36:19,929,479...19,932,861 JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISO (MGI:4888042|PMID:21209331) BHF-UCL PMID:21209331 MGI:4888042 NCBI chr20:5,644,002...5,716,702
Ensembl chr20:5,644,089...5,715,906 		JBrowse link
G LNPK lunapark, ER junction formation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22916278)
(PMID:9342042)		 Ensembl
MGI		 PMID:9342042 PMID:22916278 GO_REF:0000107 NCBI chr36:19,731,523...19,809,349
Ensembl chr36:19,732,276...19,808,769 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:11029008)
(PMID:18256198)
(PMID:19653321)
(PMID:15880584)		 MGI PMID:11029008 PMID:15880584 PMID:18256198 PMID:19653321 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G MECOM MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO (PMID:17029558) MGI PMID:17029558 NCBI chr34:33,747,495...34,299,389
Ensembl chr34:33,748,843...34,299,276 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21465616) Ensembl
MGI		 PMID:21465616 GO_REF:0000107 NCBI chr 3:70,232,790...70,236,295
Ensembl chr 3:70,232,052...70,236,447 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:21465616) MGI PMID:21465616 NCBI chr 4:38,002,724...38,007,407
Ensembl chr 4:38,002,428...38,007,407 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:71,583,118...71,780,986
Ensembl chr 4:71,583,732...71,780,852 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:1,019,167...1,031,622
Ensembl chr13:1,023,879...1,031,225 		JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17473173) Ensembl
MGI		 PMID:17473173 GO_REF:0000107 NCBI chr29:21,886,014...21,912,451
Ensembl chr29:21,885,012...21,911,303 		JBrowse link
G RECK reversion inducing cysteine rich protein with kazal motifs involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23213437) Ensembl
MGI		 PMID:23213437 GO_REF:0000107 NCBI chr11:52,519,303...52,607,753
Ensembl chr11:52,519,317...52,607,217 		JBrowse link
G RPGRIP1L RPGRIP1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17553904) Ensembl
MGI		 PMID:17553904 GO_REF:0000107 NCBI chr 2:62,080,159...62,179,694
Ensembl chr 2:62,080,080...62,178,284 		JBrowse link
G RSPO2 R-spondin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18256198) Ensembl
MGI		 PMID:18256198 GO_REF:0000107 NCBI chr13:8,610,227...8,755,727
Ensembl chr13:8,611,952...8,754,859 		JBrowse link
G RUNX2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22916278) Ensembl
MGI		 PMID:22916278 GO_REF:0000107 NCBI chr12:13,723,535...13,842,565
Ensembl chr12:13,628,539...13,840,785
Ensembl chr12:13,628,539...13,840,785 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11118883), (PMID:11476582) Ensembl
MGI		 PMID:11118883 PMID:11476582 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SHOX2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22916278) Ensembl
MGI		 PMID:22916278 GO_REF:0000107 NCBI chr23:51,484,696...51,492,586
Ensembl chr23:51,484,421...51,492,566 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:11,694,885...11,709,594
Ensembl chr26:11,696,565...11,708,918 		JBrowse link
G TBX5 T-box transcription factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11572777), (PMID:12490567) Ensembl
MGI		 PMID:11572777 PMID:12490567 GO_REF:0000107 NCBI chr26:11,462,541...11,549,699
Ensembl chr26:11,463,653...11,506,446 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISO (MGI:1313057|PMID:9811866) UniProt PMID:9811866 MGI:1313057 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25503409) Ensembl
MGI		 PMID:25503409 GO_REF:0000107 NCBI chr34:21,766,861...21,985,095
Ensembl chr34:21,766,496...21,983,046 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12175489) Ensembl
MGI		 PMID:12175489 GO_REF:0000107
G WNT3 Wnt family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12569130) Ensembl
MGI		 PMID:12569130 GO_REF:0000107 NCBI chr 9:10,073,019...10,124,454
Ensembl chr 9:10,077,567...10,124,508 		JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within
involved_in		 ISO (PMID:9362463)
(PMID:15880584)
(PMID:16826533)		 MGI
BHF-UCL		 PMID:9362463 PMID:15880584 PMID:16826533 MGI:48652 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436 		JBrowse link
G WNT9A Wnt family member 9A acts_upstream_of_or_within ISO (PMID:15371327) MGI PMID:15371327 NCBI chr14:946,843...959,289
Ensembl chr14:953,244...959,295 		JBrowse link
embryonic genitalia morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12004962) Ensembl
MGI		 PMID:12004962 GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192 		JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 acts_upstream_of_or_within ISO (PMID:14745966) MGI PMID:14745966 NCBI chr 1:95,209,122...95,280,956
Ensembl chr 1:95,088,745...95,280,151 		JBrowse link
G TCF7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:15057272) MGI PMID:15057272 NCBI chr11:22,313,113...22,346,221
Ensembl chr11:22,313,105...22,344,004 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:15057272) MGI PMID:15057272 NCBI chr28:23,966,079...24,162,775
Ensembl chr28:23,966,073...24,163,737 		JBrowse link
embryonic heart tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAND1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11076684) Ensembl
MGI		 PMID:11076684 GO_REF:0000107 NCBI chr 4:55,231,061...55,234,640
Ensembl chr 4:55,231,481...55,234,265 		JBrowse link
embryonic heart tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:3,743,257...3,818,659
Ensembl chr36:3,744,163...3,818,652 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107
G MEGF8 multiple EGF like domains 8 involved_in ISO (MGI:5551355|PMID:24052814) UniProt PMID:24052814 MGI:5551355 NCBI chr 1:112,020,344...112,063,120
Ensembl chr 1:112,021,960...112,024,773 		JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,738,333...52,739,962
Ensembl chr 3:52,738,366...52,739,755 		JBrowse link
G RYR2 ryanodine receptor 2 involved_in ISO (MGI:1267127|PMID:9628868) UniProt PMID:9628868 MGI:1267127 NCBI chr 4:2,371,868...2,908,132
Ensembl chr 4:2,373,114...2,907,875 		JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124 		JBrowse link
G TBX20 T-box transcription factor 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:46,891,706...46,946,899
Ensembl chr14:46,896,228...46,947,507 		JBrowse link
G TEAD1 TEA domain transcription factor 1 acts_upstream_of_or_within ISO (PMID:18332127) MGI PMID:18332127 NCBI chr21:35,667,862...35,935,180
Ensembl chr21:35,566,865...35,934,438 		JBrowse link
G TEAD2 TEA domain transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18332127) Ensembl
MGI		 PMID:18332127 GO_REF:0000107 NCBI chr 1:107,115,014...107,130,563
Ensembl chr 1:107,115,094...107,131,038 		JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18332127) Ensembl
MGI		 PMID:18332127 GO_REF:0000107 NCBI chr 5:29,394,760...29,495,977
Ensembl chr 5:29,394,541...29,496,251 		JBrowse link
embryonic hindgut morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DACT1 dishevelled binding antagonist of beta catenin 1 involved_in ISO (MGI:4457465|PMID:20145239) UniProt PMID:20145239 MGI:4457465 NCBI chr 8:33,950,016...33,959,671
Ensembl chr 8:33,949,926...33,958,449 		JBrowse link
G HOXA13 homeobox A13 ISO RGD PMID:17161201 RGD:1599527 NCBI chr14:40,371,234...40,375,261
Ensembl chr14:40,373,059...40,375,980 		JBrowse link
G HOXD13 homeobox D13 ISO RGD PMID:17161201 RGD:1599527 NCBI chr36:19,901,184...19,903,837 JBrowse link
G TCF7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:15057272) MGI PMID:15057272 NCBI chr11:22,313,113...22,346,221
Ensembl chr11:22,313,105...22,344,004 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:15057272) MGI PMID:15057272 NCBI chr28:23,966,079...24,162,775
Ensembl chr28:23,966,073...24,163,737 		JBrowse link
embryonic hindlimb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFF3 ALF transcription elongation factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:42,587,173...43,111,739
Ensembl chr10:42,586,394...43,247,328 		JBrowse link
G ALX3 ALX homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641221) Ensembl
MGI		 PMID:11641221 GO_REF:0000107 NCBI chr 6:41,899,288...41,907,832
Ensembl chr 6:41,903,474...41,906,963 		JBrowse link
G ALX4 ALX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641221) Ensembl
MGI		 PMID:11641221 GO_REF:0000107 NCBI chr18:44,922,042...44,967,557
Ensembl chr18:44,922,150...44,967,550 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10964473) Ensembl
MGI		 PMID:10964473 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16207732) Ensembl
MGI		 PMID:16207732 GO_REF:0000107 NCBI chr29:11,115,865...11,284,713
Ensembl chr29:11,156,340...11,283,627 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18231602)
(PMID:12923052)		 Ensembl
MGI		 PMID:12923052 PMID:18231602 GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:16319892) MGI PMID:16319892 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879 		JBrowse link
G FGF4 fibroblast growth factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16245339) Ensembl
MGI		 PMID:16245339 GO_REF:0000107 NCBI chr18:48,413,480...48,417,494
Ensembl chr18:48,413,187...48,416,977 		JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16245339) Ensembl
MGI		 PMID:16245339 GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G GNAS GNAS complex locus involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15797856) Ensembl
MGI		 PMID:15797856 GO_REF:0000107 NCBI chr24:43,643,409...43,658,641
Ensembl chr24:43,643,405...43,658,657 		JBrowse link
G GPC3 glypican 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10964473) Ensembl
MGI		 PMID:10964473 GO_REF:0000107 NCBI chr  X:104,313,426...104,751,215
Ensembl chr  X:104,313,591...104,751,756 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:15880584)
(PMID:18256198)
(PMID:19653321)		 MGI PMID:15880584 PMID:18256198 PMID:19653321 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G MECOM MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO (PMID:17029558) MGI PMID:17029558 NCBI chr34:33,747,495...34,299,389
Ensembl chr34:33,748,843...34,299,276 		JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14500757) Ensembl
MGI		 PMID:14500757 GO_REF:0000107 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349 		JBrowse link
G MMP13 matrix metallopeptidase 13 ISO RGD PMID:11850435 RGD:1582550 NCBI chr 5:28,793,568...28,864,832
Ensembl chr 5:28,850,522...28,864,121 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21465616) Ensembl
MGI		 PMID:21465616 GO_REF:0000107 NCBI chr 3:70,232,790...70,236,295
Ensembl chr 3:70,232,052...70,236,447 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:21465616) MGI PMID:21465616 NCBI chr 4:38,002,724...38,007,407
Ensembl chr 4:38,002,428...38,007,407 		JBrowse link
G NOTCH1 notch receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16245338) Ensembl
MGI		 PMID:16245338 GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:1,019,167...1,031,622
Ensembl chr13:1,023,879...1,031,225 		JBrowse link
G PITX1 paired like homeodomain 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:5299938|PMID:22071103)
(PMID:18231602)		 CACAO
MGI		 PMID:18231602 PMID:22071103 MGI:5299938 NCBI chr11:23,069,731...23,075,085
Ensembl chr11:23,069,716...23,080,941 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (PMID:18231602) MGI PMID:18231602 NCBI chr32:30,710,161...30,730,162
Ensembl chr32:30,710,685...30,730,273 		JBrowse link
G RARB retinoic acid receptor beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10075839) Ensembl
MGI		 PMID:10075839 GO_REF:0000107 NCBI chr23:18,207,253...18,931,128
Ensembl chr23:18,207,760...18,482,652 		JBrowse link
G RARG retinoic acid receptor gamma involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10075839) Ensembl
MGI		 PMID:10075839 GO_REF:0000107 NCBI chr27:1,958,432...1,978,471
Ensembl chr27:1,958,204...1,978,476 		JBrowse link
G RPGRIP1L RPGRIP1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17553904) Ensembl
MGI		 PMID:17553904 GO_REF:0000107 NCBI chr 2:62,080,159...62,179,694
Ensembl chr 2:62,080,080...62,178,284 		JBrowse link
G RSPO2 R-spondin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18256198) Ensembl
MGI		 PMID:18256198 GO_REF:0000107 NCBI chr13:8,610,227...8,755,727
Ensembl chr13:8,611,952...8,754,859 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11118883) Ensembl
MGI		 PMID:11118883 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (PMID:16192310) MGI PMID:16192310 NCBI chr20:50,175,489...50,268,865
Ensembl chr20:50,175,687...50,268,836 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23844108) Ensembl
MGI		 PMID:23844108 GO_REF:0000107 NCBI chr26:11,694,885...11,709,594
Ensembl chr26:11,696,565...11,708,918 		JBrowse link
G TBX4 T-box transcription factor 4 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:35,163,346...35,197,726
Ensembl chr 9:35,166,353...35,191,932 		JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25503409) Ensembl
MGI		 PMID:25503409 GO_REF:0000107 NCBI chr34:21,766,861...21,985,095
Ensembl chr34:21,766,496...21,983,046 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107
G WNT3 Wnt family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12569130) Ensembl
MGI		 PMID:12569130 GO_REF:0000107 NCBI chr 9:10,073,019...10,124,454
Ensembl chr 9:10,077,567...10,124,508 		JBrowse link
G WNT7A Wnt family member 7A involved_in
acts_upstream_of_or_within		 ISO (PMID:16826533)
(PMID:15880584)		 BHF-UCL
MGI		 PMID:15880584 PMID:16826533 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10835630) RGD
MGI
Ensembl		 PMID:10835630 PMID:19191224 GO_REF:0000107 RGD:2312786 NCBI chr 5:19,082,594...19,284,360
Ensembl chr 5:19,087,154...19,267,628 		JBrowse link
embryonic limb morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACD ACD shelterin complex subunit and telomerase recruitment factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15537664) Ensembl
MGI		 PMID:15537664 GO_REF:0000107 NCBI chr 5:81,789,915...81,792,725
Ensembl chr 5:81,789,997...81,792,639 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14623241) Ensembl
MGI		 PMID:14623241 GO_REF:0000107 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030 		JBrowse link
G ALX1 ALX homeobox 1 acts_upstream_of_or_within ISO (PMID:9847249) MGI PMID:9847249 NCBI chr15:26,838,615...26,858,786
Ensembl chr15:26,834,670...26,858,803 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9664686) Ensembl
MGI		 PMID:9664686 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9664686) Ensembl
MGI		 PMID:9664686 GO_REF:0000107 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653 		JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:24,127,390...24,272,473
Ensembl chr21:24,127,598...24,272,657 		JBrowse link
G CHST11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16079159) Ensembl
MGI		 PMID:16079159 GO_REF:0000107 NCBI chr10:33,555,629...33,810,808
Ensembl chr10:33,555,628...33,810,558 		JBrowse link
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15030763) Ensembl
MGI		 PMID:15030763 GO_REF:0000107 NCBI chr17:50,633,397...50,653,882
Ensembl chr17:50,633,413...50,653,894 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:16040801) MGI PMID:16040801 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879 		JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (PMID:15242796) MGI PMID:15242796 NCBI chr26:35,697,428...35,701,596
Ensembl chr26:35,697,618...35,701,496 		JBrowse link
G DLX5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18326838)
(PMID:12112878)		 Ensembl
MGI		 PMID:12112878 PMID:18326838 GO_REF:0000107 NCBI chr14:22,080,351...22,085,188
Ensembl chr14:22,080,699...22,084,867 		JBrowse link
G DLX6 distal-less homeobox 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18326838)
(PMID:12112878)		 Ensembl
MGI		 PMID:12112878 PMID:18326838 GO_REF:0000107 NCBI chr14:22,067,253...22,086,284
Ensembl chr14:22,067,149...22,220,799 		JBrowse link
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within ISO (PMID:16229832) MGI PMID:16229832 NCBI chr 5:28,566,604...28,727,416
Ensembl chr 5:28,388,664...28,727,334 		JBrowse link
G EN1 engrailed homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15242796)
(PMID:8684466)		 Ensembl
MGI		 PMID:8684466 PMID:15242796 GO_REF:0000107 NCBI chr19:31,124,325...31,129,538 JBrowse link
G FBN2 fibrillin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11285249)
(PMID:11350121)		 Ensembl
MGI		 PMID:11285249 PMID:11350121 GO_REF:0000107 NCBI chr11:17,311,238...17,551,536
Ensembl chr11:17,311,226...17,551,536 		JBrowse link
G FGF4 fibroblast growth factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15328019) Ensembl
MGI		 PMID:15328019 GO_REF:0000107 NCBI chr18:48,413,480...48,417,494
Ensembl chr18:48,413,187...48,416,977 		JBrowse link
G FGF9 fibroblast growth factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17576930) Ensembl
MGI		 PMID:17576930 GO_REF:0000107 NCBI chr25:16,630,321...16,665,935
Ensembl chr25:16,632,812...16,663,550 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16207751) Ensembl
MGI		 PMID:16207751 GO_REF:0000107 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
G FRAS1 Fraser extracellular matrix complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23469164) Ensembl
MGI		 PMID:23469164 GO_REF:0000107 NCBI chr32:2,558,442...2,993,199
Ensembl chr32:2,558,354...2,991,063 		JBrowse link
G GDF5 growth differentiation factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15542031) Ensembl
MGI		 PMID:15542031 GO_REF:0000107 NCBI chr24:24,395,699...24,400,302
Ensembl chr24:24,395,263...24,399,928 		JBrowse link
G GJA5 gap junction protein alpha 5 acts_upstream_of_or_within ISO (PMID:15923624) MGI PMID:15923624 NCBI chr17:58,289,327...58,305,315
Ensembl chr17:58,289,327...58,305,315 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19422820)
(PMID:16284117)
(PMID:12142027), (PMID:12435361), (PMID:12435627), (PMID:19809516), (PMID:8387379)		 Ensembl
MGI		 PMID:8387379 PMID:12142027 PMID:12435361 PMID:12435627 PMID:16284117 More... GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12808456) Ensembl
MGI		 PMID:12808456 GO_REF:0000107 NCBI chr30:2,219,535...2,231,868
Ensembl chr30:2,222,898...2,225,418 		JBrowse link
G HNF1A HNF1 homeobox A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10090727) Ensembl
MGI		 PMID:10090727 GO_REF:0000107 NCBI chr26:16,805,690...16,826,065
Ensembl chr26:16,805,690...16,824,790 		JBrowse link
G HOXA10 homeobox A10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12869760) Ensembl
MGI		 PMID:12869760 GO_REF:0000107 NCBI chr14:40,346,462...40,348,900
Ensembl chr14:40,346,462...40,354,396 		JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14668414) Ensembl
MGI		 PMID:14668414 GO_REF:0000107 NCBI chr14:40,355,907...40,360,120
Ensembl chr14:40,357,478...40,359,919 		JBrowse link
G HOXC10 homeobox C10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12869760) Ensembl
MGI		 PMID:12869760 GO_REF:0000107 NCBI chr27:1,272,272...1,277,411
Ensembl chr27:1,273,131...1,323,370 		JBrowse link
G HOXD10 homeobox D10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12869760) Ensembl
MGI		 PMID:12869760 GO_REF:0000107 NCBI chr36:19,924,352...19,927,706
Ensembl chr36:19,916,175...19,927,724 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:14668414) MGI PMID:14668414 NCBI chr36:19,913,064...19,926,868
Ensembl chr36:19,914,431...19,916,766 		JBrowse link
G HOXD13 homeobox D13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11850178) Ensembl
MGI		 PMID:11850178 GO_REF:0000107 NCBI chr36:19,901,184...19,903,837 JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10090727) Ensembl
MGI		 PMID:10090727 GO_REF:0000107 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019 		JBrowse link
G LRP4 LDL receptor related protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17119023)
(PMID:16207730)		 Ensembl
MGI		 PMID:16207730 PMID:17119023 GO_REF:0000107 NCBI chr18:42,616,683...42,667,297
Ensembl chr18:42,616,426...42,665,794 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:20359476) MGI PMID:20359476 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G MBNL1 muscleblind like splicing regulator 1 involved_in ISO (MGI:2675975|PMID:12915312) UniProt PMID:12915312 MGI:2675975 NCBI chr23:46,697,755...46,941,300
Ensembl chr23:46,737,790...46,938,233 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in ISO (MGI:5551355|PMID:24052814) UniProt PMID:24052814 MGI:5551355 NCBI chr 1:112,020,344...112,063,120
Ensembl chr 1:112,021,960...112,024,773 		JBrowse link
G MOSMO modulator of smoothened acts_upstream_of_or_within ISO (PMID:34486668) MGI PMID:34486668 NCBI chr 6:23,544,759...23,607,810
Ensembl chr 6:23,542,527...23,607,801 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19422820)
(PMID:15930102)		 Ensembl
MGI		 PMID:15930102 PMID:19422820 GO_REF:0000107 NCBI chr 3:70,232,790...70,236,295
Ensembl chr 3:70,232,052...70,236,447 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:19422820)
(PMID:15930102)		 MGI PMID:15930102 PMID:19422820 NCBI chr 4:38,002,724...38,007,407
Ensembl chr 4:38,002,428...38,007,407 		JBrowse link
G MUSTN1 musculoskeletal, embryonic nuclear protein 1 ISO RGD PMID:14718386 RGD:1302424
G NOTCH1 notch receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16169548) Ensembl
MGI		 PMID:16169548 GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277 		JBrowse link
G NOTCH2 notch receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16169548) Ensembl
MGI		 PMID:16169548 GO_REF:0000107 NCBI chr17:56,854,825...57,020,157
Ensembl chr17:56,860,429...57,020,857 		JBrowse link
G PBX1 PBX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16672333) Ensembl
MGI		 PMID:16672333 GO_REF:0000107 NCBI chr38:18,378,997...18,703,694
Ensembl chr38:18,418,093...18,703,497 		JBrowse link
G PBX2 PBX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16672333) Ensembl
MGI		 PMID:16672333 GO_REF:0000107 NCBI chr12:1,577,639...1,582,609
Ensembl chr12:1,578,707...1,584,688 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:11,327,086...11,437,799
Ensembl chr27:11,426,647...11,437,303 		JBrowse link
G PRRX1 paired related homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9729491), (PMID:9882503) Ensembl
MGI		 PMID:9729491 PMID:9882503 GO_REF:0000107 NCBI chr 7:28,065,570...28,138,734
Ensembl chr 7:28,068,711...28,138,787 		JBrowse link
G PRRX2 paired related homeobox 2 acts_upstream_of_or_within ISO (PMID:9729491), (PMID:9882503) MGI PMID:9729491 PMID:9882503 NCBI chr 9:54,089,046...54,112,595
Ensembl chr 9:54,093,163...54,096,348 		JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16169548) Ensembl
MGI		 PMID:16169548 GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532 		JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (PMID:16169548) MGI PMID:16169548 NCBI chr 7:38,147,157...38,163,023
Ensembl chr 7:38,147,173...38,166,722 		JBrowse link
G PTCH1 patched 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11389830)
(PMID:11784021)		 Ensembl
MGI		 PMID:11389830 PMID:11784021 GO_REF:0000107 NCBI chr 1:71,246,750...71,309,036
Ensembl chr 1:71,238,195...71,305,662 		JBrowse link
G SALL4 spalt like transcription factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16380715) Ensembl
MGI		 PMID:16380715 GO_REF:0000107 NCBI chr24:37,941,498...37,959,713
Ensembl chr24:37,940,034...38,037,287 		JBrowse link
