ONTOLOGY REPORT - ANNOTATIONS

Term:gastrulation
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Accession:GO:0007369 term browser browse the term
Definition:A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm.
Synonyms:xref_analog: Wikipedia:Gastrulation

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gastrulation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Acvr1 activin A receptor, type I GBrowse link ISO 3 40,191,727 40,260,488 RGD:1624291 RGD
G Arfrp1 ADP-ribosylation factor related protein 1 GBrowse link ISO 3 170,499,593 170,505,513 RGD:1624291 RGD
G Cer1 cerberus 1, DAN family BMP antagonist GBrowse link ISO 5 101,756,095 101,759,451 RGD:1624291 RGD
G Cml2 camello-like 2 GBrowse link IEA 4 120,044,197 120,044,877 RGD:1600115 UniProtKB
G Cul3 cullin 3 GBrowse link ISO 9 79,574,062 79,634,396 RGD:1624291 RGD
G Cul3 cullin 3 GBrowse link IEA 9 79,574,062 79,634,396 RGD:1600115 ENSEMBL
G Dld dihydrolipoamide dehydrogenase GBrowse link ISO 6 49,185,188 49,205,894 RGD:1624291 RGD
G Ext1 exostosin glycosyltransferase 1 GBrowse link ISO 7 89,392,837 89,671,523 RGD:1624291 RGD
G Ext1 exostosin glycosyltransferase 1 GBrowse link IEA 7 89,392,837 89,671,523 RGD:1600115 ENSEMBL
G Gnb2l1 guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1 GBrowse link IEA 10 34,067,237 34,072,593 RGD:1600115 UniProtKB
G Hira HIR histone cell cycle regulation defective homolog A (S. cerevisiae) ISO RGD:1624291 RGD
G Htt huntingtin GBrowse link ISO 14 81,490,322 81,636,856 RGD:1624291 RGD
G Htt huntingtin GBrowse link ISO 14 81,490,322 81,636,856 RGD:1624291 RGD
G Htt huntingtin GBrowse link ISO 14 81,490,322 81,636,856 RGD:1624291 RGD
G Jup junction plakoglobin GBrowse link IBA 10 89,307,938 89,335,254 RGD:1600115 RefGenome
G Mixl1 Mix paired-like homeobox 1 GBrowse link ISO 13 96,427,597 96,431,628 RGD:1624291 RGD
G Nodal nodal growth differentiation factor GBrowse link ISO 20 29,546,982 29,555,419 RGD:1624291 RGD
G Nodal nodal growth differentiation factor GBrowse link ISO 20 29,546,982 29,555,419 RGD:1624291 RGD
G Ric8a resistance to inhibitors of cholinesterase 8 homolog A (C. elegans) GBrowse link ISO 1 201,014,483 201,020,790 RGD:1624291 RGD
G Rps6 ribosomal protein S6 GBrowse link ISO 5 106,165,612 106,168,472 RGD:1624291 RGD
G Smad2 SMAD family member 2 GBrowse link ISO 18 73,180,520 73,241,707 RGD:1624291 RGD
G Smad3 SMAD family member 3 GBrowse link ISO 8 67,803,909 67,952,056 RGD:1624291 RGD
G Smad4 SMAD family member 4 GBrowse link ISO 18 70,432,705 70,461,541 RGD:1624291 RGD
G Sox17 SRY (sex determining region Y)-box 17 GBrowse link ISO 5 15,241,405 15,246,904 RGD:1624291 RGD
G Srf serum response factor (c-fos serum response element-binding transcription factor) GBrowse link ISO 9 9,788,378 9,797,639 RGD:1624291 RGD
G Supt20 suppressor of Ty 20 GBrowse link IEA 2 143,921,831 143,955,032 RGD:1600115 UniProtKB
G Syf2 SYF2 homolog, RNA splicing factor (S. cerevisiae) GBrowse link ISO 5 153,707,654 153,715,581 RGD:1624291 RGD
G Tdgf1 teratocarcinoma-derived growth factor 1 GBrowse link ISO 8 115,341,587 115,346,871 RGD:1624291 RGD
G Tgfbr2 transforming growth factor, beta receptor II GBrowse link ISO 8 120,593,595 120,680,453 RGD:1624291 RGD
G Tgfbr2 transforming growth factor, beta receptor II GBrowse link IEA 8 120,593,595 120,680,453 RGD:1600115 ENSEMBL
G Tp53 tumor protein p53 GBrowse link ISO 10 56,399,721 56,411,150 RGD:1624291 RGD
G Txnrd1 thioredoxin reductase 1 GBrowse link ISO 7 23,055,544 23,093,815 RGD:1624291 RGD
axial mesoderm formation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Axin1 axin 1 GBrowse link ISO 10 15,409,373 15,462,726 RGD:1624291 RGD
G Axin1 axin 1 GBrowse link IBA 10 15,409,373 15,462,726 RGD:1600115 RefGenome
G Epha2 Eph receptor A2 GBrowse link ISO 5 160,185,143 160,214,727 RGD:1624291 RGD
axial mesodermal cell fate specification term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Nodal nodal growth differentiation factor GBrowse link ISO 20 29,546,982 29,555,419 RGD:1624291 RGD
G Nodal nodal growth differentiation factor GBrowse link IEA 20 29,546,982 29,555,419 RGD:1600115 ENSEMBL
BMP signaling pathway involved in mesodermal cell fate specification term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Etv2 ets variant 2 GBrowse link ISO 1 85,684,698 85,686,914 RGD:1624291 RGD
G Etv2 ets variant 2 GBrowse link IEA 1 85,684,698 85,686,914 RGD:1600115 ENSEMBL
cell fate commitment involved in formation of primary germ layer term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Pou5f1 POU class 5 homeobox 1 ISO RGD:1624291 RGD
cell migration involved in gastrulation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Amot angiomotin GBrowse link ISO X 33,018,434 33,062,515 RGD:1624291 RGD
G Amot angiomotin GBrowse link IEA X 33,018,434 33,062,515 RGD:1600115 ENSEMBL
G Cer1 cerberus 1, DAN family BMP antagonist GBrowse link ISO 5 101,756,095 101,759,451 RGD:1624291 RGD
G Cer1 cerberus 1, DAN family BMP antagonist GBrowse link IEA 5 101,756,095 101,759,451 RGD:1600115 ENSEMBL
