CDH23 (cadherin related 23) - Rat Genome Database

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Gene: CDH23 (cadherin related 23) Canis lupus familiaris
Analyze
Symbol: CDH23
Name: cadherin related 23
RGD ID: 12201749
Description: ENCODES a protein that exhibits cadherin binding (inferred); calcium ion binding (inferred); INVOLVED IN adult locomotory behavior (ortholog); auditory receptor cell stereocilium organization (ortholog); cochlea development (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; retinitis pigmentosa pathway; ASSOCIATED WITH atypical Gaucher's disease due to saposin C deficiency (ortholog); Atypical Krabbe Disease due to Saposin A Deficiency (ortholog); autosomal recessive nonsyndromic deafness (ortholog); FOUND IN apical part of cell (ortholog); centrosome (ortholog); cochlear hair cell ribbon synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cadherin-23
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1422,206,972 - 22,570,875 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl422,207,001 - 22,571,131 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha422,343,327 - 22,708,459 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0422,485,192 - 22,847,328 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl422,438,303 - 22,847,265 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1422,382,421 - 22,753,409 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0422,588,293 - 22,952,028 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0422,941,027 - 23,306,533 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
CDH23
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1422,206,972 - 22,570,875 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl422,207,001 - 22,571,131 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha422,343,327 - 22,708,459 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0422,485,192 - 22,847,328 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl422,438,303 - 22,847,265 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1422,382,421 - 22,753,409 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0422,588,293 - 22,952,028 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0422,941,027 - 23,306,533 (+)NCBIUU_Cfam_GSD_1.0
CDH23
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381071,396,920 - 71,815,947 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1071,396,920 - 71,815,947 (+)EnsemblGRCh38hg38GRCh38
GRCh371073,156,677 - 73,575,704 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361072,826,697 - 73,245,710 (+)NCBINCBI36Build 36hg18NCBI36
Build 341072,826,696 - 73,076,543NCBI
Celera1066,439,492 - 66,858,274 (+)NCBICelera
Cytogenetic Map10q22.1NCBI
HuRef1067,150,783 - 67,156,961 (+)NCBIHuRef
CHM1_11073,439,263 - 73,857,682 (+)NCBICHM1_1
T2T-CHM13v2.01072,266,464 - 72,686,680 (+)NCBIT2T-CHM13v2.0
Cdh23
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391060,138,527 - 60,532,291 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1060,138,527 - 60,532,269 (-)EnsemblGRCm39 Ensembl
GRCm381060,302,748 - 60,696,513 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1060,302,748 - 60,696,490 (-)EnsemblGRCm38mm10GRCm38
MGSCv371059,766,022 - 60,159,238 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361059,698,731 - 60,052,690 (-)NCBIMGSCv36mm8
Celera1061,400,142 - 61,796,629 (-)NCBICelera
Cytogenetic Map10B4NCBI
cM Map1030.11NCBI
Cdh23
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82028,783,124 - 29,165,624 (-)NCBIGRCr8
mRatBN7.22028,240,643 - 28,622,490 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2028,240,645 - 28,622,419 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2029,255,533 - 29,637,791 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02028,641,839 - 29,024,097 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02029,384,303 - 29,766,584 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02029,857,018 - 30,263,758 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2029,857,637 - 29,990,111 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02031,668,747 - 32,073,985 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42027,622,049 - 28,016,145 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12027,635,850 - 28,029,945 (-)NCBI
Celera2029,678,961 - 30,059,893 (-)NCBICelera
Cytogenetic Map20q11NCBI
Cdh23
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543719,684,473 - 20,003,819 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543719,683,792 - 20,044,718 (-)NCBIChiLan1.0ChiLan1.0
LOC100983880
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2883,888,821 - 83,966,281 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11083,894,144 - 83,971,602 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01067,866,979 - 68,286,008 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11070,391,661 - 70,810,240 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1070,434,801 - 70,810,240 (+)Ensemblpanpan1.1panPan2