G SDHAF3 succinate dehydrogenase complex assembly factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:22,153,377...22,221,918 JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19422820)
(PMID:11389830)
(PMID:15315763)		 Ensembl
MGI		 PMID:11389830 PMID:15315763 PMID:19422820 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SHOX2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16537395)
(PMID:17481601)		 Ensembl
MGI		 PMID:16537395 PMID:17481601 GO_REF:0000107 NCBI chr23:51,484,696...51,492,586
Ensembl chr23:51,484,421...51,492,566 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:12435627) MGI PMID:12435627 NCBI chr 5:57,144,178...57,216,385
Ensembl chr 5:57,145,825...57,214,403 		JBrowse link
G SP8 Sp8 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14597661) Ensembl
MGI		 PMID:14597661 GO_REF:0000107 NCBI chr14:34,786,296...34,791,495 JBrowse link
G SP9 Sp9 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:18,401,003...18,404,874
Ensembl chr36:18,400,918...18,403,135 		JBrowse link
G TBX4 T-box transcription factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12736212) Ensembl
MGI		 PMID:12736212 GO_REF:0000107 NCBI chr 9:35,163,346...35,197,726
Ensembl chr 9:35,166,353...35,191,932 		JBrowse link
G TBX5 T-box transcription factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12736217)
(PMID:16380715)		 Ensembl
MGI		 PMID:12736217 PMID:16380715 GO_REF:0000107 NCBI chr26:11,462,541...11,549,699
Ensembl chr26:11,463,653...11,506,446 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISO (MGI:894212|PMID:9217007) BHF-UCL PMID:9217007 MGI:894212 NCBI chr38:13,430,832...13,511,655
Ensembl chr38:13,429,148...13,510,242 		JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10227293)
(PMID:18326838)		 Ensembl
MGI		 PMID:10227293 PMID:18326838 GO_REF:0000107 NCBI chr34:21,766,861...21,985,095
Ensembl chr34:21,766,496...21,983,046 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11350121)
(PMID:12142027)
(PMID:15030764)		 Ensembl
MGI		 PMID:11350121 PMID:12142027 PMID:15030764 GO_REF:0000107
G UCP3 uncoupling protein 3 acts_upstream_of_or_within ISO (PMID:19004860) MGI PMID:19004860 NCBI chr21:24,272,522...24,290,304
Ensembl chr21:24,277,896...24,288,639 		JBrowse link
G WDR19 WD repeat domain 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22228095) Ensembl
MGI		 PMID:22228095 GO_REF:0000107 NCBI chr 3:73,115,560...73,213,823
Ensembl chr 3:73,137,250...73,221,512 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10021340) Ensembl
MGI		 PMID:10021340 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within ISO (PMID:15242796) MGI PMID:15242796 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO MGI MGI:61278 NCBI chr 5:19,082,594...19,284,360
Ensembl chr 5:19,087,154...19,267,628 		JBrowse link
embryonic nail plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD6 frizzled class receptor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23439395) Ensembl
MGI		 PMID:23439395 GO_REF:0000107 NCBI chr13:4,732,541...4,771,294
Ensembl chr13:4,733,017...4,772,115 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21465616) Ensembl
MGI		 PMID:21465616 GO_REF:0000107 NCBI chr 3:70,232,790...70,236,295
Ensembl chr 3:70,232,052...70,236,447 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:21465616) MGI PMID:21465616 NCBI chr 4:38,002,724...38,007,407
Ensembl chr 4:38,002,428...38,007,407 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:11,327,086...11,437,799
Ensembl chr27:11,426,647...11,437,303 		JBrowse link
embryonic neurocranium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27395007) Ensembl
MGI		 PMID:27395007 GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G FUZ fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (PMID:27395007) MGI PMID:27395007 NCBI chr 1:106,742,381...106,752,543
Ensembl chr 1:106,747,860...106,805,699 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27395007) Ensembl
MGI		 PMID:27395007 GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G HOXA1 homeobox A1 involved_in ISO (PMID:16155570) DFLAT PMID:16155570 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G MED12 mediator complex subunit 12 acts_upstream_of_or_within ISO (PMID:20589884) MGI PMID:20589884 NCBI chr  X:55,487,629...55,508,941
Ensembl chr  X:55,482,013...55,509,992 		JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:41,316,247...41,495,226
Ensembl chr 1:41,309,419...41,495,216 		JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16020517) Ensembl
MGI		 PMID:16020517 GO_REF:0000107 NCBI chr 4:58,580,231...58,639,750
Ensembl chr 4:58,532,148...58,640,191 		JBrowse link
G TGFB2 transforming growth factor beta 2 ISO RGD PMID:11002343 RGD:1579866 NCBI chr38:13,430,832...13,511,655
Ensembl chr38:13,429,148...13,510,242 		JBrowse link
G TGFB3 transforming growth factor beta 3 ISO RGD PMID:11002343 RGD:1579866 NCBI chr 8:48,920,874...48,946,037
Ensembl chr 8:48,923,423...48,945,816 		JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:19286674) MGI PMID:19286674 NCBI chr27:41,819,574...41,884,198
Ensembl chr27:41,819,455...41,884,097 		JBrowse link
embryonic organ morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:15843416) UniProt
MGI		 PMID:15843416 GO_REF:0000024 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
G FOXE1 forkhead box E1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9697704) Ensembl
MGI		 PMID:9697704 GO_REF:0000107 NCBI chr11:55,143,389...55,145,954 JBrowse link
G HOXC4 homeobox C4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8660891) Ensembl
MGI		 PMID:8660891 GO_REF:0000107 NCBI chr27:1,209,510...1,246,873
Ensembl chr27:1,172,229...1,226,572 		JBrowse link
G NEUROD1 neuronal differentiation 1 involved_in ISO (MGI:1096974|PMID:9308961) BHF-UCL PMID:9308961 MGI:1096974 NCBI chr36:24,853,591...24,857,886 JBrowse link
G RBP4 retinol binding protein 4 involved_in ISO (MGI:3604178|PMID:15994349) BHF-UCL PMID:15994349 MGI:3604178 NCBI chr28:7,822,936...7,830,735
Ensembl chr28:7,822,944...7,830,750 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (PMID:16287714) MGI PMID:16287714 NCBI chr20:50,175,489...50,268,865
Ensembl chr20:50,175,687...50,268,836 		JBrowse link
embryonic placenta morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN1C cyclin dependent kinase inhibitor 1C acts_upstream_of_or_within ISO (PMID:19276117) MGI PMID:19276117 NCBI chr18:46,860,636...46,861,697 JBrowse link
G IGF2 insulin like growth factor 2 involved_in ISO (MGI:5908476|PMID:28522536) UniProt PMID:28522536 MGI:5908476 NCBI chr18:46,294,036...46,311,982
Ensembl chr18:46,294,019...46,311,982 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20133625) Ensembl
MGI		 PMID:20133625 GO_REF:0000107 NCBI chr20:41,675,539...41,800,697
Ensembl chr20:41,675,599...41,800,612 		JBrowse link
G TRIM28 tripartite motif containing 28 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22110054) Ensembl
MGI		 PMID:22110054 GO_REF:0000107 NCBI chr 1:99,408,920...99,415,432
Ensembl chr 1:99,408,925...99,415,146 		JBrowse link
G VCAM1 vascular cell adhesion molecule 1 acts_upstream_of_or_within ISO (PMID:7530222) MGI PMID:7530222 NCBI chr 6:49,341,669...49,359,841
Ensembl chr 6:49,342,151...49,359,933 		JBrowse link
G WNT7B Wnt family member 7B acts_upstream_of_or_within ISO (PMID:11543617) MGI PMID:11543617 NCBI chr10:20,160,916...20,208,786
Ensembl chr10:20,160,206...20,243,160 		JBrowse link
embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19754878) Ensembl
MGI		 PMID:19754878 GO_REF:0000107 NCBI chr 5:8,439,606...8,536,088
Ensembl chr 5:8,446,346...8,533,426 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:51,732,079...51,783,534
Ensembl chr17:51,732,016...51,781,063 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:9,066,957...9,256,916
Ensembl chr16:9,066,970...9,244,526 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19653321) MGI PMID:19653321 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
G RBP4 retinol binding protein 4 involved_in ISO (MGI:1344892|PMID:10469643) BHF-UCL PMID:10469643 MGI:1344892 NCBI chr28:7,822,936...7,830,735
Ensembl chr28:7,822,944...7,830,750 		JBrowse link
embryonic skeletal joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXIN1 axin 1 acts_upstream_of_or_within ISO MGI MGI:48782 NCBI chr 6:40,155,797...40,218,330
Ensembl chr 6:40,158,244...40,218,343 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9664686) Ensembl
MGI		 PMID:9664686 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9664686) Ensembl
MGI		 PMID:9664686 GO_REF:0000107 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653 		JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:6,756,994...6,787,733
Ensembl chr27:6,756,994...6,787,733 		JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20978074) Ensembl
MGI		 PMID:20978074 GO_REF:0000107 NCBI chr14:40,355,907...40,360,120
Ensembl chr14:40,357,478...40,359,919 		JBrowse link
G HOXC11 homeobox C11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20978074) Ensembl
MGI		 PMID:20978074 GO_REF:0000107 NCBI chr27:1,287,326...1,289,577
Ensembl chr27:1,287,380...1,289,372 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:20978074) MGI PMID:20978074 NCBI chr36:19,913,064...19,926,868
Ensembl chr36:19,914,431...19,916,766 		JBrowse link
G HYAL1 hyaluronidase 1 acts_upstream_of_or_within ISO (PMID:18772348) MGI PMID:18772348 NCBI chr20:39,035,924...39,040,443
Ensembl chr20:39,038,514...39,040,368 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:1,019,167...1,031,622
Ensembl chr13:1,023,879...1,031,225 		JBrowse link
G SHOX2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18514492) Ensembl
MGI		 PMID:18514492 GO_REF:0000107 NCBI chr23:51,484,696...51,492,586
Ensembl chr23:51,484,421...51,492,566 		JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:1,019,167...1,031,622
Ensembl chr13:1,023,879...1,031,225 		JBrowse link
embryonic skeletal system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALX1 ALX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728667), (PMID:9847249) TreeGrafter
MGI		 PMID:9847249 PMID:15728667 GO_REF:0000118 NCBI chr15:26,838,615...26,858,786
Ensembl chr15:26,834,670...26,858,803 		JBrowse link
G ALX3 ALX homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641221), (PMID:15728667) Ensembl
MGI		 PMID:11641221 PMID:15728667 GO_REF:0000107 NCBI chr 6:41,899,288...41,907,832
Ensembl chr 6:41,903,474...41,906,963 		JBrowse link
G ALX4 ALX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9847249)
(PMID:11641221)
(PMID:15728667)		 Ensembl
MGI		 PMID:9847249 PMID:11641221 PMID:15728667 GO_REF:0000107 NCBI chr18:44,922,042...44,967,557
Ensembl chr18:44,922,150...44,967,550 		JBrowse link
G ASXL2 ASXL transcriptional regulator 2 acts_upstream_of_or_within ISO (PMID:19270745) MGI PMID:19270745 NCBI chr17:19,914,026...20,065,141
Ensembl chr17:19,895,568...20,044,691 		JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11290297) Ensembl
MGI		 PMID:11290297 GO_REF:0000107 NCBI chr 2:10,818,232...10,828,473
Ensembl chr 2:10,818,232...10,833,613 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16712836) Ensembl
MGI		 PMID:16712836 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G CHST11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16079159) Ensembl
MGI		 PMID:16079159 GO_REF:0000107 NCBI chr10:33,555,629...33,810,808
Ensembl chr10:33,555,628...33,810,558 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:4100752) Ensembl
MGI		 PMID:4100752 GO_REF:0000107 NCBI chr 6:47,425,387...47,622,189
Ensembl chr 6:47,425,307...47,621,012 		JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11238884) Ensembl
MGI		 PMID:11238884 GO_REF:0000107 NCBI chr33:30,016,323...30,253,180
Ensembl chr33:30,016,600...30,253,547 		JBrowse link
G DSCAML1 DS cell adhesion molecule like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,839,504...16,187,465
Ensembl chr 5:15,826,726...16,186,880 		JBrowse link
G DYNC2I1 dynein 2 intermediate chain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:20,810,735...20,859,441
Ensembl chr16:20,810,345...20,859,037 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10471511) Ensembl
MGI		 PMID:10471511 GO_REF:0000107 NCBI chr29:20,176,306...20,595,131
Ensembl chr29:20,177,014...20,525,653 		JBrowse link
G FLVCR1 FLVCR choline and heme transporter 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23187127) Ensembl
MGI		 PMID:23187127 GO_REF:0000107 NCBI chr 7:11,001,155...11,038,910
Ensembl chr 7:11,001,101...11,035,980 		JBrowse link
G FOXC2 forkhead box C2 acts_upstream_of_or_within ISO (PMID:9409679) MGI PMID:9409679 NCBI chr 5:66,234,336...66,296,007
Ensembl chr 5:66,294,176...66,295,693 		JBrowse link
G FOXC2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107
G FUZ fuzzy planar cell polarity protein involved_in ISO (MGI:4438317|PMID:19767740), (MGI:5296432|PMID:21935430), (MGI:5498583|PMID:23806618) UniProt PMID:19767740 PMID:21935430 PMID:23806618 MGI:4438317 MGI:5296432 MGI:5498583 NCBI chr 1:106,742,381...106,752,543
Ensembl chr 1:106,747,860...106,805,699 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728667) Ensembl
MGI		 PMID:15728667 GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G GSC goosecoid homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7555726)
(PMID:7555718)		 Ensembl
MGI		 PMID:7555718 PMID:7555726 GO_REF:0000107 NCBI chr 8:63,684,149...63,707,030
Ensembl chr 8:63,684,137...63,707,054 		JBrowse link
G HOXA2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15634706) Ensembl
MGI		 PMID:15634706 GO_REF:0000107 NCBI chr14:40,273,992...40,276,975
Ensembl chr14:40,274,469...40,276,239 		JBrowse link
G HOXA3 homeobox A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441667) Ensembl
MGI
TreeGrafter		 PMID:9441667 GO_REF:0000107 GO_REF:0000118 NCBI chr14:40,280,866...40,326,559
Ensembl chr14:40,280,861...40,296,147 		JBrowse link
G HOXA4 homeobox A4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7628700)
(PMID:7918106)		 TreeGrafter
MGI		 PMID:7628700 PMID:7918106 GO_REF:0000118 NCBI chr14:40,302,106...40,304,437
Ensembl chr14:40,302,816...40,304,321 		JBrowse link
G HOXA5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17417799)
(PMID:7901120), (PMID:9603431)		 Ensembl
MGI		 PMID:7901120 PMID:9603431 PMID:17417799 GO_REF:0000107 NCBI chr14:40,315,409...40,319,001
Ensembl chr14:40,315,639...40,317,768 		JBrowse link
G HOXA7 homeobox A7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:40,327,918...40,334,073
Ensembl chr14:40,329,127...40,330,842 		JBrowse link
G HOXA9 homeobox A9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:40,336,829...40,340,533
Ensembl chr14:40,337,999...40,339,923 		JBrowse link
G HOXB1 homeobox B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10885747) Ensembl
MGI		 PMID:10885747 GO_REF:0000107 NCBI chr 9:24,791,848...24,795,443
Ensembl chr 9:24,792,889...24,794,302 		JBrowse link
G HOXB2 homeobox B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10885747) Ensembl
MGI		 PMID:10885747 GO_REF:0000107 NCBI chr 9:24,803,996...24,810,109
Ensembl chr 9:24,804,426...24,806,614 		JBrowse link
G HOXB3 homeobox B3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441667)
(PMID:10885747)		 Ensembl
MGI
TreeGrafter		 PMID:9441667 PMID:10885747 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:24,810,299...24,837,434
Ensembl chr 9:24,809,739...24,836,058 		JBrowse link
G HOXB4 homeobox B4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7628700)
(PMID:10885747)		 Ensembl
MGI
TreeGrafter		 PMID:7628700 PMID:10885747 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:24,837,572...24,848,600
Ensembl chr 9:24,837,914...24,840,648 		JBrowse link
G HOXB5 homeobox B5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7828847)
(PMID:10885747)		 Ensembl
MGI		 PMID:7828847 PMID:10885747 GO_REF:0000107 NCBI chr 9:24,853,759...24,856,478
Ensembl chr 9:24,853,759...24,856,437 		JBrowse link
G HOXB6 homeobox B6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10885747) Ensembl
MGI		 PMID:10885747 GO_REF:0000107 NCBI chr 9:24,858,416...24,862,360
Ensembl chr 9:24,859,054...24,860,774 		JBrowse link
G HOXB7 homeobox B7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9784603)
(PMID:10885747)		 Ensembl
MGI		 PMID:9784603 PMID:10885747 GO_REF:0000107 NCBI chr 9:24,870,037...24,874,517
Ensembl chr 9:24,870,612...24,873,453 		JBrowse link
G HOXB8 homeobox B8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10885747)
(PMID:10559485)		 Ensembl
MGI		 PMID:10559485 PMID:10885747 GO_REF:0000107 NCBI chr 9:24,874,893...24,888,981
Ensembl chr 9:24,874,899...24,877,504 		JBrowse link
G HOXB9 homeobox B9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:24,884,101...24,889,904
Ensembl chr 9:24,872,950...24,889,376 		JBrowse link
G HOXC4 homeobox C4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:1,209,510...1,246,873
Ensembl chr27:1,172,229...1,226,572 		JBrowse link
G HOXC9 homeobox C9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7547473) TreeGrafter
MGI		 PMID:7547473 GO_REF:0000118
G HOXC9 homeobox C9 involved_in IEA TreeGrafter GO_REF:0000118
G HOXD10 homeobox D10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10642795) Ensembl
MGI		 PMID:10642795 GO_REF:0000107 NCBI chr36:19,924,352...19,927,706
Ensembl chr36:19,916,175...19,927,724 		JBrowse link
G HOXD3 homeobox D3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7913519)
(PMID:7910549), (PMID:7913519)		 Ensembl
MGI
TreeGrafter		 PMID:7910549 PMID:7913519 GO_REF:0000107 GO_REF:0000118 NCBI chr36:19,961,393...19,981,672
Ensembl chr36:19,960,761...19,980,525 		JBrowse link
G HOXD4 homeobox D4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7750651)
(PMID:7628700)		 Ensembl
MGI
TreeGrafter		 PMID:7628700 PMID:7750651 GO_REF:0000107 GO_REF:0000118
G HOXD9 homeobox D9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10642795) Ensembl
MGI
TreeGrafter		 PMID:10642795 GO_REF:0000107 GO_REF:0000118 NCBI chr36:19,929,479...19,932,861 JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO (PMID:10579729) MGI PMID:10579729 NCBI chr 2:77,263,534...77,366,558
Ensembl chr 2:77,301,858...77,367,724 		JBrowse link
G MDFI MyoD family inhibitor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9799236) Ensembl
MGI		 PMID:9799236 GO_REF:0000107 NCBI chr12:10,324,499...10,339,699
Ensembl chr12:10,323,552...10,339,697 		JBrowse link
G MEF2C myocyte enhancer factor 2C acts_upstream_of_or_within ISO (PMID:17420000) MGI PMID:17420000 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in ISO (MGI:5551355|PMID:24052814) UniProt PMID:24052814 MGI:5551355 NCBI chr 1:112,020,344...112,063,120
Ensembl chr 1:112,021,960...112,024,773 		JBrowse link
G MEN1 menin 1 acts_upstream_of_or_within ISO (PMID:17927973) MGI PMID:17927973 NCBI chr18:52,346,747...52,352,884
Ensembl chr18:52,346,933...52,353,340 		JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (PMID:17360777) MGI PMID:17360777 NCBI chr17:11,720,857...11,724,308 JBrowse link
G MYF5 myogenic factor 5 acts_upstream_of_or_within ISO (PMID:10929709) MGI PMID:10929709 NCBI chr15:23,049,235...23,051,604
Ensembl chr15:23,048,585...23,051,970 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15175245) Ensembl
MGI		 PMID:15175245 GO_REF:0000107 NCBI chr13:1,019,167...1,031,622
Ensembl chr13:1,023,879...1,031,225 		JBrowse link
G PCGF2 polycomb group ring finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11290297) Ensembl
MGI		 PMID:11290297 GO_REF:0000107 NCBI chr 9:23,488,862...23,499,769
Ensembl chr 9:23,488,857...23,499,549 		JBrowse link
G PRRX1 paired related homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7758948)
(PMID:11532916), (PMID:9729491), (PMID:9876178)		 Ensembl
MGI		 PMID:7758948 PMID:9729491 PMID:9876178 PMID:11532916 GO_REF:0000107 NCBI chr 7:28,065,570...28,138,734
Ensembl chr 7:28,068,711...28,138,787 		JBrowse link
G PRRX2 paired related homeobox 2 acts_upstream_of_or_within ISO (PMID:11532916), (PMID:9729491), (PMID:9876178) MGI PMID:9729491 PMID:9876178 PMID:11532916 NCBI chr 9:54,089,046...54,112,595
Ensembl chr 9:54,093,163...54,096,348 		JBrowse link
G SATB2 SATB homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16960803)
(PMID:16751105)		 Ensembl
MGI		 PMID:16751105 PMID:16960803 GO_REF:0000107 NCBI chr37:8,548,295...8,837,416
Ensembl chr37:8,551,017...8,731,149 		JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15788460) Ensembl
MGI		 PMID:15788460 GO_REF:0000107 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534 		JBrowse link
G SIX2 SIX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15634706) Ensembl
MGI		 PMID:15634706 GO_REF:0000107 NCBI chr10:47,399,152...47,403,503
Ensembl chr10:47,400,034...47,403,509 		JBrowse link
G SIX4 SIX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15788460) Ensembl
MGI		 PMID:15788460 GO_REF:0000107 NCBI chr 8:35,735,893...35,748,976
Ensembl chr 8:35,737,058...35,748,893 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA Ensembl GO_REF:0000107
G TBX15 T-box transcription factor 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728667) Ensembl
MGI		 PMID:15728667 GO_REF:0000107 NCBI chr17:56,079,739...56,190,417
Ensembl chr17:56,081,411...56,204,192 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15030764) Ensembl
MGI		 PMID:15030764 GO_REF:0000107
G WNT9A Wnt family member 9A acts_upstream_of_or_within ISO (PMID:16818445) MGI PMID:16818445 NCBI chr14:946,843...959,289
Ensembl chr14:953,244...959,295 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9389660) Ensembl
MGI		 PMID:9389660 GO_REF:0000107 NCBI chr 2:15,300,401...15,481,535
Ensembl chr 2:15,299,723...15,481,495 		JBrowse link
embryonic viscerocranium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHST11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16079159) Ensembl
MGI		 PMID:16079159 GO_REF:0000107 NCBI chr10:33,555,629...33,810,808
Ensembl chr10:33,555,628...33,810,558 		JBrowse link
G FOXC2 forkhead box C2 acts_upstream_of_or_within ISO (PMID:9409679) MGI PMID:9409679 NCBI chr 5:66,234,336...66,296,007
Ensembl chr 5:66,294,176...66,295,693 		JBrowse link
G FOXC2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107
G HOXA2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16221728) Ensembl
MGI		 PMID:16221728 GO_REF:0000107 NCBI chr14:40,273,992...40,276,975
Ensembl chr14:40,274,469...40,276,239 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G MEF2C myocyte enhancer factor 2C acts_upstream_of_or_within ISO (PMID:17420000) MGI PMID:17420000 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852 		JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:41,316,247...41,495,226
Ensembl chr 1:41,309,419...41,495,216 		JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16020517) Ensembl
MGI		 PMID:16020517 GO_REF:0000107 NCBI chr 4:58,580,231...58,639,750
Ensembl chr 4:58,532,148...58,640,191 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19763162) Ensembl
MGI
TreeGrafter		 PMID:19763162 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:71,583,118...71,780,986
Ensembl chr 4:71,583,732...71,780,852 		JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17473173) Ensembl
MGI		 PMID:17473173 GO_REF:0000107 NCBI chr29:21,886,014...21,912,451
Ensembl chr29:21,885,012...21,911,303 		JBrowse link
G TBX1 T-box transcription factor 1 involved_in ISO (PMID:14585638) UniProt PMID:14585638 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784 		JBrowse link
endoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23824574)
(PMID:12194849)		 Ensembl
MGI		 PMID:12194849 PMID:23824574 GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (PMID:18462699) MGI PMID:18462699 NCBI chr26:35,697,428...35,701,596
Ensembl chr26:35,697,618...35,701,496 		JBrowse link
G DUSP1 dual specificity phosphatase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:39,588,833...39,591,065
Ensembl chr 4:39,588,339...39,590,514 		JBrowse link
G DUSP2 dual specificity phosphatase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:34,586,635...34,589,076
Ensembl chr17:34,586,716...34,588,453 		JBrowse link
G DUSP4 dual specificity phosphatase 4 involved_in IEA TreeGrafter GO_REF:0000118
G DUSP5 dual specificity phosphatase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:21,829,891...21,844,590
Ensembl chr28:21,829,921...21,841,454 		JBrowse link
G EOMES eomesodermin involved_in
acts_upstream_of_or_within		 ISO (MGI:3772748|PMID:18171685)
(PMID:21245162), (PMID:21822279)		 UniProt
MGI		 PMID:18171685 PMID:21245162 PMID:21822279 MGI:3772748 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527 		JBrowse link
G GATA4 GATA binding protein 4 acts_upstream_of_or_within ISO (PMID:8582296) MGI PMID:8582296 NCBI chr25:26,126,172...26,211,474
Ensembl chr25:26,127,853...26,182,989 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15355796) Ensembl
MGI		 PMID:15355796 GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G MIXL1 Mix paired-like homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17151016) TreeGrafter
MGI		 PMID:17151016 GO_REF:0000118 NCBI chr 7:38,651,481...38,652,560 JBrowse link
G MIXL1 Mix paired-like homeobox involved_in IEA TreeGrafter GO_REF:0000118
G NOG noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18462699) Ensembl
MGI		 PMID:18462699 GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G SMAD2 SMAD family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21822279) Ensembl
MGI		 PMID:21822279 GO_REF:0000107 NCBI chr 7:43,696,883...43,778,063
Ensembl chr 7:43,700,445...43,769,983 		JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124 		JBrowse link
G SOX7 SRY-box transcription factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:27,216,111...27,222,142
Ensembl chr25:27,215,528...27,220,227 		JBrowse link
G TNRC6C trinucleotide repeat containing adaptor 6C acts_upstream_of_or_within ISO (PMID:22187428) MGI PMID:22187428 NCBI chr 9:3,018,599...3,122,664
Ensembl chr 9:3,020,533...3,171,471 		JBrowse link
endodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRD3 bromodomain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:50,290,488...50,322,243
Ensembl chr 9:50,288,240...50,322,127 		JBrowse link
G CMSS1 cms1 ribosomal small subunit homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:6,442,721...6,818,394
Ensembl chr33:6,443,035...6,818,171 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:47,425,387...47,622,189
Ensembl chr 6:47,425,307...47,621,012 		JBrowse link
G COL12A1 collagen type XII alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:36,720,686...36,838,321
Ensembl chr12:36,646,408...36,838,622 		JBrowse link
G COL4A2 collagen type IV alpha 2 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:58,656,579...58,820,560
Ensembl chr22:58,697,175...58,773,297 		JBrowse link
G COL6A1 collagen type VI alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:39,301,718...39,319,895
Ensembl chr31:39,301,748...39,448,062 		JBrowse link
G COL7A1 collagen type VII alpha 1 chain involved_in ISO (PMID:23154389) UniProt PMID:23154389 NCBI chr20:40,519,121...40,550,305
Ensembl chr20:40,519,378...40,552,935 		JBrowse link
G COL8A1 collagen type VIII alpha 1 chain involved_in ISO (PMID:23154389) UniProt PMID:23154389 NCBI chr33:6,285,742...6,428,172
Ensembl chr33:6,285,415...6,425,414 		JBrowse link
G FN1 fibronectin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:22,456,854...22,522,410
Ensembl chr37:22,420,428...22,523,123 		JBrowse link
G GATA6 GATA binding protein 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9832509) Ensembl
MGI		 PMID:9832509 GO_REF:0000107 NCBI chr 7:65,932,114...65,962,574 JBrowse link
G GRB2 growth factor receptor bound protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16908534) Ensembl
MGI		 PMID:16908534 GO_REF:0000107 NCBI chr 9:5,108,128...5,182,091
Ensembl chr 9:5,117,164...5,180,296 		JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,348,101...8,491,435 JBrowse link
G HSBP1 heat shock factor binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24380799) Ensembl
MGI		 PMID:24380799 GO_REF:0000107 NCBI chr 5:68,474,960...68,479,206
Ensembl chr 5:68,475,948...68,479,145 		JBrowse link
G INHBA inhibin subunit beta A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:8,272,978...8,288,432
Ensembl chr18:8,272,872...8,283,794 		JBrowse link
G ITGA4 integrin subunit alpha 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:24,670,464...24,686,719
Ensembl chr36:24,653,408...24,729,057 		JBrowse link
G ITGA5 integrin subunit alpha 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:904,892...924,757
Ensembl chr27:904,102...924,084 		JBrowse link
G ITGA7 integrin subunit alpha 7 involved_in ISO (PMID:23154389) UniProt PMID:23154389 NCBI chr10:91,782...110,839
Ensembl chr10:91,391...110,817 		JBrowse link
G ITGAV integrin subunit alpha V involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:28,815,215...28,890,569
Ensembl chr36:28,804,013...28,887,430 		JBrowse link
G ITGB2 integrin subunit beta 2 involved_in ISO (PMID:23154389) UniProt PMID:23154389 NCBI chr31:38,520,733...38,547,003
Ensembl chr31:38,521,103...38,547,018 		JBrowse link
G ITGB5 integrin subunit beta 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:27,797,204...27,912,558
Ensembl chr33:27,797,667...27,912,584 		JBrowse link
G LAMA3 laminin subunit alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:64,405,719...64,654,910
Ensembl chr 7:64,406,082...64,655,268 		JBrowse link
G LAMB1 laminin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:12,634,640...12,700,311
Ensembl chr18:12,630,554...12,700,308 		JBrowse link
G LAMB3 laminin subunit beta 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:8,272,326...8,313,322
Ensembl chr 7:8,272,736...8,310,474 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16908534) Ensembl
MGI		 PMID:16908534 GO_REF:0000107 NCBI chr30:30,683,192...30,760,479
Ensembl chr30:30,683,107...30,760,479 		JBrowse link
G MIXL1 Mix paired-like homeobox involved_in ISO (MGI:5447921|PMID:19038793) BHF-UCL PMID:19038793 MGI:5447921 NCBI chr 7:38,651,481...38,652,560 JBrowse link
G MMP14 matrix metallopeptidase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:3,183,419...3,193,079
Ensembl chr 8:3,183,606...3,194,122 		JBrowse link
G MMP15 matrix metallopeptidase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,501,783...58,512,507
Ensembl chr 2:58,504,848...58,512,371 		JBrowse link
G MMP2 matrix metallopeptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:60,471,092...60,492,991
Ensembl chr 2:60,471,257...60,494,113 		JBrowse link
G MMP8 matrix metallopeptidase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:29,036,381...29,047,180
Ensembl chr 5:29,035,820...29,046,808 		JBrowse link
G MMP9 matrix metallopeptidase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:33,274,260...33,281,116
Ensembl chr24:33,274,268...33,281,293 		JBrowse link
G MYH9 myosin heavy chain 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:28,063,626...28,122,953
Ensembl chr10:28,063,624...28,122,953 		JBrowse link
G NODAL nodal growth differentiation factor involved_in ISO (PMID:21741376) BHF-UCL PMID:21741376 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151 		JBrowse link
G NR0B1 nuclear receptor subfamily 0 group B member 1 acts_upstream_of_or_within ISO (PMID:16466956) MGI PMID:16466956 NCBI chr  X:25,396,527...25,401,587
Ensembl chr  X:25,396,527...25,401,715 		JBrowse link
G SEBOX SEBOX homeobox involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:42,614,770...42,616,412
Ensembl chr 9:42,614,941...42,630,864 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:41,675,539...41,800,697
Ensembl chr20:41,675,599...41,800,612 		JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:17940068) Ensembl
MGI		 PMID:17940068 GO_REF:0000107 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124 		JBrowse link
G VTN vitronectin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:42,617,860...42,620,825
Ensembl chr 9:42,614,941...42,630,864 		JBrowse link
endodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC73 cell division cycle 73 involved_in ISO (MGI:3849235|PMID:19345177) UniProt PMID:19345177 MGI:3849235 NCBI chr38:5,826,209...5,937,930
Ensembl chr38:5,805,916...5,938,111 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12194849) Ensembl
MGI		 PMID:12194849 GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:33,915,804...33,949,597
Ensembl chr21:33,915,772...33,949,103 		JBrowse link
G LEO1 LEO1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:17,614,502...17,651,715
Ensembl chr30:17,598,076...17,651,290 		JBrowse link
G PAF1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,828,219...113,832,747
Ensembl chr 1:113,828,007...113,832,735 		JBrowse link
G POU5F1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:10742100) MGI PMID:10742100
G RTF1 RTF1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,468,001...8,524,712
Ensembl chr30:8,467,761...8,522,874 		JBrowse link
endodermal cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA6 GATA binding protein 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20308546) Ensembl
MGI		 PMID:20308546 GO_REF:0000107 NCBI chr 7:65,932,114...65,962,574 JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20308546) Ensembl
MGI		 PMID:20308546 GO_REF:0000107 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124 		JBrowse link
endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EOMES eomesodermin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21245162) TreeGrafter
MGI		 PMID:21245162 GO_REF:0000118 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527 		JBrowse link
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18635606) Ensembl
MGI		 PMID:18635606 GO_REF:0000107 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993 		JBrowse link
G NANOG Nanog homeobox acts_upstream_of_or_within ISO (PMID:20713518) MGI PMID:20713518 NCBI chr27:37,262,558...37,266,449 JBrowse link
G POU5F1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:20713518) MGI PMID:20713518
G SOX17 SRY-box transcription factor 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:21245162) MGI PMID:21245162 NCBI chr34:14,853,000...14,855,153 JBrowse link
epiboly involved in gastrulation with mouth forming second term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MEGF8 multiple EGF like domains 8 involved_in ISO (PMID:23063620) UniProt PMID:23063620 NCBI chr 1:112,020,344...112,063,120
Ensembl chr 1:112,021,960...112,024,773 		JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25758223) Ensembl
MGI		 PMID:25758223 GO_REF:0000107 NCBI chr13:3,204,898...3,362,533
Ensembl chr13:3,204,925...3,362,096 		JBrowse link
G LOC119878551 kunitz-type protease inhibitor 2-like involved_in IEA Ensembl GO_REF:0000107
G SPINT2 serine peptidase inhibitor, Kunitz type 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19592578) Ensembl
MGI		 PMID:19592578 GO_REF:0000107 NCBI chr 1:114,699,050...114,727,802
Ensembl chr 1:114,699,241...114,727,763 		JBrowse link
G ST14 ST14 transmembrane serine protease matriptase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19592578) Ensembl
MGI		 PMID:19592578 GO_REF:0000107 NCBI chr 5:4,652,493...4,666,728
Ensembl chr 5:4,651,863...4,691,069 		JBrowse link
establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTHRC1 collagen triple helix repeat containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18606138) Ensembl
MGI		 PMID:18606138 GO_REF:0000107 NCBI chr13:4,801,049...4,811,565
Ensembl chr13:4,805,577...4,811,282 		JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:18606138) MGI PMID:18606138 NCBI chr38:21,822,873...21,824,537 JBrowse link
establishment or maintenance of polarity of embryonic epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LLGL2 LLGL scribble cell polarity complex component 2 acts_upstream_of_or_within ISO (PMID:21606200) MGI PMID:21606200 NCBI chr 9:4,975,309...5,008,383
Ensembl chr 9:4,975,660...4,996,775 		JBrowse link
G PALS1 protein associated with LIN7 1, MAGUK p55 family member involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:41,230,230...41,330,017
Ensembl chr 8:41,275,947...41,327,348 		JBrowse link
G WNT7B Wnt family member 7B acts_upstream_of_or_within ISO (PMID:19060336) MGI PMID:19060336 NCBI chr10:20,160,916...20,208,786
Ensembl chr10:20,160,206...20,243,160 		JBrowse link
floor plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK20 cyclin dependent kinase 20 acts_upstream_of_or_within ISO (PMID:28817564) MGI PMID:28817564 NCBI chr 1:97,623,126...97,662,668
Ensembl chr 1:97,622,998...97,662,662 		JBrowse link
G CLUAP1 clusterin associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23351563) Ensembl
MGI		 PMID:23351563 GO_REF:0000107 NCBI chr 6:37,708,258...37,746,361
Ensembl chr 6:37,708,089...37,746,398 		JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9636069), (PMID:9655799) Ensembl
MGI		 PMID:9636069 PMID:9655799 GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
floor plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:11311163) MGI PMID:11311163 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151 		JBrowse link
formation of primary germ layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID1A AT-rich interaction domain 1A acts_upstream_of_or_within ISO (PMID:18448678) MGI PMID:18448678 NCBI chr 2:73,331,606...73,401,151
Ensembl chr 2:73,324,852...73,401,102 		JBrowse link
G ATOH8 atonal bHLH transcription factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,255,725...39,280,022 JBrowse link
G KIF16B kinesin family member 16B involved_in ISO (MGI:4889011|PMID:21238925) UniProt PMID:21238925 MGI:4889011 NCBI chr24:6,260,558...6,576,544
Ensembl chr24:6,261,553...6,575,845 		JBrowse link
gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10226013) Ensembl
MGI		 PMID:10226013 GO_REF:0000107 NCBI chr36:3,743,257...3,818,659
Ensembl chr36:3,744,163...3,818,652 		JBrowse link
G APLN apelin involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:100,863,360...100,873,105 JBrowse link
G ARFRP1 ADP ribosylation factor related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11839814) Ensembl
MGI		 PMID:11839814 GO_REF:0000107 NCBI chr24:47,250,442...47,256,637
Ensembl chr24:47,251,705...47,256,614 		JBrowse link
G ARID1A AT-rich interaction domain 1A acts_upstream_of_or_within ISO (PMID:18448678) MGI PMID:18448678 NCBI chr 2:73,331,606...73,401,151
Ensembl chr 2:73,324,852...73,401,102 		JBrowse link
G ARMC5 armadillo repeat containing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28911199) Ensembl
MGI		 PMID:28911199 GO_REF:0000107 NCBI chr 6:16,782,732...16,789,490
Ensembl chr 6:16,781,860...16,788,878 		JBrowse link
G CER1 cerberus 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18241853) Ensembl
MGI		 PMID:18241853 GO_REF:0000107 NCBI chr11:35,155,568...35,159,085
Ensembl chr11:35,156,430...35,158,942 		JBrowse link
G CRIPTO cripto, EGF-CFC family member acts_upstream_of_or_within ISO (PMID:18241853) MGI PMID:18241853 NCBI chr20:42,137,939...42,140,590 JBrowse link
G CUL3 cullin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10500095) Ensembl
MGI		 PMID:10500095 GO_REF:0000107 NCBI chr25:37,730,903...37,819,851
Ensembl chr25:37,733,229...37,800,886 		JBrowse link
G DLD dihydrolipoamide dehydrogenase acts_upstream_of_or_within ISO (PMID:9405644) MGI PMID:9405644 NCBI chr18:12,703,340...12,734,408
Ensembl chr18:12,703,341...12,734,479 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect		 IEA
ISO		 (PMID:20080592)
(PMID:10926768)		 Ensembl
MGI		 PMID:10926768 PMID:20080592 GO_REF:0000107 NCBI chr13:17,172,497...17,457,084
Ensembl chr13:17,172,705...17,456,469 		JBrowse link
G HIRA histone cell cycle regulator acts_upstream_of_or_within ISO (PMID:11884616) MGI PMID:11884616 NCBI chr26:29,777,984...29,867,992
Ensembl chr26:29,778,086...29,867,559 		JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:7774020)
(PMID:7618107)
(PMID:7550343)		 MGI PMID:7550343 PMID:7618107 PMID:7774020 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290 		JBrowse link
G LMBRD1 LMBR1 domain containing 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr12:32,274,056...32,383,737
Ensembl chr12:32,274,412...32,383,578 		JBrowse link
G LOC478184 pre-mRNA-splicing factor SYF2 acts_upstream_of_or_within ISO (PMID:22448250) MGI PMID:22448250 NCBI chr 2:74,573,023...74,580,061 JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,738,333...52,739,962
Ensembl chr 3:52,738,366...52,739,755 		JBrowse link
G MIXL1 Mix paired-like homeobox acts_upstream_of_or_within ISO (PMID:12117810) MGI PMID:12117810 NCBI chr 7:38,651,481...38,652,560 JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:14511481)
(PMID:11311163)		 MGI PMID:11311163 PMID:14511481 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151 		JBrowse link
G NR4A3 nuclear receptor subfamily 4 group A member 3 involved_in ISO (MGI:3042044|PMID:13129926) UniProt PMID:13129926 MGI:3042044 NCBI chr11:56,806,506...56,846,997
Ensembl chr11:56,812,804...56,847,689 		JBrowse link
G RACK1 receptor for activated C kinase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:426,734...431,087
Ensembl chr11:426,215...431,089 		JBrowse link
G RBM14 RNA binding motif protein 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31794640) Ensembl
MGI		 PMID:31794640 GO_REF:0000107 NCBI chr18:50,683,227...50,728,512
Ensembl chr18:50,705,024...50,811,319 		JBrowse link
G RIC8A RIC8 guanine nucleotide exchange factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21069829) Ensembl
MGI		 PMID:21069829 GO_REF:0000107 NCBI chr18:25,363,031...25,368,645
Ensembl chr18:25,362,875...25,368,378 		JBrowse link
G RPS6 ribosomal protein S6 acts_upstream_of_or_within ISO (PMID:17000767) MGI PMID:17000767 NCBI chr11:39,161,422...39,165,148
Ensembl chr11:39,161,422...39,165,148 		JBrowse link
G SMAD2 SMAD family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 NCBI chr 7:43,696,883...43,778,063
Ensembl chr 7:43,700,445...43,769,983 		JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 NCBI chr30:31,246,313...31,360,098
Ensembl chr30:31,245,657...31,363,337 		JBrowse link
G SMAD4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9420335) Ensembl
MGI		 PMID:9420335 GO_REF:0000107 NCBI chr 1:23,875,989...23,930,027
Ensembl chr 1:23,882,139...23,969,405 		JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20123909) Ensembl
MGI		 PMID:20123909 GO_REF:0000107 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124 		JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9799237) Ensembl
MGI		 PMID:9799237 GO_REF:0000107 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533 		JBrowse link
G TCF3 transcription factor 3 involved_in ISO (MGI:5574293|PMID:21828274) BHF-UCL PMID:21828274 MGI:5574293 NCBI chr20:57,255,091...57,284,223
Ensembl chr20:57,254,384...57,283,981 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10030593) Ensembl
MGI		 PMID:10030593 GO_REF:0000107 NCBI chr23:13,886,869...13,946,480
Ensembl chr23:13,889,000...13,977,636 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17000767) Ensembl
MGI		 PMID:17000767 GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
G TXNRD1 thioredoxin reductase 1 acts_upstream_of_or_within ISO (PMID:17697936) MGI PMID:17697936 NCBI chr10:33,904,065...34,021,549
Ensembl chr10:33,886,343...34,021,696 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597 		JBrowse link
gastrulation with mouth forming second term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17117439) Ensembl
MGI		 PMID:17117439 GO_REF:0000107 NCBI chr36:3,743,257...3,818,659
Ensembl chr36:3,744,163...3,818,652 		JBrowse link
G ACVR2A activin A receptor type 2A acts_upstream_of_or_within ISO (PMID:10452853) MGI PMID:10452853 NCBI chr19:49,642,429...49,726,720
Ensembl chr19:49,641,219...49,723,420 		JBrowse link
G ACVR2B activin A receptor type 2B acts_upstream_of_or_within ISO (PMID:10452853) MGI PMID:10452853 NCBI chr23:8,211,555...8,225,596
Ensembl chr23:8,192,483...8,218,894 		JBrowse link
G AMOT angiomotin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12676095) Ensembl
MGI		 PMID:12676095 GO_REF:0000107 NCBI chr  X:85,742,610...85,807,557
Ensembl chr  X:85,745,207...85,807,353 		JBrowse link
G CHRD chordin acts_upstream_of_or_within ISO (PMID:12810603) MGI PMID:12810603 NCBI chr34:17,255,770...17,264,776
Ensembl chr34:17,255,562...17,271,713 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8582267) Ensembl
MGI		 PMID:8582267 GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G DACT1 dishevelled binding antagonist of beta catenin 1 acts_upstream_of_or_within ISO (PMID:19701191) MGI PMID:19701191 NCBI chr 8:33,950,016...33,959,671
Ensembl chr 8:33,949,926...33,958,449 		JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15870281) Ensembl
MGI		 PMID:15870281 GO_REF:0000107 NCBI chr10:11,445,843...11,552,325
Ensembl chr10:11,539,994...11,552,890 		JBrowse link
G GATA4 GATA binding protein 4 acts_upstream_of_or_within ISO (PMID:9136933) MGI PMID:9136933 NCBI chr25:26,126,172...26,211,474
Ensembl chr25:26,127,853...26,182,989 		JBrowse link
G LDB1 LIM domain binding 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12490556) Ensembl
MGI		 PMID:12490556 GO_REF:0000107 NCBI chr28:14,646,409...14,658,324
Ensembl chr28:14,646,056...14,658,548 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15355796) Ensembl
MGI		 PMID:15355796 GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G LRP5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15142971) Ensembl
MGI
TreeGrafter		 PMID:15142971 GO_REF:0000107 GO_REF:0000118 NCBI chr18:49,439,494...49,555,375
Ensembl chr18:49,439,483...49,516,396 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:15142971) MGI PMID:15142971 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G NAT8 N-acetyltransferase 8 (putative) involved_in ISO (MGI:2135831|PMID:11397015) UniProt PMID:11397015 MGI:2135831 NCBI chr17:49,285,915...49,288,362 JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:14607953) MGI PMID:14607953 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151 		JBrowse link
G NSD1 nuclear receptor binding SET domain protein 1 acts_upstream_of_or_within ISO (PMID:12805229) MGI PMID:12805229 NCBI chr 4:36,058,351...36,214,254
Ensembl chr 4:36,063,134...36,210,999 		JBrowse link
G PLPP3 phospholipid phosphatase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12925589) Ensembl
MGI		 PMID:12925589 GO_REF:0000107 NCBI chr 5:52,924,443...53,006,298
Ensembl chr 5:52,923,833...53,005,493 		JBrowse link
G RNF2 ring finger protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12589020) Ensembl
MGI		 PMID:12589020 GO_REF:0000107 NCBI chr 7:18,240,672...18,283,091
Ensembl chr 7:18,236,115...18,281,387 		JBrowse link
G SMAD4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15215210) Ensembl