G Foxh1 forkhead box H1 GBrowse link IBA 7 114,717,890 114,719,455 RGD:1600115 RefGenome
G Lefty1 left right determination factor 1 GBrowse link ISO 13 96,664,408 96,667,805 RGD:1624291 RGD
G Lefty1 left right determination factor 1 GBrowse link IEA 13 96,664,408 96,667,805 RGD:1600115 ENSEMBL
G Lrp5 low density lipoprotein receptor-related protein 5 GBrowse link ISO 1 206,102,750 206,206,350 RGD:1624291 RGD
G Lrp5 low density lipoprotein receptor-related protein 5 GBrowse link IEA 1 206,102,750 206,206,350 RGD:1600115 ENSEMBL
G Lrp6 low density lipoprotein receptor-related protein 6 GBrowse link ISO 4 171,337,114 171,444,932 RGD:1624291 RGD
G Lrp6 low density lipoprotein receptor-related protein 6 GBrowse link IEA 4 171,337,114 171,444,932 RGD:1600115 ENSEMBL
G Mixl1 Mix paired-like homeobox 1 GBrowse link ISO 13 96,427,597 96,431,628 RGD:1624291 RGD
G Nckap1 NCK-associated protein 1 GBrowse link ISO 3 63,191,700 63,274,021 RGD:1624291 RGD
G Nodal nodal growth differentiation factor GBrowse link ISO 20 29,546,982 29,555,419 RGD:1624291 RGD
G Nodal nodal growth differentiation factor GBrowse link IEA 20 29,546,982 29,555,419 RGD:1600115 ENSEMBL
G Ric8a resistance to inhibitors of cholinesterase 8 homolog A (C. elegans) GBrowse link ISO 1 201,014,483 201,020,790 RGD:1624291 RGD
G Ric8a resistance to inhibitors of cholinesterase 8 homolog A (C. elegans) GBrowse link IEA 1 201,014,483 201,020,790 RGD:1600115 ENSEMBL
G Sox17 SRY (sex determining region Y)-box 17 GBrowse link ISO 5 15,241,405 15,246,904 RGD:1624291 RGD
G Sox17 SRY (sex determining region Y)-box 17 GBrowse link IEA 5 15,241,405 15,246,904 RGD:1600115 ENSEMBL
cell migration involved in mesendoderm migration term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Fgf8 fibroblast growth factor 8 GBrowse link ISO 1 250,951,023 250,956,730 RGD:1624291 RGD
G Fgf8 fibroblast growth factor 8 GBrowse link IEA 1 250,951,023 250,956,730 RGD:1600115 ENSEMBL
cell-cell adhesion involved in gastrulation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Ric8a resistance to inhibitors of cholinesterase 8 homolog A (C. elegans) GBrowse link ISO 1 201,014,483 201,020,790 RGD:1624291 RGD
G Ric8a resistance to inhibitors of cholinesterase 8 homolog A (C. elegans) GBrowse link IEA 1 201,014,483 201,020,790 RGD:1600115 ENSEMBL
convergent extension involved in gastrulation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Nphp3 nephronophthisis 3 (adolescent) GBrowse link IEA 8 109,065,400 109,105,882 RGD:1600115 ENSEMBL
G Nphp3 nephronophthisis 3 (adolescent) GBrowse link ISO 8 109,065,400 109,105,882 RGD:1624291 RGD
ectoderm formation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Foxa2 forkhead box A2 GBrowse link ISO 3 136,739,009 136,743,204 RGD:1624291 RGD
G Foxa2 forkhead box A2 GBrowse link IEA 3 136,739,009 136,743,204 RGD:1600115 ENSEMBL
G Foxa2 forkhead box A2 GBrowse link IBA 3 136,739,009 136,743,204 RGD:1600115 RefGenome
G Lhx1 LIM homeobox 1 GBrowse link ISO 10 72,800,497 72,805,799 RGD:1624291 RGD
G Lhx1 LIM homeobox 1 GBrowse link ISS 10 72,800,497 72,805,799 RGD:1600115 UniProtKB
ectodermal cell fate commitment term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Pou5f1 POU class 5 homeobox 1 ISO RGD:1624291 RGD
G Pou5f1 POU class 5 homeobox 1 IEA RGD:1600115 ENSEMBL
endoderm formation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Ctnnb1 catenin (cadherin associated protein), beta 1 GBrowse link ISO 8 125,978,161 125,987,670 RGD:1624291 RGD
G Dkk1 dickkopf 1 homolog (Xenopus laevis) GBrowse link ISO 1 234,392,743 234,396,426 RGD:1624291 RGD
G Dusp1 dual specificity phosphatase 1 GBrowse link IBA 10 16,942,913 16,945,696 RGD:1600115 RefGenome
G Dusp2 dual specificity phosphatase 2 GBrowse link IBA 3 114,838,605 114,840,790 RGD:1600115 RefGenome
G Dusp4 dual specificity phosphatase 4 GBrowse link IBA 16 61,109,626 61,119,981 RGD:1600115 RefGenome
G Dusp5 dual specificity phosphatase 5 GBrowse link IBA 1 259,754,234 259,767,645 RGD:1600115 RefGenome
G Eomes eomesodermin GBrowse link ISO 8 123,376,689 123,383,451 RGD:1624291 RGD
G Eomes eomesodermin GBrowse link ISO 8 123,376,689 123,383,451 RGD:1624291 RGD
G Eomes eomesodermin GBrowse link ISO 8 123,376,689 123,383,451 RGD:1624291 RGD
G Gata4 GATA binding protein 4 GBrowse link ISO 15 42,472,793 42,519,569 RGD:1624291 RGD
G Gata4 GATA binding protein 4 GBrowse link IEA 15 42,472,793 42,519,569 RGD:1600115 ENSEMBL
G Lhx1 LIM homeobox 1 GBrowse link ISO 10 72,800,497 72,805,799 RGD:1624291 RGD
G Lhx1 LIM homeobox 1 GBrowse link ISS 10 72,800,497 72,805,799 RGD:1600115 UniProtKB
G Mixl1 Mix paired-like homeobox 1 GBrowse link ISO 13 96,427,597 96,431,628 RGD:1624291 RGD
G Nog noggin GBrowse link ISO 10 77,689,244 77,690,871 RGD:1624291 RGD
G Nog noggin GBrowse link IEA 10 77,689,244 77,690,871 RGD:1600115 ENSEMBL
G Smad2 SMAD family member 2 GBrowse link ISO 18 73,180,520 73,241,707 RGD:1624291 RGD
G Sox17 SRY (sex determining region Y)-box 17 GBrowse link ISO 5 15,241,405 15,246,904 RGD:1624291 RGD
G Sox7 SRY (sex determining region Y)-box 7 GBrowse link IEA 15 43,207,965 43,214,726 RGD:1600115 ENSEMBL
