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ONTOLOGY REPORT - ANNOTATIONS

Term:chromatin binding
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Accession:GO:0003682 term browser browse the term
Definition:Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
Synonyms:narrow_synonym: lamin/chromatin binding;   nuclear membrane vesicle binding to chromatin
 related_synonym: microtubule/chromatin interaction

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chromatin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss2 acyl-CoA synthetase short chain family member 2 enables ISO (MGI:6094560|PMID:28562591) UniProt PMID:28562591 MGI:6094560 NCBI chrNW_004936561:5,794,685...5,842,619
Ensembl chrNW_004936561:5,795,077...5,842,676 		JBrowse link
G Actl6a actin like 6A enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936566:3,577,412...3,587,182
Ensembl chrNW_004936566:3,573,974...3,595,534 		JBrowse link
G Actl6b actin like 6B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936543:683,301...696,485
Ensembl chrNW_004936543:683,039...696,508 		JBrowse link
G Actrt1 actin related protein T1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936479:3,278,795...3,279,928
Ensembl chrNW_004936479:3,278,795...3,279,928 		JBrowse link
G Adnp activity dependent neuroprotector homeobox enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:3,855,113...3,883,036
Ensembl chrNW_004936514:3,855,672...3,885,718 		JBrowse link
G Aire autoimmune regulator enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:125,589...137,071
Ensembl chrNW_004936500:125,795...137,056 		JBrowse link
G Ajuba ajuba LIM protein enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:1,331,568...1,341,854
Ensembl chrNW_004936722:1,331,566...1,341,863 		JBrowse link
G Ankrd17 ankyrin repeat domain 17 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936598:2,191,604...2,338,832
Ensembl chrNW_004936598:2,191,735...2,340,453 		JBrowse link
G Ankrd2 ankyrin repeat domain 2 enables ISO (PMID:24434510) MGI PMID:24434510 NCBI chrNW_004936636:2,125,796...2,137,234
Ensembl chrNW_004936636:2,125,787...2,136,870 		JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:452,682...476,533
Ensembl chrNW_004936842:452,681...476,513 		JBrowse link
G App amyloid beta precursor protein enables ISO (PMID:19057576) ARUK-UCL PMID:19057576 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286 		JBrowse link
G Aptx aprataxin enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:1,569,610...1,582,103
Ensembl chrNW_004936524:1,570,627...1,576,329 		JBrowse link
G Ar androgen receptor enables ISO
IEA		 RGD
Ensembl		 PMID:3499428 GO_REF:0000107 RGD:10043310 NCBI chrNW_004936635:485,903...647,820
Ensembl chrNW_004936635:485,903...647,932 		JBrowse link
G Arid3a AT-rich interaction domain 3A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:389,213...418,360
Ensembl chrNW_004936588:394,469...415,893 		JBrowse link
G Arid3c AT-rich interaction domain 3C enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:2,705,112...2,711,557
Ensembl chrNW_004936524:2,705,121...2,711,557 		JBrowse link
G Arid5a AT-rich interaction domain 5A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936744:539,150...545,021
Ensembl chrNW_004936744:537,168...546,017 		JBrowse link
G Arx aristaless related homeobox enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936836:295,090...306,756
Ensembl chrNW_004936836:295,664...306,756 		JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:11,315,929...11,317,166
Ensembl chrNW_004936492:11,316,417...11,317,166 		JBrowse link
G Asf1a anti-silencing function 1A histone chaperone enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936658:1,699,150...1,713,079
Ensembl chrNW_004936658:1,699,044...1,715,582 		JBrowse link
G Ash1l ASH1 like histone lysine methyltransferase enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936580:4,821,384...4,997,112
Ensembl chrNW_004936580:4,820,142...4,997,112 		JBrowse link
G Asxl1 ASXL transcriptional regulator 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:19,218,494...19,297,188
Ensembl chrNW_004936485:19,227,400...19,298,912 		JBrowse link
G Asxl2 ASXL transcriptional regulator 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936493:6,463,771...6,602,244
Ensembl chrNW_004936493:6,463,744...6,594,252 		JBrowse link
G Asxl3 ASXL transcriptional regulator 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936517:11,064,986...11,074,992
Ensembl chrNW_004936517:11,064,987...11,165,956 		JBrowse link
G Atad2 ATPase family AAA domain containing 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:23,986,895...24,043,609
Ensembl chrNW_004936470:23,986,967...24,043,082 		JBrowse link
G Atad2b ATPase family AAA domain containing 2B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936493:8,012,795...8,147,652
Ensembl chrNW_004936493:8,013,210...8,146,769 		JBrowse link
G Atf2 activating transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:4,729,984...4,826,367
Ensembl chrNW_004936509:4,732,930...4,826,443 		JBrowse link
G Atf5 activating transcription factor 5 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,713,527...3,717,824
Ensembl chrNW_004936664:3,713,527...3,717,824 		JBrowse link
G Atrx ATRX chromatin remodeler enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936683:2,496,307...2,718,539
Ensembl chrNW_004936683:2,495,959...2,718,620 		JBrowse link
G Atxn1 ataxin 1 enables ISO (PMID:20628574) MGI PMID:20628574 NCBI chrNW_004936552:2,498,711...2,521,225
Ensembl chrNW_004936552:2,505,238...2,521,231 		JBrowse link
G Atxn7 ataxin 7 enables ISO (PMID:14613968) MGI PMID:14613968 NCBI chrNW_004936637:2,422,260...2,508,681
Ensembl chrNW_004936637:2,426,498...2,508,686 		JBrowse link
G Auts2 activator of transcription and developmental regulator AUTS2 enables ISO (PMID:25519132) MGI PMID:25519132 NCBI chrNW_004936543:5,146,961...6,187,634 JBrowse link
G Bahcc1 BAH domain and coiled-coil containing 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936594:5,083,530...5,137,749
Ensembl chrNW_004936594:5,083,538...5,136,402 		JBrowse link
G Bahd1 bromo adjacent homology domain containing 1 enables IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:3,902,558...3,927,746
Ensembl chrNW_004936471:3,902,625...3,927,829 		JBrowse link
G Bap1 BRCA1 associated protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,239,009...3,247,806
Ensembl chrNW_004936473:3,239,010...3,247,806 		JBrowse link
G Barx2 BARX homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936572:2,846,862...2,916,842
Ensembl chrNW_004936572:2,846,551...2,916,842 		JBrowse link
G Bcas3 BCAS3 microtubule associated cell migration factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:2,189,693...2,761,989
Ensembl chrNW_004936490:2,189,583...2,761,331 		JBrowse link
G Bcl6 BCL6 transcription repressor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:2,371,976...2,395,034
Ensembl chrNW_004936578:2,371,945...2,395,071 		JBrowse link
G Bend6 BEN domain containing 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:4,278,306...4,344,085
Ensembl chrNW_004936476:4,279,491...4,317,431 		JBrowse link
G Bhlhe22 basic helix-loop-helix family member e22 enables ISO (PMID:22284184) MGI PMID:22284184 NCBI chrNW_004936496:9,085,894...9,087,623 JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:5,707,542...5,716,966
Ensembl chrNW_004936520:5,707,778...5,717,024 		JBrowse link
G Brca1 BRCA1 DNA repair associated ISO RGD PMID:15574597 RGD:9586065 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Brd2 bromodomain containing 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,807,179...25,818,914
Ensembl chrNW_004936476:25,807,163...25,818,899 		JBrowse link
G Brd3 bromodomain containing 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:2,993,284...3,023,185
Ensembl chrNW_004936669:2,993,187...3,021,200 		JBrowse link
G Brd4 bromodomain containing 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:5,176,682...5,246,102
Ensembl chrNW_004936596:5,177,147...5,246,518 		JBrowse link
G Brip1 BRCA1 interacting helicase 1 ISO RGD PMID:22212472 RGD:11252153 NCBI chrNW_004936490:3,001,445...3,139,538
Ensembl chrNW_004936490:3,003,484...3,137,479 		JBrowse link
G Calcoco1 calcium binding and coiled-coil domain 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:10,947,826...10,964,372
Ensembl chrNW_004936512:10,947,681...10,964,431 		JBrowse link
G Camta2 calmodulin binding transcription activator 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,732,223...2,747,408
Ensembl chrNW_004936677:2,730,874...2,747,406 		JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 enables ISO (PMID:19799863) MGI PMID:19799863 NCBI chrNW_004936641:857,483...875,527
Ensembl chrNW_004936641:810,074...875,534 		JBrowse link
G Cbx1 chromobox 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:13,242,949...13,261,195
Ensembl chrNW_004936490:13,242,949...13,261,195 		JBrowse link
G Cbx2 chromobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:3,886,926...3,902,459
Ensembl chrNW_004936594:3,893,772...3,900,000 		JBrowse link
G Cbx3 chromobox 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936478:2,981,218...2,989,329
Ensembl chrNW_004936478:2,981,228...2,989,324 		JBrowse link
G Cbx4 chromobox 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:3,943,933...3,950,124
Ensembl chrNW_004936594:3,943,924...3,950,196 		JBrowse link
G Cbx5 chromobox 5 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936512:11,441,770...11,480,924
Ensembl chrNW_004936512:11,450,060...11,480,727 		JBrowse link
G Cbx6 chromobox 6 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936492:2,522,126...2,532,382
Ensembl chrNW_004936492:2,521,553...2,532,516 		JBrowse link
G Cbx7 chromobox 7 enables ISO (PMID:22056776) MGI PMID:22056776 NCBI chrNW_004936492:2,411,171...2,428,484
Ensembl chrNW_004936492:2,410,308...2,428,682 		JBrowse link
G Cbx8 chromobox 8 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:3,906,714...3,911,604
Ensembl chrNW_004936594:3,906,697...3,911,714 		JBrowse link
G Ccnt1 cyclin T1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:6,567,663...6,588,107
Ensembl chrNW_004936512:6,562,974...6,588,409 		JBrowse link
G Ccnt2 cyclin T2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:40,799,428...40,837,462
Ensembl chrNW_004936469:40,803,819...40,837,433 		JBrowse link
G Cdc45 cell division cycle 45 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936619:3,420,110...3,452,419
Ensembl chrNW_004936619:3,420,191...3,452,436 		JBrowse link
G Cdc6 cell division cycle 6 enables ISO (PMID:14667810) MGI PMID:14667810 NCBI chrNW_004936490:15,360,477...15,370,519
Ensembl chrNW_004936490:15,360,504...15,370,008 		JBrowse link
G Cdk1 cyclin dependent kinase 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936614:2,300,682...2,313,611
Ensembl chrNW_004936614:2,300,513...2,313,624 		JBrowse link
G Cdk9 cyclin dependent kinase 9 enables ISO
IEA		 RGD
Ensembl		 PMID:20081228 GO_REF:0000107 RGD:9698419 NCBI chrNW_004936487:15,446,864...15,450,750
Ensembl chrNW_004936487:15,446,858...15,452,796 		JBrowse link
G Cdt1 chromatin licensing and DNA replication factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:916,695...925,411
Ensembl chrNW_004936641:917,435...920,981 		JBrowse link
G Cdyl chromodomain Y like enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:7,525,618...7,601,184
Ensembl chrNW_004936534:7,525,612...7,594,813 		JBrowse link
G Cebpa CCAAT enhancer binding protein alpha enables ISO (PMID:22780989) MGI PMID:22780989 NCBI chrNW_004936570:2,513,561...2,516,213 JBrowse link
G Cenpb centromere protein B enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936485:14,914,644...14,917,265
Ensembl chrNW_004936485:14,914,644...14,916,458 		JBrowse link
G Cgas cyclic GMP-AMP synthase enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936859:797,469...807,036 JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936523:4,945,650...5,016,209
Ensembl chrNW_004936523:4,945,650...5,018,145 		JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936483:9,803,887...9,931,132
Ensembl chrNW_004936483:9,803,623...9,931,272 		JBrowse link
G Chd3 chromodomain helicase DNA binding protein 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936595:1,131,198...1,154,615
Ensembl chrNW_004936595:1,130,078...1,157,822 		JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936709:1,183,243...1,214,144
Ensembl chrNW_004936709:1,183,254...1,214,149 		JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 enables ISO
IEA		 RGD
TreeGrafter		 PMID:21931736 GO_REF:0000118 RGD:8553453 NCBI chrNW_004936623:988,423...1,046,969
Ensembl chrNW_004936623:991,193...1,046,969 		JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936880:546,250...608,061
Ensembl chrNW_004936880:546,236...608,080 		JBrowse link
G Cic capicua transcriptional repressor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:216,394...243,361
Ensembl chrNW_004936706:212,833...242,756 		JBrowse link
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:1,387,354...1,392,955
Ensembl chrNW_004936762:1,387,346...1,391,967 		JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735 		JBrowse link
G Cks2 CDC28 protein kinase regulatory subunit 2 enables ISO (PMID:18625720) MGI PMID:18625720 NCBI chrNW_004936780:257,302...262,654
Ensembl chrNW_004936780:257,410...262,654 		JBrowse link
G Coq7 coenzyme Q7, hydroxylase enables ISO (PMID:25961505) WB PMID:25961505 NCBI chrNW_004936501:5,035,986...5,043,864
Ensembl chrNW_004936501:5,034,224...5,043,909 		JBrowse link
G Cramp1 cramped chromatin regulator homolog 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936694:2,284,315...2,341,033
Ensembl chrNW_004936694:2,287,663...2,341,030 		JBrowse link
G Creb3 cAMP responsive element binding protein 3 enables ISO (PMID:16940180) UniProt PMID:16940180 NCBI chrNW_004936524:3,727,104...3,730,962
Ensembl chrNW_004936524:3,727,098...3,730,975 		JBrowse link
G Creb3l1 cAMP responsive element binding protein 3 like 1 enables ISO (PMID:19767743) MGI PMID:19767743 NCBI chrNW_004936562:2,739,908...2,772,484
Ensembl chrNW_004936562:2,739,905...2,772,484 		JBrowse link
G Crebbp CREB binding protein enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:552,447...663,237
Ensembl chrNW_004936694:553,753...663,617 		JBrowse link
G Crtc2 CREB regulated transcription coactivator 2 ISO RGD PMID:21826657 RGD:9685171 NCBI chrNW_004936580:3,693,429...3,704,104
Ensembl chrNW_004936580:3,693,430...3,704,104 		JBrowse link
G Csnk2b casein kinase 2 beta enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,857,596...1,862,551
Ensembl chrNW_004936727:1,857,596...1,862,002 		JBrowse link