MGI		 PMID:15215210 GO_REF:0000107 NCBI chr 1:23,875,989...23,930,027
Ensembl chr 1:23,882,139...23,969,405 		JBrowse link
G SMIM14 small integral membrane protein 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:72,839,897...72,934,335
Ensembl chr 3:72,839,920...72,963,208 		JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15489520) Ensembl
MGI		 PMID:15489520 GO_REF:0000107 NCBI chr21:17,819,846...20,234,096
Ensembl chr21:19,732,991...20,230,305 		JBrowse link
G UGDH UDP-glucose 6-dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755804) Ensembl
MGI		 PMID:15755804 GO_REF:0000107 NCBI chr 3:72,935,532...72,964,151
Ensembl chr 3:72,839,920...72,963,208 		JBrowse link
G ZBTB17 zinc finger and BTB domain containing 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14560010) Ensembl
MGI		 PMID:14560010 GO_REF:0000107 NCBI chr 2:81,652,015...81,682,647
Ensembl chr 2:81,652,157...81,682,660 		JBrowse link
heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLNR apelin receptor involved_in ISO (MGI:5584055|PMID:23603510) BHF-UCL PMID:23603510 MGI:5584055 NCBI chr18:38,878,621...38,882,280
Ensembl chr18:38,878,947...38,886,206 		JBrowse link
G ARL13B ADP ribosylation factor like GTPase 13B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22554696) Ensembl
MGI		 PMID:22554696 GO_REF:0000107 NCBI chr33:1,698,360...1,762,846
Ensembl chr33:1,698,363...1,761,641 		JBrowse link
G ASB2 ankyrin repeat and SOCS box containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:63,008,206...63,051,809
Ensembl chr 8:63,008,575...63,051,581 		JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:24,127,390...24,272,473
Ensembl chr21:24,127,598...24,272,657 		JBrowse link
G CCDC103 coiled-coil domain containing 103 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:18,581,544...18,585,939
Ensembl chr 9:18,582,468...18,584,612 		JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:13,915,763...13,959,574
Ensembl chr34:13,905,434...13,959,340 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:1,616,029...1,656,043
Ensembl chr 9:1,601,121...1,656,597 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15750185) Ensembl
MGI		 PMID:15750185 GO_REF:0000107 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995 		JBrowse link
G CLUAP1 clusterin associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23742838) Ensembl
MGI		 PMID:23742838 GO_REF:0000107 NCBI chr 6:37,708,258...37,746,361
Ensembl chr 6:37,708,089...37,746,398 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (MGI:2661305|PMID:12730124) BHF-UCL PMID:12730124 MGI:2661305 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348 		JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:68,184,532...68,205,651
Ensembl chr 5:68,184,532...68,205,656 		JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,507,803...56,519,382
Ensembl chr 5:56,507,739...56,519,491 		JBrowse link
G DVL2 dishevelled segment polarity protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,194,326...32,201,922
Ensembl chr 5:32,194,313...32,201,857 		JBrowse link
G ENG endoglin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:55,558,246...55,590,081
Ensembl chr 9:55,558,305...55,589,064 		JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10411502) Ensembl
MGI		 PMID:10411502 GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G FOXH1 forkhead box H1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,883,554...37,887,324
Ensembl chr13:37,882,687...37,885,319 		JBrowse link
G GATA4 GATA binding protein 4 involved_in ISO (MGI:3052615|PMID:15310850) BHF-UCL PMID:15310850 MGI:3052615 NCBI chr25:26,126,172...26,211,474
Ensembl chr25:26,127,853...26,182,989 		JBrowse link
G GJA1 gap junction protein alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9486664) Ensembl
MGI		 PMID:9486664 GO_REF:0000107 NCBI chr 1:60,941,772...60,944,694
Ensembl chr 1:60,929,097...60,942,936 		JBrowse link
G HAND1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9500551) Ensembl
MGI		 PMID:9500551 GO_REF:0000107 NCBI chr 4:55,231,061...55,234,640
Ensembl chr 4:55,231,481...55,234,265 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9171826) Ensembl
MGI		 PMID:9171826 GO_REF:0000107 NCBI chr25:24,140,496...24,143,143
Ensembl chr25:24,141,243...24,152,958 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14659802) Ensembl
MGI		 PMID:14659802 GO_REF:0000107 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692 		JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18930042) Ensembl
MGI		 PMID:18930042 GO_REF:0000107 NCBI chr17:21,389,462...21,426,970
Ensembl chr17:21,389,482...21,426,796 		JBrowse link
G IFT52 intraflagellar transport 52 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15930098) Ensembl
MGI		 PMID:15930098 GO_REF:0000107 NCBI chr24:31,295,987...31,334,825
Ensembl chr24:31,296,015...31,334,808 		JBrowse link
G IFT57 intraflagellar transport 57 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17027958) Ensembl
MGI		 PMID:17027958 GO_REF:0000107 NCBI chr33:13,432,902...13,486,692
Ensembl chr33:13,410,544...13,486,612 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:25,616,942...25,622,989 JBrowse link
G KDM2A lysine demethylase 2A acts_upstream_of_or_within ISO (PMID:25463925) MGI PMID:25463925 NCBI chr18:50,178,511...50,294,097
Ensembl chr18:50,181,024...50,291,127 		JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within ISO (PMID:10330409) MGI PMID:10330409 NCBI chr11:20,988,516...21,044,151
Ensembl chr11:20,928,655...21,044,090 		JBrowse link
G LBX1 ladybird homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12522123) Ensembl
MGI		 PMID:12522123 GO_REF:0000107 NCBI chr28:13,872,846...13,875,521
Ensembl chr28:13,873,727...13,875,486 		JBrowse link
G LOC609557 cryptic protein acts_upstream_of_or_within ISO (PMID:10521397) MGI PMID:10521397 NCBI chr19:20,318,937...20,384,369 JBrowse link
G LOC609612 folate receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:25,944,350...25,951,010 JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19795512) MGI PMID:19795512 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISO (MGI:3830899|PMID:16680724) UniProt PMID:16680724 MGI:3830899 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852 		JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,738,333...52,739,962
Ensembl chr 3:52,738,366...52,739,755 		JBrowse link
G MIB1 MIB E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16000382) Ensembl
MGI		 PMID:16000382 GO_REF:0000107 NCBI chr 7:66,173,414...66,289,477
Ensembl chr 7:66,178,594...66,289,491 		JBrowse link
G NKX2-5 NK2 homeobox 5 acts_upstream_of_or_within ISO (PMID:16510504)
(PMID:7628699), (PMID:9192865)		 MGI PMID:7628699 PMID:9192865 PMID:16510504 NCBI chr 4:39,240,755...39,254,585
Ensembl chr 4:39,244,286...39,247,592 		JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:16496285) MGI PMID:16496285 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277 		JBrowse link
G NOTCH2 notch receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:56,854,825...57,020,157
Ensembl chr17:56,860,429...57,020,857 		JBrowse link
G NOTO notochord homeobox acts_upstream_of_or_within ISO (PMID:17884984) MGI PMID:17884984
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:29,662,486...29,703,629
Ensembl chr23:29,645,641...29,703,805 		JBrowse link
G OVOL2 ovo like zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17573777) Ensembl
MGI		 PMID:17573777 GO_REF:0000107 NCBI chr24:5,020,608...5,050,487
Ensembl chr24:5,020,813...5,050,309 		JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:11,383,441...11,437,603
Ensembl chr32:11,383,424...11,435,438 		JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10557208) Ensembl
MGI		 PMID:10557208 GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10411502), (PMID:10500184) Ensembl
MGI		 PMID:10411502 PMID:10500184 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 NCBI chr30:31,246,313...31,360,098
Ensembl chr30:31,245,657...31,363,337 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17610846) Ensembl
MGI		 PMID:17610846 GO_REF:0000107 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124 		JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15929941) Ensembl
MGI		 PMID:15929941 GO_REF:0000107 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533 		JBrowse link
G STIL STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chr15:13,369,292...13,431,677
Ensembl chr15:13,371,925...13,430,951 		JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16155214) Ensembl
MGI		 PMID:16155214 GO_REF:0000107 NCBI chr28:14,992,989...15,115,499
Ensembl chr28:14,992,618...15,112,389 		JBrowse link
G TBX2 T-box transcription factor 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:35,237,323...35,245,066
Ensembl chr 9:35,235,649...35,245,736 		JBrowse link
G TBX20 T-box transcription factor 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15843407)
(PMID:15901664)		 Ensembl
MGI
TreeGrafter		 PMID:15843407 PMID:15901664 GO_REF:0000107 GO_REF:0000118 NCBI chr14:46,891,706...46,946,899
Ensembl chr14:46,896,228...46,947,507 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17460765)
(PMID:18723448)		 Ensembl
MGI		 PMID:17460765 PMID:18723448 GO_REF:0000107 NCBI chr26:11,694,885...11,709,594
Ensembl chr26:11,696,565...11,708,918 		JBrowse link
G TBX6 T-box transcription factor 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:18,093,201...18,098,592
Ensembl chr 6:18,093,189...18,097,636 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:13,886,869...13,946,480
Ensembl chr23:13,889,000...13,977,636 		JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO (PMID:20178780) MGI PMID:20178780 NCBI chr26:6,039,046...6,047,490
Ensembl chr26:6,039,405...6,047,459 		JBrowse link
G UCP3 uncoupling protein 3 acts_upstream_of_or_within ISO (PMID:19004860) MGI PMID:19004860 NCBI chr21:24,272,522...24,290,304
Ensembl chr21:24,277,896...24,288,639 		JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 involved_in ISO (MGI:2157686|PMID:11440971) UniProt PMID:11440971 MGI:2157686 NCBI chr38:21,822,873...21,824,537 JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16291790) Ensembl
MGI		 PMID:16291790 GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19795512) Ensembl
MGI		 PMID:19795512 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
G ZIC3 Zic family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16496285)
(PMID:15384171)		 Ensembl
MGI		 PMID:15384171 PMID:16496285 GO_REF:0000107 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597 		JBrowse link
hemangioblast cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15677567), (PMID:18550854)
(PMID:19182774)		 Ensembl
MGI		 PMID:15677567 PMID:18550854 PMID:19182774 GO_REF:0000107 NCBI chr15:13,446,752...13,462,038
Ensembl chr15:13,449,481...13,462,047 		JBrowse link
ingression involved in gastrulation with mouth forming second term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRB2 crumbs cell polarity complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:59,427,661...59,450,436
Ensembl chr 9:59,427,569...59,450,434 		JBrowse link
initiation of neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113 		JBrowse link
inner cell mass cellular morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LATS1 large tumor suppressor kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23824537) Ensembl
MGI		 PMID:23824537 GO_REF:0000107 NCBI chr 1:40,430,096...40,475,193
Ensembl chr 1:40,260,064...40,457,609 		JBrowse link
G LATS2 large tumor suppressor kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23824537) Ensembl
MGI		 PMID:23824537 GO_REF:0000107 NCBI chr25:17,110,620...17,169,826
Ensembl chr25:17,110,637...17,169,291 		JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21146513) Ensembl
MGI		 PMID:21146513 GO_REF:0000107 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124 		JBrowse link
inner ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABR ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:11921339) MGI PMID:11921339 NCBI chr 9:44,634,117...44,821,454
Ensembl chr 9:44,681,411...44,819,249 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23536097) Ensembl
MGI		 PMID:23536097 GO_REF:0000107 NCBI chr 3:40,130,904...40,168,686
Ensembl chr 3:40,132,726...40,168,664 		JBrowse link
G ATOH1 atonal bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16145671)
(PMID:15543141)		 Ensembl
MGI		 PMID:15543141 PMID:16145671 GO_REF:0000107 NCBI chr32:16,807,217...16,809,294
Ensembl chr32:16,807,336...16,808,406 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474 		JBrowse link
G ATP6V1B1 ATPase H+ transporting V1 subunit B1 NOT|involved_in ISO
IEA		 (MGI:2669353|PMID:12782355) UniProt
Ensembl		 PMID:12782355 GO_REF:0000107 MGI:2669353 NCBI chr10:69,261,311...69,287,540
Ensembl chr10:69,252,926...69,287,542 		JBrowse link
G BCR BCR activator of RhoGEF and GTPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11921339) Ensembl
MGI		 PMID:11921339 GO_REF:0000107 NCBI chr26:27,856,280...27,980,923
Ensembl chr26:27,856,082...27,978,318 		JBrowse link
G CDH23 cadherin related 23 acts_upstream_of_or_within ISO (PMID:15925194)
(PMID:7610888)		 MGI PMID:7610888 PMID:15925194 MGI:61210 NCBI chr 4:22,206,972...22,570,875
Ensembl chr 4:22,207,001...22,571,131 		JBrowse link
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12842012) Ensembl
MGI		 PMID:12842012 GO_REF:0000107 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15353999) Ensembl
MGI		 PMID:15353999 GO_REF:0000107 NCBI chr29:11,115,865...11,284,713
Ensembl chr29:11,156,340...11,283,627 		JBrowse link
G CHRNA10 cholinergic receptor nicotinic alpha 10 subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18077337) Ensembl
MGI		 PMID:18077337 GO_REF:0000107 NCBI chr21:26,216,862...26,233,226 JBrowse link
G CHRNA9 cholinergic receptor nicotinic alpha 9 subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18077337) Ensembl
MGI		 PMID:18077337 GO_REF:0000107 NCBI chr 3:72,190,431...72,204,092
Ensembl chr 3:72,190,555...72,203,404 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:1952599) Ensembl
MGI		 PMID:1952599 GO_REF:0000107 NCBI chr 6:47,425,387...47,622,189
Ensembl chr 6:47,425,307...47,621,012 		JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9165353) Ensembl
MGI		 PMID:9165353 GO_REF:0000107 NCBI chr27:6,756,994...6,787,733
Ensembl chr27:6,756,994...6,787,733 		JBrowse link
G DLX5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16900517)
(PMID:12142028)		 Ensembl
MGI		 PMID:12142028 PMID:16900517 GO_REF:0000107 NCBI chr14:22,080,351...22,085,188
Ensembl chr14:22,080,699...22,084,867 		JBrowse link
G DLX6 distal-less homeobox 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16900517) Ensembl
MGI		 PMID:16900517 GO_REF:0000107 NCBI chr14:22,067,253...22,086,284
Ensembl chr14:22,067,149...22,220,799 		JBrowse link
G EPHB2 EPH receptor B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16916509)
(PMID:10471511)
(PMID:15817220)		 Ensembl
MGI		 PMID:10471511 PMID:15817220 PMID:16916509 GO_REF:0000107 NCBI chr29:20,176,306...20,595,131
Ensembl chr29:20,177,014...20,525,653 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16691564)
(PMID:11062007)		 Ensembl
MGI		 PMID:11062007 PMID:16691564 GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192 		JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15809037) Ensembl
MGI		 PMID:15809037 GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G FGF9 fibroblast growth factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15328018) Ensembl
MGI		 PMID:15328018 GO_REF:0000107 NCBI chr25:16,630,321...16,665,935
Ensembl chr25:16,632,812...16,663,550 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12194867) Ensembl
MGI		 PMID:12194867 GO_REF:0000107 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:10934262) UniProt
MGI		 PMID:10934262 GO_REF:0000024 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
G FOXG1 forkhead box G1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16691564) Ensembl
MGI		 PMID:16691564 GO_REF:0000107 NCBI chr 8:8,276,300...8,279,785 JBrowse link
G FOXI1 forkhead box I1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12642503) Ensembl
MGI		 PMID:12642503 GO_REF:0000107 NCBI chr 4:41,760,899...41,764,887
Ensembl chr 4:41,761,016...41,764,836 		JBrowse link
G FRZB frizzled related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18991062) Ensembl
MGI		 PMID:18991062 GO_REF:0000107 NCBI chr36:25,884,557...25,907,436
Ensembl chr36:25,884,557...25,907,369 		JBrowse link
G FZD3 frizzled class receptor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16495441) Ensembl
MGI		 PMID:16495441 GO_REF:0000107 NCBI chr25:28,969,126...29,075,763
Ensembl chr25:28,952,477...29,075,851 		JBrowse link
G FZD6 frizzled class receptor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16495441) Ensembl
MGI		 PMID:16495441 GO_REF:0000107 NCBI chr13:4,732,541...4,771,294
Ensembl chr13:4,733,017...4,772,115 		JBrowse link
G GATA2 GATA binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20652952) Ensembl
MGI		 PMID:20652952 GO_REF:0000107 NCBI chr20:2,472,251...2,488,380
Ensembl chr20:2,473,912...2,480,991 		JBrowse link
G GATA3 GATA binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21553382)
(PMID:11135239)		 Ensembl
MGI		 PMID:11135239 PMID:21553382 GO_REF:0000107 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760 		JBrowse link
G GBX2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15829521), (PMID:15996652) Ensembl
MGI		 PMID:15829521 PMID:15996652 GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512 		JBrowse link
G GFI1 growth factor independent 1 transcriptional repressor acts_upstream_of_or_within ISO (PMID:12441305) MGI PMID:12441305 NCBI chr 6:56,473,032...56,484,422
Ensembl chr 6:56,256,305...56,484,422 		JBrowse link
G HMX2 H6 family homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15363417)
(PMID:11748138)		 Ensembl
MGI		 PMID:11748138 PMID:15363417 GO_REF:0000107 NCBI chr28:32,679,585...32,687,972
Ensembl chr28:32,679,579...32,687,982 		JBrowse link
G HMX3 H6 family homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9435283)
(PMID:15363417)		 Ensembl
MGI		 PMID:9435283 PMID:15363417 GO_REF:0000107 NCBI chr28:32,673,652...32,676,700
Ensembl chr28:32,674,213...32,675,232 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:15367676) MGI PMID:15367676 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G INSIG1 insulin induced gene 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16955138) Ensembl
MGI		 PMID:16955138 GO_REF:0000107 NCBI chr16:18,260,456...18,271,855
Ensembl chr16:18,259,935...18,271,378 		JBrowse link
G INSIG2 insulin induced gene 2 acts_upstream_of_or_within ISO (PMID:16955138) MGI PMID:16955138 NCBI chr19:31,796,984...31,811,556
Ensembl chr19:31,791,710...31,811,386 		JBrowse link
G ITGA8 integrin subunit alpha 8 acts_upstream_of_or_within ISO (PMID:10742111) MGI PMID:10742111 NCBI chr 2:21,034,630...21,244,304
Ensembl chr 2:21,075,653...21,241,951 		JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:46,554,390...46,830,533
Ensembl chr18:46,518,908...46,830,043 		JBrowse link
G KCNQ4 potassium voltage-gated channel subfamily Q member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16437162) Ensembl
MGI		 PMID:16437162 GO_REF:0000107 NCBI chr15:2,203,938...2,257,152
Ensembl chr15:2,205,276...2,242,093 		JBrowse link
G MAFB MAF bZIP transcription factor B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16325169) Ensembl
MGI		 PMID:16325169 GO_REF:0000107 NCBI chr24:28,769,904...28,772,519
Ensembl chr24:28,770,944...28,774,948 		JBrowse link
G MYO15A myosin XVA acts_upstream_of_or_within ISO (PMID:11718241), (PMID:14724386) MGI PMID:11718241 PMID:14724386 NCBI chr 5:41,369,484...41,421,303
Ensembl chr 5:41,370,509...41,392,881 		JBrowse link
G MYO6 myosin VI involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7493015) TreeGrafter
MGI		 PMID:7493015 GO_REF:0000118 NCBI chr12:37,359,200...37,502,342
Ensembl chr12:37,413,570...37,500,724 		JBrowse link
G MYO7A myosin VIIA involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:5795329)
(PMID:15389316)
(PMID:11753415)		 Ensembl
MGI		 PMID:5795329 PMID:11753415 PMID:15389316 GO_REF:0000107 NCBI chr21:21,539,735...21,624,063
Ensembl chr21:21,539,785...21,624,279 		JBrowse link
G NEUROG1 neurogenin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16145671) Ensembl
MGI		 PMID:16145671 GO_REF:0000107 NCBI chr11:23,563,128...23,564,819
Ensembl chr11:23,563,803...23,564,543 		JBrowse link
G NR4A3 nuclear receptor subfamily 4 group A member 3 acts_upstream_of_or_within ISO (PMID:11784868) MGI PMID:11784868 NCBI chr11:56,806,506...56,846,997
Ensembl chr11:56,812,804...56,847,689 		JBrowse link
G NTN1 netrin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17616930) Ensembl
MGI		 PMID:17616930 GO_REF:0000107 NCBI chr 5:33,654,723...33,825,832
Ensembl chr 5:33,637,142...33,825,899 		JBrowse link
G OTOP1 otopetrin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12651873) Ensembl
MGI
TreeGrafter		 PMID:12651873 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:69,639,550...69,665,051
Ensembl chr 3:69,640,492...69,649,201 		JBrowse link
G OTX1 orthodenticle homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10225993) Ensembl
MGI		 PMID:10225993 GO_REF:0000107 NCBI chr10:62,830,515...62,836,449
Ensembl chr10:62,830,187...62,837,172 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:10225993) MGI PMID:10225993 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446 		JBrowse link
G PAX2 paired box 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:4822275|PMID:20727173)
(PMID:15242798)
(PMID:16916509)
(MGI:84247|PMID:8951055)		 UniProt
MGI
DFLAT		 PMID:8951055 PMID:15242798 PMID:16916509 PMID:20727173 MGI:4822275 MGI:84247 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094 		JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:37,307,130...37,331,729
Ensembl chr17:37,306,033...37,363,178 		JBrowse link
G POU4F3 POU class 4 homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12585968) Ensembl
MGI		 PMID:12585968 GO_REF:0000107 NCBI chr 2:40,762,499...40,764,131
Ensembl chr 2:40,762,477...40,765,161 		JBrowse link
G PRRX1 paired related homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9729491) Ensembl
MGI		 PMID:9729491 GO_REF:0000107 NCBI chr 7:28,065,570...28,138,734
Ensembl chr 7:28,068,711...28,138,787 		JBrowse link
G PRRX2 paired related homeobox 2 acts_upstream_of_or_within ISO (PMID:9729491) MGI PMID:9729491 NCBI chr 9:54,089,046...54,112,595
Ensembl chr 9:54,093,163...54,096,348 		JBrowse link
G PTPRQ protein tyrosine phosphatase receptor type Q involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14534255) Ensembl
MGI		 PMID:14534255 GO_REF:0000107 NCBI chr15:22,771,653...23,017,694
Ensembl chr15:22,825,348...23,013,762 		JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 acts_upstream_of_or_within ISO (PMID:18606138) MGI PMID:18606138 NCBI chr 1:95,209,122...95,280,956
Ensembl chr 1:95,088,745...95,280,151 		JBrowse link
G SDHAF3 succinate dehydrogenase complex assembly factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:22,153,377...22,221,918 JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15788460) Ensembl
MGI		 PMID:15788460 GO_REF:0000107 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534 		JBrowse link