G Sox7 SRY (sex determining region Y)-box 7 GBrowse link ISO 15 43,207,965 43,214,726 RGD:1624291 RGD
endodermal cell differentiation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Gata6 GATA binding protein 6 GBrowse link ISO 18 2,504,264 2,534,648 RGD:1624291 RGD
G Hmga2 high mobility group AT-hook 2 GBrowse link ISO 7 59,638,555 59,753,791 RGD:1624291 RGD
G Hmga2 high mobility group AT-hook 2 GBrowse link ISS 7 59,638,555 59,753,791 RGD:1600115 UniProtKB
G Mixl1 Mix paired-like homeobox 1 GBrowse link ISO 13 96,427,597 96,431,628 RGD:1624291 RGD
G Nodal nodal growth differentiation factor GBrowse link IEA 20 29,546,982 29,555,419 RGD:1600115 ENSEMBL
G Nodal nodal growth differentiation factor GBrowse link ISO 20 29,546,982 29,555,419 RGD:1624291 RGD
endodermal cell fate commitment term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Cdc73 cell division cycle 73 GBrowse link ISO 13 57,441,674 57,534,385 RGD:1624291 RGD
G Cdc73 cell division cycle 73 GBrowse link IEA 13 57,441,674 57,534,385 RGD:1600115 ENSEMBL
G Cdc73 cell division cycle 73 GBrowse link ISS 13 57,441,674 57,534,385 RGD:1600115 UniProtKB
G Ctnnb1 catenin (cadherin associated protein), beta 1 GBrowse link ISO 8 125,978,161 125,987,670 RGD:1624291 RGD
G Ctnnb1 catenin (cadherin associated protein), beta 1 GBrowse link IBA 8 125,978,161 125,987,670 RGD:1600115 RefGenome
G Ctr9 Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) GBrowse link ISO 1 168,784,355 168,814,971 RGD:1624291 RGD
G Ctr9 Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) GBrowse link IEA 1 168,784,355 168,814,971 RGD:1600115 ENSEMBL
G Leo1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) GBrowse link ISO 8 80,266,160 80,290,547 RGD:1624291 RGD
G Leo1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) GBrowse link ISS 8 80,266,160 80,290,547 RGD:1600115 UniProtKB
G Paf1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) GBrowse link ISO 1 83,501,213 83,506,791 RGD:1624291 RGD
G Paf1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) GBrowse link ISS 1 83,501,213 83,506,791 RGD:1600115 UniProtKB
G Pou5f1 POU class 5 homeobox 1 ISO RGD:1624291 RGD
G Pou5f1 POU class 5 homeobox 1 IEA RGD:1600115 ENSEMBL
G Rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) GBrowse link IEA 3 106,190,937 106,250,416 RGD:1600115 ENSEMBL
endodermal cell fate determination term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Gata6 GATA binding protein 6 GBrowse link ISO 18 2,504,264 2,534,648 RGD:1624291 RGD
G Sox17 SRY (sex determining region Y)-box 17 GBrowse link ISO 5 15,241,405 15,246,904 RGD:1624291 RGD
G Sox17 SRY (sex determining region Y)-box 17 GBrowse link IEA 5 15,241,405 15,246,904 RGD:1600115 ENSEMBL
endodermal cell fate specification term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Eomes eomesodermin GBrowse link ISO 8 123,376,689 123,383,451 RGD:1624291 RGD
G Hnf1b HNF1 homeobox B GBrowse link ISO 10 72,081,091 72,187,014 RGD:1624291 RGD
G Nanog Nanog homeobox GBrowse link ISO 4 159,190,786 159,198,160 RGD:1624291 RGD
G Pou5f1 POU class 5 homeobox 1 ISO RGD:1624291 RGD
G Sox2 SRY (sex determining region Y)-box 2 GBrowse link ISO 2 120,969,021 120,971,430 RGD:1624291 RGD
G Sox2 SRY (sex determining region Y)-box 2 GBrowse link IEA 2 120,969,021 120,971,430 RGD:1600115 ENSEMBL
formation of primary germ layer term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Kif16b kinesin family member 16B GBrowse link ISO 3 130,967,515 131,250,402 RGD:1624291 RGD
G Kif16b kinesin family member 16B GBrowse link IEA 3 130,967,515 131,250,402 RGD:1600115 ENSEMBL
gastrulation with mouth forming second term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Acvr1 activin A receptor, type I GBrowse link ISO 3 40,191,727 40,260,488 RGD:1624291 RGD
G Acvr1 activin A receptor, type I GBrowse link IEA 3 40,191,727 40,260,488 RGD:1600115 ENSEMBL
G Acvr2a activin A receptor, type IIA GBrowse link ISO 3 29,779,827 29,808,881 RGD:1624291 RGD
G Acvr2b activin A receptor, type IIB GBrowse link ISO 8 124,364,330 124,395,748 RGD:1624291 RGD
G Acvr2b activin A receptor, type IIB GBrowse link IEA 8 124,364,330 124,395,748 RGD:1600115 ENSEMBL
G Amot angiomotin GBrowse link ISO X 33,018,434 33,062,515 RGD:1624291 RGD
G Amot angiomotin GBrowse link IEA X 33,018,434 33,062,515 RGD:1600115 ENSEMBL
G Chrd chordin GBrowse link ISO 11 82,401,701 82,410,401 RGD:1624291 RGD
G Chrd chordin GBrowse link IEA 11 82,401,701 82,410,401 RGD:1600115 ENSEMBL
G Cml1 camello-like 1 GBrowse link NAS 4 120,059,311 120,065,996 RGD:632468 UniProtKB
G Cml3 camello-like 3 GBrowse link NAS 4 119,964,411 119,966,307 RGD:632468 UniProtKB
G Cml5 camello-like 5 GBrowse link NAS 4 119,981,266 120,006,794 RGD:632468 UniProtKB
G Ctnnb1 catenin (cadherin associated protein), beta 1 GBrowse link ISO 8 125,978,161 125,987,670 RGD:1624291 RGD
G Ctnnb1 catenin (cadherin associated protein), beta 1 GBrowse link IBA 8 125,978,161 125,987,670 RGD:1600115 RefGenome
G Dact1 dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis) GBrowse link ISO 6 93,402,304 93,411,668 RGD:1624291 RGD