LOC101969963
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721358,586,064 - 58,899,858 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365217,010,360 - 7,340,842 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365217,078,874 - 7,285,361 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CDH23
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1474,223,089 - 74,733,834 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11474,267,547 - 74,734,623 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21480,226,063 - 80,626,249 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103216037
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1959,475,126 - 59,893,824 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604820,118,874 - 20,208,512 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cdh23
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247545,393,733 - 5,724,876 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247545,356,006 - 5,725,774 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CDH23
5835 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium
Low 3 5 12 6 6 4 12 8 8 6
Below cutoff 2 10 6 6 2 2

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022417540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022417541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022417542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022417543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022417544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038598570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038598571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038598572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038598573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038598574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038598575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038662841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038662842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038662843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038662844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038662846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038662847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002625697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000022666   ⟹   ENSCAFP00000021050
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl422,207,001 - 22,570,131 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000065066   ⟹   ENSCAFP00000065282
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl422,481,055 - 22,571,131 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845008129   ⟹   ENSCAFP00845006383
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl422,438,303 - 22,846,672 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845008151   ⟹   ENSCAFP00845006404
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl422,765,002 - 22,847,265 (+)Ensembl
RefSeq Acc Id: XM_022417541   ⟹   XP_022273249
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1422,206,974 - 22,570,875 (+)NCBI
Dog10K_Boxer_Tasha422,343,327 - 22,708,459 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022417543   ⟹   XP_022273251
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1422,206,972 - 22,416,132 (+)NCBI
Dog10K_Boxer_Tasha422,343,327 - 22,553,779 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022417544   ⟹   XP_022273252
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1422,206,974 - 22,570,875 (+)NCBI
Dog10K_Boxer_Tasha422,343,327 - 22,708,459 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038473192   ⟹   XP_038329120
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1422,382,421 - 22,753,409 (+)NCBI
RefSeq Acc Id: XM_038473193   ⟹   XP_038329121
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1422,382,421 - 22,753,409 (+)NCBI
RefSeq Acc Id: XM_038473194   ⟹   XP_038329122
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1422,382,421 - 22,752,578 (+)NCBI
RefSeq Acc Id: XM_038473195   ⟹   XP_038329123
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1422,382,421 - 22,682,602 (+)NCBI
RefSeq Acc Id: XM_038473196   ⟹   XP_038329124
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1422,382,421 - 22,592,719 (+)NCBI
RefSeq Acc Id: XM_038473197   ⟹   XP_038329125
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1422,382,421 - 22,753,409 (+)NCBI
RefSeq Acc Id: XM_038490919   ⟹   XP_038346847
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha422,343,327 - 22,708,459 (+)NCBI
RefSeq Acc Id: XM_038490934   ⟹   XP_038346862
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha422,343,327 - 22,707,626 (+)NCBI
RefSeq Acc Id: XM_038490939   ⟹   XP_038346867
