ACVR2A (activin A receptor type 2A) - Rat Genome Database

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Gene: ACVR2A (activin A receptor type 2A) Canis lupus familiaris
Analyze
Symbol: ACVR2A
Name: activin A receptor type 2A
RGD ID: 12323815
Description: ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity (ortholog); BMP receptor activity (ortholog); INVOLVED IN adrenal gland development (ortholog); anterior/posterior pattern specification (ortholog); autophagy (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 1 (ortholog); colon cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); inhibin-betaglycan-ActRII complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: activin receptor type-2A
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11949,642,429 - 49,726,720 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1949,641,219 - 49,723,420 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1949,765,961 - 49,850,433 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01951,114,507 - 51,199,229 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1951,113,374 - 51,198,144 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11949,760,723 - 49,845,201 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01949,894,649 - 49,979,187 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01951,291,788 - 51,376,557 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ACVR2A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11949,642,429 - 49,726,720 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1949,641,219 - 49,723,420 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1949,765,961 - 49,850,433 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01951,114,507 - 51,199,229 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1951,113,374 - 51,198,144 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11949,760,723 - 49,845,201 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01949,894,649 - 49,979,187 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01951,291,788 - 51,376,557 (+)NCBIUU_Cfam_GSD_1.0
ACVR2A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382147,844,517 - 147,930,822 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2147,844,517 - 147,930,826 (+)EnsemblGRCh38hg38GRCh38
GRCh372148,602,086 - 148,688,391 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362148,319,040 - 148,404,863 (+)NCBINCBI36Build 36hg18NCBI36
Build 342148,436,303 - 148,519,242NCBI
Celera2142,316,710 - 142,402,536 (+)NCBICelera
Cytogenetic Map2q22.3-q23.1NCBI
HuRef2140,599,673 - 140,685,765 (+)NCBIHuRef
CHM1_12148,607,725 - 148,694,041 (+)NCBICHM1_1
T2T-CHM13v2.02148,294,972 - 148,381,274 (+)NCBIT2T-CHM13v2.0
Acvr2a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39248,704,121 - 48,793,276 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl248,704,121 - 48,793,281 (+)EnsemblGRCm39 Ensembl
GRCm38248,814,109 - 48,903,264 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl248,814,109 - 48,903,269 (+)EnsemblGRCm38mm10GRCm38
MGSCv37248,669,629 - 48,758,784 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36248,636,166 - 48,724,172 (+)NCBIMGSCv36mm8
Celera250,486,791 - 50,575,736 (+)NCBICelera
Cytogenetic Map2C1.1NCBI
cM Map228.38NCBI
Acvr2a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8353,614,143 - 53,701,933 (+)NCBIGRCr8
mRatBN7.2333,204,961 - 33,292,673 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl333,205,523 - 33,289,968 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx336,594,864 - 36,673,345 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0345,179,586 - 45,258,078 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0343,001,947 - 43,080,473 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0332,947,901 - 33,034,598 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl332,947,378 - 33,034,282 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0338,113,728 - 38,197,531 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4329,779,827 - 29,808,881 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1329,676,198 - 29,705,253 (+)NCBI
Celera331,412,348 - 31,490,813 (+)NCBICelera
Cytogenetic Map3q12NCBI
Acvr2a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544013,849,926 - 13,931,374 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544013,849,926 - 13,931,374 (+)NCBIChiLan1.0ChiLan1.0
ACVR2A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21327,001,835 - 27,089,040 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B27,016,285 - 27,103,522 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B11,933,683 - 12,020,287 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B152,253,843 - 152,288,385 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B152,253,826 - 152,288,385 (+)Ensemblpanpan1.1panPan2
Acvr2a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303112,344,483 - 112,422,388 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493646929,194,908 - 29,273,196 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493646929,195,329 - 29,273,237 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACVR2A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl154,173,805 - 4,259,706 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1154,177,333 - 4,259,056 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2153,828,828 - 3,910,559 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ACVR2A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11033,223,902 - 33,311,257 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1033,224,099 - 33,307,720 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040166,228,513 - 166,314,554 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Acvr2a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624866539,894 - 620,302 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624866539,967 - 619,575 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ACVR2A
814 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 1 6 6 10 1 1
Low 4 5 16 6 6 6 6 2 8 9 5