G Frs2 fibroblast growth factor receptor substrate 2 GBrowse link ISO 7 56,409,863 56,490,535 RGD:1624291 RGD
G Frs2 fibroblast growth factor receptor substrate 2 GBrowse link IEA 7 56,409,863 56,490,535 RGD:1600115 ENSEMBL
G Gata4 GATA binding protein 4 GBrowse link ISO 15 42,472,793 42,519,569 RGD:1624291 RGD
G Gata4 GATA binding protein 4 GBrowse link IEA 15 42,472,793 42,519,569 RGD:1600115 ENSEMBL
G Ldb1 LIM domain binding 1 GBrowse link ISO 1 251,253,305 251,260,850 RGD:1624291 RGD
G Ldb1 LIM domain binding 1 GBrowse link IEA 1 251,253,305 251,260,850 RGD:1600115 ENSEMBL
G Lhx1 LIM homeobox 1 GBrowse link ISO 10 72,800,497 72,805,799 RGD:1624291 RGD
G Lhx1 LIM homeobox 1 GBrowse link ISS 10 72,800,497 72,805,799 RGD:1600115 UniProtKB
G Lrp5 low density lipoprotein receptor-related protein 5 GBrowse link ISO 1 206,102,750 206,206,350 RGD:1624291 RGD
G Lrp5 low density lipoprotein receptor-related protein 5 GBrowse link IBA 1 206,102,750 206,206,350 RGD:1600115 RefGenome
G Lrp6 low density lipoprotein receptor-related protein 6 GBrowse link ISO 4 171,337,114 171,444,932 RGD:1624291 RGD
G Lrp6 low density lipoprotein receptor-related protein 6 GBrowse link IBA 4 171,337,114 171,444,932 RGD:1600115 RefGenome
G Nat8 N-acetyltransferase 8 GBrowse link ISO 4 120,001,277 120,002,055 RGD:1624291 RGD
G Nat8 N-acetyltransferase 8 GBrowse link ISS 4 120,001,277 120,002,055 RGD:1600115 UniProtKB
G Nat8b N-acetyltransferase 8B GBrowse link NAS 4 120,082,555 120,083,899 RGD:632468 UniProtKB
G Nodal nodal growth differentiation factor GBrowse link ISO 20 29,546,982 29,555,419 RGD:1624291 RGD
G Nsd1 nuclear receptor binding SET domain protein 1 GBrowse link ISO 17 15,362,482 15,471,961 RGD:1624291 RGD
G Nsd1 nuclear receptor binding SET domain protein 1 GBrowse link IEA 17 15,362,482 15,471,961 RGD:1600115 ENSEMBL
G Ppap2b phosphatidic acid phosphatase type 2B GBrowse link ISO 5 126,121,416 126,197,099 RGD:1624291 RGD
G Ppap2b phosphatidic acid phosphatase type 2B GBrowse link IEA 5 126,121,416 126,197,099 RGD:1600115 ENSEMBL
G Rnf2 ring finger protein 2 GBrowse link ISO 13 66,345,663 66,373,826 RGD:1624291 RGD
G Rnf2 ring finger protein 2 GBrowse link IEA 13 66,345,663 66,373,826 RGD:1600115 ENSEMBL
G Smad4 SMAD family member 4 GBrowse link ISO 18 70,432,705 70,461,541 RGD:1624291 RGD
G Ugdh UDP-glucose 6-dehydrogenase GBrowse link ISO 14 45,542,781 45,570,961 RGD:1624291 RGD
G Ugdh UDP-glucose 6-dehydrogenase GBrowse link IEA 14 45,542,781 45,570,961 RGD:1600115 ENSEMBL
G Zbtb17 zinc finger and BTB domain containing 17 GBrowse link ISO 5 160,337,988 160,359,060 RGD:1624291 RGD
G Zbtb17 zinc finger and BTB domain containing 17 GBrowse link IEA 5 160,337,988 160,359,060 RGD:1600115 ENSEMBL
hemangioblast cell differentiation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Tal1 T-cell acute lymphocytic leukemia 1 GBrowse link IEA 5 135,430,985 135,444,692 RGD:1600115 ENSEMBL
intermediate mesodermal cell differentiation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Bmp4 bone morphogenetic protein 4 GBrowse link ISO 15 22,283,171 22,286,757 RGD:1624291 RGD
G Bmp4 bone morphogenetic protein 4 GBrowse link ISS 15 22,283,171 22,286,757 RGD:1600115 UniProtKB
G Bmp4 bone morphogenetic protein 4 GBrowse link IEA 15 22,283,171 22,286,757 RGD:1600115 ENSEMBL
mesoderm formation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Acvr1 activin A receptor, type I GBrowse link ISO 3 40,191,727 40,260,488 RGD:1624291 RGD
G Acvr1 activin A receptor, type I GBrowse link ISO 3 40,191,727 40,260,488 RGD:1624291 RGD
G Acvr1 activin A receptor, type I GBrowse link IEA 3 40,191,727 40,260,488 RGD:1600115 ENSEMBL
G Bmp4 bone morphogenetic protein 4 GBrowse link ISO 15 22,283,171 22,286,757 RGD:1624291 RGD
G Bmp4 bone morphogenetic protein 4 GBrowse link ISO 15 22,283,171 22,286,757 RGD:1624291 RGD
G Bmp7 bone morphogenetic protein 7 GBrowse link ISO 3 163,723,429 163,799,567 RGD:1624291 RGD
G Bmp7 bone morphogenetic protein 7 GBrowse link IEA 3 163,723,429 163,799,567 RGD:1600115 ENSEMBL
G Bmpr1a bone morphogenetic protein receptor, type IA GBrowse link ISO 16 10,061,943 10,105,854 RGD:1624291 RGD
G Bmpr1a bone morphogenetic protein receptor, type IA GBrowse link IEA 16 10,061,943 10,105,854 RGD:1600115 ENSEMBL
G Bmpr2 bone morphogenetic protein receptor, type II (serine/threonine kinase) GBrowse link ISO 9 58,327,587 58,436,057 RGD:1624291 RGD
G Chrd chordin GBrowse link ISO 11 82,401,701 82,410,401 RGD:1624291 RGD
G Chrd chordin GBrowse link IEA 11 82,401,701 82,410,401 RGD:1600115 ENSEMBL
G Dkk1 dickkopf 1 homolog (Xenopus laevis) GBrowse link ISO 1 234,392,743 234,396,426 RGD:1624291 RGD
G Ecsit ECSIT homolog (Drosophila) GBrowse link ISO 8 21,180,813 21,188,450 RGD:1624291 RGD
G Ecsit ECSIT homolog (Drosophila) GBrowse link IEA 8 21,180,813 21,188,450 RGD:1600115 ENSEMBL
G Eomes eomesodermin GBrowse link ISO 8 123,376,689 123,383,451 RGD:1624291 RGD
G Etv2 ets variant 2 GBrowse link ISO 1 85,684,698 85,686,914 RGD:1624291 RGD