G Ctbp1 C-terminal binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:22,032,712...22,055,160
Ensembl chrNW_004936477:22,032,664...22,055,187 		JBrowse link
G Ctbp2 C-terminal binding protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:13,173,280...13,261,257
Ensembl chrNW_004936486:13,173,301...13,261,259 		JBrowse link
G Ctcf CCCTC-binding factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:17,987,137...18,031,733
Ensembl chrNW_004936475:17,987,156...18,031,760 		JBrowse link
G Ctnnb1 catenin beta 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293 		JBrowse link
G Cux1 cut like homeobox 1 enables ISO (PMID:15994318) MGI PMID:15994318 NCBI chrNW_004936543:1,482,606...1,781,294
Ensembl chrNW_004936543:1,485,970...1,796,070 		JBrowse link
G Ddx1 DEAD-box helicase 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:14,884,532...14,918,621
Ensembl chrNW_004936493:14,884,442...14,918,823 		JBrowse link
G Ddx11 DEAD/H-box helicase 11 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:181,457...209,286
Ensembl chrNW_004936606:186,223...208,499 		JBrowse link
G Dhx30 DExH-box helicase 30 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:1,419,165...1,454,797
Ensembl chrNW_004936596:1,421,094...1,455,356 		JBrowse link
G Dlx1 distal-less homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:2,248,181...2,250,991
Ensembl chrNW_004936509:2,248,181...2,250,991 		JBrowse link
G Dlx2 distal-less homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:2,262,873...2,265,391
Ensembl chrNW_004936509:2,262,873...2,265,391 		JBrowse link
G Dlx3 distal-less homeobox 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:11,625,862...11,630,035
Ensembl chrNW_004936490:11,625,862...11,631,131 		JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:3,944,941...4,049,132
Ensembl chrNW_004936503:3,944,933...4,049,132 		JBrowse link
G Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:20,168,991...20,198,440
Ensembl chrNW_004936479:20,169,016...20,198,411 		JBrowse link
G Dnmt1 DNA methyltransferase 1 enables IEA Ensembl
InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936659:520,181...565,496
Ensembl chrNW_004936659:520,493...565,416 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha enables ISO (PMID:16322236) RGD
MGI		 PMID:16322236 PMID:23671328 RGD:9590112 NCBI chrNW_004936493:6,963,406...7,013,256
Ensembl chrNW_004936493:6,935,386...7,007,610 		JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO RGD PMID:23671328 RGD:9590112 NCBI chrNW_004936485:19,547,836...19,570,716 JBrowse link
G Dppa4 developmental pluripotency associated 4 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936645:2,888,131...2,903,396
Ensembl chrNW_004936645:2,888,259...2,895,735 		JBrowse link
G E2f4 E2F transcription factor 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:17,663,887...17,670,312
Ensembl chrNW_004936475:17,663,914...17,670,302 		JBrowse link
G Ebf2 EBF transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936757:779,529...954,409
Ensembl chrNW_004936757:780,041...954,021 		JBrowse link
G Ecsit ECSIT signaling integrator enables ISO (PMID:14633973) MGI PMID:14633973 NCBI chrNW_004936659:1,550,192...1,563,534
Ensembl chrNW_004936659:1,549,581...1,563,574 		JBrowse link
G Eed embryonic ectoderm development enables ISO (PMID:16687444), (PMID:24105743) RGD
MGI		 PMID:16687444 PMID:23354331 PMID:24105743 RGD:9588305 NCBI chrNW_004936498:14,050,731...14,082,410
Ensembl chrNW_004936498:14,051,045...14,083,570 		JBrowse link
G Egfr epidermal growth factor receptor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528 		JBrowse link
G Egr2 early growth response 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936753:1,958,250...1,962,640
Ensembl chrNW_004936753:1,958,264...1,962,640 		JBrowse link
G Elk1 ETS transcription factor ELK1 ISO RGD PMID:18768922 RGD:7488907 NCBI chrNW_004936502:13,402,726...13,418,214
Ensembl chrNW_004936502:13,402,728...13,418,214 		JBrowse link
G Elk4 ETS transcription factor ELK4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:6,805,305...6,814,702
Ensembl chrNW_004936557:6,757,223...6,815,712 		JBrowse link
G Eny2 ENY2 transcription and export complex 2 subunit enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:35,634,650...35,649,683
Ensembl chrNW_004936470:35,639,024...35,649,725 		JBrowse link
G Eomes eomesodermin enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:18,825,969...18,833,179
Ensembl chrNW_004936473:18,825,942...18,833,179 		JBrowse link
G Ep300 E1A binding protein p300 enables ISO
IEA		 RGD
Ensembl		 PMID:23652932 GO_REF:0000107 RGD:7327140 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138 		JBrowse link
G Ep400 E1A binding protein p400 enables ISO
IEA		 RGD
TreeGrafter		 PMID:12776177 GO_REF:0000118 RGD:1302285 NCBI chrNW_004936660:2,212,063...2,297,730
Ensembl chrNW_004936660:2,212,243...2,295,862 		JBrowse link
G Epop elongin BC and polycomb repressive complex 2 associated protein enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:14,086,278...14,088,746
Ensembl chrNW_004936490:14,087,171...14,088,310 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936728:706,499...843,447
Ensembl chrNW_004936728:761,804...844,690 		JBrowse link
G Erg ETS transcription factor ERG enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:4,459,298...4,623,290
Ensembl chrNW_004936500:4,459,275...4,624,432 		JBrowse link
G Esr1 estrogen receptor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:4,616,839...4,887,179
Ensembl chrNW_004936489:4,614,754...4,887,171 		JBrowse link
G Exo1 exonuclease 1 enables ISO (PMID:14716311) MGI PMID:14716311 NCBI chrNW_004936526:8,570,488...8,627,004 JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 enables ISO (PMID:19008232) MGI PMID:19008232 NCBI chrNW_004936474:12,191,391...12,295,380
Ensembl chrNW_004936474:12,191,389...12,295,458 		JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit enables ISO
IEA		 RGD
TreeGrafter		 PMID:23932971 GO_REF:0000118 RGD:9587811 NCBI chrNW_004936490:17,430,383...17,465,889
Ensembl chrNW_004936490:17,428,677...17,465,877 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:23932971 GO_REF:0000107 GO_REF:0000118 RGD:9587811 NCBI chrNW_004936527:5,024,077...5,069,152
Ensembl chrNW_004936527:5,024,068...5,063,939 		JBrowse link
G Faap24 FA core complex associated protein 24 enables ISO (PMID:20347429) UniProt PMID:20347429 NCBI chrNW_004936570:2,834,059...2,834,436 JBrowse link
G Fabp1 fatty acid binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:738,361...743,073
Ensembl chrNW_004936712:738,348...743,955 		JBrowse link
G Fancm FA complementation group M enables ISO (PMID:20347429) UniProt PMID:20347429 NCBI chrNW_004936583:4,085,802...4,145,621 JBrowse link
G Fezf2 FEZ family zinc finger 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936637:4,045,224...4,051,058
Ensembl chrNW_004936637:4,047,119...4,052,741 		JBrowse link
G Fli1 Fli-1 proto-oncogene, ETS transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936572:3,448,870...3,576,406
Ensembl chrNW_004936572:3,448,862...3,577,836 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 enables ISO (MGI:5602914|PMID:24813610) UniProt PMID:24813610 MGI:5602914 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,384,710...4,388,118
Ensembl chrNW_004936488:4,384,705...4,388,122 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:4,308,683...4,327,102
Ensembl chrNW_004936493:4,304,395...4,327,179 		JBrowse link
G Foxa1 forkhead box A1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:11,529,546...11,535,224
Ensembl chrNW_004936494:11,529,546...11,535,224 		JBrowse link
G Foxa2 forkhead box A2 enables ISO (PMID:22780989) MGI PMID:22780989 NCBI chrNW_004936620:2,966,341...2,969,349
Ensembl chrNW_004936620:2,966,341...2,969,349 		JBrowse link
G Foxn4 forkhead box N4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936769:1,061,907...1,081,350
Ensembl chrNW_004936769:1,062,061...1,080,444 		JBrowse link
G Foxo1 forkhead box O1 enables ISS (PMID:22510882) UniProt PMID:22510882 NCBI chrNW_004936565:5,210,014...5,299,213
Ensembl chrNW_004936565:5,210,014...5,302,436 		JBrowse link
G Foxp1 forkhead box P1 enables ISO (PMID:18347093) MGI PMID:18347093 NCBI chrNW_004936603:2,631,781...3,146,104
Ensembl chrNW_004936603:2,632,274...2,830,324 		JBrowse link
G Fus FUS RNA binding protein enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:13,529,732...13,541,102
Ensembl chrNW_004936501:13,529,803...13,540,764 		JBrowse link
G Gabpa GA binding protein transcription factor subunit alpha enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936640:1,882,297...1,917,210
Ensembl chrNW_004936640:1,882,238...1,914,232 		JBrowse link
G Gata1 GATA binding protein 1 enables ISO
IEA		 RGD
Ensembl		 PMID:22885997 GO_REF:0000107 RGD:6892958 NCBI chrNW_004936721:742,862...750,843
Ensembl chrNW_004936721:742,862...750,768 		JBrowse link
G Gata2 GATA binding protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:406,258...414,785
Ensembl chrNW_004936798:406,258...414,931 		JBrowse link
G Gata4 GATA binding protein 4 enables ISO (PMID:21379568) MGI PMID:21379568 NCBI chrNW_004936675:3,408,549...3,420,828 JBrowse link
G Gata6 GATA binding protein 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:1,814,336...1,844,399
Ensembl chrNW_004936550:1,814,336...1,844,399 		JBrowse link
G Gli1 GLI family zinc finger 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:1,622,308...1,629,787
Ensembl chrNW_004936646:1,622,308...1,629,779 		JBrowse link
G Gli2 GLI family zinc finger 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213 		JBrowse link
G Gli3 GLI family zinc finger 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:17,129,922...17,403,630
Ensembl chrNW_004936478:17,126,911...17,403,011 		JBrowse link
G Glyr1 glyoxylate reductase 1 homolog enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:4,761,838...4,794,191
Ensembl chrNW_004936530:4,761,823...4,794,729 		JBrowse link
G Gmnn geminin DNA replication inhibitor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:1,017,621...1,027,224
Ensembl chrNW_004936671:1,018,124...1,026,968 		JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936754:1,288,891...1,293,555
Ensembl chrNW_004936754:1,288,912...1,293,427 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:41,856,683...41,961,666
Ensembl chrNW_004936470:41,859,035...42,002,844 		JBrowse link
G Grwd1 glutamate rich WD repeat containing 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:2,548,178...2,555,234
Ensembl chrNW_004936664:2,547,789...2,555,887 		JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 ISO RGD PMID:17242204 RGD:9681447 NCBI chrNW_004936528:903,429...940,308
Ensembl chrNW_004936528:903,322...940,313 		JBrowse link
G Hcfc1 host cell factor C1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:827,008...853,689
Ensembl chrNW_004936809:827,031...853,644 		JBrowse link
G Hdac1 histone deacetylase 1 enables ISO
IEA		 RGD
Ensembl		 PMID:23671328 GO_REF:0000107 RGD:9590112 NCBI chrNW_004936474:15,320,635...15,351,418
Ensembl chrNW_004936474:15,320,729...15,350,860 		JBrowse link
G Hdac2 histone deacetylase 2 enables ISO (MGI:3811960|PMID:18754010), (PMID:17392792) UniProt PMID:17392792 PMID:18754010 MGI:3811960 NCBI chrNW_004936679:2,448,676...2,474,641
Ensembl chrNW_004936679:2,448,390...2,474,641 		JBrowse link
G Hdac3 histone deacetylase 3 enables ISO
IEA		 RGD
Ensembl		 PMID:22679019 GO_REF:0000107 RGD:9590167 NCBI chrNW_004936504:12,530,546...12,546,556
Ensembl chrNW_004936504:12,530,528...12,546,556 		JBrowse link
G Hdac4 histone deacetylase 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936745:1,730,743...1,942,071
Ensembl chrNW_004936745:1,730,694...1,942,074 		JBrowse link
G Hdac5 histone deacetylase 5 ISO RGD PMID:19638401 RGD:9590153 NCBI chrNW_004936541:561,721...598,915
Ensembl chrNW_004936541:558,414...599,195 		JBrowse link
G Hdac7 histone deacetylase 7 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:5,680,564...5,701,182
Ensembl chrNW_004936512:5,682,490...5,697,869 		JBrowse link
G Hdac8 histone deacetylase 8 ISO RGD PMID:28559304 RGD:13208603 NCBI chrNW_004936762:1,425,337...1,652,058
Ensembl chrNW_004936762:1,425,335...1,652,063 		JBrowse link
G Hells helicase, lymphoid specific enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936601:626,354...662,477
Ensembl chrNW_004936601:626,823...662,465 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO RGD PMID:15607978 RGD:9685371 NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 enables ISO PMID:17006542 MGI PMID:17006542 RGD:8554845 NCBI chrNW_004936737:1,045,496...1,047,865
Ensembl chrNW_004936737:1,046,613...1,047,950 		JBrowse link
G Hesx1 HESX homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:7,545,982...7,572,222
Ensembl chrNW_004936473:7,545,839...7,548,013 		JBrowse link
G Hhex hematopoietically expressed homeobox enables ISO (PMID:16764824) MGI PMID:16764824 NCBI chrNW_004936601:2,137,490...2,143,797
Ensembl chrNW_004936601:2,136,873...2,143,857 		JBrowse link
G Hinfp histone H4 transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,072,771...4,083,973
Ensembl chrNW_004936542:4,072,624...4,084,064 		JBrowse link
G Hmga1 high mobility group AT-hook 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:24,795,854...24,803,138
Ensembl chrNW_004936476:24,795,877...24,801,567 		JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936500:3,845,320...3,852,000
Ensembl chrNW_004936500:3,847,517...3,852,039 		JBrowse link
G Hmgn3 high mobility group nucleosomal binding domain 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936510:10,923,014...10,954,354
Ensembl chrNW_004936510:10,923,009...10,954,354 		JBrowse link
G Hmgn5 high mobility group nucleosome binding domain 5 enables ISO (PMID:10692437) MGI PMID:10692437 NCBI chrNW_004936547:2,607,491...2,614,037 JBrowse link
G Hnf1a HNF1 homeobox A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:62,103...81,549
Ensembl chrNW_004936668:67,535...81,505 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:2,401,053...2,425,989
Ensembl chrNW_004936530:2,401,043...2,454,466 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:18413351 RGD:10041067 NCBI chrNW_004936738:2,096,370...2,115,135
Ensembl chrNW_004936738:2,096,370...2,113,604 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U enables ISO (PMID:11909954), (PMID:28622508), (PMID:9405365) UniProt PMID:9405365 PMID:11909954 PMID:28622508 NCBI chrNW_004936526:6,014,745...6,022,213 JBrowse link
G Hoxc13 homeobox C13 enables ISO (PMID:21191399) MGI PMID:21191399 NCBI chrNW_004936512:11,160,343...11,166,616 JBrowse link