G SIX4 SIX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15788460) Ensembl
MGI		 PMID:15788460 GO_REF:0000107 NCBI chr 8:35,735,893...35,748,976
Ensembl chr 8:35,737,058...35,748,893 		JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 acts_upstream_of_or_within ISO (PMID:19936227) MGI PMID:19936227 NCBI chr22:37,911,533...37,918,273
Ensembl chr22:37,912,612...37,925,177 		JBrowse link
G SOBP sine oculis binding protein homolog involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16962269) Ensembl
MGI
TreeGrafter		 PMID:16962269 GO_REF:0000107 GO_REF:0000118 NCBI chr12:64,653,814...64,794,144
Ensembl chr12:64,664,288...64,794,358 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:15846349) MGI PMID:15846349 NCBI chr34:14,853,000...14,855,153 JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within ISO (PMID:15809037) MGI PMID:15809037 NCBI chr22:33,366,139...33,371,102
Ensembl chr22:33,366,931...33,367,878 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:16600992)
(PMID:12913075)
(PMID:15084464)
(PMID:15652707)		 MGI PMID:12913075 PMID:15084464 PMID:15652707 PMID:16600992 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:11,694,885...11,709,594
Ensembl chr26:11,696,565...11,708,918 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISO (PMID:21204207) UniProt PMID:21204207 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
G TIFAB TIFA inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:23,492,317...23,495,825
Ensembl chr11:23,492,867...23,493,352 		JBrowse link
G TMIE transmembrane inner ear involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12140191) Ensembl
MGI
TreeGrafter		 PMID:12140191 GO_REF:0000107 GO_REF:0000118 NCBI chr20:42,052,607...42,061,424
Ensembl chr20:42,053,817...42,061,262 		JBrowse link
G USH1C USH1 protein network component harmonin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14519688) TreeGrafter
MGI		 PMID:14519688 GO_REF:0000118 NCBI chr21:40,055,786...40,100,685
Ensembl chr21:40,055,730...40,101,430 		JBrowse link
G USH1G USH1 protein network component sans involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12588793), (PMID:1927362) Ensembl
MGI		 PMID:1927362 PMID:12588793 GO_REF:0000107 NCBI chr 9:5,527,935...5,532,940
Ensembl chr 9:5,528,492...5,533,900 		JBrowse link
G WNT1 Wnt family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15961523) Ensembl
MGI		 PMID:15961523 GO_REF:0000107 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060 		JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15961523) Ensembl
MGI		 PMID:15961523 GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18991062) Ensembl
MGI		 PMID:18991062 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
intermediate mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
labyrinthine layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ESX1 ESX homeobox 1 acts_upstream_of_or_within ISO (PMID:9806555) MGI PMID:9806555 NCBI chr  X:77,608,014...77,612,715
Ensembl chr  X:77,608,016...77,612,784 		JBrowse link
G GJB5 gap junction protein beta 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17961533) Ensembl
MGI		 PMID:17961533 GO_REF:0000107 NCBI chr15:7,196,720...7,199,652 JBrowse link
G NCOA1 nuclear receptor coactivator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20685850) Ensembl
MGI		 PMID:20685850 GO_REF:0000107 NCBI chr17:18,880,676...19,124,300
Ensembl chr17:18,880,383...19,122,258 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO (PMID:20685850) MGI PMID:20685850 Ensembl chr24:34,585,305...34,728,674
Ensembl chr24:34,585,305...34,728,674 		JBrowse link
lateral mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXF1 forkhead box F1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11124112) Ensembl
MGI		 PMID:11124112 GO_REF:0000107 NCBI chr 5:66,343,776...66,347,785
Ensembl chr 5:66,345,150...66,347,935 		JBrowse link
G TAF10 TATA-box binding protein associated factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,917,941...29,919,347
Ensembl chr21:29,917,947...29,919,330 		JBrowse link
lens placode formation involved in camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15569927) Ensembl
MGI		 PMID:15569927 GO_REF:0000107 NCBI chr10:11,445,843...11,552,325
Ensembl chr10:11,539,994...11,552,890 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19686689)
(PMID:19805295)		 Ensembl
MGI		 PMID:19686689 PMID:19805295 GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G WNT2 Wnt family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19686689) Ensembl
MGI		 PMID:19686689 GO_REF:0000107 NCBI chr14:56,123,735...56,172,113
Ensembl chr14:56,129,248...56,172,069 		JBrowse link
G WNT2B Wnt family member 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19686689) Ensembl
MGI		 PMID:19686689 GO_REF:0000107 NCBI chr17:63,034,719...63,054,369
Ensembl chr17:63,035,883...63,047,956 		JBrowse link
mammary gland bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11782400) Ensembl
MGI		 PMID:11782400 GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:11782400) UniProt
MGI		 PMID:11782400 GO_REF:0000024 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACCS 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:45,141,870...45,159,255
Ensembl chr18:45,142,586...45,159,255 		JBrowse link
G ACVR1 activin A receptor type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10479450)
(PMID:17117439)		 Ensembl
MGI		 PMID:10479450 PMID:17117439 GO_REF:0000107 NCBI chr36:3,743,257...3,818,659
Ensembl chr36:3,744,163...3,818,652 		JBrowse link
G AHDC1 AT-hook DNA binding motif containing 1 involved_in ISO (PMID:35585237)
(MGI:7294317|PMID:35585237)		 UniProt PMID:35585237 MGI:7294317 NCBI chr 2:72,711,626...72,762,802
Ensembl chr 2:72,747,701...72,752,605 		JBrowse link
G ARMC5 armadillo repeat containing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28911199) Ensembl
MGI		 PMID:28911199 GO_REF:0000107 NCBI chr 6:16,782,732...16,789,490
Ensembl chr 6:16,781,860...16,788,878 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18462699), (PMID:7799920) Ensembl
MGI		 PMID:7799920 PMID:18462699 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15843411) Ensembl
MGI		 PMID:15843411 GO_REF:0000107 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17699604) Ensembl
MGI		 PMID:17699604 GO_REF:0000107 NCBI chr 4:34,499,898...34,582,481
Ensembl chr 4:34,517,492...34,578,923 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10772805) Ensembl
MGI		 PMID:10772805 GO_REF:0000107 NCBI chr37:11,342,292...11,540,199
Ensembl chr37:11,342,384...11,533,024 		JBrowse link
G CHRD chordin acts_upstream_of_or_within ISO (PMID:12810603) MGI PMID:12810603 NCBI chr34:17,255,770...17,264,776
Ensembl chr34:17,255,562...17,271,713 		JBrowse link
G CRB2 crumbs cell polarity complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:59,427,661...59,450,436
Ensembl chr 9:59,427,569...59,450,434 		JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (PMID:18462699) MGI PMID:18462699 NCBI chr26:35,697,428...35,701,596
Ensembl chr26:35,697,618...35,701,496 		JBrowse link
G ECSIT ECSIT signaling integrator acts_upstream_of_or_within ISO (PMID:14633973) MGI PMID:14633973 NCBI chr20:49,848,848...49,867,075
Ensembl chr20:49,848,912...49,867,066 		JBrowse link
G EOMES eomesodermin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10716450) TreeGrafter
MGI		 PMID:10716450 GO_REF:0000118 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527 		JBrowse link
G ETV2 ETS variant transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18462699) Ensembl
MGI		 PMID:18462699 GO_REF:0000107 NCBI chr 1:116,971,238...116,974,831
Ensembl chr 1:116,971,365...116,985,796 		JBrowse link
G EXT2 exostosin glycosyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16236767) Ensembl
MGI		 PMID:16236767 GO_REF:0000107 NCBI chr18:44,987,310...45,122,339
Ensembl chr18:44,987,748...45,129,974 		JBrowse link
G GPI glucose-6-phosphate isomerase acts_upstream_of_or_within ISO (PMID:8922529) MGI PMID:8922529 NCBI chr 1:117,922,380...117,948,325
Ensembl chr 1:117,922,635...117,948,316 		JBrowse link
G HAND1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9500550) Ensembl
MGI		 PMID:9500550 GO_REF:0000107 NCBI chr 4:55,231,061...55,234,640
Ensembl chr 4:55,231,481...55,234,265 		JBrowse link
G INHBA inhibin subunit beta A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7799920) Ensembl
MGI		 PMID:7799920 GO_REF:0000107 NCBI chr18:8,272,978...8,288,432
Ensembl chr18:8,272,872...8,283,794 		JBrowse link
G MACF1 microtubule actin crosslinking factor 1 acts_upstream_of_or_within ISO (PMID:16815997) MGI PMID:16815997 NCBI chr15:3,361,887...3,703,891
Ensembl chr15:3,362,867...3,573,325 		JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:52,738,333...52,739,962
Ensembl chr 3:52,738,366...52,739,755 		JBrowse link
G MESP2 mesoderm posterior bHLH transcription factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:52,757,581...52,759,987
Ensembl chr 3:52,756,836...52,760,004 		JBrowse link
G MSGN1 mesogenin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:13,266,674...13,267,968
Ensembl chr17:13,266,674...13,267,240 		JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9171370) Ensembl
MGI		 PMID:9171370 GO_REF:0000107 NCBI chr26:22,816,869...22,896,103
Ensembl chr26:22,816,551...22,894,196 		JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:11311163) MGI PMID:11311163 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151 		JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18462699) Ensembl
MGI		 PMID:18462699 GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NR4A3 nuclear receptor subfamily 4 group A member 3 acts_upstream_of_or_within ISO (PMID:13129926) MGI PMID:13129926 NCBI chr11:56,806,506...56,846,997
Ensembl chr11:56,812,804...56,847,689 		JBrowse link
G POFUT2 protein O-fucosyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20637190) Ensembl
MGI		 PMID:20637190 GO_REF:0000107 NCBI chr31:38,813,252...38,821,656
Ensembl chr31:38,813,255...38,818,734 		JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12004056) Ensembl
MGI		 PMID:12004056 GO_REF:0000107 NCBI chr20:48,416,730...48,425,237
Ensembl chr20:48,409,045...48,426,669 		JBrowse link
G PRKAR1A protein kinase cAMP-dependent type I regulatory subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12004056) Ensembl
MGI		 PMID:12004056 GO_REF:0000107 NCBI chr 9:15,180,940...15,203,035
Ensembl chr 9:15,181,393...15,200,683 		JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:1343990|PMID:10477299) UniProt PMID:10477299 MGI:1343990 NCBI chr13:37,701,781...37,704,949
Ensembl chr13:37,703,232...37,704,657 		JBrowse link
G SFT2D2 SFT2 domain containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:30,258,748...30,281,371 JBrowse link
G SMAD2 SMAD family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15084457) Ensembl
MGI		 PMID:15084457 GO_REF:0000107 NCBI chr 7:43,696,883...43,778,063
Ensembl chr 7:43,700,445...43,769,983 		JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15084457) Ensembl
MGI		 PMID:15084457 GO_REF:0000107 NCBI chr30:31,246,313...31,360,098
Ensembl chr30:31,245,657...31,363,337 		JBrowse link
G SNAI1 snail family transcriptional repressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:36,498,343...36,503,623
Ensembl chr24:36,498,062...36,503,628 		JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11060034), (PMID:9799237) Ensembl
MGI		 PMID:9799237 PMID:11060034 GO_REF:0000107 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533 		JBrowse link
G TBX19 T-box transcription factor 19 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:30,198,912...30,248,410
Ensembl chr 7:30,185,850...30,365,512 		JBrowse link
G TBX6 T-box transcription factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755804)
(PMID:9490412)		 Ensembl
MGI		 PMID:9490412 PMID:15755804 GO_REF:0000107 NCBI chr 6:18,093,201...18,098,592
Ensembl chr 6:18,093,189...18,097,636 		JBrowse link
G TBXT T-box transcription factor T involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:54,183,495...54,192,331
Ensembl chr 1:54,183,153...54,192,352 		JBrowse link
G TIPRL TOR signaling pathway regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:30,291,330...30,329,317
Ensembl chr 7:30,185,850...30,365,512 		JBrowse link
G TLX2 T cell leukemia homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9550720) Ensembl
MGI		 PMID:9550720 GO_REF:0000107 NCBI chr17:48,625,008...48,627,085
Ensembl chr17:48,625,632...48,627,052 		JBrowse link
G TWSG1 twisted gastrulation BMP signaling modulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15843411) Ensembl
MGI		 PMID:15843411 GO_REF:0000107 NCBI chr 7:75,337,347...75,397,485
Ensembl chr 7:75,335,235...75,398,325 		JBrowse link
G TXNRD1 thioredoxin reductase 1 acts_upstream_of_or_within ISO (PMID:17697936) MGI PMID:17697936 NCBI chr10:33,904,065...34,021,549
Ensembl chr10:33,886,343...34,021,696 		JBrowse link
G WLS Wnt ligand secretion mediator involved_in ISO (MGI:4397730|PMID:19841259) UniProt PMID:19841259 MGI:4397730 NCBI chr 6:77,053,242...77,146,549
Ensembl chr 6:77,053,237...77,317,761 		JBrowse link
G WNT3 Wnt family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10431240) Ensembl
MGI		 PMID:10431240 GO_REF:0000107 NCBI chr 9:10,073,019...10,124,454
Ensembl chr 9:10,077,567...10,124,508 		JBrowse link
mesoderm migration involved in gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18794329) Ensembl
MGI		 PMID:18794329 GO_REF:0000107 NCBI chr19:29,916,994...30,063,243
Ensembl chr19:29,921,636...30,063,216 		JBrowse link
G TBXT T-box transcription factor T involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7720590) Ensembl
MGI		 PMID:7720590 GO_REF:0000107 NCBI chr 1:54,183,495...54,192,331
Ensembl chr 1:54,183,153...54,192,352 		JBrowse link
mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7799920) Ensembl
MGI		 PMID:7799920 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISO RGD PMID:7803853 RGD:632663 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
G FOXF1 forkhead box F1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17881493) Ensembl
MGI		 PMID:17881493 GO_REF:0000107 NCBI chr 5:66,343,776...66,347,785
Ensembl chr 5:66,345,150...66,347,935 		JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,348,101...8,491,435 JBrowse link
G INHBA inhibin subunit beta A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7799920) Ensembl
MGI		 PMID:7799920 GO_REF:0000107 NCBI chr18:8,272,978...8,288,432
Ensembl chr18:8,272,872...8,283,794 		JBrowse link
G ITGA2 integrin subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:62,170,137...62,268,962
Ensembl chr 4:62,170,452...62,268,983 		JBrowse link
G ITGA3 integrin subunit alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:26,065,792...26,095,649
Ensembl chr 9:26,062,393...26,094,422 		JBrowse link
G ITGA8 integrin subunit alpha 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:21,034,630...21,244,304
Ensembl chr 2:21,075,653...21,241,951 		JBrowse link
G ITGB1 integrin subunit beta 1 involved_in ISO (PMID:23154389) UniProt PMID:23154389 NCBI chr 2:3,728,472...3,757,696
Ensembl chr 2:3,670,596...3,756,961 		JBrowse link
G ITGB3 integrin subunit beta 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:9,179,667...9,231,061
Ensembl chr 9:9,182,562...9,231,451 		JBrowse link
G ITGB4 integrin subunit beta 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,825,148...4,855,266
Ensembl chr 9:4,825,292...4,855,820 		JBrowse link
G KDM6A lysine demethylase 6A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22949634) Ensembl
MGI		 PMID:22949634 GO_REF:0000107 NCBI chr  X:38,745,854...38,964,029
Ensembl chr  X:38,745,854...38,959,842 		JBrowse link
G KDM6B lysine demethylase 6B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,689,000...32,711,026
Ensembl chr 5:32,696,211...32,710,666 		JBrowse link
G MIR145 microRNA mir-145 involved_in ISO (PMID:19409607) BHF-UCL PMID:19409607 NCBI chr 4:59,533,128...59,533,210
Ensembl chr 4:59,533,128...59,533,210 		JBrowse link
mesodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NANOG Nanog homeobox acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:16801560) MGI PMID:16801560 NCBI chr27:37,262,558...37,266,449 JBrowse link
G POU5F1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:10742100) MGI PMID:10742100
G SMAD1 SMAD family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16801560) Ensembl
MGI		 PMID:16801560 GO_REF:0000107 NCBI chr15:44,093,491...44,171,177
Ensembl chr15:44,095,497...44,170,098 		JBrowse link
mesodermal cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7657163) Ensembl
MGI		 PMID:7657163 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:20,176,306...20,595,131
Ensembl chr29:20,177,014...20,525,653 		JBrowse link
G HOXA11 homeobox A11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:40,355,907...40,360,120
Ensembl chr14:40,357,478...40,359,919 		JBrowse link
G PAX2 paired box 2 involved_in ISO (MGI:3768605|PMID:17785448) UniProt PMID:17785448 MGI:3768605 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094 		JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of ISO (PMID:17462603) MGI PMID:17462603 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765 		JBrowse link
G SIX2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:47,399,152...47,403,503
Ensembl chr10:47,400,034...47,403,509 		JBrowse link
G TBX6 T-box transcription factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9490412) Ensembl
MGI		 PMID:9490412 GO_REF:0000107 NCBI chr 6:18,093,201...18,098,592
Ensembl chr 6:18,093,189...18,097,636 		JBrowse link
mesodermal to mesenchymal transition involved in gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EOMES eomesodermin involved_in ISO (MGI:3772748|PMID:18171685) UniProt PMID:18171685 MGI:3772748 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527 		JBrowse link
G TASOR transcription activation suppressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:33,665,231...33,713,264
Ensembl chr20:33,646,000...33,712,936 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25813538) Ensembl
MGI		 PMID:25813538 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
mesonephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20040500) Ensembl
MGI		 PMID:20040500 GO_REF:0000107 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993 		JBrowse link
G MIR216A microRNA mir-216a involved_in ISO (PMID:31367007) MGI PMID:31367007 NCBI chr10:56,761,430...56,761,534
Ensembl chr10:56,761,430...56,761,534 		JBrowse link
G MIR216B microRNA mir-216b involved_in ISO (PMID:31367007) MGI PMID:31367007 NCBI chr10:56,772,853...56,772,914
Ensembl chr10:56,772,853...56,772,914 		JBrowse link
G MIR217 microRNA mir-217 involved_in ISO (PMID:31367007) MGI PMID:31367007 NCBI chr10:56,754,566...56,754,647
Ensembl chr10:56,754,566...56,754,647 		JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16054034) Ensembl
MGI		 PMID:16054034 GO_REF:0000107 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654 		JBrowse link
mesonephric tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISO (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094 		JBrowse link
G SIX1 SIX homeobox 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534 		JBrowse link
metanephric nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094 		JBrowse link
G PAX8 paired box 8 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:37,307,130...37,331,729
Ensembl chr17:37,306,033...37,363,178 		JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21212101) Ensembl
MGI		 PMID:21212101 GO_REF:0000107 NCBI chr 6:39,667,941...39,672,716
Ensembl chr 6:39,668,232...39,672,638 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:21212101) UniProt
MGI
Ensembl		 PMID:21212101 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172 		JBrowse link
midbrain-hindbrain boundary morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBX2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16651541) Ensembl
MGI		 PMID:16651541 GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11500373) Ensembl
MGI		 PMID:11500373 GO_REF:0000107
G HES3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO (PMID:11522634) MGI PMID:11522634 NCBI chr 5:60,134,351...60,136,924
Ensembl chr 5:60,135,918...60,136,924 		JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113 		JBrowse link
middle ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EDN1 endothelin 1 acts_upstream_of_or_within ISO (PMID:8152482) MGI PMID:8152482 NCBI chr35:11,808,892...11,815,383
Ensembl chr35:11,808,892...11,815,383 		JBrowse link
G EDNRA endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:45,823,472...45,878,527
Ensembl chr15:45,823,560...45,876,463 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:27959908) MGI PMID:27959908 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10471511) Ensembl
MGI		 PMID:10471511 GO_REF:0000107 NCBI chr29:20,176,306...20,595,131
Ensembl chr29:20,177,014...20,525,653 		JBrowse link
G EYA4 EYA transcriptional coactivator and phosphatase 4 acts_upstream_of_or_within ISO (PMID:18219393) MGI PMID:18219393 NCBI chr 1:26,208,514...26,514,601
Ensembl chr 1:26,272,448...26,514,201 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15630379) Ensembl
MGI		 PMID:15630379 GO_REF:0000107 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:17525797) MGI PMID:17525797 NCBI chr 1:72,927,346...72,930,119
Ensembl chr 1:72,927,670...72,928,827 		JBrowse link
G GSC goosecoid homeobox involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:63,684,149...63,707,030
Ensembl chr 8:63,684,137...63,707,054 		JBrowse link
G HOXA2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15861402)
(PMID:15634706)
(PMID:16221728)		 Ensembl
MGI		 PMID:15634706 PMID:15861402 PMID:16221728 GO_REF:0000107 NCBI chr14:40,273,992...40,276,975
Ensembl chr14:40,274,469...40,276,239 		JBrowse link
G INSIG1 insulin induced gene 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16955138) Ensembl
MGI		 PMID:16955138 GO_REF:0000107 NCBI chr16:18,260,456...18,271,855
Ensembl chr16:18,259,935...18,271,378 		JBrowse link
G INSIG2 insulin induced gene 2 acts_upstream_of_or_within ISO (PMID:16955138) MGI PMID:16955138 NCBI chr19:31,796,984...31,811,556
Ensembl chr19:31,791,710...31,811,386 		JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16330189) Ensembl
MGI		 PMID:16330189 GO_REF:0000107 NCBI chr 3:70,232,790...70,236,295
Ensembl chr 3:70,232,052...70,236,447 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (PMID:17523175) MGI PMID:17523175 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17712420) Ensembl
MGI		 PMID:17712420 GO_REF:0000107 NCBI chr 9:20,407,296...20,414,094
Ensembl chr 9:20,407,281...20,414,056 		JBrowse link
G NKX3-2 NK3 homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14973294) Ensembl
MGI		 PMID:14973294 GO_REF:0000107 NCBI chr 3:66,543,046...66,546,779
Ensembl chr 3:66,543,046...66,545,580 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:1,019,167...1,031,622
Ensembl chr13:1,023,879...1,031,225 		JBrowse link
G PRKRA protein activator of interferon induced protein kinase EIF2AK2 acts_upstream_of_or_within ISO (PMID:16571658) MGI PMID:16571658 NCBI chr36:22,061,226...22,080,324
Ensembl chr36:22,061,461...22,080,612 		JBrowse link