G Ext2 exostosin glycosyltransferase 2 GBrowse link ISO 3 78,111,436 78,244,444 RGD:1624291 RGD
G Hand1 heart and neural crest derivatives expressed 1 GBrowse link ISO 10 43,423,366 43,425,933 RGD:1624291 RGD
G Hand1 heart and neural crest derivatives expressed 1 GBrowse link IEA 10 43,423,366 43,425,933 RGD:1600115 ENSEMBL
G Inhba inhibin beta-A GBrowse link ISO 17 57,244,466 57,257,531 RGD:1624291 RGD
G LOC100910454 twisted gastrulation protein homolog 1-like IEA RGD:1600115 ENSEMBL
G Macf1 microtubule-actin crosslinking factor 1 GBrowse link IEA 5 142,659,726 142,986,873 RGD:1600115 ENSEMBL
G Nf2 neurofibromin 2 (merlin) GBrowse link ISO 14 85,415,142 85,508,807 RGD:1624291 RGD
G Nf2 neurofibromin 2 (merlin) GBrowse link IEA 14 85,415,142 85,508,807 RGD:1600115 ENSEMBL
G Nodal nodal growth differentiation factor GBrowse link ISO 20 29,546,982 29,555,419 RGD:1624291 RGD
G Nog noggin GBrowse link ISO 10 77,689,244 77,690,871 RGD:1624291 RGD
G Nog noggin GBrowse link IEA 10 77,689,244 77,690,871 RGD:1600115 ENSEMBL
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 GBrowse link ISO 5 64,713,468 64,753,311 RGD:1624291 RGD
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 GBrowse link IEA 5 64,713,468 64,753,311 RGD:1600115 ENSEMBL
G Pofut2 protein O-fucosyltransferase 2 GBrowse link IEA 20 11,763,519 11,774,234 RGD:1600115 ENSEMBL
G Pofut2 protein O-fucosyltransferase 2 GBrowse link ISO 20 11,763,519 11,774,234 RGD:1624291 RGD
G Prkaca protein kinase, cAMP-dependent, catalytic, alpha GBrowse link ISO 19 25,840,795 25,864,786 RGD:1624291 RGD
G Prkaca protein kinase, cAMP-dependent, catalytic, alpha GBrowse link IEA 19 25,840,795 25,864,786 RGD:1600115 ENSEMBL
G Prkar1a protein kinase, cAMP-dependent, regulatory, type I, alpha GBrowse link ISO 10 148,642,200 148,642,454 RGD:1624291 RGD
G Prkar1a protein kinase, cAMP-dependent, regulatory, type I, alpha GBrowse link IEA 10 148,642,200 148,642,454 RGD:1600115 ENSEMBL
G Scx scleraxis GBrowse link ISO 7 114,504,701 114,506,719 RGD:1624291 RGD
G Scx scleraxis GBrowse link IEA 7 114,504,701 114,506,719 RGD:1600115 ENSEMBL
G Smad2 SMAD family member 2 GBrowse link ISO 18 73,180,520 73,241,707 RGD:1624291 RGD
G Smad2 SMAD family member 2 GBrowse link ISS 18 73,180,520 73,241,707 RGD:1600115 UniProtKB
G Smad3 SMAD family member 3 GBrowse link ISO 8 67,803,909 67,952,056 RGD:1624291 RGD
G Smad3 SMAD family member 3 GBrowse link IEA 8 67,803,909 67,952,056 RGD:1600115 ENSEMBL
G Snai1 snail homolog 1 (Drosophila) GBrowse link ISO 3 158,676,980 158,681,471 RGD:1624291 RGD
G Snai1 snail homolog 1 (Drosophila) GBrowse link IEA 3 158,676,980 158,681,471 RGD:1600115 ENSEMBL
G Srf serum response factor (c-fos serum response element-binding transcription factor) GBrowse link ISO 9 9,788,378 9,797,639 RGD:1624291 RGD
G Srf serum response factor (c-fos serum response element-binding transcription factor) GBrowse link ISO 9 9,788,378 9,797,639 RGD:1624291 RGD
G Tbx6 T-box 6 GBrowse link ISO 1 185,957,068 185,960,977 RGD:1624291 RGD
G Tbx6 T-box 6 GBrowse link ISO 1 185,957,068 185,960,977 RGD:1624291 RGD
G Tbx6 T-box 6 GBrowse link IEA 1 185,957,068 185,960,977 RGD:1600115 ENSEMBL
G Tlx2 T-cell leukemia homeobox 2 GBrowse link ISO 4 117,279,091 117,281,693 RGD:1624291 RGD
G Twsg1 twisted gastrulation homolog 1 (Drosophila) GBrowse link ISO 9 104,694,731 104,729,090 RGD:1624291 RGD
G Twsg1 twisted gastrulation homolog 1 (Drosophila) GBrowse link IEA 9 104,694,731 104,729,090 RGD:1600115 ENSEMBL
G Txnrd1 thioredoxin reductase 1 GBrowse link ISO 7 23,055,544 23,093,815 RGD:1624291 RGD
G Txnrd1 thioredoxin reductase 1 GBrowse link IEA 7 23,055,544 23,093,815 RGD:1600115 ENSEMBL
G Wls wntless homolog (Drosophila) GBrowse link ISO 2 258,014,437 258,128,180 RGD:1624291 RGD
G Wls wntless homolog (Drosophila) GBrowse link IEA 2 258,014,437 258,128,180 RGD:1600115 ENSEMBL
G Wnt3 wingless-type MMTV integration site family, member 3 GBrowse link ISO 10 92,925,605 92,969,613 RGD:1624291 RGD
G Wnt3 wingless-type MMTV integration site family, member 3 GBrowse link IEA 10 92,925,605 92,969,613 RGD:1600115 ENSEMBL
mesoderm migration involved in gastrulation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Epb4.1l5 erythrocyte protein band 4.1-like 5 GBrowse link IEA 13 32,373,377 32,426,745 RGD:1600115 ENSEMBL
G T brachyury GBrowse link ISO 1 46,937,223 46,944,988 RGD:1624291 RGD
G T brachyury GBrowse link IEA 1 46,937,223 46,944,988 RGD:1600115 ENSEMBL
mesodermal cell differentiation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Bmp4 bone morphogenetic protein 4 GBrowse link ISO 15 22,283,171 22,286,757 RGD:1624291 RGD
G Fgfr2 fibroblast growth factor receptor 2 GBrowse link IEP 1 189,482,975 189,589,279 RGD:632663 RGD
G Hmga2 high mobility group AT-hook 2 GBrowse link ISO 7 59,638,555 59,753,791 RGD:1624291 RGD
G Hmga2 high mobility group AT-hook 2 GBrowse link ISS 7 59,638,555 59,753,791 RGD:1600115 UniProtKB
G Inhba inhibin beta-A GBrowse link ISO 17 57,244,466 57,257,531 RGD:1624291 RGD
G Inhba inhibin beta-A GBrowse link IEA 17 57,244,466 57,257,531 RGD:1600115 ENSEMBL