G Hoxd10 homeobox D10 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:5,603,661...5,606,850
Ensembl chrNW_004936509:5,603,642...5,606,850 		JBrowse link
G Hoxd13 homeobox D13 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:5,579,846...5,581,651
Ensembl chrNW_004936509:5,579,843...5,581,651 		JBrowse link
G Hsf1 heat shock transcription factor 1 enables ISO (PMID:21690297) MGI PMID:21690297 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337 		JBrowse link
G Ift74 intraflagellar transport 74 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936611:2,588,711...2,660,496
Ensembl chrNW_004936611:2,588,695...2,660,532 		JBrowse link
G Ikzf5 IKAROS family zinc finger 5 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:11,652,234...11,667,972
Ensembl chrNW_004936486:11,650,306...11,668,285 		JBrowse link
G Ing5 inhibitor of growth family member 5 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936745:261,371...271,447
Ensembl chrNW_004936745:261,450...271,943 		JBrowse link
G Isl1 ISL LIM homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:15,805,259...15,817,854
Ensembl chrNW_004936480:15,805,247...15,817,854 		JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936552:1,566,382...1,786,837
Ensembl chrNW_004936552:1,566,788...1,785,490 		JBrowse link
G Jdp2 Jun dimerization protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,523,879...4,553,028
Ensembl chrNW_004936488:4,523,888...4,553,117 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit enables ISO (PMID:20442316), (PMID:23918802) MGI PMID:20442316 PMID:23918802 NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350 		JBrowse link
G Kat2a lysine acetyltransferase 2A enables ISO
IEA		 RGD
Ensembl		 PMID:21697636 GO_REF:0000107 RGD:8693753 NCBI chrNW_004936490:16,952,698...16,960,424
Ensembl chrNW_004936490:16,952,363...16,960,489 		JBrowse link
G Kat2b lysine acetyltransferase 2B enables ISO
IEA		 RGD
Ensembl		 PMID:20870727 GO_REF:0000107 RGD:9590266 NCBI chrNW_004936473:12,341,545...12,415,637
Ensembl chrNW_004936473:12,344,343...12,417,875 		JBrowse link
G Kat5 lysine acetyltransferase 5 enables ISO
IEA		 RGD
Ensembl		 PMID:12776177 GO_REF:0000107 RGD:1302285 NCBI chrNW_004936599:3,767,526...3,775,416
Ensembl chrNW_004936599:3,766,242...3,776,128 		JBrowse link
G Kat6a lysine acetyltransferase 6A enables ISO (PMID:22921202) MGI PMID:22921202 NCBI chrNW_004936785:602,754...704,504
Ensembl chrNW_004936785:603,478...701,791 		JBrowse link
G Kdm1a lysine demethylase 1A enables ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:23221071 GO_REF:0000107 GO_REF:0000118 RGD:9588312 NCBI chrNW_004936474:8,262,913...8,319,089
Ensembl chrNW_004936474:8,262,885...8,319,092 		JBrowse link
G Kdm1b lysine demethylase 1B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936552:3,921,217...3,964,281
Ensembl chrNW_004936552:3,921,490...3,962,648 		JBrowse link
G Kdm3a lysine demethylase 3A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:1,053,210...1,097,845
Ensembl chrNW_004936712:1,053,210...1,096,961 		JBrowse link
G Kdm4c lysine demethylase 4C ISO RGD PMID:24747049 RGD:9587433 NCBI chrNW_004936539:1,198,105...1,580,078
Ensembl chrNW_004936539:1,198,147...1,580,082 		JBrowse link
G Kdm5a lysine demethylase 5A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:486,424...570,546
Ensembl chrNW_004936606:485,655...570,739 		JBrowse link
G Kdm6b lysine demethylase 6B ISO RGD PMID:23932971 RGD:9587811 NCBI chrNW_004936595:1,077,318...1,099,082
Ensembl chrNW_004936595:1,089,544...1,097,595 		JBrowse link
G Kdm8 lysine demethylase 8 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:10,932,541...10,955,772
Ensembl chrNW_004936501:10,933,671...10,951,707 		JBrowse link
G Klf14 KLF transcription factor 14 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936579:4,587,072...4,588,505
Ensembl chrNW_004936579:4,587,081...4,588,010 		JBrowse link
G Klhdc3 kelch domain containing 3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936476:16,913,494...16,920,108
Ensembl chrNW_004936476:16,913,493...16,918,524 		JBrowse link
G Kmt2a lysine methyltransferase 2A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:3,480,071...3,566,823
Ensembl chrNW_004936542:3,391,774...3,562,147 		JBrowse link
G Kmt5b lysine methyltransferase 5B enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:1,928,172...1,983,983
Ensembl chrNW_004936599:1,928,145...1,984,008 		JBrowse link
G Kmt5c lysine methyltransferase 5C enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936886:596,949...602,959
Ensembl chrNW_004936886:595,782...604,286 		JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936530:3,038,873...3,069,724
Ensembl chrNW_004936530:3,038,847...3,069,494 		JBrowse link
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936492:642,434...666,402
Ensembl chrNW_004936492:637,835...666,435 		JBrowse link
G L3mbtl3 L3MBTL histone methyl-lysine binding protein 3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936790:1,210,842...1,298,577
Ensembl chrNW_004936790:1,212,536...1,298,566 		JBrowse link
G L3mbtl4 L3MBTL histone methyl-lysine binding protein 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936779:192,852...570,881
Ensembl chrNW_004936779:234,634...454,418 		JBrowse link
G Lcor ligand dependent nuclear receptor corepressor enables ISO (PMID:17392792) MGI PMID:17392792 NCBI chrNW_004936636:2,594,777...2,720,153
Ensembl chrNW_004936636:2,595,394...2,626,824 		JBrowse link
G Ldb1 LIM domain binding 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:3,714,630...3,728,813
Ensembl chrNW_004936600:3,714,095...3,728,815 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936818:453,635...569,194
Ensembl chrNW_004936818:453,635...567,469 		JBrowse link
G Lhx2 LIM homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:12,395,817...12,413,860
Ensembl chrNW_004936487:12,395,812...12,414,003 		JBrowse link
G Lmo2 LIM domain only 2 enables ISO (PMID:18184866), (PMID:19011221) MGI PMID:18184866 PMID:19011221 NCBI chrNW_004936533:4,107,073...4,117,121
Ensembl chrNW_004936533:4,107,067...4,117,222 		JBrowse link
G LOC101954503 protein SET-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936484:10,350,214...10,350,963 JBrowse link
G LOC101954516 signal transducer and activator of transcription 5B enables ISO PMID:20639532 UniProt PMID:20639532 RGD:8553583 NCBI chrNW_004936490:17,022,268...17,043,751
Ensembl chrNW_004936490:17,021,051...17,043,941 		JBrowse link
G LOC101955795 non-histone chromosomal protein HMG-17-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936566:2,434,081...2,434,350 JBrowse link
G LOC101956023 uncharacterized LOC101956023 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:10,951,065...10,952,654
Ensembl chrNW_004936474:10,951,040...10,952,622 		JBrowse link
G LOC101956464 non-histone chromosomal protein HMG-17 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936542:8,395,521...8,395,897 JBrowse link
G LOC101956825 non-histone chromosomal protein HMG-17 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936487:9,155,533...9,156,763 JBrowse link
G LOC101958065 zinc finger protein 91 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936739:1,778,016...1,836,177
Ensembl chrNW_004936739:1,821,721...1,835,192 		JBrowse link
G LOC101958619 non-histone chromosomal protein HMG-17-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:36,589,205...36,589,581 JBrowse link
G LOC101959362 peroxisomal membrane protein PEX14 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936623:4,313,186...4,462,462
Ensembl chrNW_004936623:4,313,147...4,462,528
Ensembl chrNW_004936623:4,313,147...4,462,528 		JBrowse link
G LOC101959491 putative testis-specific Y-encoded-like protein 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:19,092,531...19,095,884 JBrowse link
G LOC101960284 nucleophosmin-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936505:7,718,742...7,719,787 JBrowse link
G LOC101960714 cone-rod homeobox protein enables ISO (PMID:14613968) MGI PMID:14613968 NCBI chrNW_004936664:1,408,618...1,419,096
Ensembl chrNW_004936664:1,409,229...1,419,234 		JBrowse link
G LOC101960907 uncharacterized LOC101960907 enables ISO (PMID:22780989) MGI PMID:22780989 NCBI chrNW_004936471:14,532,888...14,581,258
Ensembl chrNW_004936471:14,532,892...14,566,904 		JBrowse link
G LOC101964352 protein SET-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936750:275,064...275,937 JBrowse link
G LOC101965662 non-histone chromosomal protein HMG-17-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936626:2,238,897...2,240,015 JBrowse link
G LOC101966029 non-histone chromosomal protein HMG-17-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936523:2,611,759...2,612,147 JBrowse link
G LOC101966642 non-histone chromosomal protein HMG-17-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936622:837,413...838,563 JBrowse link
G LOC101970824 histone PARylation factor 1 enables ISO (PMID:32939087) UniProt PMID:32939087 NCBI chrNW_004936516:1,763,935...1,785,538 JBrowse link
G LOC101971629 core histone macro-H2A.1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:2,496,489...2,556,352
Ensembl chrNW_004936597:2,495,862...2,556,603 		JBrowse link
G LOC101974652 PWWP domain-containing protein 2A-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004938008:6...1,284 JBrowse link
G LOC101976824 nuclear factor of activated T cells 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:3,453,475...3,579,292
Ensembl chrNW_004936514:3,467,178...3,578,882 		JBrowse link
G Lrwd1 leucine rich repeats and WD repeat domain containing 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936543:1,889,072...1,895,643
Ensembl chrNW_004936543:1,888,768...1,896,966 		JBrowse link
G Mapk15 mitogen-activated protein kinase 15 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,420,850...8,425,996
Ensembl chrNW_004936470:8,420,732...8,425,884 		JBrowse link
G Maz MYC associated zinc finger protein enables ISO (PMID:18710939), (PMID:19268698) MGI PMID:18710939 PMID:19268698 NCBI chrNW_004936501:12,664,861...12,668,819 JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 ISO RGD PMID:18689796 RGD:9588634 NCBI chrNW_004936497:12,848,918...12,868,504
Ensembl chrNW_004936497:12,848,874...12,871,639 		JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 enables ISO
IEA		 RGD
Ensembl		 PMID:25135974 GO_REF:0000107 RGD:9589119 NCBI chrNW_004936497:9,512,350...9,619,250
Ensembl chrNW_004936497:9,545,907...9,619,267 		JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 enables ISO (PMID:16322236) MGI PMID:16322236 NCBI chrNW_004936588:865,046...873,821
Ensembl chrNW_004936588:864,867...874,923 		JBrowse link
G Mbd5 methyl-CpG binding domain protein 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936469:28,748,499...28,889,679
Ensembl chrNW_004936469:28,744,814...28,802,776 		JBrowse link
G Mbd6 methyl-CpG binding domain protein 6 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936646:1,669,281...1,678,512 JBrowse link
G Mbtd1 mbt domain containing 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:10,567,146...10,633,130
Ensembl chrNW_004936490:10,587,010...10,630,049 		JBrowse link
G Mcm3ap minichromosome maintenance complex component 3 associated protein enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936778:273,152...318,157
Ensembl chrNW_004936778:273,909...319,232 		JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:13,072,791...13,108,392
Ensembl chrNW_004936485:13,072,600...13,108,411 		JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor enables ISO (PMID:23401855), (PMID:26300262)
(MGI:5525985|PMID:23401855)		 UniProt PMID:23401855 PMID:26300262 MGI:5525985 NCBI chrNW_004936658:1,657,226...1,734,150 JBrowse link
G Mcmbp minichromosome maintenance complex binding protein enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936486:9,184,865...9,212,883
Ensembl chrNW_004936486:9,185,469...9,212,838 		JBrowse link
G Mecp2 methyl-CpG binding protein 2 enables ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:23688924 GO_REF:0000107 GO_REF:0000118 RGD:9589062 NCBI chrNW_004936809:902,938...967,771
Ensembl chrNW_004936809:911,764...966,839 		JBrowse link
G Med1 mediator complex subunit 1 enables ISO
IEA		 RGD
Ensembl		 PMID:20378540 GO_REF:0000107 RGD:9681556 NCBI chrNW_004936490:14,625,201...14,663,184
Ensembl chrNW_004936490:14,625,897...14,657,802 		JBrowse link
G Med12 mediator complex subunit 12 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:460,342...483,264
Ensembl chrNW_004936762:460,342...483,195 		JBrowse link
G Mef2a myocyte enhancer factor 2A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:3,837,891...3,982,334
Ensembl chrNW_004936483:3,834,700...3,919,766 		JBrowse link
G Mef2c myocyte enhancer factor 2C enables ISO (PMID:18086704) MGI PMID:18086704 NCBI chrNW_004936469:7,060,480...7,225,497
Ensembl chrNW_004936469:7,060,480...7,204,661 		JBrowse link
G Meiob meiosis specific with OB-fold enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:2,099,967...2,176,279
Ensembl chrNW_004936694:2,142,800...2,176,239 		JBrowse link
G Meis1 Meis homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:11,079,574...11,216,451
Ensembl chrNW_004936491:11,079,455...11,217,388 		JBrowse link
G Meis3 Meis homeobox 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:1,095,815...1,105,751
Ensembl chrNW_004936664:1,095,772...1,105,808 		JBrowse link
G Men1 menin 1 enables ISO
IEA		 RGD
TreeGrafter		 PMID:24157940 GO_REF:0000118 RGD:9589069 NCBI chrNW_004936599:4,504,489...4,510,085
Ensembl chrNW_004936599:4,504,397...4,510,555 		JBrowse link
G Meox1 mesenchyme homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:216,390...238,153
Ensembl chrNW_004936541:217,193...236,031 		JBrowse link
G Mitf melanocyte inducing transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936603:1,682,411...1,858,295
Ensembl chrNW_004936603:1,682,513...1,858,173 		JBrowse link
G Mkrn1 makorin ring finger protein 1 enables ISO (PMID:15522233) MGI PMID:15522233 NCBI chrNW_004936592:4,533,142...4,539,599 JBrowse link
G Mlh1 mutL homolog 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:26,556,636...26,600,830
Ensembl chrNW_004936473:26,556,611...26,603,736 		JBrowse link
G Mlh3 mutL homolog 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,164,322...4,195,408
Ensembl chrNW_004936488:4,164,918...4,195,517 		JBrowse link
G Mllt1 MLLT1 super elongation complex subunit enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936588:3,619,480...3,678,532
Ensembl chrNW_004936588:3,619,493...3,669,854 		JBrowse link
G Mllt10 MLLT10 histone lysine methyltransferase DOT1L cofactor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:6,176,784...6,366,436