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha422,343,327 - 22,637,233 (+)NCBI
RefSeq Acc Id: XM_038534255   ⟹   XP_038390183
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0422,941,027 - 23,306,533 (+)NCBI
RefSeq Acc Id: XM_038534256   ⟹   XP_038390184
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0422,941,027 - 23,306,533 (+)NCBI
RefSeq Acc Id: XM_038534257   ⟹   XP_038390185
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0422,941,027 - 23,305,700 (+)NCBI
RefSeq Acc Id: XM_038534258   ⟹   XP_038390186
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0422,941,027 - 23,235,264 (+)NCBI
RefSeq Acc Id: XM_038534259   ⟹   XP_038390187
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0422,941,027 - 23,151,810 (+)NCBI
RefSeq Acc Id: XM_038534260   ⟹   XP_038390188
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0422,941,027 - 23,306,533 (+)NCBI
RefSeq Acc Id: XM_038598570   ⟹   XP_038454498
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0422,588,293 - 22,952,028 (+)NCBI
RefSeq Acc Id: XM_038598571   ⟹   XP_038454499
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0422,588,293 - 22,952,028 (+)NCBI
RefSeq Acc Id: XM_038598572   ⟹   XP_038454500
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0422,588,293 - 22,951,195 (+)NCBI
RefSeq Acc Id: XM_038598573   ⟹   XP_038454501
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0422,588,293 - 22,880,756 (+)NCBI
RefSeq Acc Id: XM_038598574   ⟹   XP_038454502
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0422,588,293 - 22,797,363 (+)NCBI
RefSeq Acc Id: XM_038598575   ⟹   XP_038454503
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0422,588,293 - 22,952,028 (+)NCBI
RefSeq Acc Id: XM_038662841   ⟹   XP_038518769
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0422,485,192 - 22,847,328 (+)NCBI
RefSeq Acc Id: XM_038662842   ⟹   XP_038518770
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0422,485,192 - 22,847,328 (+)NCBI
RefSeq Acc Id: XM_038662843   ⟹   XP_038518771
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0422,485,192 - 22,846,495 (+)NCBI
RefSeq Acc Id: XM_038662844   ⟹   XP_038518772
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0422,485,192 - 22,775,845 (+)NCBI
RefSeq Acc Id: XM_038662846   ⟹   XP_038518774
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0422,485,192 - 22,692,409 (+)NCBI
RefSeq Acc Id: XM_038662847   ⟹   XP_038518775
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0422,485,192 - 22,847,328 (+)NCBI
Protein Sequences
Protein RefSeqs XP_022273249 (Get FASTA)   NCBI Sequence Viewer  
  XP_022273251 (Get FASTA)   NCBI Sequence Viewer  
  XP_022273252 (Get FASTA)   NCBI Sequence Viewer  
  XP_038329120 (Get FASTA)   NCBI Sequence Viewer  
  XP_038329121 (Get FASTA)   NCBI Sequence Viewer  
  XP_038329122 (Get FASTA)   NCBI Sequence Viewer  
  XP_038329123 (Get FASTA)   NCBI Sequence Viewer  
  XP_038329124 (Get FASTA)   NCBI Sequence Viewer  
  XP_038329125 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346847 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346862 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346867 (Get FASTA)   NCBI Sequence Viewer  
  XP_038390183 (Get FASTA)   NCBI Sequence Viewer  
  XP_038390184 (Get FASTA)   NCBI Sequence Viewer  
  XP_038390185 (Get FASTA)   NCBI Sequence Viewer  
  XP_038390186 (Get FASTA)   NCBI Sequence Viewer  
  XP_038390187 (Get FASTA)   NCBI Sequence Viewer  
  XP_038390188 (Get FASTA)   NCBI Sequence Viewer  
  XP_038454498 (Get FASTA)   NCBI Sequence Viewer  
  XP_038454499 (Get FASTA)   NCBI Sequence Viewer  
  XP_038454500 (Get FASTA)   NCBI Sequence Viewer  
  XP_038454501 (Get FASTA)   NCBI Sequence Viewer  
  XP_038454502 (Get FASTA)   NCBI Sequence Viewer  
  XP_038454503 (Get FASTA)   NCBI Sequence Viewer  
  XP_038518769 (Get FASTA)   NCBI Sequence Viewer  
  XP_038518770 (Get FASTA)   NCBI Sequence Viewer  
  XP_038518771 (Get FASTA)   NCBI Sequence Viewer  
  XP_038518772 (Get FASTA)   NCBI Sequence Viewer  
  XP_038518774 (Get FASTA)   NCBI Sequence Viewer  
  XP_038518775 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000021050.5
  ENSCAFP00000065282.2
  ENSCAFP00030020012.1
  ENSCAFP00030020375.1
  ENSCAFP00030020471.1
  ENSCAFP00040000391.1
  ENSCAFP00040000418.1
  ENSCAFP00845006383
  ENSCAFP00845006383.1
  ENSCAFP00845006404.1
RefSeq Acc Id: XP_022273251   ⟸   XM_022417543
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_022273252   ⟸   XM_022417544
- Peptide Label: isoform X6
- UniProtKB: A0A8P0SIR9 (UniProtKB/TrEMBL),   A0A8C0PKB9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022273249   ⟸   XM_022417541
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PKB9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000065282   ⟸   ENSCAFT00000065066
RefSeq Acc Id: ENSCAFP00000021050   ⟸   ENSCAFT00000022666
RefSeq Acc Id: XP_038329120   ⟸   XM_038473192