G Kdm6a lysine (K)-specific demethylase 6A GBrowse link ISO X 15,926,055 16,052,872 RGD:1624291 RGD
mesodermal cell fate commitment term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Nanog Nanog homeobox GBrowse link ISO 4 159,190,786 159,198,160 RGD:1624291 RGD
G Nanog Nanog homeobox GBrowse link IEA 4 159,190,786 159,198,160 RGD:1600115 ENSEMBL
G Pou5f1 POU class 5 homeobox 1 ISO RGD:1624291 RGD
G Pou5f1 POU class 5 homeobox 1 IEA RGD:1600115 ENSEMBL
G Smad1 SMAD family member 1 GBrowse link ISO 19 30,348,886 30,409,345 RGD:1624291 RGD
G Smad1 SMAD family member 1 GBrowse link IEA 19 30,348,886 30,409,345 RGD:1600115 ENSEMBL
mesodermal cell fate determination term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Bmp4 bone morphogenetic protein 4 GBrowse link ISO 15 22,283,171 22,286,757 RGD:1624291 RGD
G Bmp4 bone morphogenetic protein 4 GBrowse link IEA 15 22,283,171 22,286,757 RGD:1600115 ENSEMBL
mesodermal cell fate specification term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Eya1 eyes absent homolog 1 (Drosophila) GBrowse link ISO 5 4,132,825 4,276,837 RGD:1624291 RGD
G Hoxa11 homeobox A11 GBrowse link ISO 4 80,542,417 80,546,079 RGD:1624291 RGD
G Pax2 paired box 2 GBrowse link ISO 1 249,804,055 249,895,306 RGD:1624291 RGD
G Pax2 paired box 2 GBrowse link ISS 1 249,804,055 249,895,306 RGD:1600115 UniProtKB
G Six2 SIX homeobox 2 GBrowse link ISO 6 9,094,655 9,097,973 RGD:1624291 RGD
mesodermal cell migration term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Fgf8 fibroblast growth factor 8 GBrowse link ISO 1 250,951,023 250,956,730 RGD:1624291 RGD
G Fgf8 fibroblast growth factor 8 GBrowse link IEA 1 250,951,023 250,956,730 RGD:1600115 ENSEMBL
G Mesp1 mesoderm posterior 1 homolog (mouse) GBrowse link ISO 1 135,571,777 135,573,295 RGD:1624291 RGD
G Mesp1 mesoderm posterior 1 homolog (mouse) GBrowse link IEA 1 135,571,777 135,573,295 RGD:1600115 ENSEMBL
G Mesp2 mesoderm posterior 2 homolog (mouse) GBrowse link ISO 1 135,590,020 135,592,626 RGD:1624291 RGD
G Mesp2 mesoderm posterior 2 homolog (mouse) GBrowse link IEA 1 135,590,020 135,592,626 RGD:1600115 ENSEMBL
G Nckap1 NCK-associated protein 1 GBrowse link ISO 3 63,191,700 63,274,021 RGD:1624291 RGD
mesodermal to mesenchymal transition involved in gastrulation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Eomes eomesodermin GBrowse link ISO 8 123,376,689 123,383,451 RGD:1624291 RGD
negative regulation of ectodermal cell fate specification term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Cdk15 cyclin-dependent kinase 15 GBrowse link ISO 9 57,840,625 57,930,096 RGD:1624291 RGD
G Fzd7 frizzled family receptor 7 GBrowse link ISO 9 58,063,740 58,066,559 RGD:1624291 RGD
G Fzd7 frizzled family receptor 7 GBrowse link IEA 9 58,063,740 58,066,559 RGD:1600115 ENSEMBL
negative regulation of endodermal cell fate specification term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Mesp1 mesoderm posterior 1 homolog (mouse) GBrowse link ISO 1 135,571,777 135,573,295 RGD:1624291 RGD
G Mesp1 mesoderm posterior 1 homolog (mouse) GBrowse link IEA 1 135,571,777 135,573,295 RGD:1600115 ENSEMBL
negative regulation of heterotypic cell-cell adhesion term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Adipoq adiponectin, C1Q and collagen domain containing GBrowse link ISO 11 79,908,291 79,911,065 RGD:1624291 RGD
G Adipoq adiponectin, C1Q and collagen domain containing GBrowse link ISS 11 79,908,291 79,911,065 RGD:1600115 UniProtKB
G Apoa1 apolipoprotein A-I ISO RGD:1624291 RGD
G Apoa1 apolipoprotein A-I IEA RGD:1600115 ENSEMBL
G Il1rn interleukin 1 receptor antagonist GBrowse link ISO 3 2,607,800 2,613,216 RGD:1624291 RGD
G Il1rn interleukin 1 receptor antagonist GBrowse link IEA 3 2,607,800 2,613,216 RGD:1600115 ENSEMBL
G Klf4 Kruppel-like factor 4 (gut) GBrowse link ISO 5 73,446,928 73,451,286 RGD:1624291 RGD
G Klf4 Kruppel-like factor 4 (gut) GBrowse link IEA 5 73,446,928 73,451,286 RGD:1600115 ENSEMBL
G Map2k5 mitogen activated protein kinase kinase 5 GBrowse link IMP 8 67,313,472 67,542,723 BHF-UCL
G Mapk7 mitogen-activated protein kinase 7 GBrowse link ISO 10 47,649,203 47,654,316 RGD:1624291 RGD
negative regulation of mesodermal cell fate specification term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Dkk1 dickkopf 1 homolog (Xenopus laevis) GBrowse link ISO 1 234,392,743 234,396,426 RGD:1624291 RGD
G Mesp1 mesoderm posterior 1 homolog (mouse) GBrowse link ISO 1 135,571,777 135,573,295 RGD:1624291 RGD
G Mesp1 mesoderm posterior 1 homolog (mouse) GBrowse link IEA 1 135,571,777 135,573,295 RGD:1600115 ENSEMBL
G Sfrp2 secreted frizzled-related protein 2 GBrowse link ISO 2 175,479,320 175,486,865 RGD:1624291 RGD
G Sfrp2 secreted frizzled-related protein 2 GBrowse link IEA 2 175,479,320 175,486,865 RGD:1600115 ENSEMBL
G Sox17 SRY (sex determining region Y)-box 17 GBrowse link ISO 5 15,241,405 15,246,904 RGD:1624291 RGD
G Sox17 SRY (sex determining region Y)-box 17 GBrowse link IEA 5 15,241,405 15,246,904 RGD:1600115 ENSEMBL