G PRRX1 paired related homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7758948)
(PMID:9729491)		 Ensembl
MGI		 PMID:7758948 PMID:9729491 GO_REF:0000107 NCBI chr 7:28,065,570...28,138,734
Ensembl chr 7:28,068,711...28,138,787 		JBrowse link
G PRRX2 paired related homeobox 2 acts_upstream_of_or_within ISO (PMID:9729491) MGI PMID:9729491 NCBI chr 9:54,089,046...54,112,595
Ensembl chr 9:54,093,163...54,096,348 		JBrowse link
G RPL38 ribosomal protein L38 acts_upstream_of_or_within ISO (PMID:21062742) MGI PMID:21062742 NCBI chr 9:6,161,862...6,169,705 JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:12874121) UniProt
MGI
Ensembl		 PMID:12874121 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534 		JBrowse link
G SIX2 SIX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15634706) Ensembl
MGI		 PMID:15634706 GO_REF:0000107 NCBI chr10:47,399,152...47,403,503
Ensembl chr10:47,400,034...47,403,509 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:20501333)
(PMID:15652707)
(PMID:16600992)		 MGI PMID:15652707 PMID:16600992 PMID:20501333 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784 		JBrowse link
G TSHZ1 teashirt zinc finger homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17586487) Ensembl
MGI		 PMID:17586487 GO_REF:0000107 NCBI chr 1:4,224,875...4,229,755
Ensembl chr 1:4,226,210...4,246,762 		JBrowse link
morphogenesis of embryonic epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15739227) Ensembl
MGI		 PMID:15739227 GO_REF:0000107 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16102745) Ensembl
MGI		 PMID:16102745 GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:15843416) UniProt
MGI		 PMID:15843416 GO_REF:0000024 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
G GRSF1 G-rich RNA sequence binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15857914) Ensembl
MGI		 PMID:15857914 GO_REF:0000107 NCBI chr13:60,088,198...60,102,292
Ensembl chr13:60,089,429...60,100,099 		JBrowse link
G JAG2 jagged canonical Notch ligand 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16607638) Ensembl
MGI		 PMID:16607638 GO_REF:0000107 NCBI chr 8:72,535,539...72,553,531
Ensembl chr 8:72,535,107...72,550,322 		JBrowse link
G KDF1 keratinocyte differentiation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:73,198,278...73,206,691
Ensembl chr 2:73,197,580...73,207,153 		JBrowse link
G LAMA5 laminin subunit alpha 5 acts_upstream_of_or_within ISO (PMID:16365040) MGI PMID:16365040 NCBI chr24:46,315,008...46,351,279 JBrowse link
G PCDH8 protocadherin 8 acts_upstream_of_or_within ISO (PMID:12591245) MGI PMID:12591245 NCBI chr22:9,860,590...9,865,298
Ensembl chr22:9,860,827...9,865,412 		JBrowse link
G PDX1 pancreatic and duodenal homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8625829) Ensembl
MGI		 PMID:8625829 GO_REF:0000107 NCBI chr25:11,741,863...11,746,885
Ensembl chr25:11,741,863...11,746,885 		JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12499390) Ensembl
MGI		 PMID:12499390 GO_REF:0000107 NCBI chr13:37,356,405...37,374,765
Ensembl chr13:37,356,405...37,374,681 		JBrowse link
G TBX18 T-box transcription factor 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16511601) TreeGrafter
MGI		 PMID:16511601 GO_REF:0000118 NCBI chr12:44,901,076...44,929,730
Ensembl chr12:44,873,119...44,929,205 		JBrowse link
G TGFB1I1 transforming growth factor beta 1 induced transcript 1 acts_upstream_of_or_within ISO (PMID:15687259) MGI PMID:15687259 NCBI chr 6:16,775,438...16,781,695
Ensembl chr 6:16,775,836...16,780,935 		JBrowse link
G VEGFC vascular endothelial growth factor C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14634646) Ensembl
MGI		 PMID:14634646 GO_REF:0000107 NCBI chr16:52,883,242...52,987,684
Ensembl chr16:52,883,139...52,987,563 		JBrowse link
negative regulation of ectodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD7 frizzled class receptor 7 involved_in ISO (PMID:18681827) BHF-UCL PMID:18681827 NCBI chr37:11,054,572...11,061,173
Ensembl chr37:11,053,521...11,060,821 		JBrowse link
negative regulation of endodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL5A1 collagen type V alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:50,706,852...50,856,691
Ensembl chr 9:50,770,277...50,854,728 		JBrowse link
G COL5A2 collagen type V alpha 2 chain involved_in ISO (PMID:23154389) UniProt PMID:23154389 NCBI chr36:30,538,863...30,677,450
Ensembl chr36:30,540,229...30,691,564 		JBrowse link
negative regulation of endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,738,333...52,739,962
Ensembl chr 3:52,738,366...52,739,755 		JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760 		JBrowse link
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760 		JBrowse link
negative regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TBX2 T-box transcription factor 2 involved_in ISO (MGI:3039059|PMID:15042700) BHF-UCL PMID:15042700 MGI:3039059 NCBI chr 9:35,237,323...35,245,066
Ensembl chr 9:35,235,649...35,245,736 		JBrowse link
negative regulation of heterotypic cell-cell adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADIPOQ adiponectin, C1Q and collagen domain containing involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr34:19,398,310...19,410,519
Ensembl chr34:19,354,825...19,409,844 		JBrowse link
G APOA1 apolipoprotein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:16,740,071...16,742,081
Ensembl chr 5:16,740,130...16,741,943 		JBrowse link
G IL10 interleukin 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:5,933,285...5,937,057
Ensembl chr 7:5,933,285...5,937,057 		JBrowse link
G IL1RN interleukin 1 receptor antagonist involved_in ISO (PMID:2139180) BHF-UCL PMID:2139180 NCBI chr17:37,236,690...37,250,424
Ensembl chr17:37,212,751...37,249,329 		JBrowse link
G KLF4 KLF transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,881,840...62,886,676
Ensembl chr11:62,882,767...62,928,251 		JBrowse link
G MAP2K5 mitogen-activated protein kinase kinase 5 involved_in ISO PMID:20551324 BHF-UCL PMID:20551324 RGD:8553940 NCBI chr30:31,665,032...31,920,792
Ensembl chr30:31,664,564...31,920,751 		JBrowse link
G MAPK7 mitogen-activated protein kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:40,831,949...40,836,990
Ensembl chr 5:40,831,947...40,836,505 		JBrowse link
G MBP myelin basic protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:2,841,801...2,952,553
Ensembl chr 1:2,846,589...2,951,860 		JBrowse link
G MIR221 microRNA mir-221 involved_in ISO (PMID:20110463) BHF-UCL PMID:20110463 NCBI chr  X:39,523,890...39,523,951
Ensembl chr  X:39,523,885...39,523,954 		JBrowse link
G MYADM myeloid associated differentiation marker involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:103,315,606...103,322,329 JBrowse link
G WNK1 WNK lysine deficient protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:42,764,184...42,914,591
Ensembl chr27:42,765,181...42,912,806 		JBrowse link
negative regulation of mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:35,697,428...35,701,596
Ensembl chr26:35,697,618...35,701,496 		JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,738,333...52,739,962
Ensembl chr 3:52,738,366...52,739,755 		JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (PMID:17462603) MGI PMID:17462603 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765 		JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19056682) MGI PMID:19056682 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
negative regulation of planar cell polarity pathway involved in pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19056682) MGI PMID:19056682 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
negative regulation of prostatic bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18393306)
(PMID:11401393)		 Ensembl
MGI		 PMID:11401393 PMID:18393306 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16324690) Ensembl
MGI		 PMID:16324690 GO_REF:0000107 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653 		JBrowse link
G SULF1 sulfatase 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr29:18,709,406...18,885,248
Ensembl chr29:18,709,445...18,884,378 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18804104) Ensembl
MGI		 PMID:18804104 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17537789) Ensembl
MGI		 PMID:17537789 GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G WNT6 Wnt family member 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11948913) Ensembl
MGI		 PMID:11948913 GO_REF:0000107 NCBI chr37:25,452,875...25,457,437
Ensembl chr37:25,453,905...25,456,654 		JBrowse link
neural fold bending term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LUZP1 leucine zipper protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18801334) Ensembl
MGI
TreeGrafter		 PMID:18801334 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:76,242,226...76,312,361
Ensembl chr 2:76,242,572...76,309,688 		JBrowse link
neural fold elevation formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP5 bone morphogenetic protein 5 involved_in ISO (MGI:1332253|PMID:10079236) BHF-UCL PMID:10079236 MGI:1332253 NCBI chr12:23,089,429...23,202,176
Ensembl chr12:23,089,459...23,202,348 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10328919) Ensembl
MGI		 PMID:10328919 GO_REF:0000107 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692 		JBrowse link
neural fold formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CECR2 CECR2 histone acetyl-lysine reader involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21246654) Ensembl
MGI		 PMID:21246654 GO_REF:0000107 NCBI chr27:45,125,909...45,193,577
Ensembl chr27:45,125,723...45,188,890 		JBrowse link
G CFL1 cofilin 1 acts_upstream_of_or_within ISO (PMID:15649475) MGI PMID:15649475 NCBI chr18:51,404,649...51,408,240
Ensembl chr18:51,401,659...51,408,212 		JBrowse link
G GATAD2A GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (PMID:17565372) MGI PMID:17565372 NCBI chr20:43,736,471...43,853,505
Ensembl chr20:43,739,849...43,846,370 		JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:11311163) MGI PMID:11311163 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151 		JBrowse link
G OVOL2 ovo like zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16423343) Ensembl
MGI		 PMID:16423343 GO_REF:0000107 NCBI chr24:5,020,608...5,050,487
Ensembl chr24:5,020,813...5,050,309 		JBrowse link
neural plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:7774020) MGI PMID:7774020 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290 		JBrowse link
neural plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18794329)
(PMID:17507402)		 Ensembl
MGI		 PMID:17507402 PMID:18794329 GO_REF:0000107 NCBI chr19:29,916,994...30,063,243
Ensembl chr19:29,921,636...30,063,216 		JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16613831) Ensembl
MGI		 PMID:16613831 GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16712836) Ensembl
MGI		 PMID:16712836 GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G TBXT T-box transcription factor T involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15384171) Ensembl
MGI		 PMID:15384171 GO_REF:0000107 NCBI chr 1:54,183,495...54,192,331
Ensembl chr 1:54,183,153...54,192,352 		JBrowse link
neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9883720) Ensembl
MGI		 PMID:9883720 GO_REF:0000107 NCBI chr 9:53,118,462...53,262,092
Ensembl chr 9:53,119,641...53,261,307 		JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:9883720) MGI PMID:9883720 NCBI chr 7:20,696,659...20,735,362
Ensembl chr 7:20,700,144...20,727,410 		JBrowse link
G ADM adrenomedullin acts_upstream_of_or_within ISO (PMID:16981008) MGI PMID:16981008 NCBI chr21:33,472,197...33,474,472
Ensembl chr21:33,471,623...33,474,495 		JBrowse link
G ALX1 ALX homeobox 1 acts_upstream_of_or_within ISO (PMID:8673125) MGI PMID:8673125 NCBI chr15:26,838,615...26,858,786
Ensembl chr15:26,834,670...26,858,803 		JBrowse link
G APAF1 apoptotic peptidase activating factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11504943), (PMID:9216040) Ensembl
MGI		 PMID:9216040 PMID:11504943 GO_REF:0000107 NCBI chr15:38,026,893...38,160,842
Ensembl chr15:38,028,132...38,114,987 		JBrowse link
G ARHGAP35 Rho GTPase activating protein 35 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11044403) Ensembl
MGI		 PMID:11044403 GO_REF:0000107 NCBI chr 1:108,952,836...109,034,329
Ensembl chr 1:108,952,562...109,034,337 		JBrowse link
G ARID1A AT-rich interaction domain 1A acts_upstream_of_or_within ISO (PMID:23129809) MGI PMID:23129809 NCBI chr 2:73,331,606...73,401,151
Ensembl chr 2:73,324,852...73,401,102 		JBrowse link
G ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16170314) Ensembl
MGI		 PMID:16170314 GO_REF:0000107 NCBI chr30:36,058,932...36,109,206
Ensembl chr30:35,927,233...36,108,381 		JBrowse link
G B9D2 B9 domain containing 2 involved_in ISO (MGI:74339|PMID:7600998) BHF-UCL PMID:7600998 MGI:74339 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G BCL10 BCL10 immune signaling adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:62,712,937...62,723,852
Ensembl chr 6:62,712,971...62,722,368 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19850029) Ensembl
MGI		 PMID:19850029 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G BRD2 bromodomain containing 2 acts_upstream_of_or_within ISO (PMID:19362612) MGI PMID:19362612 NCBI chr12:2,534,034...2,546,029
Ensembl chr12:2,534,034...2,546,029 		JBrowse link
G CC2D2A coiled-coil and C2 domain containing 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24947469) Ensembl
MGI		 PMID:24947469 GO_REF:0000107 NCBI chr 3:64,731,165...64,867,743
Ensembl chr 3:64,731,171...64,867,547 		JBrowse link
G CDK20 cyclin dependent kinase 20 acts_upstream_of_or_within ISO (PMID:28817564) MGI PMID:28817564 NCBI chr 1:97,623,126...97,662,668
Ensembl chr 1:97,622,998...97,662,662 		JBrowse link
G CECR2 CECR2 histone acetyl-lysine reader involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15640247)
(PMID:21246654)
(PMID:20589882)		 Ensembl
MGI		 PMID:15640247 PMID:20589882 PMID:21246654 GO_REF:0000107 NCBI chr27:45,125,909...45,193,577
Ensembl chr27:45,125,723...45,188,890 		JBrowse link
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17229766) Ensembl
MGI		 PMID:17229766 GO_REF:0000107 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12149478) Ensembl
MGI		 PMID:12149478 GO_REF:0000107 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995 		JBrowse link
G CLUAP1 clusterin associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23742838) Ensembl
MGI		 PMID:23742838 GO_REF:0000107 NCBI chr 6:37,708,258...37,746,361
Ensembl chr 6:37,708,089...37,746,398 		JBrowse link
G COBL cordon-bleu WH2 repeat protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14512015) Ensembl
MGI		 PMID:14512015 GO_REF:0000107 NCBI chr18:2,206,957...2,386,333
Ensembl chr18:2,208,260...2,459,206 		JBrowse link
G DEAF1 DEAF1 transcription factor involved_in ISO (MGI:3029622|PMID:14966286) UniProt PMID:14966286 MGI:3029622 NCBI chr18:25,711,683...25,733,144
Ensembl chr18:25,711,706...25,733,069 		JBrowse link
G DLC1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO (PMID:15710412) MGI PMID:15710412 NCBI chr16:36,531,754...36,943,033
Ensembl chr16:36,531,754...36,943,033 		JBrowse link
G DVL2 dishevelled segment polarity protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12421720) Ensembl
MGI		 PMID:12421720 GO_REF:0000107 NCBI chr 5:32,194,326...32,201,922
Ensembl chr 5:32,194,313...32,201,857 		JBrowse link
G ENAH ENAH actin regulator acts_upstream_of_or_within ISO (PMID:15371503)
(PMID:10069337)		 MGI PMID:10069337 PMID:15371503 NCBI chr 7:39,105,024...39,250,126
Ensembl chr 7:39,105,039...39,247,595 		JBrowse link
G FUZ fuzzy planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19877275) Ensembl
MGI		 PMID:19877275 GO_REF:0000107 NCBI chr 1:106,742,381...106,752,543
Ensembl chr 1:106,747,860...106,805,699 		JBrowse link
G FZD3 frizzled class receptor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16495441) Ensembl
MGI		 PMID:16495441 GO_REF:0000107 NCBI chr25:28,969,126...29,075,763
Ensembl chr25:28,952,477...29,075,851 		JBrowse link
G FZD6 frizzled class receptor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16495441) Ensembl
MGI		 PMID:16495441 GO_REF:0000107 NCBI chr13:4,732,541...4,771,294
Ensembl chr13:4,733,017...4,772,115 		JBrowse link
G GLMN glomulin, FKBP associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22405651) Ensembl
MGI		 PMID:22405651 GO_REF:0000107 NCBI chr 6:56,631,186...56,678,397
Ensembl chr 6:56,644,456...56,678,399 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21262862) Ensembl
MGI		 PMID:21262862 GO_REF:0000107 NCBI chr13:3,204,898...3,362,533
Ensembl chr13:3,204,925...3,362,096 		JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:75,290,594...75,324,593
Ensembl chr 2:75,290,596...75,324,496 		JBrowse link
G HECTD1 HECT domain E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:3714713|PMID:17442300)
(PMID:15755804), (PMID:9636176)		 UniProt
MGI		 PMID:9636176 PMID:15755804 PMID:17442300 MGI:3714713 NCBI chr 8:10,399,183...10,493,074
Ensembl chr 8:10,400,604...10,491,247 		JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISO (MGI:3827087|PMID:19000668) UniProt PMID:19000668 MGI:3827087 NCBI chr20:5,644,002...5,716,702
Ensembl chr20:5,644,089...5,715,906 		JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18930042) Ensembl
MGI		 PMID:18930042 GO_REF:0000107 NCBI chr17:21,389,462...21,426,970
Ensembl chr17:21,389,482...21,426,796 		JBrowse link
G IFT57 intraflagellar transport 57 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17027958) Ensembl
MGI		 PMID:17027958 GO_REF:0000107 NCBI chr33:13,432,902...13,486,692
Ensembl chr33:13,410,544...13,486,612 		JBrowse link
G KAT2A lysine acetyltransferase 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17325035) Ensembl
MGI		 PMID:17325035 GO_REF:0000107 NCBI chr 9:20,778,434...20,787,057
Ensembl chr 9:20,779,042...20,787,067 		JBrowse link
G KDM2A lysine demethylase 2A acts_upstream_of_or_within ISO (PMID:25463925) MGI PMID:25463925 NCBI chr18:50,178,511...50,294,097
Ensembl chr18:50,181,024...50,291,127 		JBrowse link
G KDM6A lysine demethylase 6A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22949634) Ensembl
MGI		 PMID:22949634 GO_REF:0000107 NCBI chr  X:38,745,854...38,964,029
Ensembl chr  X:38,745,854...38,959,842 		JBrowse link
G KIF20B kinesin family member 20B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755804) Ensembl
MGI		 PMID:15755804 GO_REF:0000107 NCBI chr28:4,589,691...4,670,335
Ensembl chr28:4,589,434...4,670,164 		JBrowse link
G LHX2 LIM homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11719201) Ensembl
MGI		 PMID:11719201 GO_REF:0000107 NCBI chr 9:58,825,505...58,859,311
Ensembl chr 9:58,825,492...58,845,883 		JBrowse link
G LIAS lipoic acid synthetase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755804) Ensembl
MGI		 PMID:15755804 GO_REF:0000107 NCBI chr 3:72,973,527...72,989,522
Ensembl chr 3:72,949,512...72,989,487 		JBrowse link
G LMO4 LIM domain only 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15691703)
(PMID:14966285)		 Ensembl
MGI		 PMID:14966285 PMID:15691703 GO_REF:0000107 NCBI chr 6:60,892,478...60,909,910
Ensembl chr 6:60,727,270...60,941,058 		JBrowse link
G LOC119876109 vasodilator-stimulated phosphoprotein-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119878551 kunitz-type protease inhibitor 2-like involved_in IEA Ensembl GO_REF:0000107
G LRP2 LDL receptor related protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:13,910,450...14,107,081
Ensembl chr36:13,911,865...14,107,546 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:10545599)
(PMID:19795512)
(PMID:15469977)
(PMID:19653321)
(PMID:19056682)		 MGI PMID:10545599 PMID:15469977 PMID:19056682 PMID:19653321 PMID:19795512 MGI:61254 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G MED12 mediator complex subunit 12 acts_upstream_of_or_within ISO (PMID:20630950) MGI PMID:20630950 NCBI chr  X:55,487,629...55,508,941
Ensembl chr  X:55,482,013...55,509,992 		JBrowse link
G MKS1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23454480)
(PMID:19776033)		 Ensembl
MGI		 PMID:19776033 PMID:23454480 GO_REF:0000107 NCBI chr 9:32,865,972...32,878,712
Ensembl chr 9:32,860,995...32,879,338 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (MGI:5503248|PMID:23704330) BHF-UCL PMID:23704330 MGI:5503248 NCBI chr 8:38,831,672...38,889,607
Ensembl chr 8:38,831,860...38,889,453 		JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:41,316,247...41,495,226
Ensembl chr 1:41,309,419...41,495,216 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase acts_upstream_of
involved_in		 ISO
IEA		 (PMID:25855017), (PMID:29222906) BHF-UCL
Ensembl		 PMID:25855017 PMID:29222906 GO_REF:0000107 NCBI chr 2:84,445,526...84,457,435
Ensembl chr 2:84,380,919...84,536,818 		JBrowse link
G NCKAP1 NCK associated protein 1 acts_upstream_of_or_within ISO (PMID:16831833) MGI PMID:16831833 NCBI chr36:25,965,243...26,054,775
Ensembl chr36:25,965,938...26,054,760 		JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16712836) Ensembl
MGI		 PMID:16712836 GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G OPA1 OPA1 mitochondrial dynamin like GTPase acts_upstream_of_or_within ISO (PMID:15755804) MGI PMID:15755804 NCBI chr23:52,068,123...52,154,410
Ensembl chr23:52,068,118...52,151,593 		JBrowse link
G PAX2 paired box 2 involved_in ISO (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094 		JBrowse link
G PAX3 paired box 3 acts_upstream_of_or_within ISO (PMID:15384171) MGI PMID:15384171 NCBI chr37:28,346,476...28,443,648
Ensembl chr37:28,346,563...28,444,561 		JBrowse link
G PFN1 profilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10069337) Ensembl
MGI		 PMID:10069337 GO_REF:0000107 NCBI chr 5:31,670,483...31,671,891
Ensembl chr 5:31,670,194...31,671,895 		JBrowse link
G PHACTR4 phosphatase and actin regulator 4 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:71,982,524...72,079,916
Ensembl chr 2:71,984,730...72,080,194 		JBrowse link
G PLXNB2 plexin B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:16,949,230...16,975,109
Ensembl chr10:16,963,396...16,974,705 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:11,327,086...11,437,799
Ensembl chr27:11,426,647...11,437,303 		JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22007132) Ensembl
MGI		 PMID:22007132 GO_REF:0000107 NCBI chr20:48,416,730...48,425,237
Ensembl chr20:48,409,045...48,426,669 		JBrowse link
G PRKACB protein kinase cAMP-activated catalytic subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22007132) Ensembl
MGI		 PMID:22007132 GO_REF:0000107 NCBI chr 6:63,615,445...63,729,386
Ensembl chr 6:63,618,323...63,730,146 		JBrowse link
G PTCH1 patched 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9262482) Ensembl
MGI		 PMID:9262482 GO_REF:0000107 NCBI chr 1:71,246,750...71,309,036
Ensembl chr 1:71,238,195...71,305,662 		JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15229603)
(PMID:20704721)		 Ensembl
MGI		 PMID:15229603 PMID:20704721 GO_REF:0000107 NCBI chr12:11,593,017...11,657,149
Ensembl chr12:11,593,043...11,656,320 		JBrowse link
G RAB23 RAB23, member RAS oncogene family involved_in
acts_upstream_of_or_within		 ISO (MGI:69552|PMID:7720556)
(PMID:9636176)		 UniProt