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005631965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038426218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038426219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038502412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038502413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038565135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038565136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038629233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038629235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_852167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000008888   ⟹   ENSCAFP00000008245
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1949,641,219 - 49,723,420 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000075724   ⟹   ENSCAFP00000055829
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1949,641,219 - 49,723,420 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000081141   ⟹   ENSCAFP00000057487
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1949,641,219 - 49,723,420 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845011101   ⟹   ENSCAFP00845008662
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1951,113,374 - 51,198,144 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845011151   ⟹   ENSCAFP00845008695
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1951,114,780 - 51,197,771 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845011205   ⟹   ENSCAFP00845008741
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1951,114,780 - 51,197,771 (+)Ensembl
RefSeq Acc Id: XM_038426218   ⟹   XP_038282146
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01951,114,507 - 51,199,229 (+)NCBI
RefSeq Acc Id: XM_038426219   ⟹   XP_038282147
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01951,160,095 - 51,196,017 (+)NCBI
RefSeq Acc Id: XM_038454689   ⟹   XP_038310617
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1949,811,316 - 49,847,221 (+)NCBI
RefSeq Acc Id: XM_038502412   ⟹   XP_038358340
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11949,760,723 - 49,845,201 (+)NCBI
RefSeq Acc Id: XM_038502413   ⟹   XP_038358341
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11949,806,101 - 49,841,988 (+)NCBI
RefSeq Acc Id: XM_038565135   ⟹   XP_038421063
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01951,291,788 - 51,376,557 (+)NCBI
RefSeq Acc Id: XM_038565136   ⟹   XP_038421064
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01951,337,381 - 51,373,343 (+)NCBI
RefSeq Acc Id: XM_038629233   ⟹   XP_038485161
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01949,894,649 - 49,979,187 (+)NCBI
RefSeq Acc Id: XM_038629235   ⟹   XP_038485163
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01949,940,018 - 49,975,974 (+)NCBI
RefSeq Acc Id: XM_852167   ⟹   XP_857260
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11949,642,429 - 49,723,507 (+)NCBI
Dog10K_Boxer_Tasha1949,765,961 - 49,850,433 (+)NCBI
Sequence:
RefSeq Acc Id: XP_857260   ⟸   XM_852167
- Peptide Label: isoform X1
- UniProtKB: A0A8C0Z3E6 (UniProtKB/TrEMBL),   A0A8C0R225 (UniProtKB/TrEMBL),   A0A8I3MYH0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000008245   ⟸   ENSCAFT00000008888
RefSeq Acc Id: ENSCAFP00000055829   ⟸   ENSCAFT00000075724
RefSeq Acc Id: ENSCAFP00000057487   ⟸   ENSCAFT00000081141
RefSeq Acc Id: XP_038358340   ⟸   XM_038502412
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038358341   ⟸   XM_038502413
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038485161   ⟸   XM_038629233
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038485163   ⟸   XM_038629235
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038282146   ⟸   XM_038426218
- Peptide Label: isoform X1
- UniProtKB: A0A8C0Z3E6 (UniProtKB/TrEMBL),   A0A8C0R225 (UniProtKB/TrEMBL),   A0A8I3MYH0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038282147   ⟸   XM_038426219
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038310617   ⟸   XM_038454689
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038421063   ⟸   XM_038565135
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R225 (UniProtKB/TrEMBL),   A0A8C0Z3E6 (UniProtKB/TrEMBL),   A0A8I3MYH0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038421064   ⟸   XM_038565136
- Peptide Label: isoform X2
RefSeq Acc Id: ENSCAFP00845008741   ⟸   ENSCAFT00845011205
RefSeq Acc Id: ENSCAFP00845008695   ⟸   ENSCAFT00845011151
RefSeq Acc Id: ENSCAFP00845008662   ⟸   ENSCAFT00845011101
Protein Domains
Protein kinase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000005507 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030015234 UniProtKB/TrEMBL
  ENSCAFG00040020986 UniProtKB/TrEMBL
  ENSCAFG00845006266 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000008888.5 UniProtKB/TrEMBL
  ENSCAFT00000081141.2 UniProtKB/TrEMBL
  ENSCAFT00030028138.1 UniProtKB/TrEMBL
  ENSCAFT00030028252.1 UniProtKB/TrEMBL
  ENSCAFT00030028326.1 UniProtKB/TrEMBL
  ENSCAFT00040038896.1 UniProtKB/TrEMBL
  ENSCAFT00040038971.1 UniProtKB/TrEMBL
  ENSCAFT00040039039.1 UniProtKB/TrEMBL
  ENSCAFT00845011101.1 UniProtKB/TrEMBL
  ENSCAFT00845011151.1 UniProtKB/TrEMBL
  ENSCAFT00845011205 ENTREZGENE
  ENSCAFT00845011205.1 UniProtKB/TrEMBL
Gene3D-CATH 2.10.60.10 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Activin_recp UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
  Snake_toxin-like_sf UniProtKB/TrEMBL
  TGFB_receptor UniProtKB/TrEMBL
NCBI Gene ACVR2A ENTREZGENE
PANTHER ACTIVIN RECEPTOR TYPE-2A UniProtKB/TrEMBL
  PTHR23255 UniProtKB/TrEMBL
Pfam Activin_recp UniProtKB/TrEMBL
  Pkinase UniProtKB/TrEMBL
PRINTS ACTIVIN2R UniProtKB/TrEMBL
PROSITE PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/TrEMBL
  SSF57302 UniProtKB/TrEMBL
UniProt A0A8C0NEU5_CANLF UniProtKB/TrEMBL
  A0A8C0NGY3_CANLF UniProtKB/TrEMBL
  A0A8C0R225 ENTREZGENE
  A0A8C0TCX8_CANLF UniProtKB/TrEMBL
  A0A8C0Z3E6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MUB5_CANLF UniProtKB/TrEMBL
  A0A8I3MYH0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3N281_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:37564 ENTREZGENE