paraxial mesoderm formation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Foxc1 forkhead box C1 GBrowse link ISO 17 39,026,186 39,030,163 RGD:1624291 RGD
G Foxc2 forkhead box C2 ISO RGD:1624291 RGD
G Hnf1a HNF1 homeobox A GBrowse link ISO 12 42,919,574 42,945,670 RGD:1624291 RGD
G Hnf1a HNF1 homeobox A GBrowse link IEA 12 42,919,574 42,945,670 RGD:1600115 ENSEMBL
G Htt huntingtin GBrowse link ISO 14 81,490,322 81,636,856 RGD:1624291 RGD
G Htt huntingtin GBrowse link IEA 14 81,490,322 81,636,856 RGD:1600115 ENSEMBL
G Lef1 lymphoid enhancer binding factor 1 GBrowse link ISO 2 228,550,263 228,673,131 RGD:1624291 RGD
G Lef1 lymphoid enhancer binding factor 1 GBrowse link IEA 2 228,550,263 228,673,131 RGD:1600115 ENSEMBL
G Lef1 lymphoid enhancer binding factor 1 GBrowse link IBA 2 228,550,263 228,673,131 RGD:1600115 RefGenome
paraxial mesodermal cell fate commitment term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Foxc2 forkhead box C2 ISO RGD:1624291 RGD
G Foxc2 forkhead box C2 IBA RGD:1600115 RefGenome
G Foxs1 forkhead box S1 GBrowse link IBA 3 143,272,507 143,273,776 RGD:1600115 RefGenome
G Wnt3a wingless-type MMTV integration site family, member 3A GBrowse link ISO 10 45,553,682 45,594,983 RGD:1624291 RGD
positive regulation of gastrulation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Foxa2 forkhead box A2 GBrowse link ISO 3 136,739,009 136,743,204 RGD:1624291 RGD
G Foxa2 forkhead box A2 GBrowse link IEA 3 136,739,009 136,743,204 RGD:1600115 ENSEMBL
G Foxa2 forkhead box A2 GBrowse link ISS 3 136,739,009 136,743,204 RGD:1600115 UniProtKB
G Gnb2l1 guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1 GBrowse link ISS 10 34,067,237 34,072,593 RGD:1600115 UniProtKB
G Lhx1 LIM homeobox 1 GBrowse link ISO 10 72,800,497 72,805,799 RGD:1624291 RGD
G Lhx1 LIM homeobox 1 GBrowse link ISS 10 72,800,497 72,805,799 RGD:1600115 UniProtKB
G Osr1 odd-skipped related 1 (Drosophila) GBrowse link ISS 6 33,074,410 33,076,769 RGD:1600115 UniProtKB
G Osr1 odd-skipped related 1 (Drosophila) GBrowse link ISO 6 33,074,410 33,076,769 RGD:1624291 RGD
G Osr2 odd-skipped related 2 (Drosophila) GBrowse link ISO 7 70,769,123 70,776,248 RGD:1624291 RGD
G Osr2 odd-skipped related 2 (Drosophila) GBrowse link IEA 7 70,769,123 70,776,248 RGD:1600115 ENSEMBL
G Otx2 orthodenticle homeobox 2 GBrowse link ISO 15 24,622,851 24,632,435 RGD:1624291 RGD
G Scx scleraxis GBrowse link ISO 7 114,504,701 114,506,719 RGD:1624291 RGD
G Scx scleraxis GBrowse link IEA 7 114,504,701 114,506,719 RGD:1600115 ENSEMBL
positive regulation of heterotypic cell-cell adhesion term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Alox15 arachidonate 15-lipoxygenase GBrowse link IMP 10 57,185,939 57,194,388 RGD:5509796 RGD
G Bmp7 bone morphogenetic protein 7 GBrowse link ISO 3 163,723,429 163,799,567 RGD:1624291 RGD
G Bmp7 bone morphogenetic protein 7 GBrowse link IEA 3 163,723,429 163,799,567 RGD:1600115 ENSEMBL
G Cd44 Cd44 molecule GBrowse link ISO 3 88,022,962 88,110,352 RGD:1624291 RGD
G Cd44 Cd44 molecule GBrowse link IEA 3 88,022,962 88,110,352 RGD:1600115 ENSEMBL
G Il1b interleukin 1 beta GBrowse link ISO 3 116,964,422 116,970,867 RGD:1624291 RGD
G Il1b interleukin 1 beta GBrowse link IEA 3 116,964,422 116,970,867 RGD:1600115 ENSEMBL
G Tnf tumor necrosis factor GBrowse link ISO 20 3,661,000 3,663,618 RGD:1624291 RGD
G Tnf tumor necrosis factor GBrowse link ISO 20 3,661,000 3,663,618 RGD:1624291 RGD
G Tnf tumor necrosis factor GBrowse link IEA 20 3,661,000 3,663,618 RGD:1600115 ENSEMBL
positive regulation of mesodermal cell fate specification term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Wnt3a wingless-type MMTV integration site family, member 3A GBrowse link ISO 10 45,553,682 45,594,983 RGD:1624291 RGD
primitive streak formation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Foxa2 forkhead box A2 GBrowse link ISO 3 136,739,009 136,743,204 RGD:1624291 RGD
G Foxa2 forkhead box A2 GBrowse link IEA 3 136,739,009 136,743,204 RGD:1600115 ENSEMBL
G Foxa2 forkhead box A2 GBrowse link ISS 3 136,739,009 136,743,204 RGD:1600115 UniProtKB
G Gdf3 growth differentiation factor 3 GBrowse link ISO 4 159,064,054 159,067,854 RGD:1624291 RGD
G Gdf3 growth differentiation factor 3 GBrowse link IEA 4 159,064,054 159,067,854 RGD:1600115 ENSEMBL
G Hhex hematopoietically expressed homeobox GBrowse link ISO 1 241,736,542 241,742,129 RGD:1624291 RGD
G Hhex hematopoietically expressed homeobox GBrowse link IEA 1 241,736,542 241,742,129 RGD:1600115 ENSEMBL
G Lhx1 LIM homeobox 1 GBrowse link ISO 10 72,800,497 72,805,799 RGD:1624291 RGD
G Lhx1 LIM homeobox 1 GBrowse link ISS 10 72,800,497 72,805,799 RGD:1600115 UniProtKB
G Lrp6 low density lipoprotein receptor-related protein 6 GBrowse link ISO 4 171,337,114 171,444,932 RGD:1624291 RGD
G Lrp6 low density lipoprotein receptor-related protein 6 GBrowse link IBA 4 171,337,114 171,444,932 RGD:1600115 RefGenome
G Nodal nodal growth differentiation factor GBrowse link ISO 20 29,546,982 29,555,419 RGD:1624291 RGD
G Otx2 orthodenticle homeobox 2 GBrowse link ISO 15 24,622,851 24,632,435 RGD:1624291 RGD