MGI		 PMID:7720556 PMID:9636176 MGI:69552 NCBI chr12:24,388,530...24,438,956
Ensembl chr12:24,387,643...24,421,869 		JBrowse link
G RALA RAS like proto-oncogene A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:10,022,490...10,047,583
Ensembl chr18:10,024,311...10,039,183 		JBrowse link
G RARA retinoic acid receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7607067) Ensembl
MGI		 PMID:7607067 GO_REF:0000107 NCBI chr 9:22,254,803...22,298,614
Ensembl chr 9:22,254,806...22,289,459 		JBrowse link
G RARG retinoic acid receptor gamma involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7607067) Ensembl
MGI		 PMID:7607067 GO_REF:0000107 NCBI chr27:1,958,432...1,978,471
Ensembl chr27:1,958,204...1,978,476 		JBrowse link
G RGMA repulsive guidance molecule BMP co-receptor a involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14749425) Ensembl
MGI		 PMID:14749425 GO_REF:0000107 NCBI chr 3:47,044,342...47,089,923
Ensembl chr 3:47,061,910...47,089,294 		JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 acts_upstream_of_or_within ISO (PMID:17229766) MGI PMID:17229766 NCBI chr17:7,931,786...8,012,484
Ensembl chr17:7,934,739...8,178,707 		JBrowse link
G RPS7 ribosomal protein S7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15384171) Ensembl
MGI		 PMID:15384171 GO_REF:0000107 NCBI chr17:2,139,011...2,143,160
Ensembl chr17:2,138,779...2,143,178 		JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (PMID:16790473) MGI PMID:16790473 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521 		JBrowse link
G SALL4 spalt like transcription factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16790473) Ensembl
MGI		 PMID:16790473 GO_REF:0000107 NCBI chr24:37,941,498...37,959,713
Ensembl chr24:37,940,034...38,037,287 		JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20643356)
(PMID:21515572)		 Ensembl
MGI		 PMID:20643356 PMID:21515572 GO_REF:0000107 NCBI chr13:37,356,405...37,374,765
Ensembl chr13:37,356,405...37,374,681 		JBrowse link
G SDC4 syndecan 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23760952) Ensembl
MGI		 PMID:23760952 GO_REF:0000107 NCBI chr24:32,628,704...32,648,809
Ensembl chr24:32,630,437...32,649,114 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19966784)
(PMID:20215345)		 Ensembl
MGI		 PMID:19966784 PMID:20215345 GO_REF:0000107 NCBI chr32:29,671,702...29,766,628
Ensembl chr32:29,671,738...29,772,192 		JBrowse link
G SEMA4C semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:45,105,701...45,116,504
Ensembl chr10:45,106,666...45,115,592 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20133625) Ensembl
MGI		 PMID:20133625 GO_REF:0000107 NCBI chr20:41,675,539...41,800,697
Ensembl chr20:41,675,599...41,800,612 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19850029) Ensembl
MGI		 PMID:19850029 GO_REF:0000107 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964 		JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (PMID:19850029) MGI PMID:19850029 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765 		JBrowse link
G SHROOM3 shroom family member 3 acts_upstream_of_or_within ISO (PMID:16249236) MGI PMID:16249236 NCBI chr32:1,218,513...1,392,014
Ensembl chr32:1,271,392...1,391,798 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:9284043) MGI PMID:9284043 NCBI chr 5:57,144,178...57,216,385
Ensembl chr 5:57,145,825...57,214,403 		JBrowse link
G SPINT1 serine peptidase inhibitor, Kunitz type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19592578) Ensembl
MGI		 PMID:19592578 GO_REF:0000107 NCBI chr30:7,976,094...7,989,019
Ensembl chr30:7,975,235...7,988,339 		JBrowse link
G SPINT2 serine peptidase inhibitor, Kunitz type 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19592578) Ensembl
MGI		 PMID:19592578 GO_REF:0000107 NCBI chr 1:114,699,050...114,727,802
Ensembl chr 1:114,699,241...114,727,763 		JBrowse link
G ST14 ST14 transmembrane serine protease matriptase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19592578) Ensembl
MGI		 PMID:19592578 GO_REF:0000107 NCBI chr 5:4,652,493...4,666,728
Ensembl chr 5:4,651,863...4,691,069 		JBrowse link
G STIL STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chr15:13,369,292...13,431,677
Ensembl chr15:13,371,925...13,430,951 		JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16155214) Ensembl
MGI		 PMID:16155214 GO_REF:0000107 NCBI chr28:14,992,989...15,115,499
Ensembl chr28:14,992,618...15,112,389 		JBrowse link
G TBXT T-box transcription factor T involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16835439) Ensembl
MGI		 PMID:16835439 GO_REF:0000107 NCBI chr 1:54,183,495...54,192,331
Ensembl chr 1:54,183,153...54,192,352 		JBrowse link
G TEAD2 TEA domain transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17868131) Ensembl
MGI		 PMID:17868131 GO_REF:0000107 NCBI chr 1:107,115,014...107,130,563
Ensembl chr 1:107,115,094...107,131,038 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:8622766), (PMID:9811866) MGI PMID:8622766 PMID:9811866 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISO (MGI:894212|PMID:9217007) BHF-UCL PMID:9217007 MGI:894212 NCBI chr38:13,430,832...13,511,655
Ensembl chr38:13,429,148...13,510,242 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (PMID:17082251) MGI PMID:17082251 NCBI chr 7:70,040,376...70,048,346
Ensembl chr 7:70,040,508...70,047,912 		JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO (PMID:20178780) MGI PMID:20178780 NCBI chr26:6,039,046...6,047,490
Ensembl chr26:6,039,405...6,047,459 		JBrowse link
G TRAF6 TNF receptor associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:31,674,242...31,689,160
Ensembl chr18:31,675,391...31,688,641 		JBrowse link
G TRIM71 tripartite motif containing 71 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19098426) Ensembl
MGI		 PMID:19098426 GO_REF:0000107 NCBI chr23:3,888,287...3,959,910
Ensembl chr23:3,893,647...3,960,411 		JBrowse link
G TSC1 TSC complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11438694) Ensembl
MGI		 PMID:11438694 GO_REF:0000107 NCBI chr 9:51,409,307...51,459,546
Ensembl chr 9:51,425,937...51,454,677 		JBrowse link
G TSC2 TSC complex subunit 2 acts_upstream_of_or_within ISO (PMID:10096549) MGI PMID:10096549 NCBI chr 6:38,865,509...38,898,977
Ensembl chr 6:38,865,507...38,898,960 		JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:19223390) MGI PMID:19223390 NCBI chr27:41,819,574...41,884,198
Ensembl chr27:41,819,455...41,884,097 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7729687) Ensembl
MGI		 PMID:7729687 GO_REF:0000107
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:23760952)
(PMID:21246654)
(PMID:11709546), (PMID:12499390)
(PMID:17229766)
(PMID:14512015)
(PMID:17433286)
(PMID:15229603)
(PMID:19966784)		 MGI PMID:11709546 PMID:12499390 PMID:14512015 PMID:15229603 PMID:17229766 More... NCBI chr38:21,822,873...21,824,537 JBrowse link
G VASP vasodilator stimulated phosphoprotein involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15371503) TreeGrafter
MGI
GO_Central		 PMID:15371503 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:110,050,154...110,063,125
Ensembl chr 1:110,050,154...110,062,827 		JBrowse link
G WDR83 WD repeat domain 83 acts_upstream_of_or_within ISO (PMID:37509073) MGI PMID:37509073 NCBI chr20:49,439,387...49,443,661
Ensembl chr20:49,439,387...49,443,661 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17433286)
(PMID:19795512)		 Ensembl
MGI		 PMID:17433286 PMID:19795512 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:16598713) MGI PMID:16598713 NCBI chr19:46,419,812...46,541,888
Ensembl chr19:46,423,998...46,542,122 		JBrowse link
G ZIC2 Zic family member 2 acts_upstream_of_or_within ISO (PMID:15384171) MGI PMID:15384171 NCBI chr22:49,948,743...49,952,007
Ensembl chr22:49,948,778...49,950,055 		JBrowse link
G ZIC5 Zic family member 5 acts_upstream_of_or_within ISO (PMID:15136147) MGI PMID:15136147 NCBI chr22:49,929,198...49,938,002
Ensembl chr22:49,931,460...49,937,853 		JBrowse link
neural tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRPF1 bromodomain and PHD finger containing 1 acts_upstream_of_or_within ISO (PMID:27528195) MGI PMID:27528195 NCBI chr20:8,493,183...8,508,785
Ensembl chr20:8,493,167...8,506,449 		JBrowse link
G CASP8 caspase 8 acts_upstream_of_or_within ISO (PMID:12404118) MGI PMID:12404118 NCBI chr37:10,362,071...10,402,108
Ensembl chr37:10,391,048...10,401,822 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11694877) Ensembl
MGI		 PMID:11694877 GO_REF:0000107 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995 		JBrowse link
G COQ7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO (PMID:11716496) MGI PMID:11716496 NCBI chr 6:25,912,936...25,922,123
Ensembl chr 6:25,912,954...25,929,655 		JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14603322) Ensembl
MGI		 PMID:14603322 GO_REF:0000107 NCBI chr17:21,389,462...21,426,970
Ensembl chr17:21,389,482...21,426,796 		JBrowse link
G IFT52 intraflagellar transport 52 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15930098) Ensembl
MGI		 PMID:15930098 GO_REF:0000107 NCBI chr24:31,295,987...31,334,825
Ensembl chr24:31,296,015...31,334,808 		JBrowse link
G IPMK inositol polyphosphate multikinase acts_upstream_of_or_within ISO (PMID:15939867) MGI PMID:15939867
G MAP3K7 mitogen-activated protein kinase kinase kinase 7 acts_upstream_of_or_within ISO (PMID:16260493) MGI PMID:16260493 NCBI chr12:49,669,849...49,740,039
Ensembl chr12:49,672,389...49,739,850 		JBrowse link
G MIB1 MIB E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16000382) Ensembl
MGI		 PMID:16000382 GO_REF:0000107 NCBI chr 7:66,173,414...66,289,477
Ensembl chr 7:66,178,594...66,289,491 		JBrowse link
G NUP50 nucleoporin 50 acts_upstream_of_or_within ISO (PMID:10891500) MGI PMID:10891500 NCBI chr10:20,828,879...20,846,539
Ensembl chr10:20,825,574...20,844,617 		JBrowse link
G PTCH1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:71,246,750...71,309,036
Ensembl chr 1:71,238,195...71,305,662 		JBrowse link
G SHH sonic hedgehog signaling molecule ISO RGD PMID:8124714 RGD:69996 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G STK3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19786569) Ensembl
MGI		 PMID:19786569 GO_REF:0000107 NCBI chr13:647,363...920,887
Ensembl chr13:648,216...920,847 		JBrowse link
G STK4 serine/threonine kinase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19786569) Ensembl
MGI		 PMID:19786569 GO_REF:0000107 NCBI chr24:32,375,630...32,463,848
Ensembl chr24:32,375,189...32,521,042 		JBrowse link
G TCTN1 tectonic family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16357211) Ensembl
MGI		 PMID:16357211 GO_REF:0000107 NCBI chr26:8,411,429...8,444,640
Ensembl chr26:8,407,105...8,437,027 		JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:11406614) MGI PMID:11406614 NCBI chr27:41,819,574...41,884,198
Ensembl chr27:41,819,455...41,884,097 		JBrowse link
notochord formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRB2 crumbs cell polarity complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:59,427,661...59,450,436
Ensembl chr 9:59,427,569...59,450,434 		JBrowse link
G EFNA1 ephrin A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11287184) Ensembl
MGI		 PMID:11287184 GO_REF:0000107 NCBI chr 7:42,373,197...42,381,161
Ensembl chr 7:42,373,639...42,378,946 		JBrowse link
G EPHA2 EPH receptor A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11287184) Ensembl
MGI		 PMID:11287184 GO_REF:0000107 NCBI chr 2:81,534,130...81,561,722
Ensembl chr 2:81,534,125...81,561,725 		JBrowse link
G TBXT T-box transcription factor T involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7589801) Ensembl
MGI		 PMID:7589801 GO_REF:0000107 NCBI chr 1:54,183,495...54,192,331
Ensembl chr 1:54,183,153...54,192,352 		JBrowse link
notochord morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHA2 EPH receptor A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11287184) Ensembl
MGI		 PMID:11287184 GO_REF:0000107 NCBI chr 2:81,534,130...81,561,722
Ensembl chr 2:81,534,125...81,561,725 		JBrowse link
G KDM6A lysine demethylase 6A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22949634) Ensembl
MGI		 PMID:22949634 GO_REF:0000107 NCBI chr  X:38,745,854...38,964,029
Ensembl chr  X:38,745,854...38,959,842 		JBrowse link
G NCKAP1 NCK associated protein 1 acts_upstream_of_or_within ISO (PMID:16831833) MGI PMID:16831833 NCBI chr36:25,965,243...26,054,775
Ensembl chr36:25,965,938...26,054,760 		JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16916379) Ensembl
MGI		 PMID:16916379 GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G PPP1R35 protein phosphatase 1 regulatory subunit 35 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:9,231,738...9,233,347
Ensembl chr 6:9,232,173...9,233,344 		JBrowse link
G WNT11 Wnt family member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25813538) Ensembl
MGI		 PMID:25813538 GO_REF:0000107 NCBI chr21:22,442,496...22,463,040
Ensembl chr21:22,446,051...22,463,173 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25813538) Ensembl
MGI		 PMID:25813538 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
notochord regression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI1 GLI family zinc finger 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10725236) Ensembl
MGI		 PMID:10725236 GO_REF:0000107 NCBI chr10:1,565,306...1,575,971
Ensembl chr10:1,565,244...1,575,982 		JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10725236) Ensembl
MGI		 PMID:10725236 GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
olfactory placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU2F1 POU class 2 homeobox 1 acts_upstream_of_or_within ISO (PMID:17140559) MGI PMID:17140559 NCBI chr 7:30,975,303...31,162,288
Ensembl chr 7:30,986,181...31,162,246 		JBrowse link
G SIX1 SIX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534 		JBrowse link
G SIX4 SIX homeobox 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:35,735,893...35,748,976
Ensembl chr 8:35,737,058...35,748,893 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:17140559) MGI PMID:17140559 NCBI chr34:14,853,000...14,855,153 JBrowse link
optic cup formation involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID1A AT-rich interaction domain 1A acts_upstream_of_or_within ISO (PMID:23129809) MGI PMID:23129809 NCBI chr 2:73,331,606...73,401,151
Ensembl chr 2:73,324,852...73,401,102 		JBrowse link
optic cup morphogenesis involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:16611695) MGI PMID:16611695 NCBI chr 1:84,940,411...84,994,789
Ensembl chr 1:84,940,411...84,994,789 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16611695) Ensembl
MGI		 PMID:16611695 GO_REF:0000107 NCBI chr 3:40,130,904...40,168,686
Ensembl chr 3:40,132,726...40,168,664 		JBrowse link
G PAX2 paired box 2 involved_in ISO (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094 		JBrowse link
optic cup structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TFAP2A transcription factor AP-2 alpha involved_in ISO (MGI:4439459|PMID:20150232) UniProt PMID:20150232 MGI:4439459 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
optic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX3 SIX homeobox 3 involved_in ISO (MGI:2136715|PMID:11458394) UniProt PMID:11458394 MGI:2136715 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISO (MGI:4439459|PMID:20150232) UniProt PMID:20150232 MGI:4439459 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
otic vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14623822) Ensembl
MGI		 PMID:14623822 GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192 		JBrowse link
G FGF3 fibroblast growth factor 3 acts_upstream_of_or_within ISO (PMID:17601531) MGI PMID:17601531 NCBI chr18:48,382,819...48,388,453
Ensembl chr18:48,383,222...48,389,009 		JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17601531) Ensembl
MGI		 PMID:17601531 GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:9435295) UniProt
MGI		 PMID:9435295 GO_REF:0000024 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9620767) Ensembl
MGI		 PMID:9620767 GO_REF:0000107 NCBI chr20:33,193,813...33,197,226
Ensembl chr20:33,195,123...33,196,601 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:18377888) UniProt
MGI
Ensembl		 PMID:18377888 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172 		JBrowse link
G TCAP titin-cap involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,811,792...22,812,980
Ensembl chr 9:22,794,177...22,813,012 		JBrowse link
otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16916509) Ensembl
MGI		 PMID:16916509 GO_REF:0000107 NCBI chr29:20,176,306...20,595,131
Ensembl chr29:20,177,014...20,525,653 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:17074316) MGI PMID:17074316 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784 		JBrowse link
otolith morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLOC1S5 biogenesis of lysosomal organelles complex 1 subunit 5 acts_upstream_of_or_within ISO (PMID:5367369) MGI PMID:5367369 NCBI chr35:7,860,336...7,998,461
Ensembl chr35:7,955,923...7,998,505 		JBrowse link
G LRIG1 leucine rich repeats and immunoglobulin like domains 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24086156) Ensembl
MGI		 PMID:24086156 GO_REF:0000107 NCBI chr20:24,907,904...25,033,841
Ensembl chr20:24,890,191...25,032,647 		JBrowse link
G LRIG3 leucine rich repeats and immunoglobulin like domains 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24086156) Ensembl
MGI		 PMID:24086156 GO_REF:0000107 NCBI chr10:2,723,836...2,772,630
Ensembl chr10:2,724,951...2,772,636 		JBrowse link
G TTC39C tetratricopeptide repeat domain 39C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:64,242,157...64,306,963
Ensembl chr 7:64,244,716...64,306,941 		JBrowse link
outer ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10471511) Ensembl
MGI		 PMID:10471511 GO_REF:0000107 NCBI chr29:20,176,306...20,595,131
Ensembl chr29:20,177,014...20,525,653 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15630379) Ensembl
MGI		 PMID:15630379 GO_REF:0000107 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:17525797) MGI PMID:17525797 NCBI chr 1:72,927,346...72,930,119
Ensembl chr 1:72,927,670...72,928,827 		JBrowse link
G HOXA1 homeobox A1 involved_in ISO (PMID:16155570) DFLAT PMID:16155570 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18952847) Ensembl
MGI		 PMID:18952847 GO_REF:0000107 NCBI chr26:31,013,607...31,132,998
Ensembl chr26:31,013,607...31,132,998 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:18952847) MGI PMID:18952847 NCBI chr 6:18,109,184...18,115,728
Ensembl chr 6:18,109,222...18,114,425 		JBrowse link
G PRKRA protein activator of interferon induced protein kinase EIF2AK2 acts_upstream_of_or_within ISO (PMID:16571658) MGI PMID:16571658 NCBI chr36:22,061,226...22,080,324
Ensembl chr36:22,061,461...22,080,612 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:16600992) MGI PMID:16600992 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597 		JBrowse link
paraxial mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOC4 exocyst complex component 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441674) Ensembl
MGI		 PMID:9441674 GO_REF:0000107 NCBI chr14:3,334,286...4,077,478
Ensembl chr14:3,334,220...4,077,411 		JBrowse link
G FOXC1 forkhead box C1 involved_in
acts_upstream_of_or_within		 ISO (MGI:3047050|PMID:15196959)
(PMID:11562355)		 UniProt
MGI		 PMID:11562355 PMID:15196959 MGI:3047050
G FOXC2 forkhead box C2 acts_upstream_of_or_within ISO (PMID:11562355) MGI PMID:11562355 NCBI chr 5:66,234,336...66,296,007
Ensembl chr 5:66,294,176...66,295,693 		JBrowse link
G FOXC2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107
G HNF1A HNF1 homeobox A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10090727) Ensembl
MGI		 PMID:10090727 GO_REF:0000107 NCBI chr26:16,805,690...16,826,065
Ensembl chr26:16,805,690...16,824,790 		JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (PMID:16109169) MGI PMID:16109169 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10090727) Ensembl
MGI		 PMID:10090727 GO_REF:0000107 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019 		JBrowse link
G WNT11 Wnt family member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25813538) Ensembl
MGI		 PMID:25813538 GO_REF:0000107 NCBI chr21:22,442,496...22,463,040
Ensembl chr21:22,446,051...22,463,173 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25813538) Ensembl
MGI		 PMID:25813538 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
paraxial mesodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXC2 forkhead box C2 acts_upstream_of_or_within ISO (PMID:9106663) MGI PMID:9106663 NCBI chr 5:66,234,336...66,296,007
Ensembl chr 5:66,294,176...66,295,693 		JBrowse link
G FOXC2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9126297) Ensembl
MGI		 PMID:9126297 GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412 		JBrowse link
pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP5 bone morphogenetic protein 5 involved_in ISO (MGI:1332253|PMID:10079236) BHF-UCL PMID:10079236 MGI:1332253 NCBI chr12:23,089,429...23,202,176
Ensembl chr12:23,089,459...23,202,348 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653 		JBrowse link
G DLL4 delta like canonical Notch ligand 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,059,463...8,068,742
Ensembl chr30:8,059,512...8,067,940 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:19056682)
(PMID:19795512)		 MGI PMID:19056682 PMID:19795512 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277 		JBrowse link
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9030684) Ensembl
MGI		 PMID:9030684 GO_REF:0000107 NCBI chr17:31,007,940...31,181,569
Ensembl chr17:31,009,257...31,142,063 		JBrowse link
G TBX20 T-box transcription factor 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:46,891,706...46,946,899
Ensembl chr14:46,896,228...46,947,507 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19795512) Ensembl
MGI		 PMID:19795512 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
planar cell polarity pathway involved in gastrula mediolateral intercalation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT11 Wnt family member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25813538) Ensembl
MGI		 PMID:25813538 GO_REF:0000107 NCBI chr21:22,442,496...22,463,040
Ensembl chr21:22,446,051...22,463,173 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25813538) Ensembl
MGI		 PMID:25813538 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20704721) Ensembl
MGI		 PMID:20704721 GO_REF:0000107 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481 		JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16571627) Ensembl
MGI
TreeGrafter		 PMID:16571627 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:56,507,803...56,519,382
Ensembl chr 5:56,507,739...56,519,491 		JBrowse link
G DVL2 dishevelled segment polarity protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16571627) Ensembl
MGI
TreeGrafter		 PMID:16571627 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:32,194,326...32,201,922
Ensembl chr 5:32,194,313...32,201,857 		JBrowse link
G DVL3 dishevelled segment polarity protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19008950) TreeGrafter
MGI		 PMID:19008950 GO_REF:0000118 NCBI chr34:17,053,534...17,069,965