Ensembl chrNW_004936520:6,176,599...6,366,428 		JBrowse link
G Mllt3 MLLT3 super elongation complex subunit enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936652:2,040,685...2,309,059
Ensembl chrNW_004936652:2,044,874...2,308,832 		JBrowse link
G Mnt MAX network transcriptional repressor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:8,439,548...8,456,021
Ensembl chrNW_004936538:8,439,363...8,456,159 		JBrowse link
G Morc2 MORC family CW-type zinc finger 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936755:133,315...171,507
Ensembl chrNW_004936755:130,983...171,492 		JBrowse link
G Morf4l1 mortality factor 4 like 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:37,073,920...37,097,216
Ensembl chrNW_004936471:37,073,895...37,097,235 		JBrowse link
G Mphosph8 M-phase phosphoprotein 8 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936720:1,972,063...2,025,283
Ensembl chrNW_004936720:1,972,119...2,025,332 		JBrowse link
G Mrnip MRN complex interacting protein enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936739:926,678...955,024 JBrowse link
G Msgn1 mesogenin 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:13,129,883...13,130,464
Ensembl chrNW_004936493:13,129,883...13,130,464 		JBrowse link
G Msh2 mutS homolog 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356 		JBrowse link
G Msh6 mutS homolog 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:4,708,661...4,728,671
Ensembl chrNW_004936508:4,708,661...4,728,787 		JBrowse link
G Msl1 MSL complex subunit 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:15,236,087...15,249,661
Ensembl chrNW_004936490:15,236,081...15,249,926 		JBrowse link
G Mta1 metastasis associated 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936621:117,785...140,917
Ensembl chrNW_004936621:117,785...140,926 		JBrowse link
G Mta2 metastasis associated 1 family member 2 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936581:654,927...662,805
Ensembl chrNW_004936581:654,830...662,779 		JBrowse link
G Mta3 metastasis associated 1 family member 3 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936508:8,989,695...9,132,694
Ensembl chrNW_004936508:8,989,681...9,132,722 		JBrowse link
G Mtf2 metal response element binding transcription factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936537:6,071,435...6,134,144
Ensembl chrNW_004936537:6,071,153...6,134,144 		JBrowse link
G Myod1 myogenic differentiation 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:1,407,187...1,409,683
Ensembl chrNW_004936528:1,407,661...1,409,573 		JBrowse link
G Nanog Nanog homeobox enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936892:181,834...187,691 JBrowse link
G Nap1l1 nucleosome assembly protein 1 like 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936568:4,416,225...4,440,566
Ensembl chrNW_004936568:4,419,652...4,440,608 		JBrowse link
G Nap1l2 nucleosome assembly protein 1 like 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936683:125,645...128,213
Ensembl chrNW_004936683:126,425...127,801 		JBrowse link
G Nap1l3 nucleosome assembly protein 1 like 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936649:274,677...277,545
Ensembl chrNW_004936649:275,068...276,681 		JBrowse link
G Nap1l4 nucleosome assembly protein 1 like 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936794:1,074,126...1,106,613
Ensembl chrNW_004936794:1,074,128...1,106,519 		JBrowse link
G Nap1l5 nucleosome assembly protein 1 like 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936685:1,142,051...1,143,536
Ensembl chrNW_004936685:1,142,826...1,143,401 		JBrowse link
G Ncaph non-SMC condensin I complex subunit H enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936744:440,958...468,964
Ensembl chrNW_004936744:440,956...468,972 		JBrowse link
G Ncaph2 non-SMC condensin II complex subunit H2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936629:320,885...327,290
Ensembl chrNW_004936629:321,011...327,607 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:7,368,393...7,605,754
Ensembl chrNW_004936493:7,368,462...7,465,615 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:14,844,923...15,102,922
Ensembl chrNW_004936496:14,844,855...15,016,454 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 enables ISO (PMID:16109736) MGI PMID:16109736 NCBI chrNW_004936514:5,900,135...5,967,862
Ensembl chrNW_004936514:5,901,601...5,967,865 		JBrowse link
G Ncoa5 nuclear receptor coactivator 5 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:6,964,397...6,996,997
Ensembl chrNW_004936514:6,964,434...6,999,129 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 enables ISO (PMID:12446761) MGI PMID:12446761 NCBI chrNW_004936561:5,905,905...5,982,824
Ensembl chrNW_004936561:5,906,485...5,982,268 		JBrowse link
G Ncor1 nuclear receptor corepressor 1 enables ISO (PMID:17392792) RGD
MGI		 PMID:17392792 PMID:20352046 RGD:5688346 NCBI chrNW_004936821:382,756...538,254
Ensembl chrNW_004936821:382,383...536,223 		JBrowse link
G Ncor2 nuclear receptor corepressor 2 enables ISO (PMID:15832170), (PMID:18347093), (PMID:19066220) RGD
MGI		 PMID:15832170 PMID:15870285 PMID:18347093 PMID:19066220 PMID:20137375 More... RGD:5688286 RGD:5688307 RGD:5688346 NCBI chrNW_004936558:658,723...775,263
Ensembl chrNW_004936558:677,610...775,288 		JBrowse link
G Nelfa negative elongation factor complex member A enables ISO
IEA		 RGD
Ensembl		 PMID:21623364 GO_REF:0000107 RGD:9693718 NCBI chrNW_004936477:21,442,493...21,459,999
Ensembl chrNW_004936477:21,442,380...21,464,005 		JBrowse link
G Nelfe negative elongation factor complex member E enables ISO
IEA		 RGD
Ensembl		 PMID:20097260 PMID:21623364 GO_REF:0000107 RGD:9588536 RGD:9693718 NCBI chrNW_004936727:1,589,942...1,596,009
Ensembl chrNW_004936727:1,589,942...1,598,182 		JBrowse link
G Neurod1 neuronal differentiation 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:10,421,821...10,425,927
Ensembl chrNW_004936509:10,423,126...10,424,196 		JBrowse link
G Neurog1 neurogenin 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:2,708,001...2,709,702
Ensembl chrNW_004936597:2,708,691...2,709,425 		JBrowse link
G Nfat5 nuclear factor of activated T cells 5 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:19,658,917...19,758,936
Ensembl chrNW_004936475:19,660,201...19,758,930 		JBrowse link
G Nfatc1 nuclear factor of activated T cells 1 enables ISO (PMID:24301466) MGI PMID:24301466 NCBI chrNW_004936616:484,062...584,950
Ensembl chrNW_004936616:484,045...587,891 		JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 enables ISO (PMID:16998587), (PMID:18676376), (PMID:21514407), (PMID:24301466) MGI PMID:16998587 PMID:18676376 PMID:21514407 PMID:24301466 NCBI chrNW_004936475:18,462,424...18,557,832
Ensembl chrNW_004936475:18,462,298...18,555,220 		JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 enables ISO (PMID:25637874) MGI PMID:25637874 NCBI chrNW_004936490:13,265,269...13,279,164
Ensembl chrNW_004936490:13,266,347...13,279,206 		JBrowse link
G Nfia nuclear factor I A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:612,357...1,171,079
Ensembl chrNW_004936522:615,012...957,282 		JBrowse link
G Nfix nuclear factor I X enables ISO (PMID:23964093), (PMID:29452604)
(PMID:29452604)		 MGI PMID:23964093 PMID:29452604 NCBI chrNW_004936659:2,065,410...2,136,898
Ensembl chrNW_004936659:2,065,458...2,136,889 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:733,760...850,563
Ensembl chrNW_004936520:733,668...829,435 		JBrowse link
G Nipbl NIPBL cohesin loading factor enables IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936518:4,870,686...5,041,099
Ensembl chrNW_004936518:4,869,546...4,969,450 		JBrowse link
G Nkap NFKB activating protein enables IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936479:10,024,674...10,041,738
Ensembl chrNW_004936479:10,024,705...10,041,590 		JBrowse link
G Nkx2-5 NK2 homeobox 5 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936609:2,406,004...2,408,980
Ensembl chrNW_004936609:2,406,004...2,409,046 		JBrowse link
G Nkx6-1 NK6 homeobox 1 ISO RGD PMID:15883383 RGD:2306242 NCBI chrNW_004936738:318,020...322,869
Ensembl chrNW_004936738:317,907...324,235 		JBrowse link
G Noc2l NOC2 like nucleolar associated transcriptional repressor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:2,087,123...2,098,153
Ensembl chrNW_004936737:2,087,158...2,098,156 		JBrowse link
G Noc3l NOC3 like DNA replication regulator enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936601:782,923...811,598
Ensembl chrNW_004936601:782,901...816,185 		JBrowse link
G Nono non-POU domain containing octamer binding enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:322,413...343,126
Ensembl chrNW_004936762:321,280...341,537 		JBrowse link
G Notch1 notch receptor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428 		JBrowse link
G Npm1 nucleophosmin 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936609:3,712,628...3,725,635 JBrowse link
G Npm2 nucleophosmin/nucleoplasmin 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936555:5,850,024...5,868,049
Ensembl chrNW_004936555:5,844,854...5,868,306 		JBrowse link
G Npm3 nucleophosmin/nucleoplasmin 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936600:3,997,549...3,999,620
Ensembl chrNW_004936600:3,997,285...3,999,630 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:15808513 RGD:1581612 NCBI chrNW_004936504:10,960,069...11,056,834
Ensembl chrNW_004936504:10,959,192...11,056,856 		JBrowse link
G Nr5a1 nuclear receptor subfamily 5 group A member 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:12,739,445...12,763,729
Ensembl chrNW_004936487:12,739,439...12,763,734 		JBrowse link
G Nr5a2 nuclear receptor subfamily 5 group A member 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:4,084,161...4,194,858
Ensembl chrNW_004936567:4,084,608...4,212,854 		JBrowse link
G Nsd1 nuclear receptor binding SET domain protein 1 enables ISO (PMID:15522233) MGI PMID:15522233 NCBI chrNW_004936597:1,426,318...1,577,193
Ensembl chrNW_004936597:1,425,974...1,572,715 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:21,460,442...21,531,563
Ensembl chrNW_004936477:21,460,478...21,534,909 		JBrowse link
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:6,713,065...6,728,011
Ensembl chrNW_004936557:6,713,095...6,722,808 		JBrowse link
G Nudt21 nudix hydrolase 21 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:8,739,992...8,759,165
Ensembl chrNW_004936475:8,741,821...8,759,223 		JBrowse link
G Nup153 nucleoporin 153 ISO RGD PMID:10362555 RGD:10401210 NCBI chrNW_004936552:3,529,506...3,588,830
Ensembl chrNW_004936552:3,530,559...3,577,177 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,998,064...11,999,431
Ensembl chrNW_004936501:11,997,834...11,999,709 		JBrowse link
G Obi1 ORC ubiquitin ligase 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:2,800,466...2,847,896
Ensembl chrNW_004936511:2,800,425...2,848,628 		JBrowse link
G Onecut1 one cut homeobox 1 enables IEA Ensembl GO_REF:0000107
G Orc1 origin recognition complex subunit 1 enables ISO
IEA		 RGD
InterPro		 PMID:16982680 GO_REF:0000002 RGD:2313416 NCBI chrNW_004936522:8,580,661...8,610,750
Ensembl chrNW_004936522:8,586,591...8,610,747 		JBrowse link
G Ovol2 ovo like zinc finger 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:2,096,495...2,128,002
Ensembl chrNW_004936485:2,096,495...2,128,540 		JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936661:2,236,121...2,241,086
Ensembl chrNW_004936661:2,232,484...2,241,629 		JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase enables ISO (PMID:10601332) MGI PMID:10601332 NCBI chrNW_004936523:1,492,795...1,786,942
Ensembl chrNW_004936523:1,493,450...1,750,524 		JBrowse link
G Parg poly(ADP-ribose) glycohydrolase ISO RGD PMID:12858335 RGD:724638 NCBI chrNW_004936728:428,028...538,413
Ensembl chrNW_004936728:428,028...541,530 		JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:3,102,468...3,147,601
Ensembl chrNW_004936526:3,102,039...3,147,642 		JBrowse link
G Parp2 poly(ADP-ribose) polymerase 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936877:554,969...564,905
Ensembl chrNW_004936877:554,473...564,903 		JBrowse link
G Patz1 POZ/BTB and AT hook containing zinc finger 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936755:491,660...511,812
Ensembl chrNW_004936755:491,656...511,812 		JBrowse link
G Pax3 paired box 3 enables ISO (PMID:15729346) MGI PMID:15729346 NCBI chrNW_004936569:4,215,513...4,307,815
Ensembl chrNW_004936569:4,216,900...4,307,815 		JBrowse link
G Pax6 paired box 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936533:5,952,529...5,980,889
Ensembl chrNW_004936533:5,957,971...5,982,075 		JBrowse link
G Pbrm1 polybromo 1 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936473:3,382,618...3,476,049
Ensembl chrNW_004936473:3,382,260...3,476,052 		JBrowse link
G Pbx2 PBX homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,413,063...1,418,304
Ensembl chrNW_004936727:1,412,632...1,419,438 		JBrowse link
G Pcgf2 polycomb group ring finger 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:14,139,125...14,150,377
Ensembl chrNW_004936490:14,138,980...14,150,756 		JBrowse link
G Pclaf PCNA clamp associated factor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:24,797,291...24,812,196
Ensembl chrNW_004936471:24,797,393...24,808,227 		JBrowse link
G Pcna proliferating cell nuclear antigen enables ISO (PMID:23277426), (PMID:24939902) UniProt PMID:23277426 PMID:24939902 NCBI chrNW_004936485:13,766,221...13,771,215 JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,102,534...23,107,127
Ensembl chrNW_004936472:23,102,534...23,107,127 		JBrowse link
G Pelp1 proline, glutamate and leucine rich protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:3,184,758...3,212,026
Ensembl chrNW_004936677:3,184,357...3,213,432 		JBrowse link
G Phc1 polyhomeotic homolog 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936870:275,764...300,460
Ensembl chrNW_004936870:277,252...303,125 		JBrowse link
G Phc2 polyhomeotic homolog 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:16,147,699...16,252,073
Ensembl chrNW_004936474:16,145,496...16,236,854 		JBrowse link
G Phc3 polyhomeotic homolog 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936593:2,263,892...2,336,856
Ensembl chrNW_004936593:2,263,829...2,336,856 		JBrowse link
G Phf1 PHD finger protein 1 enables ISO
IEA		 RGD
TreeGrafter		 PMID:23879974 GO_REF:0000118 RGD:9586746 NCBI chrNW_004936476:25,481,938...25,487,026
Ensembl chrNW_004936476:25,479,953...25,487,403 		JBrowse link