G Otx2 orthodenticle homeobox 2 GBrowse link IEA 15 24,622,851 24,632,435 RGD:1600115 ENSEMBL
G Srf serum response factor (c-fos serum response element-binding transcription factor) GBrowse link ISO 9 9,788,378 9,797,639 RGD:1624291 RGD
G Wnt5a wingless-type MMTV integration site family, member 5A GBrowse link ISO 16 3,782,025 3,799,625 RGD:1624291 RGD
G Wnt5a wingless-type MMTV integration site family, member 5A GBrowse link IEA 16 3,782,025 3,799,625 RGD:1600115 ENSEMBL
regulation of endodermal cell fate specification term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Dkk1 dickkopf 1 homolog (Xenopus laevis) GBrowse link ISO 1 234,392,743 234,396,426 RGD:1624291 RGD
G Dusp6 dual specificity phosphatase 6 GBrowse link IBA 7 36,893,264 36,897,494 RGD:1600115 RefGenome
G Hnf1b HNF1 homeobox B GBrowse link ISO 10 72,081,091 72,187,014 RGD:1624291 RGD
regulation of gastrulation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Hnf4a hepatocyte nuclear factor 4, alpha GBrowse link ISO 3 154,459,863 154,482,825 RGD:1624291 RGD
G Hnf4a hepatocyte nuclear factor 4, alpha GBrowse link IEA 3 154,459,863 154,482,825 RGD:1600115 ENSEMBL
G Nodal nodal growth differentiation factor GBrowse link IEA 20 29,546,982 29,555,419 RGD:1600115 ENSEMBL
G Nodal nodal growth differentiation factor GBrowse link ISO 20 29,546,982 29,555,419 RGD:1624291 RGD
G Tgif1 TGFB-induced factor homeobox 1 GBrowse link ISO 9 110,043,164 110,052,783 RGD:1624291 RGD
G Tgif1 TGFB-induced factor homeobox 1 GBrowse link IEA 9 110,043,164 110,052,783 RGD:1600115 ENSEMBL
regulation of lateral mesodermal cell fate specification term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Bmpr1a bone morphogenetic protein receptor, type IA GBrowse link ISO 16 10,061,943 10,105,854 RGD:1624291 RGD
G Bmpr1a bone morphogenetic protein receptor, type IA GBrowse link IEA 16 10,061,943 10,105,854 RGD:1600115 ENSEMBL
G Fgfr1 Fibroblast growth factor receptor 1 GBrowse link ISO 16 70,869,974 70,910,045 RGD:1624291 RGD
G Fgfr1 Fibroblast growth factor receptor 1 GBrowse link IEA 16 70,869,974 70,910,045 RGD:1600115 ENSEMBL
regulation of mesodermal cell fate specification term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Sox17 SRY (sex determining region Y)-box 17 GBrowse link ISO 5 15,241,405 15,246,904 RGD:1624291 RGD
regulation of transcription from RNA polymerase II promoter involved in definitive endodermal cell fate specification term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Sox17 SRY (sex determining region Y)-box 17 GBrowse link ISO 5 15,241,405 15,246,904 RGD:1624291 RGD
G Sox17 SRY (sex determining region Y)-box 17 GBrowse link IEA 5 15,241,405 15,246,904 RGD:1600115 ENSEMBL
transforming growth factor beta receptor signaling pathway involved in primitive streak formation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Nodal nodal growth differentiation factor GBrowse link ISO 20 29,546,982 29,555,419 RGD:1624291 RGD
G Nodal nodal growth differentiation factor GBrowse link IEA 20 29,546,982 29,555,419 RGD:1600115 ENSEMBL
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 135967
    developmental process 29431
      single-organism developmental process 22738
        embryonic morphogenesis 1976
          gastrulation 352
            cell migration involved in gastrulation + 28
            cell-cell adhesion involved in gastrulation + 22
            convergent extension involved in gastrulation + 2
            epithelial cell morphogenesis involved in gastrulation + 0
            formation of primary germ layer + 194
            gastrulation with mouth forming first + 0
            gastrulation with mouth forming second + 61
            mesendoderm migration + 2
            mesodermal to mesenchymal transition involved in gastrulation + 1
            negative regulation of gastrulation 0
            positive regulation of gastrulation 13
            regulation of gastrulation + 60
Path 2
Term Annotations click to browse term
  biological_process 135967
    single-organism process 88399
      single-multicellular organism process 36068
        multicellular organismal development 24588
          embryo development 3602
            embryonic morphogenesis 1976
              gastrulation 352
                cell migration involved in gastrulation + 28
                cell-cell adhesion involved in gastrulation + 22
                convergent extension involved in gastrulation + 2
                epithelial cell morphogenesis involved in gastrulation + 0
                formation of primary germ layer + 194
                gastrulation with mouth forming first + 0
                gastrulation with mouth forming second + 61
                mesendoderm migration + 2
                mesodermal to mesenchymal transition involved in gastrulation + 1
                negative regulation of gastrulation 0
                positive regulation of gastrulation 13
                regulation of gastrulation + 60
paths to the root

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