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038329125   ⟸   XM_038473197
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038329121   ⟸   XM_038473193
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038329122   ⟸   XM_038473194
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038329123   ⟸   XM_038473195
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038329124   ⟸   XM_038473196
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038454498   ⟸   XM_038598570
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038454503   ⟸   XM_038598575
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038454499   ⟸   XM_038598571
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038454500   ⟸   XM_038598572
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038454501   ⟸   XM_038598573
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038454502   ⟸   XM_038598574
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038518769   ⟸   XM_038662841
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RIM7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038518775   ⟸   XM_038662847
- Peptide Label: isoform X6
- UniProtKB: A0A8I3MT75 (UniProtKB/TrEMBL),   A0A8C0RIM7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038518770   ⟸   XM_038662842
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RIM7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038518771   ⟸   XM_038662843
- Peptide Label: isoform X3
- UniProtKB: A0A8C0PKB9 (UniProtKB/TrEMBL),   A0A8C0RIM7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038518772   ⟸   XM_038662844
- Peptide Label: isoform X4
- UniProtKB: A0A8C0N263 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038518774   ⟸   XM_038662846
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038346847   ⟸   XM_038490919
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PKB9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038346862   ⟸   XM_038490934
- Peptide Label: isoform X3
- UniProtKB: A0A8C0PKB9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038346867   ⟸   XM_038490939
- Peptide Label: isoform X4
- UniProtKB: A0A8C0N263 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390183   ⟸   XM_038534255
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PKB9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390188   ⟸   XM_038534260
- Peptide Label: isoform X6
- UniProtKB: A0A8C0PKB9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390184   ⟸   XM_038534256
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PKB9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390185   ⟸   XM_038534257
- Peptide Label: isoform X3
- UniProtKB: A0A8C0PKB9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390186   ⟸   XM_038534258
- Peptide Label: isoform X4
- UniProtKB: A0A8C0N263 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390187   ⟸   XM_038534259
- Peptide Label: isoform X5
RefSeq Acc Id: ENSCAFP00845006383   ⟸   ENSCAFT00845008129
RefSeq Acc Id: ENSCAFP00845006404   ⟸   ENSCAFT00845008151
Protein Domains
Cadherin


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000014229 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030012040 UniProtKB/TrEMBL
  ENSCAFG00040000272 UniProtKB/TrEMBL
  ENSCAFG00845004526 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000022666.5 UniProtKB/TrEMBL
  ENSCAFT00000065066.2 UniProtKB/TrEMBL
  ENSCAFT00030022940.1 UniProtKB/TrEMBL
  ENSCAFT00030023370.1 UniProtKB/TrEMBL
  ENSCAFT00030023484.1 UniProtKB/TrEMBL
  ENSCAFT00040000477.1 UniProtKB/TrEMBL
  ENSCAFT00040000510.1 UniProtKB/TrEMBL
  ENSCAFT00845008129 ENTREZGENE
  ENSCAFT00845008129.1 UniProtKB/TrEMBL
  ENSCAFT00845008151.1 UniProtKB/TrEMBL
Gene3D-CATH Cadherins UniProtKB/TrEMBL
InterPro Cadherin UniProtKB/TrEMBL
  Cadherin-like_dom UniProtKB/TrEMBL
  Cadherin-like_sf UniProtKB/TrEMBL
  Cadherin_CS UniProtKB/TrEMBL
NCBI Gene CDH23 ENTREZGENE
PANTHER CADHERIN RELATED 23 UniProtKB/TrEMBL
  CADHERIN-23 UniProtKB/TrEMBL
  CADHERIN-23 UniProtKB/TrEMBL
  CADHERIN-87A UniProtKB/TrEMBL
  CADHERIN-87A UniProtKB/TrEMBL
  FAT ATYPICAL CADHERIN-RELATED UniProtKB/TrEMBL
  STARRY NIGHT UniProtKB/TrEMBL
Pfam Cadherin UniProtKB/TrEMBL
PRINTS CADHERIN UniProtKB/TrEMBL
PROSITE CADHERIN_1 UniProtKB/TrEMBL
  CADHERIN_2 UniProtKB/TrEMBL
  PROKAR_LIPOPROTEIN UniProtKB/TrEMBL
SMART SM00112 UniProtKB/TrEMBL
Superfamily-SCOP SSF49313 UniProtKB/TrEMBL
UniProt A0A8C0N263 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PKB9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PWY7_CANLF UniProtKB/TrEMBL
  A0A8C0RIM7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RIR4_CANLF UniProtKB/TrEMBL
  A0A8I3MSK0_CANLF UniProtKB/TrEMBL
  A0A8I3MT75 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SIR9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0TGQ6_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:50871 ENTREZGENE