G Phf13 PHD finger protein 13 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936623:1,364,422...1,372,226
Ensembl chrNW_004936623:1,366,401...1,372,222 		JBrowse link
G Phf19 PHD finger protein 19 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936487:9,310,327...9,326,650
Ensembl chrNW_004936487:9,310,790...9,326,681 		JBrowse link
G Phf21a PHD finger protein 21A enables ISO
IEA		 RGD
TreeGrafter		 PMID:19439607 GO_REF:0000118 RGD:9588528 NCBI chrNW_004936562:2,920,254...3,093,444
Ensembl chrNW_004936562:2,920,316...3,093,556 		JBrowse link
G Phf8 PHD finger protein 8 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936751:850,630...935,382
Ensembl chrNW_004936751:850,237...934,586 		JBrowse link
G Pitx2 paired like homeodomain 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936563:1,713,294...1,732,431 JBrowse link
G Pkn1 protein kinase N1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:2,990,905...3,014,553
Ensembl chrNW_004936659:2,990,937...3,014,485 		JBrowse link
G Pknox1 PBX/knotted 1 homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:1,018,414...1,055,221
Ensembl chrNW_004936500:1,015,954...1,055,215 		JBrowse link
G Plac8 placenta associated 8 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936738:1,484,905...1,503,181
Ensembl chrNW_004936738:1,484,859...1,503,302 		JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936836:1,151...287,438 JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936889:231,373...250,985
Ensembl chrNW_004936889:231,373...250,987
Ensembl chrNW_004936889:231,373...250,987 		JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936660:2,575,255...2,622,867
Ensembl chrNW_004936660:2,575,360...2,622,852 		JBrowse link
G Polg DNA polymerase gamma, catalytic subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:15,178,947...15,196,277
Ensembl chrNW_004936483:15,179,342...15,195,258 		JBrowse link
G Polq DNA polymerase theta enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936536:7,904,166...8,004,305
Ensembl chrNW_004936536:7,904,981...8,004,199 		JBrowse link
G Polr1a RNA polymerase I subunit A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:1,331,016...1,390,544
Ensembl chrNW_004936712:1,331,073...1,389,856 		JBrowse link
G Polr2b RNA polymerase II subunit B enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:19,073,125...19,119,424
Ensembl chrNW_004936482:19,073,124...19,119,421 		JBrowse link
G Polr3a RNA polymerase III subunit A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:1,570,863...1,613,410
Ensembl chrNW_004936521:1,570,857...1,614,409 		JBrowse link
G Polr3d RNA polymerase III subunit D enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,051,528...6,057,165
Ensembl chrNW_004936555:6,051,476...6,057,164 		JBrowse link
G Polr3g RNA polymerase III subunit G enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:8,574,120...8,611,643 JBrowse link
G Polr3gl RNA polymerase III subunit GL enables ISO (PMID:24107381) MGI PMID:24107381 NCBI chrNW_004936867:698,932...711,170
Ensembl chrNW_004936867:698,932...711,144 		JBrowse link
G Pou1f1 POU class 1 homeobox 1 enables ISO (PMID:16678101), (PMID:17015435), (PMID:17392792) MGI PMID:16678101 PMID:17015435 PMID:17392792 NCBI chrNW_004936610:2,262,715...2,279,098
Ensembl chrNW_004936610:2,262,715...2,279,098 		JBrowse link
G Pou2f1 POU class 2 homeobox 1 enables ISO (PMID:16735694) RGD
MGI		 PMID:16735694 PMID:17481938 RGD:9743917 NCBI chrNW_004936481:18,607,212...18,679,828
Ensembl chrNW_004936481:18,617,572...18,678,183 		JBrowse link
G Pou4f1 POU class 4 homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:2,857,017...2,859,705
Ensembl chrNW_004936511:2,857,331...2,859,277 		JBrowse link
G Pou4f2 POU class 4 homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:2,705,184...2,711,785
Ensembl chrNW_004936535:2,705,162...2,711,813 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 enables ISO (PMID:15988017), (PMID:18467660), (PMID:21295276) MGI PMID:15988017 PMID:18467660 PMID:21295276 NCBI chrNW_004936837:827,568...838,933 JBrowse link
G Pparg peroxisome proliferator activated receptor gamma enables ISO (MGI:4881351|PMID:21035761), (PMID:19066220), (PMID:23275342), (PMID:23499423), (PMID:23775123) MGI PMID:19066220 PMID:21035761 PMID:23275342 PMID:23499423 PMID:23775123 MGI:4881351 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:22705949 RGD:7242168 NCBI chrNW_004936477:4,881,230...5,488,208
Ensembl chrNW_004936477:5,199,881...5,488,226 		JBrowse link
G Ppp2r3b protein phosphatase 2 regulatory subunit B''beta enables ISO (PMID:15522233) MGI PMID:15522233 NCBI chrNW_004936644:4,187,961...4,207,779 JBrowse link
G Prdm11 PR/SET domain 11 enables ISO (PMID:25499759) MGI PMID:25499759 NCBI chrNW_004936562:3,624,739...3,665,016
Ensembl chrNW_004936562:3,622,943...3,665,063 		JBrowse link
G Prdm13 PR/SET domain 13 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936651:1,199,928...1,208,697
Ensembl chrNW_004936651:1,200,089...1,207,872 		JBrowse link
G Prdm8 PR/SET domain 8 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936749:1,819,491...1,827,440
Ensembl chrNW_004936749:1,820,235...1,823,714 		JBrowse link
G Primpol primase and DNA directed polymerase enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936554:4,536,246...4,571,000
Ensembl chrNW_004936554:4,534,970...4,569,549 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:1,817,051...1,843,376
Ensembl chrNW_004936518:1,804,969...1,843,380 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:4,872,360...4,939,873
Ensembl chrNW_004936522:4,875,046...4,939,879 		JBrowse link
G Prkcb protein kinase C beta enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:8,410,273...8,729,238
Ensembl chrNW_004936501:8,437,715...8,728,716 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 enables ISO (PMID:18347060) MGI PMID:18347060 NCBI chrNW_004936722:1,379,515...1,388,538
Ensembl chrNW_004936722:1,379,515...1,388,546 		JBrowse link
G Prmt6 protein arginine methyltransferase 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936731:1,262,335...1,268,200
Ensembl chrNW_004936731:1,266,738...1,267,865 		JBrowse link
G Prop1 PROP paired-like homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936739:1,854,072...1,856,657
Ensembl chrNW_004936739:1,854,072...1,856,657 		JBrowse link
G Psip1 PC4 and SRSF1 interacting protein 1 enables ISO (PMID:20974633) UniProt PMID:20974633 NCBI chrNW_004936539:8,894,285...8,940,831
Ensembl chrNW_004936539:8,892,841...8,940,871 		JBrowse link
G Ptf1a pancreas associated transcription factor 1a enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:4,978,896...4,980,648
Ensembl chrNW_004936520:4,978,896...4,980,648 		JBrowse link
G Pus1 pseudouridine synthase 1 enables ISO (PMID:15327771) MGI PMID:15327771 NCBI chrNW_004936660:2,192,583...2,199,645
Ensembl chrNW_004936660:2,192,651...2,199,602 		JBrowse link
G Pwwp2a PWWP domain containing 2A enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936515:3,399,339...3,436,003 JBrowse link
G Pygo2 pygopus family PHD finger 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:4,506,982...4,511,044
Ensembl chrNW_004936580:4,507,925...4,511,107 		JBrowse link
G Rad17 RAD17 checkpoint clamp loader component enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936480:216,216...252,178
Ensembl chrNW_004936480:216,208...252,070 		JBrowse link
G Rad21 RAD21 cohesin complex component enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:29,377,793...29,403,422
Ensembl chrNW_004936470:29,377,734...29,407,312 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:17,413,006...17,435,951
Ensembl chrNW_004936485:17,413,006...17,435,951 		JBrowse link
G Rad51 RAD51 recombinase enables ISO (PMID:23401855)
(PMID:24108124)		 UniProt
MGI		 PMID:23401855 PMID:24108124 NCBI chrNW_004936471:4,119,020...4,136,811
Ensembl chrNW_004936471:4,114,530...4,136,248 		JBrowse link
G Rag2 recombination activating 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936533:1,801,207...1,807,431
Ensembl chrNW_004936533:1,801,391...1,807,431 		JBrowse link
G Rara retinoic acid receptor alpha enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,376,217...15,420,638
Ensembl chrNW_004936490:15,376,205...15,421,611 		JBrowse link
G Rarg retinoic acid receptor gamma enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:10,502,954...10,524,796
Ensembl chrNW_004936512:10,500,622...10,524,824 		JBrowse link
G Rbmx RNA binding motif protein X-linked enables ISO (PMID:18541147) UniProt PMID:18541147 NCBI chrNW_004936513:10,429,862...10,442,509
Ensembl chrNW_004936513:10,429,824...10,437,108 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:3,354,336...3,445,248
Ensembl chrNW_004936477:3,349,627...3,461,797 		JBrowse link
G Rbpjl recombination signal binding protein for immunoglobulin kappa J region like enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:7,569,970...7,579,601
Ensembl chrNW_004936514:7,569,970...7,578,485 		JBrowse link
G Rcc1 regulator of chromosome condensation 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,635,175...12,646,907
Ensembl chrNW_004936474:12,635,175...12,647,231 		JBrowse link
G Rcor1 REST corepressor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936835:747,758...798,505
Ensembl chrNW_004936835:747,477...799,703 		JBrowse link
G Rec8 REC8 meiotic recombination protein enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936722:369,366...375,243
Ensembl chrNW_004936722:369,423...375,243 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,800,142...3,810,583
Ensembl chrNW_004936599:3,801,636...3,809,813 		JBrowse link
G Rere arginine-glutamic acid dipeptide repeats enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936623:2,678,627...2,942,387
Ensembl chrNW_004936623:2,678,638...2,942,216 		JBrowse link
G Rest RE1 silencing transcription factor enables ISO (PMID:16684532), (PMID:22780989) MGI PMID:16684532 PMID:22780989 NCBI chrNW_004936482:19,018,454...19,040,438 JBrowse link
G Ring1 ring finger protein 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936476:25,643,129...25,646,928
Ensembl chrNW_004936476:25,642,411...25,647,202 		JBrowse link
G Rit2 Ras like without CAAX 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936517:3,145,761...3,535,014
Ensembl chrNW_004936517:3,145,598...3,480,781 		JBrowse link
G Rnf168 ring finger protein 168 enables ISO (PMID:19203578), (PMID:19203579), (PMID:19500350) UniProt PMID:19203578 PMID:19203579 PMID:19500350 NCBI chrNW_004936784:1,073,236...1,094,575 JBrowse link
G Rnf2 ring finger protein 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936481:5,070,578...5,110,087
Ensembl chrNW_004936481:5,070,578...5,110,068 		JBrowse link
G Rnf20 ring finger protein 20 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:9,690,611...9,715,579
Ensembl chrNW_004936524:9,690,566...9,717,173 		JBrowse link
G Rnf8 ring finger protein 8 enables ISO (PMID:18001824), (PMID:18001825) UniProt PMID:18001824 PMID:18001825 NCBI chrNW_004936476:22,074,146...22,121,286 JBrowse link
G Rpa1 replication protein A1 enables ISO (PMID:12091911) MGI PMID:12091911 NCBI chrNW_004936538:7,941,074...7,997,062
Ensembl chrNW_004936538:7,946,403...7,994,864 		JBrowse link
G Runx2 RUNX family transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:14,695,965...14,818,246
Ensembl chrNW_004936476:14,695,965...14,905,157 		JBrowse link
G Safb scaffold attachment factor B enables ISO (MGI:5284748|PMID:19403048) UniProt PMID:19403048 MGI:5284748 NCBI chrNW_004936588:3,225,315...3,253,689
Ensembl chrNW_004936588:3,225,752...3,253,678 		JBrowse link
G Sall1 spalt like transcription factor 1 enables ISO (PMID:20439720) MGI PMID:20439720 NCBI chrNW_004936475:4,106,663...4,121,356
Ensembl chrNW_004936475:4,106,084...4,121,413 		JBrowse link
G Samd1 sterile alpha motif domain containing 1 enables ISO (PMID:33980486) UniProt PMID:33980486 NCBI chrNW_004936659:2,744,967...2,750,135 JBrowse link
G Samd13 sterile alpha motif domain containing 13 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936608:1,246,299...1,296,991
Ensembl chrNW_004936608:1,246,299...1,293,865 		JBrowse link
G Samd7 sterile alpha motif domain containing 7 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936593:2,475,199...2,500,593
Ensembl chrNW_004936593:2,472,946...2,500,604 		JBrowse link
G Sarnp SAP domain containing ribonucleoprotein enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:226,333...280,562
Ensembl chrNW_004936646:232,356...280,589 		JBrowse link
G Satb1 SATB homeobox 1 enables ISO (PMID:21930775) MGI PMID:21930775 NCBI chrNW_004936473:10,906,059...11,001,007
Ensembl chrNW_004936473:10,904,989...11,001,051 		JBrowse link
G Satb2 SATB homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936506:34,968...206,432
Ensembl chrNW_004936506:34,962...206,490 		JBrowse link
G Scmh1 Scm polycomb group protein homolog 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:22,648,156...22,784,399
Ensembl chrNW_004936474:22,647,334...22,774,405 		JBrowse link
G Scml2 Scm polycomb group protein like 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:7,457,995...7,508,069
Ensembl chrNW_004936470:7,458,007...7,508,069 		JBrowse link
G Scml4 Scm polycomb group protein like 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936564:4,042,148...4,144,950
Ensembl chrNW_004936564:4,043,248...4,144,950 		JBrowse link
G Set SET nuclear proto-oncogene enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936487:16,181,764...16,184,706 JBrowse link
G Setd7 SET domain containing 7, histone lysine methyltransferase enables ISO
IEA		 RGD
TreeGrafter		 PMID:20930066 GO_REF:0000118 RGD:9491847 NCBI chrNW_004936535:8,094,479...8,143,108
Ensembl chrNW_004936535:8,094,178...8,137,580 		JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 enables ISO (PMID:27029610)
(PMID:22079090)		 UniProt
MGI		 PMID:22079090 PMID:27029610 NCBI chrNW_004936580:1,146,286...1,192,842
Ensembl chrNW_004936580:1,146,277...1,192,842 		JBrowse link
G Sf3b1 splicing factor 3b subunit 1 enables ISO (PMID:15741318), (PMID:20153721) MGI PMID:15741318 PMID:20153721 NCBI chrNW_004936506:1,749,591...1,790,860
Ensembl chrNW_004936506:1,749,563...1,791,739 		JBrowse link
G Sfmbt1 Scm like with four mbt domains 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936473:3,650,096...3,784,191
Ensembl chrNW_004936473:3,654,555...3,781,577 		JBrowse link
G Sfpq splicing factor proline and glutamine rich enables ISO (MGI:5644022|PMID:19389484) BHF-UCL PMID:19389484 MGI:5644022 NCBI chrNW_004936474:17,776,490...17,791,966 JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:1,422,844...1,427,929
Ensembl chrNW_004936646:1,422,817...1,429,037 		JBrowse link