Ensembl chr34:17,053,343...17,068,389 		JBrowse link
G FZD1 frizzled class receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20940229) Ensembl
MGI		 PMID:20940229 GO_REF:0000107 NCBI chr14:17,046,911...17,050,515
Ensembl chr14:17,047,382...17,049,337 		JBrowse link
G FZD2 frizzled class receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20940229) Ensembl
MGI		 PMID:20940229 GO_REF:0000107 NCBI chr 9:18,888,711...18,890,549
Ensembl chr 9:18,888,696...18,890,525 		JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20643356) Ensembl
MGI		 PMID:20643356 GO_REF:0000107 NCBI chr 2:75,290,594...75,324,593
Ensembl chr 2:75,290,596...75,324,496 		JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20704721) Ensembl
MGI		 PMID:20704721 GO_REF:0000107 NCBI chr12:11,593,017...11,657,149
Ensembl chr12:11,593,043...11,656,320 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18257070) Ensembl
MGI		 PMID:18257070 GO_REF:0000107 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964 		JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (PMID:18257070) MGI PMID:18257070 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765 		JBrowse link
G SFRP5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (PMID:18257070) MGI PMID:18257070 NCBI chr28:10,994,180...10,999,552
Ensembl chr28:10,993,930...10,999,564 		JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:16571627)
(PMID:18257070)
(PMID:20940229)
(PMID:20704721)
(PMID:20643356)
(PMID:19008950)		 MGI PMID:16571627 PMID:18257070 PMID:19008950 PMID:20643356 PMID:20704721 More... NCBI chr38:21,822,873...21,824,537 JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19056682) Ensembl
MGI		 PMID:19056682 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
planar cell polarity pathway involved in pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19056682) Ensembl
MGI		 PMID:19056682 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLASP1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr19:28,563,189...28,830,503
Ensembl chr19:28,595,040...28,827,645 		JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr23:3,261,778...3,423,698
Ensembl chr23:3,246,522...3,421,716 		JBrowse link
G DAG1 dystroglycan 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550 		JBrowse link
G PHLDB1 pleckstrin homology like domain family B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,090,823...15,138,397
Ensembl chr 5:15,090,813...15,134,784 		JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:16,521,087...16,615,774
Ensembl chr33:16,497,202...16,614,132 		JBrowse link
positive regulation of endodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MACROH2A1 macroH2A.1 histone involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:23,369,957...23,448,235
Ensembl chr11:23,370,300...23,438,219 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16908534) Ensembl
MGI		 PMID:16908534 GO_REF:0000107 NCBI chr30:30,683,192...30,760,479
Ensembl chr30:30,683,107...30,760,479 		JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17940068) Ensembl
MGI		 PMID:17940068 GO_REF:0000107 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124 		JBrowse link
positive regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr24:1,010,370...1,013,791
Ensembl chr24:1,010,651...1,013,072 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in ISO (MGI:5009762|PMID:21281489) UniProt PMID:21281489 MGI:5009762 NCBI chr13:1,019,167...1,031,622
Ensembl chr13:1,023,879...1,031,225 		JBrowse link
G OTX2 orthodenticle homeobox 2 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446 		JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:1343990|PMID:10477299) UniProt PMID:10477299 MGI:1343990 NCBI chr13:37,701,781...37,704,949
Ensembl chr13:37,703,232...37,704,657 		JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:17,819,846...20,234,096
Ensembl chr21:19,732,991...20,230,305 		JBrowse link
positive regulation of mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR1-1 microRNA mir-1-1 involved_in ISO (PMID:23939491) BHF-UCL PMID:23939491 NCBI chr24:46,481,078...46,481,136
Ensembl chr24:46,481,078...46,481,136 		JBrowse link
G MIR1-2 microRNA mir-1-2 involved_in ISO (PMID:23939491) BHF-UCL PMID:23939491 NCBI chr 7:66,214,380...66,214,438
Ensembl chr 7:66,214,366...66,214,450 		JBrowse link
positive regulation of mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GJA1 gap junction protein alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:60,941,772...60,944,694
Ensembl chr 1:60,929,097...60,942,936 		JBrowse link
G MIR150 microRNA mir-150 involved_in ISO (PMID:23765923) BHF-UCL PMID:23765923 NCBI chr 1:106,998,756...106,998,812
Ensembl chr 1:106,998,756...106,998,812 		JBrowse link
G MIR200C microRNA mir-200c involved_in ISO (PMID:23765923) BHF-UCL PMID:23765923 NCBI chr27:38,082,097...38,082,159
Ensembl chr27:38,082,091...38,082,169 		JBrowse link
positive regulation of mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412 		JBrowse link
positive regulation of otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STOX1 storkhead box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:20,013,893...20,065,480
Ensembl chr 4:20,014,007...20,060,394 		JBrowse link
positive regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760 		JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714 		JBrowse link
G SIX1 SIX homeobox 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534 		JBrowse link
G SIX4 SIX homeobox 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:35,735,893...35,748,976
Ensembl chr 8:35,737,058...35,748,893 		JBrowse link
primary lung bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:16364283) MGI PMID:16364283 NCBI chr28:7,057,379...7,063,326
Ensembl chr28:7,057,283...7,063,330 		JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17473173) Ensembl
MGI		 PMID:17473173 GO_REF:0000107 NCBI chr29:21,886,014...21,912,451
Ensembl chr29:21,885,012...21,911,303 		JBrowse link
primitive streak formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ETS2 ETS proto-oncogene 2, transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23552073) Ensembl
MGI		 PMID:23552073 GO_REF:0000107 NCBI chr31:33,846,821...33,861,394
Ensembl chr31:33,839,010...33,860,330 		JBrowse link
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:11291865) MGI PMID:11291865 NCBI chr24:1,010,370...1,013,791
Ensembl chr24:1,010,651...1,013,072 		JBrowse link
G GDF3 growth differentiation factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16368929) Ensembl
MGI		 PMID:16368929 GO_REF:0000107 NCBI chr27:37,125,845...37,129,567
Ensembl chr27:37,125,928...37,129,484 		JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:21445260) MGI PMID:21445260 NCBI chr28:7,057,379...7,063,326
Ensembl chr28:7,057,283...7,063,330 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11291865) Ensembl
MGI		 PMID:11291865 GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19795512) MGI PMID:19795512 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:21445260) MGI PMID:21445260 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:11291865) MGI PMID:11291865 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:11,327,086...11,437,799
Ensembl chr27:11,426,647...11,437,303 		JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9799237) Ensembl
MGI		 PMID:9799237 GO_REF:0000107 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19795512) Ensembl
MGI		 PMID:19795512 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597 		JBrowse link
proepicardium cell migration involved in pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLRT3 fibronectin leucine rich transmembrane protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:8,354,151...8,367,601
Ensembl chr24:8,364,115...8,366,064 		JBrowse link
prostatic bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:11401393) Ensembl
MGI		 PMID:11401393 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12941620) Ensembl
MGI		 PMID:12941620 GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192 		JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16707121) Ensembl
MGI		 PMID:16707121 GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18028901) Ensembl
MGI		 PMID:18028901 GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G SHH sonic hedgehog signaling molecule NOT|acts_upstream_of_or_within ISO (PMID:15013801) MGI PMID:15013801 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11106548) Ensembl
MGI		 PMID:11106548 GO_REF:0000107 NCBI chr34:21,766,861...21,985,095
Ensembl chr34:21,766,496...21,983,046 		JBrowse link
regulation of endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:35,697,428...35,701,596
Ensembl chr26:35,697,618...35,701,496 		JBrowse link
regulation of establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19966784) Ensembl
MGI		 PMID:19966784 GO_REF:0000107 NCBI chr32:29,671,702...29,766,628
Ensembl chr32:29,671,738...29,772,192 		JBrowse link
regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLASP1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr19:28,563,189...28,830,503
Ensembl chr19:28,595,040...28,827,645 		JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr23:3,261,778...3,423,698
Ensembl chr23:3,246,522...3,421,716 		JBrowse link
G CRB2 crumbs cell polarity complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:59,427,661...59,450,436
Ensembl chr 9:59,427,569...59,450,434 		JBrowse link
G DAG1 dystroglycan 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550 		JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7958910) Ensembl
MGI		 PMID:7958910 GO_REF:0000107 NCBI chr24:31,847,864...31,908,337
Ensembl chr24:31,847,961...31,905,916 		JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:20040491) MGI PMID:20040491 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151 		JBrowse link
G PHLDB1 pleckstrin homology like domain family B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,090,823...15,138,397
Ensembl chr 5:15,090,813...15,134,784 		JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:16,521,087...16,615,774
Ensembl chr33:16,497,202...16,614,132 		JBrowse link
G POGLUT1 protein O-glucosyltransferase 1 involved_in ISO (MGI:5700252|PMID:26496195) UniProt PMID:26496195 MGI:5700252 NCBI chr33:23,122,682...23,150,863
Ensembl chr33:23,121,563...23,148,678 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (PMID:20040491) MGI PMID:20040491 NCBI chr 7:70,040,376...70,048,346
Ensembl chr 7:70,040,508...70,047,912 		JBrowse link
G TGIF2 TGFB induced factor homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20040491) Ensembl
MGI		 PMID:20040491 GO_REF:0000107 NCBI chr24:25,360,363...25,375,531
Ensembl chr24:25,364,357...25,373,302 		JBrowse link
regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RNF207 ring finger protein 207 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:60,105,200...60,119,902
Ensembl chr 5:60,106,297...60,118,670 		JBrowse link
regulation of lateral mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16943278) Ensembl
MGI		 PMID:16943278 GO_REF:0000107 NCBI chr 4:34,499,898...34,582,481
Ensembl chr 4:34,517,492...34,578,923 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16943278) Ensembl
MGI		 PMID:16943278 GO_REF:0000107 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261 		JBrowse link
regulation of mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17881493) Ensembl
MGI		 PMID:17881493 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
regulation of prostatic bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor acts_upstream_of_or_within ISO (PMID:12941620) MGI PMID:12941620 NCBI chr24:34,713,390...34,731,461
NCBI chr  X:51,969,785...52,167,450
Ensembl chr  X:51,969,785...52,151,912 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12221011)
(PMID:18393306)		 Ensembl
MGI		 PMID:12221011 PMID:18393306 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDNF glial cell derived neurotrophic factor involved_in ISO PMID:19112489 UniProt PMID:19112489 RGD:8656008 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714 		JBrowse link
roof plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDF7 growth differentiation factor 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10693795) Ensembl
MGI		 PMID:10693795 GO_REF:0000107 NCBI chr17:15,627,739...15,636,513 JBrowse link
semicircular canal formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA1 homeobox A1 involved_in ISO (PMID:16155570) DFLAT PMID:16155570 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
semicircular canal fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15765517) Ensembl
MGI		 PMID:15765517 GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192 		JBrowse link
semicircular canal morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHD7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19855134) Ensembl
MGI		 PMID:19855134 GO_REF:0000107 NCBI chr29:11,115,865...11,284,713
Ensembl chr29:11,156,340...11,283,627 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10072433) Ensembl
MGI		 PMID:10072433 GO_REF:0000107 NCBI chr29:20,176,306...20,595,131
Ensembl chr29:20,177,014...20,525,653 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17601531) Ensembl
MGI		 PMID:17601531 GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192 		JBrowse link
G FGF3 fibroblast growth factor 3 acts_upstream_of_or_within ISO (PMID:17601531) MGI PMID:17601531 NCBI chr18:48,382,819...48,388,453
Ensembl chr18:48,383,222...48,389,009 		JBrowse link
G NR4A3 nuclear receptor subfamily 4 group A member 3 acts_upstream_of_or_within ISO (PMID:11784868) MGI PMID:11784868 NCBI chr11:56,806,506...56,846,997
Ensembl chr11:56,812,804...56,847,689 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:19855134) MGI PMID:19855134 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:11,694,885...11,709,594
Ensembl chr26:11,696,565...11,708,918 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21980308) Ensembl
MGI		 PMID:21980308 GO_REF:0000107 NCBI chr 2:15,300,401...15,481,535
Ensembl chr 2:15,299,723...15,481,495 		JBrowse link
specification of anterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228 		JBrowse link
specification of loop of Henle identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388 		JBrowse link
G IRX1 iroquois homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:9,537,231...9,544,029
Ensembl chr34:9,538,479...9,544,029 		JBrowse link
G IRX2 iroquois homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:10,228,067...10,233,214
Ensembl chr34:10,227,807...10,232,998 		JBrowse link
G IRX3 iroquois homeobox 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:61,555,608...61,559,185
Ensembl chr 2:61,555,492...61,558,958 		JBrowse link
specification of posterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228 		JBrowse link
trophectodermal cellular morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUL3 cullin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10500095) Ensembl
MGI		 PMID:10500095 GO_REF:0000107 NCBI chr25:37,730,903...37,819,851
Ensembl chr25:37,733,229...37,800,886 		JBrowse link
G ESRRB estrogen related receptor beta acts_upstream_of_or_within ISO (PMID:9285590) MGI PMID:9285590 NCBI chr 8:49,253,877...49,424,148
Ensembl chr 8:49,253,332...49,421,332 		JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:11456449) MGI PMID:11456449 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151 		JBrowse link
ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760 		JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:2,219,535...2,231,868
Ensembl chr30:2,222,898...2,225,418 		JBrowse link
G HS2ST1 heparan sulfate 2-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9637690) Ensembl
MGI		 PMID:9637690 GO_REF:0000107 NCBI chr 6:61,124,393...61,298,912 JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
vestibular receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTPRQ protein tyrosine phosphatase receptor type Q involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22357859) Ensembl
MGI		 PMID:22357859 GO_REF:0000107 NCBI chr15:22,771,653...23,017,694
Ensembl chr15:22,825,348...23,013,762 		JBrowse link
vestibular receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLS1 plastin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:38,243,631...38,347,195
Ensembl chr23:38,243,024...38,347,202 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17925
    developmental process 6840
      anatomical structure morphogenesis 3004
        embryonic morphogenesis 702
          Malpighian tubule morphogenesis + 0
          auditory receptor cell morphogenesis + 29
          branching involved in labyrinthine layer morphogenesis + 15
          cell morphogenesis involved in semicircular canal fusion 0
          clearance of cells from fusion plate + 0
          cochlea morphogenesis 28
          convergent extension involved in gastrulation + 7
          cotyledon morphogenesis + 0
          dorsal closure, amnioserosa morphology change 0
          dorsal closure, elongation of leading edge cells 0
          embryo sac morphogenesis 0
          embryonic appendage morphogenesis + 149
          embryonic body morphogenesis + 15
          embryonic digit morphogenesis + 74
          embryonic ectodermal digestive tract morphogenesis + 1
          embryonic foregut morphogenesis 11
          embryonic heart tube morphogenesis + 69
          embryonic hindgut morphogenesis + 5
          embryonic nail plate morphogenesis 4
          embryonic neurocranium morphogenesis 10
          embryonic organ morphogenesis + 335
          embryonic placenta morphogenesis + 33
          embryonic retina morphogenesis in camera-type eye 7
          embryonic root morphogenesis 0
          embryonic shoot morphogenesis 0
          embryonic viscerocranium morphogenesis 11
          epiboly involved in gastrulation with mouth forming second + 1
          epithelial cell morphogenesis involved in placental branching 4
          establishment of planar polarity involved in neural tube closure + 16
          floor plate morphogenesis + 4
          gastrulation + 217
          germ-band extension 0
          germ-band shortening 0
          head involution 0
          heart rudiment morphogenesis + 0
          initiation of dorsal closure + 0
          initiation of neural tube closure 1
          inner cell mass cellular morphogenesis 3
          inner ear morphogenesis + 122
          invagination involved in gastrulation with mouth forming second 0
          involution involved in gastrulation with mouth forming second 0
          labyrinthine layer morphogenesis + 29
          lens placode formation + 2
          mesodermal to mesenchymal transition involved in gastrulation + 3
          midbrain-hindbrain boundary morphogenesis + 4
          middle ear morphogenesis 26
          morphogenesis of an epithelial fold involved in embryonic heart tube formation + 0
          morphogenesis of embryonic epithelium + 190
          neural fold bending + 1
          neural fold folding 0
          neural plate elongation + 3
          neural plate thickening 0
          olfactory placode morphogenesis + 4
          optic vesicle morphogenesis + 2
          otolith morphogenesis + 4
          outer ear morphogenesis + 9
          pericardium morphogenesis + 9
          posterior midgut invagination 0
          pouch outgrowth involved in semicircular canal formation 0
          semicircular canal morphogenesis + 9
          suture of dorsal opening 0
          trophectodermal cellular morphogenesis 3
          vestibular receptor cell morphogenesis + 2
          zygote elongation 0
Path 2
Term Annotations click to browse term
  biological_process 17925
    developmental process 6840
      anatomical structure development 6424
        multicellular organism development 5184
          embryo development 1346
            embryonic morphogenesis 702
              Malpighian tubule morphogenesis + 0
              auditory receptor cell morphogenesis + 29
              branching involved in labyrinthine layer morphogenesis + 15
              cell morphogenesis involved in semicircular canal fusion 0
              clearance of cells from fusion plate + 0
              cochlea morphogenesis 28
              convergent extension involved in gastrulation + 7
              cotyledon morphogenesis + 0
              dorsal closure, amnioserosa morphology change 0
              dorsal closure, elongation of leading edge cells 0
              embryo sac morphogenesis 0
              embryonic appendage morphogenesis + 149
              embryonic body morphogenesis + 15
              embryonic digit morphogenesis + 74
              embryonic ectodermal digestive tract morphogenesis + 1
              embryonic foregut morphogenesis 11
              embryonic heart tube morphogenesis + 69
              embryonic hindgut morphogenesis + 5
              embryonic nail plate morphogenesis 4
              embryonic neurocranium morphogenesis 10
              embryonic organ morphogenesis + 335
              embryonic placenta morphogenesis + 33
              embryonic retina morphogenesis in camera-type eye 7
              embryonic root morphogenesis 0
              embryonic shoot morphogenesis 0
              embryonic viscerocranium morphogenesis 11
              epiboly involved in gastrulation with mouth forming second + 1
              epithelial cell morphogenesis involved in placental branching 4
              establishment of planar polarity involved in neural tube closure + 16
              floor plate morphogenesis + 4
              gastrulation + 217
              germ-band extension 0
              germ-band shortening 0
              head involution 0
              heart rudiment morphogenesis + 0
              initiation of dorsal closure + 0
              initiation of neural tube closure 1
              inner cell mass cellular morphogenesis 3
              inner ear morphogenesis + 122
              invagination involved in gastrulation with mouth forming second 0
              involution involved in gastrulation with mouth forming second 0
              labyrinthine layer morphogenesis + 29
              lens placode formation + 2
              mesodermal to mesenchymal transition involved in gastrulation + 3
              midbrain-hindbrain boundary morphogenesis + 4
              middle ear morphogenesis 26
              morphogenesis of an epithelial fold involved in embryonic heart tube formation + 0
              morphogenesis of embryonic epithelium + 190
              neural fold bending + 1
              neural fold folding 0
              neural plate elongation + 3
              neural plate thickening 0
              olfactory placode morphogenesis + 4
              optic vesicle morphogenesis + 2
              otolith morphogenesis + 4
              outer ear morphogenesis + 9
              pericardium morphogenesis + 9
              posterior midgut invagination 0
              pouch outgrowth involved in semicircular canal formation 0
              semicircular canal morphogenesis + 9
              suture of dorsal opening 0
              trophectodermal cellular morphogenesis 3
              vestibular receptor cell morphogenesis + 2
              zygote elongation 0
paths to the root