G Sin3a SIN3 transcription regulator family member A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:34,206,084...34,260,538
Ensembl chrNW_004936471:34,204,524...34,260,564 		JBrowse link
G Sin3b SIN3 transcription regulator family member B enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:3,836,109...3,875,416
Ensembl chrNW_004936596:3,837,826...3,875,402 		JBrowse link
G Sirt2 sirtuin 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:1,828,868...1,849,892
Ensembl chrNW_004936661:1,828,831...1,850,000 		JBrowse link
G Sirt6 sirtuin 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,387,162...2,394,066
Ensembl chrNW_004936588:2,386,977...2,394,096 		JBrowse link
G Sirt7 sirtuin 7 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:5,418,331...5,425,050
Ensembl chrNW_004936594:5,418,796...5,424,988 		JBrowse link
G Six1 SIX homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:4,839,496...4,842,906
Ensembl chrNW_004936495:4,838,051...4,842,994 		JBrowse link
G Ski SKI proto-oncogene enables ISO (PMID:19008232) MGI PMID:19008232 NCBI chrNW_004936737:1,223,653...1,274,664
Ensembl chrNW_004936737:1,222,341...1,276,631 		JBrowse link
G Skil SKI like proto-oncogene enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936593:2,109,414...2,132,871
Ensembl chrNW_004936593:2,109,223...2,132,882 		JBrowse link
G Skor2 SKI family transcriptional corepressor 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936983:156,466...197,281
Ensembl chrNW_004936983:161,836...197,276 		JBrowse link
G Slc30a9 solute carrier family 30 member 9 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:9,186,044...9,282,646
Ensembl chrNW_004936482:9,186,198...9,281,242 		JBrowse link
G Smad2 SMAD family member 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:14,723,199...14,812,160
Ensembl chrNW_004936497:14,723,199...14,801,697 		JBrowse link
G Smad3 SMAD family member 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793 		JBrowse link
G Smad4 SMAD family member 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123 		JBrowse link
G Smad6 SMAD family member 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:26,781,420...26,856,556
Ensembl chrNW_004936471:26,781,549...26,856,571 		JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936479:2,030,788...2,110,501
Ensembl chrNW_004936479:2,030,716...2,110,661 		JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 enables ISO
IEA		 RGD
TreeGrafter		 PMID:15574597 PMID:16452305 GO_REF:0000118 RGD:9586065 RGD:9586344 NCBI chrNW_004936503:2,835,512...3,001,365
Ensembl chrNW_004936503:2,835,496...3,001,381 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 enables ISO (MGI:5763368|PMID:16245309), (PMID:10318760), (PMID:16287714), (PMID:16322236), (PMID:17074803), (PMID:18267097), (PMID:25119045) RGD
MGI		 PMID:10318760 PMID:16245309 PMID:16287714 PMID:16322236 PMID:16452305 More... MGI:5763368 RGD:9586344 NCBI chrNW_004936659:1,152,846...1,246,718
Ensembl chrNW_004936659:1,169,792...1,249,213 		JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936535:4,857,816...4,890,266
Ensembl chrNW_004936535:4,856,672...4,890,225 		JBrowse link
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936687:1,728,848...1,803,992
Ensembl chrNW_004936687:1,729,417...1,803,992 		JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:1,257,723...1,407,358
Ensembl chrNW_004936596:1,255,054...1,408,038 		JBrowse link
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:571,745...594,365
Ensembl chrNW_004936646:572,340...592,766 		JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 ISO RGD PMID:24615205 RGD:9586357 NCBI chrNW_004936512:7,747,066...7,759,943
Ensembl chrNW_004936512:7,747,481...7,758,271 		JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 ISO RGD PMID:23110084 RGD:9586362 NCBI chrNW_004936527:6,643,182...6,675,708
Ensembl chrNW_004936527:6,643,075...6,675,883 		JBrowse link
G Smc1a structural maintenance of chromosomes 1A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936751:332,351...388,756
Ensembl chrNW_004936751:349,597...388,755 		JBrowse link
G Smc2 structural maintenance of chromosomes 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936793:909,663...958,883
Ensembl chrNW_004936793:910,654...958,811 		JBrowse link
G Smc3 structural maintenance of chromosomes 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:1,409,757...1,436,206
Ensembl chrNW_004936486:1,408,045...1,435,875 		JBrowse link
G Smc4 structural maintenance of chromosomes 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936708:362,605...395,217
Ensembl chrNW_004936708:362,603...395,246 		JBrowse link
G Snai2 snail family transcriptional repressor 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936590:3,813,916...3,817,642
Ensembl chrNW_004936590:3,813,888...3,817,642 		JBrowse link
G Sox10 SRY-box transcription factor 10 enables ISO
IEA		 RGD
Ensembl		 PMID:27466180 GO_REF:0000107 RGD:12879825 NCBI chrNW_004936492:3,173,770...3,183,423
Ensembl chrNW_004936492:3,173,741...3,185,024 		JBrowse link
G Sox14 SRY-box transcription factor 14 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:160,638...162,662
Ensembl chrNW_004936540:161,124...161,846 		JBrowse link
G Sox15 SRY-box transcription factor 15 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:865,878...868,241
Ensembl chrNW_004936595:861,223...867,850 		JBrowse link
G Sox2 SRY-box transcription factor 2 enables ISO (PMID:15988017) MGI PMID:15988017 NCBI chrNW_004936566:1,630,698...1,632,607
Ensembl chrNW_004936566:1,631,822...1,632,613 		JBrowse link
G Sox9 SRY-box transcription factor 9 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705 		JBrowse link
G Sp3 Sp3 transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:3,740,393...3,782,873
Ensembl chrNW_004936509:3,741,836...3,793,136 		JBrowse link
G Spi1 Spi-1 proto-oncogene enables ISO (MGI:6381024|PMID:30911105), (MGI:6508514|PMID:30171019) ARUK-UCL PMID:30171019 PMID:30911105 MGI:6381024 MGI:6508514 NCBI chrNW_004936562:1,852,759...1,870,647
Ensembl chrNW_004936562:1,852,740...1,870,472 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 enables ISO
IEA		 RGD
Ensembl		 PMID:19371623 GO_REF:0000107 RGD:8693606 NCBI chrNW_004936741:1,408,669...1,419,717
Ensembl chrNW_004936741:1,406,521...1,419,776 		JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 ISO RGD PMID:19470373 RGD:2308817 NCBI chrNW_004936492:115,923...174,614
Ensembl chrNW_004936492:115,821...174,775 		JBrowse link
G Srf serum response factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130 		JBrowse link
G Ssbp1 single stranded DNA binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936592:5,611,775...5,620,846
Ensembl chrNW_004936592:5,614,619...5,619,627 		JBrowse link
G Ssrp1 structure specific recognition protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:5,148,108...5,157,630
Ensembl chrNW_004936581:5,148,050...5,157,667 		JBrowse link
G Stag1 STAG1 cohesin complex component enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:9,173,162...9,530,321
Ensembl chrNW_004936529:9,172,166...9,530,304 		JBrowse link
G Stag2 STAG2 cohesin complex component enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936479:6,508,539...6,635,127
Ensembl chrNW_004936479:6,508,532...6,632,627 		JBrowse link
G Stag3 STAG3 cohesin complex component enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936543:430,804...458,112
Ensembl chrNW_004936543:432,552...458,112 		JBrowse link
G Stpg1 sperm tail PG-rich repeat containing 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:9,358,114...9,398,379
Ensembl chrNW_004936474:9,358,116...9,398,271 		JBrowse link
G Stpg4 sperm-tail PG-rich repeat containing 4 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936508:5,229,734...5,267,094
Ensembl chrNW_004936508:5,227,465...5,267,071 		JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,280,390...2,308,085
Ensembl chrNW_004936661:2,280,285...2,308,780 		JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase enables ISO (MGI:1927682|PMID:11094092) UniProt PMID:11094092 MGI:1927682 NCBI chrNW_004936613:1,443,663...1,467,776
Ensembl chrNW_004936613:1,443,629...1,467,229 		JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:2,921,987...2,971,521
Ensembl chrNW_004936538:2,921,719...2,971,552 		JBrowse link
G Svep1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936559:2,556,207...2,726,670
Ensembl chrNW_004936559:2,556,207...2,726,635 		JBrowse link
G Tada2a transcriptional adaptor 2A enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:873,675...924,582
Ensembl chrNW_004936490:872,945...924,614 		JBrowse link
G Tada2b transcriptional adaptor 2B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936477:18,876,132...18,878,760
Ensembl chrNW_004936477:18,877,501...18,878,529 		JBrowse link
G Taf2 TATA-box binding protein associated factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:26,871,865...26,951,804
Ensembl chrNW_004936470:26,871,847...26,951,806 		JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:28,049,326...28,061,495
Ensembl chrNW_004936474:28,047,808...28,056,065 		JBrowse link
G Tasor transcription activation suppressor enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936473:7,053,797...7,098,608
Ensembl chrNW_004936473:7,055,462...7,098,358 		JBrowse link
G Tbl1x transducin beta like 1 X-linked enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936644:237,638...282,470 JBrowse link
G Tbl1xr1 TBL1X/Y related 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936566:5,721,541...5,861,838
Ensembl chrNW_004936566:5,790,532...5,861,838 		JBrowse link
G Tcf3 transcription factor 3 enables ISO (PMID:18550854), (PMID:19011221) MGI PMID:18550854 PMID:19011221 NCBI chrNW_004936588:884,817...913,052
Ensembl chrNW_004936588:884,789...912,753 		JBrowse link
G Tcf4 transcription factor 4 enables ISO (PMID:24192035) MGI PMID:24192035 NCBI chrNW_004936497:8,410,882...8,765,678
Ensembl chrNW_004936497:8,410,860...8,764,296 		JBrowse link
G Tcf7l1 transcription factor 7 like 1 enables ISO (PMID:18202148), (PMID:18467660) MGI PMID:18202148 PMID:18467660 NCBI chrNW_004936712:1,848,478...1,962,644
Ensembl chrNW_004936712:1,848,464...1,962,650 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 enables ISO (PMID:17727834)
(PMID:23824574)		 MGI PMID:17727834 PMID:23824574 NCBI chrNW_004936486:3,473,877...3,660,565
Ensembl chrNW_004936486:3,473,843...3,660,576 		JBrowse link
G Tdrd3 tudor domain containing 3 enables ISO (PMID:21172665) UniProt PMID:21172665 NCBI chrNW_004936511:11,258,898...11,348,522 JBrowse link
G Tfam transcription factor A, mitochondrial enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936614:4,595,973...4,605,040
Ensembl chrNW_004936614:4,596,617...4,605,104 		JBrowse link
G Tfap2a transcription factor AP-2 alpha enables ISO (MGI:3054669|PMID:15475956), (PMID:18224708) MGI PMID:15475956 PMID:18224708 MGI:3054669 NCBI chrNW_004936534:2,481,804...2,518,573
Ensembl chrNW_004936534:2,481,806...2,499,317 		JBrowse link
G Tfap2b transcription factor AP-2 beta ISO RGD PMID:20875861 RGD:5147969 NCBI chrNW_004936476:9,855,992...9,884,788
Ensembl chrNW_004936476:9,857,773...9,884,784 		JBrowse link
G Tgif1 TGFB induced factor homeobox 1 enables ISO (PMID:16428452) MGI PMID:16428452 NCBI chrNW_004936672:1,128,104...1,135,844
Ensembl chrNW_004936672:1,128,108...1,136,292 		JBrowse link
G Thrb thyroid hormone receptor beta enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:15,766,214...15,986,389
Ensembl chrNW_004936473:15,770,146...15,986,561 		JBrowse link
G Ticrr TOPBP1 interacting checkpoint and replication regulator enables ISO (PMID:20080954) UniProt PMID:20080954 NCBI chrNW_004936483:15,381,486...15,422,600 JBrowse link
G Tle1 TLE family member 1, transcriptional corepressor enables ISO (PMID:16002402) MGI PMID:16002402 NCBI chrNW_004936632:1,316,812...1,407,817
Ensembl chrNW_004936632:1,316,812...1,408,746 		JBrowse link
G Tle4 TLE family member 4, transcriptional corepressor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936632:3,077,594...3,213,763
Ensembl chrNW_004936632:3,077,563...3,213,763 		JBrowse link
G Tnrc18 trinucleotide repeat containing 18 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936765:763,111...854,645
Ensembl chrNW_004936765:765,639...852,215 		JBrowse link
G Top1 DNA topoisomerase I enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:641,451...723,323
Ensembl chrNW_004936561:641,423...723,518 		JBrowse link
G Top2a DNA topoisomerase II alpha enables ISO
IEA		 RGD
Ensembl		 PMID:11334111 GO_REF:0000107 RGD:1580614 NCBI chrNW_004936490:15,441,463...15,465,692
Ensembl chrNW_004936490:15,441,575...15,466,978 		JBrowse link
G Top2b DNA topoisomerase II beta enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:17,146,576...17,189,589
Ensembl chrNW_004936473:17,143,894...17,189,605 		JBrowse link
G Tox3 TOX high mobility group box family member 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:5,283,615...5,388,104
Ensembl chrNW_004936475:5,283,622...5,388,067 		JBrowse link
G Tp53 tumor protein p53 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425 		JBrowse link
G Tp63 tumor protein p63 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:492,267...705,282
Ensembl chrNW_004936578:491,507...705,729 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:4,050,693...4,111,682
Ensembl chrNW_004936481:4,050,794...4,111,682 		JBrowse link
G Trim24 tripartite motif containing 24 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936592:2,902,805...2,962,602
Ensembl chrNW_004936592:2,863,743...2,963,977 		JBrowse link
G Trim28 tripartite motif containing 28 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004937062:126,832...132,938
Ensembl chrNW_004937062:126,708...134,366 		JBrowse link
G Trim37 tripartite motif containing 37 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:4,163,871...4,310,016
Ensembl chrNW_004936490:4,163,719...4,354,932 		JBrowse link
G Trim66 tripartite motif containing 66 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:9,358,976...9,410,425
Ensembl chrNW_004936528:9,358,950...9,529,842 		JBrowse link
G Trrap transformation/transcription domain associated protein ISO RGD PMID:11511539 RGD:9588238 NCBI chrNW_004936750:1,245,926...1,360,226
Ensembl chrNW_004936750:1,248,320...1,359,473 		JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:4,250,988...4,255,789
Ensembl chrNW_004936570:4,195,428...4,255,868 		JBrowse link
G Tspyl1 TSPY like 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936824:857,696...860,604
Ensembl chrNW_004936824:859,235...860,503 		JBrowse link
G Tspyl2 TSPY like 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936751:85,104...91,596
Ensembl chrNW_004936751:85,248...91,000 		JBrowse link
G Tspyl4 TSPY like 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936824:842,698...846,653
Ensembl chrNW_004936824:845,325...846,560 		JBrowse link
G Tspyl5 TSPY like 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:45,385,155...45,410,307
Ensembl chrNW_004936470:45,385,239...45,386,486 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:13,365,168...13,454,340
Ensembl chrNW_004936469:13,365,087...13,454,340 		JBrowse link
G Ttc5 tetratricopeptide repeat domain 5 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936877:504,406...520,295
Ensembl chrNW_004936877:501,743...520,316 		JBrowse link
G Ttf1 transcription termination factor 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936487:18,956,364...18,983,850
Ensembl chrNW_004936487:18,956,899...18,983,888 		JBrowse link
G Twist2 twist family bHLH transcription factor 2 enables ISO (PMID:16831897) MGI PMID:16831897 NCBI chrNW_004936745:2,067,272...2,067,948
Ensembl chrNW_004936745:2,028,286...2,067,948 		JBrowse link
G Ube2t ubiquitin conjugating enzyme E2 T enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:2,222,317...2,226,725
Ensembl chrNW_004936567:2,222,317...2,226,678 		JBrowse link
G Ubtf upstream binding transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:671,178...687,485
Ensembl chrNW_004936541:671,157...684,240 		JBrowse link
G Upf1 UPF1 RNA helicase and ATPase enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:2,469,444...2,505,688
Ensembl chrNW_004936596:2,468,116...2,505,688 		JBrowse link
G Uri1 URI1 prefoldin like chaperone enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936570:5,379,253...5,419,595
Ensembl chrNW_004936570:5,376,658...5,419,345 		JBrowse link
G Usp51 ubiquitin specific peptidase 51 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936819:1,115,524...1,119,083
Ensembl chrNW_004936819:1,116,447...1,118,558 		JBrowse link
G Uxt ubiquitously expressed prefoldin like chaperone enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:13,419,520...13,427,777
Ensembl chrNW_004936502:13,418,403...13,427,767 		JBrowse link
G Wac WW domain containing adaptor with coiled-coil enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936613:2,793,706...2,862,984
Ensembl chrNW_004936613:2,794,732...2,865,913 		JBrowse link
G Wdhd1 WD repeat and HMG-box DNA binding protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936697:129,821...184,238
Ensembl chrNW_004936697:130,105...183,576 		JBrowse link
G Wdr82 WD repeat domain 82 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:3,569,354...3,591,815
Ensembl chrNW_004936529:3,568,184...3,592,084 		JBrowse link
G Wrn WRN RecQ like helicase ISO RGD PMID:19737542 RGD:10042988 NCBI chrNW_004936792:862,659...1,005,065
Ensembl chrNW_004936792:862,383...1,005,755 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:5,638,383...5,740,523
Ensembl chrNW_004936551:5,634,751...5,740,567 		JBrowse link
G Ybx1 Y-box binding protein 1 enables ISO (PMID:24788519) MGI PMID:24788519 NCBI chrNW_004936474:24,026,459...24,047,724
Ensembl chrNW_004936474:24,026,377...24,047,724 		JBrowse link
G Ybx2 Y-box binding protein 2 enables ISO (PMID:15665108) MGI PMID:15665108 NCBI chrNW_004936595:574,264...579,959
Ensembl chrNW_004936595:574,089...579,959 		JBrowse link
G Yy1 YY1 transcription factor enables ISO (PMID:24137001) MGI PMID:24137001 NCBI chrNW_004936604:3,911,407...3,945,405 JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:19,714,145...19,722,512
Ensembl chrNW_004936474:19,714,153...19,722,528 		JBrowse link
G Zc3h4 zinc finger CCCH-type containing 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:832,500...872,752
Ensembl chrNW_004936664:834,684...872,162 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 enables ISO
IEA		 RGD
Ensembl		 PMID:16824956 GO_REF:0000107 RGD:2325877 NCBI chrNW_004936574:17,643...175,762
Ensembl chrNW_004936574:17,684...178,293 		JBrowse link
G Zfp57 ZFP57 zinc finger protein enables ISO (PMID:30602440)
(MGI:6284037|PMID:30602440)		 UniProt PMID:30602440 MGI:6284037 NCBI chrNW_004936723:1,063,969...1,069,986 JBrowse link
G Zkscan3 zinc finger with KRAB and SCAN domains 3 enables ISO (PMID:18940803) UniProt PMID:18940803 NCBI chrNW_004936772:43...7,099 JBrowse link
G Znf143 zinc finger protein 143 ISO RGD PMID:21352097 RGD:9743924 NCBI chrNW_004936528:8,614,393...8,676,301
Ensembl chrNW_004936528:8,614,180...8,676,293 		JBrowse link
G Znf274 zinc finger protein 274 enables ISO (PMID:27029610) UniProt PMID:27029610 NCBI chrNW_004936897:657,094...672,964 JBrowse link
G Znf445 zinc finger protein 445 enables ISO (MGI:6284037|PMID:30602440) UniProt PMID:30602440 MGI:6284037 NCBI chrNW_004936695:1,066,703...1,087,289 JBrowse link
G Znhit1 zinc finger HIT-type containing 1 enables ISO (PMID:19501046) MGI PMID:19501046 NCBI chrNW_004936543:1,098,095...1,104,731
Ensembl chrNW_004936543:1,097,588...1,105,162 		JBrowse link
chromatin DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936801:1,333,077...1,402,885
Ensembl chrNW_004936801:1,333,077...1,404,054 		JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936877:666,545...669,351
Ensembl chrNW_004936877:666,523...669,338 		JBrowse link
G Atoh1 atonal bHLH transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936687:1,435,977...1,437,138
Ensembl chrNW_004936687:1,436,009...1,437,067 		JBrowse link
G Atrx ATRX chromatin remodeler enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936683:2,496,307...2,718,539
Ensembl chrNW_004936683:2,495,959...2,718,620 		JBrowse link
G Bap1 BRCA1 associated protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,239,009...3,247,806
Ensembl chrNW_004936473:3,239,010...3,247,806 		JBrowse link
G Bcl6 BCL6 transcription repressor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:2,371,976...2,395,034
Ensembl chrNW_004936578:2,371,945...2,395,071 		JBrowse link
G Cebpa CCAAT enhancer binding protein alpha enables ISO (PMID:25921091) MGI PMID:25921091 NCBI chrNW_004936570:2,513,561...2,516,213 JBrowse link
G Clock clock circadian regulator enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:17,789,834...17,900,371
Ensembl chrNW_004936482:17,794,134...17,845,303 		JBrowse link
G Crebbp CREB binding protein enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936694:552,447...663,237
Ensembl chrNW_004936694:553,753...663,617 		JBrowse link
G Ddx17 DEAD-box helicase 17 enables ISO (PMID:29431742) MGI PMID:29431742 NCBI chrNW_004936492:2,806,630...2,826,071
Ensembl chrNW_004936492:2,806,516...2,827,181 		JBrowse link
G Dhx9 DExH-box helicase 9 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:6,896,487...6,934,938
Ensembl chrNW_004936481:6,896,359...6,935,623 		JBrowse link
G Eomes eomesodermin enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:18,825,969...18,833,179
Ensembl chrNW_004936473:18,825,942...18,833,179 		JBrowse link
G Ep300 E1A binding protein p300 enables ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:20702579 GO_REF:0000107 GO_REF:0000118 RGD:5128544 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:5,024,077...5,069,152
Ensembl chrNW_004936527:5,024,068...5,063,939 		JBrowse link
G Foxc2 forkhead box C2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:2,236,224...2,238,501
Ensembl chrNW_004936641:2,236,873...2,238,375 		JBrowse link
G Foxo1 forkhead box O1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936565:5,210,014...5,299,213
Ensembl chrNW_004936565:5,210,014...5,302,436 		JBrowse link
G Foxo3 forkhead box O3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936564:4,788,036...4,907,600
Ensembl chrNW_004936564:4,787,992...4,903,837 		JBrowse link
G Gata1 GATA binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936721:742,862...750,843
Ensembl chrNW_004936721:742,862...750,768 		JBrowse link
G Gli2 GLI family zinc finger 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213 		JBrowse link
G Grhl1 grainyhead like transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:6,199,525...6,247,282
Ensembl chrNW_004936532:6,199,453...6,247,295 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:41,856,683...41,961,666
Ensembl chrNW_004936470:41,859,035...42,002,844 		JBrowse link
G Grhl3 grainyhead like transcription factor 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:9,321,754...9,354,486
Ensembl chrNW_004936474:9,332,444...9,353,893 		JBrowse link
G H1-1 H1.1 linker histone, cluster member enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:1,876,497...1,878,006
Ensembl chrNW_004936671:1,877,303...1,877,959 		JBrowse link
G H1-2 H1.2 linker histone, cluster member enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:1,907,356...1,911,821
Ensembl chrNW_004936671:1,907,321...1,911,851 		JBrowse link
G H1-5 H1.5 linker histone, cluster member enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:3,163,792...3,164,532
Ensembl chrNW_004936671:3,163,825...3,164,505 		JBrowse link
G Hcfc1 host cell factor C1 enables ISO (PMID:22878500) MGI PMID:22878500 NCBI chrNW_004936809:827,008...853,689
Ensembl chrNW_004936809:827,031...853,644 		JBrowse link
G Hdac2 histone deacetylase 2 enables ISO (PMID:18458156) MGI PMID:18458156 NCBI chrNW_004936679:2,448,676...2,474,641
Ensembl chrNW_004936679:2,448,390...2,474,641 		JBrowse link
G Hdac3 histone deacetylase 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:12,530,546...12,546,556
Ensembl chrNW_004936504:12,530,528...12,546,556 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U enables ISO (PMID:11003645) UniProt PMID:11003645 NCBI chrNW_004936526:6,014,745...6,022,213 JBrowse link
G Hr HR lysine demethylase and nuclear receptor corepressor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936555:5,936,431...5,954,852
Ensembl chrNW_004936555:5,936,220...5,954,974 		JBrowse link
G Hsf1 heat shock transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337 		JBrowse link
G Insm1 INSM transcriptional repressor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:66,889...69,792
Ensembl chrNW_004936485:68,004...69,596 		JBrowse link
G Jmjd1c jumonji domain containing 1C enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936753:1,413,935...1,645,974
Ensembl chrNW_004936753:1,414,240...1,645,161 		JBrowse link
G Kdm3a lysine demethylase 3A enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936712:1,053,210...1,097,845
Ensembl chrNW_004936712:1,053,210...1,096,961 		JBrowse link
G Kdm3b lysine demethylase 3B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936531:7,517,810...7,600,319
Ensembl chrNW_004936531:7,516,125...7,600,347 		JBrowse link
G Kdm5a lysine demethylase 5A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:486,424...570,546
Ensembl chrNW_004936606:485,655...570,739 		JBrowse link
G Kdm6a lysine demethylase 6A enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936502:10,980,303...11,196,711
Ensembl chrNW_004936502:10,980,118...11,196,163 		JBrowse link
G Kdm6b lysine demethylase 6B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936595:1,077,318...1,099,082
Ensembl chrNW_004936595:1,089,544...1,097,595 		JBrowse link
G Klf4 KLF transcription factor 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936559:5,105,456...5,109,970
Ensembl chrNW_004936559:5,105,463...5,109,970 		JBrowse link
G Lemd2 LEM domain nuclear envelope protein 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936476:25,170,954...25,188,298
Ensembl chrNW_004936476:25,170,973...25,186,965 		JBrowse link
G Lemd3 LEM domain containing 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936545:3,385,821...3,453,861
Ensembl chrNW_004936545:3,385,062...3,454,243 		JBrowse link
G LOC101956559 core histone macro-H2A.2 enables IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936521:8,474,408...8,509,269
Ensembl chrNW_004936521:8,473,794...8,509,268 		JBrowse link
G LOC101967900 lysine-specific demethylase 4D enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936674:53,200...73,042 JBrowse link
G LOC101970440 histone H1.0 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:3,314,991...3,315,974
Ensembl chrNW_004936492:3,315,048...3,315,632 		JBrowse link
G LOC101971629 core histone macro-H2A.1 enables IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936597:2,496,489...2,556,352
Ensembl chrNW_004936597:2,495,862...2,556,603 		JBrowse link
G LOC101972263 WW domain-binding protein 2-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936748:428,775...434,392 JBrowse link
G LOC101974663 histone H2A.Z enables ISO (PMID:19834540), (PMID:23637611) UniProt PMID:19834540 PMID:23637611 NCBI chrNW_004936520:3,059,623...3,061,941 JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:9038338 RGD:1601325 NCBI chrNW_004936809:902,938...967,771
Ensembl chrNW_004936809:911,764...966,839 		JBrowse link
G Med1 mediator complex subunit 1 ISO RGD PMID:20702579 RGD:5128544 NCBI chrNW_004936490:14,625,201...14,663,184
Ensembl chrNW_004936490:14,625,897...14,657,802 		JBrowse link
G Myod1 myogenic differentiation 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:1,407,187...1,409,683
Ensembl chrNW_004936528:1,407,661...1,409,573 		JBrowse link
G Myog myogenin enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:1,507,042...1,509,814
Ensembl chrNW_004936567:1,507,042...1,509,815 		JBrowse link
G Neurog3 neurogenin 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:8,932,998...8,933,645
Ensembl chrNW_004936521:8,932,998...8,933,645 		JBrowse link
G Nkap NFKB activating protein enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:10,024,674...10,041,738
Ensembl chrNW_004936479:10,024,705...10,041,590 		JBrowse link
G Notch1 notch receptor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428 		JBrowse link
G Nr1h2 nuclear receptor subfamily 1 group H member 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936889:223,137...229,968
Ensembl chrNW_004936889:223,101...229,990 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:1,937,665...1,946,680
Ensembl chrNW_004936562:1,937,667...1,946,669 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:99,335...137,833
Ensembl chrNW_004936762:99,293...137,874 		JBrowse link
G Pax6 paired box 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936533:5,952,529...5,980,889
Ensembl chrNW_004936533:5,957,971...5,982,075 		JBrowse link
G Per1 period circadian regulator 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,366,883...1,382,138
Ensembl chrNW_004936595:1,366,875...1,382,170 		JBrowse link
G Pitx2 paired like homeodomain 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936563:1,713,294...1,732,431 JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936559:220,941...222,783 JBrowse link
G Pou5f1 POU class 5 homeobox 1 enables ISO (PMID:24268575) MGI PMID:24268575 NCBI chrNW_004936837:827,568...838,933 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha enables IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936477:4,881,230...5,488,208
Ensembl chrNW_004936477:5,199,881...5,488,226 		JBrowse link
G Prdm14 PR/SET domain 14 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:14,789,443...14,820,967
Ensembl chrNW_004936496:14,806,928...14,820,967 		JBrowse link
G Rara retinoic acid receptor alpha enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,376,217...15,420,638
Ensembl chrNW_004936490:15,376,205...15,421,611 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,800,142...3,810,583
Ensembl chrNW_004936599:3,801,636...3,809,813 		JBrowse link
G Runx2 RUNX family transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:14,695,965...14,818,246
Ensembl chrNW_004936476:14,695,965...14,905,157 		JBrowse link
G Ruvbl2 RuvB like AAA ATPase 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:2,995,212...3,010,563
Ensembl chrNW_004936664:2,995,213...3,010,853 		JBrowse link
G Rxra retinoid X receptor alpha enables ISO (PMID:17952069), (PMID:29431742) MGI PMID:17952069 PMID:29431742 NCBI chrNW_004936669:2,735,111...2,763,060
Ensembl chrNW_004936669:2,738,448...2,763,070 		JBrowse link
G Rxrb retinoid X receptor beta enables ISO (PMID:29431742) MGI PMID:29431742 NCBI chrNW_004936476:25,655,164...25,662,369
Ensembl chrNW_004936476:25,655,209...25,662,416 		JBrowse link
G Sbno1 strawberry notch homolog 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936558:1,383,652...1,442,298
Ensembl chrNW_004936558:1,393,799...1,442,298 		JBrowse link
G Sbno2 strawberry notch homolog 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936588:509,244...556,424
Ensembl chrNW_004936588:505,948...541,831 		JBrowse link
G Sirt6 sirtuin 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,387,162...2,394,066
Ensembl chrNW_004936588:2,386,977...2,394,096 		JBrowse link
G Smad3 SMAD family member 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793 		JBrowse link
G Sox2 SRY-box transcription factor 2 enables ISO (PMID:24268575) MGI PMID:24268575 NCBI chrNW_004936566:1,630,698...1,632,607
Ensembl chrNW_004936566:1,631,822...1,632,613 		JBrowse link
G Srf serum response factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,119,189...17,178,402
Ensembl chrNW_004936490:17,117,290...17,178,402 		JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936538:2,921,987...2,971,521
Ensembl chrNW_004936538:2,921,719...2,971,552 		JBrowse link
G Tbr1 T-box brain transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:17,481,049...17,489,535
Ensembl chrNW_004936469:17,479,842...17,490,710 		JBrowse link
G Thra thyroid hormone receptor alpha enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,188,341...15,206,032
Ensembl chrNW_004936490:15,193,150...15,206,784 		JBrowse link
G Thrb thyroid hormone receptor beta enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:15,766,214...15,986,389
Ensembl chrNW_004936473:15,770,146...15,986,561 		JBrowse link
G Top1 DNA topoisomerase I ISO RGD PMID:1332866 RGD:1580856 NCBI chrNW_004936561:641,451...723,323
Ensembl chrNW_004936561:641,423...723,518 		JBrowse link
G Tox thymocyte selection associated high mobility group box enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936496:13,847,210...14,146,110
Ensembl chrNW_004936496:13,847,210...14,147,886 		JBrowse link
G Tox2 TOX high mobility group box family member 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936530:2,646,783...2,774,162
Ensembl chrNW_004936530:2,646,774...2,727,618 		JBrowse link
G Tox3 TOX high mobility group box family member 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:5,283,615...5,388,104
Ensembl chrNW_004936475:5,283,622...5,388,067 		JBrowse link
G Tox4 TOX high mobility group box family member 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936880:628,316...646,006
Ensembl chrNW_004936880:627,576...646,006 		JBrowse link
G Vax1 ventral anterior homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:6,972,972...6,978,544
Ensembl chrNW_004936486:6,974,662...6,978,542 		JBrowse link
G Vax2 ventral anterior homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:15,079,446...15,110,238
Ensembl chrNW_004936491:15,078,598...15,111,252 		JBrowse link
G Wbp2 WW domain binding protein 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:1,023,085...1,031,571 JBrowse link
G Xbp1 X-box binding protein 1 enables ISO (PMID:25280941) UniProt PMID:25280941 NCBI chrNW_004936657:2,891,171...2,895,409
Ensembl chrNW_004936657:2,891,907...2,896,174 		JBrowse link
G Zic2 Zic family member 2 enables ISO (MGI:4833763|PMID:20676059) UniProt PMID:20676059 MGI:4833763 NCBI chrNW_004936472:10,599,717...10,605,187
Ensembl chrNW_004936472:10,602,102...10,605,191 		JBrowse link
chromatin insulator sequence binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctcf CCCTC-binding factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:17,987,137...18,031,733
Ensembl chrNW_004936475:17,987,156...18,031,760 		JBrowse link
G Znf423 zinc finger protein 423 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:2,699,722...2,956,734
Ensembl chrNW_004936475:2,699,702...3,010,912 		JBrowse link
G Znf521 zinc finger protein 521 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936550:4,329,911...4,599,052
Ensembl chrNW_004936550:4,330,695...4,572,028 		JBrowse link
G Znf692 zinc finger protein 692 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936609:602,987...612,182
Ensembl chrNW_004936609:603,120...612,226 		JBrowse link
G Znf774 zinc finger protein 774 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936483:16,615,009...16,623,623
Ensembl chrNW_004936483:16,613,299...16,623,664 		JBrowse link
chromatin loop anchoring activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctcf CCCTC-binding factor enables ISO (PMID:34856126) FlyBase PMID:34856126 NCBI chrNW_004936475:17,987,137...18,031,733
Ensembl chrNW_004936475:17,987,156...18,031,760 		JBrowse link
nucleosomal DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H1-1 H1.1 linker histone, cluster member enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936671:1,876,497...1,878,006
Ensembl chrNW_004936671:1,877,303...1,877,959 		JBrowse link
G H1-2 H1.2 linker histone, cluster member enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936671:1,907,356...1,911,821
Ensembl chrNW_004936671:1,907,321...1,911,851 		JBrowse link
G H1-6 H1.6 linker histone, cluster member enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936671:1,954,740...1,956,298
Ensembl chrNW_004936671:1,955,327...1,955,962 		JBrowse link
G Hmga2 high mobility group AT-hook 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:3,944,419...3,958,289
Ensembl chrNW_004936545:3,944,419...4,064,193 		JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936500:3,845,320...3,852,000
Ensembl chrNW_004936500:3,847,517...3,852,039 		JBrowse link
G Hmgn3 high mobility group nucleosomal binding domain 3 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936510:10,923,014...10,954,354
Ensembl chrNW_004936510:10,923,009...10,954,354 		JBrowse link
G Hmgn5 high mobility group nucleosome binding domain 5 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936547:2,607,491...2,614,037 JBrowse link
G LOC101955795 non-histone chromosomal protein HMG-17-like enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936566:2,434,081...2,434,350 JBrowse link
G LOC101956023 uncharacterized LOC101956023 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936474:10,951,065...10,952,654
Ensembl chrNW_004936474:10,951,040...10,952,622 		JBrowse link
G LOC101956464 non-histone chromosomal protein HMG-17 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936542:8,395,521...8,395,897 JBrowse link
G LOC101956825 non-histone chromosomal protein HMG-17 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936487:9,155,533...9,156,763 JBrowse link
G LOC101958619 non-histone chromosomal protein HMG-17-like enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936471:36,589,205...36,589,581 JBrowse link
G LOC101963041 histone H3.3A enables ISO (PMID:19633671) UniProt PMID:19633671 NCBI chrNW_004936526:2,835,002...2,842,328 JBrowse link
G LOC101963257 histone H3.3A enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:959,493...961,703
Ensembl chrNW_004936594:958,049...961,708 		JBrowse link
G LOC101965662 non-histone chromosomal protein HMG-17-like enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936626:2,238,897...2,240,015 JBrowse link
G LOC101966029 non-histone chromosomal protein HMG-17-like enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936523:2,611,759...2,612,147 JBrowse link
G LOC101966642 non-histone chromosomal protein HMG-17-like enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936622:837,413...838,563 JBrowse link
G LOC101970440 histone H1.0 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936492:3,314,991...3,315,974
Ensembl chrNW_004936492:3,315,048...3,315,632 		JBrowse link
G LOC101971055 histone H1.8 enables ISO (MGI:5559660|PMID:22868987) UniProt PMID:22868987 MGI:5559660 NCBI chrNW_004936602:885,478...890,014 JBrowse link
G LOC101971629 core histone macro-H2A.1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:2,496,489...2,556,352
Ensembl chrNW_004936597:2,495,862...2,556,603 		JBrowse link
G LOC101974663 histone H2A.Z enables ISO (PMID:19633671) UniProt PMID:19633671 NCBI chrNW_004936520:3,059,623...3,061,941 JBrowse link
G Rcc1 regulator of chromosome condensation 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,635,175...12,646,907
Ensembl chrNW_004936474:12,635,175...12,647,231 		JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936596:1,257,723...1,407,358
Ensembl chrNW_004936596:1,255,054...1,408,038 		JBrowse link
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936646:571,745...594,365
Ensembl chrNW_004936646:572,340...592,766 		JBrowse link
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:15,638,546...15,659,372
Ensembl chrNW_004936490:15,638,526...15,659,706 		JBrowse link
G Vrk1 VRK serine/threonine kinase 1 enables ISO (PMID:35390161) UniProt PMID:35390161 NCBI chrNW_004936604:1,011,048...1,097,388
Ensembl chrNW_004936604:1,011,052...1,097,403 		JBrowse link
nucleosome binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr6 actin related protein 6 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936492:13,594,417...13,616,528
Ensembl chrNW_004936492:13,595,222...13,616,555 		JBrowse link
G Arid1a AT-rich interaction domain 1A enables
contributes_to		 IEA
ISO		 (PMID:23129809) TreeGrafter
MGI		 PMID:23129809 GO_REF:0000118 NCBI chrNW_004936474:11,148,857...11,197,312 JBrowse link
G Arid1b AT-rich interaction domain 1B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936489:8,811,094...9,202,423
Ensembl chrNW_004936489:9,087,697...9,205,203 		JBrowse link
G Cabin1 calcineurin binding protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936619:890,474...1,030,914
Ensembl chrNW_004936619:890,299...1,030,899 		JBrowse link
G Cgas cyclic GMP-AMP synthase enables ISO (PMID:32911482), (PMID:32912999), (PMID:33051594)
(MGI:6754862|PMID:32911480), (MGI:6810288|PMID:32911481), (MGI:6828894|PMID:32913000)		 UniProt PMID:32911480 PMID:32911481 PMID:32911482 PMID:32912999 PMID:32913000 More... MGI:6754862 MGI:6810288 MGI:6828894 NCBI chrNW_004936859:797,469...807,036 JBrowse link
G Chd1l chromodomain helicase DNA binding protein 1 like enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004937024:164,309...216,967
Ensembl chrNW_004937024:164,327...216,851 		JBrowse link
G Dnttip1 deoxynucleotidyltransferase terminal interacting protein 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936514:7,209,091...7,231,996
Ensembl chrNW_004936514:7,207,441...7,232,256 		JBrowse link
G Eed embryonic ectoderm development enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936498:14,050,731...14,082,410
Ensembl chrNW_004936498:14,051,045...14,083,570 		JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,430,383...17,465,889
Ensembl chrNW_004936490:17,428,677...17,465,877 		JBrowse link
G Glyr1 glyoxylate reductase 1 homolog enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:4,761,838...4,794,191
Ensembl chrNW_004936530:4,761,823...4,794,729 		JBrowse link
G Hp1bp3 heterochromatin protein 1 binding protein 3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:6,665,989...6,699,722
Ensembl chrNW_004936474:6,665,507...6,700,152 		JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 enables ISO (PMID:17540172) UniProt PMID:17540172 NCBI chrNW_004936530:3,038,873...3,069,724
Ensembl chrNW_004936530:3,038,847...3,069,494 		JBrowse link
G LOC101957075 protein HIRA enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936619:3,282,170...3,380,151
Ensembl chrNW_004936619:3,282,173...3,380,151 		JBrowse link
G LOC101970440 histone H1.0 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:3,314,991...3,315,974
Ensembl chrNW_004936492:3,315,048...3,315,632 		JBrowse link
G Mllt10 MLLT10 histone lysine methyltransferase DOT1L cofactor enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936520:6,176,784...6,366,436
Ensembl chrNW_004936520:6,176,599...6,366,428 		JBrowse link
G Mllt6 MLLT6, PHD finger containing enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:14,113,317...14,135,710
Ensembl chrNW_004936490:14,113,346...14,131,942 		JBrowse link
G Nap1l4 nucleosome assembly protein 1 like 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936794:1,074,126...1,106,613
Ensembl chrNW_004936794:1,074,128...1,106,519 		JBrowse link
G Noc2l NOC2 like nucleolar associated transcriptional repressor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:2,087,123...2,098,153
Ensembl chrNW_004936737:2,087,158...2,098,156 		JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:3,102,468...3,147,601
Ensembl chrNW_004936526:3,102,039...3,147,642 		JBrowse link
G Parp2 poly(ADP-ribose) polymerase 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936877:554,969...564,905
Ensembl chrNW_004936877:554,473...564,903 		JBrowse link
G Pwwp3a PWWP domain containing 3A, DNA repair factor enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:692,436...709,899
Ensembl chrNW_004936588:692,436...709,945 		JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:15,592,226...15,611,381
Ensembl chrNW_004936474:15,592,240...15,611,381 		JBrowse link
G Rbbp7 RB binding protein 7, chromatin remodeling factor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:6,107,754...6,133,136
Ensembl chrNW_004936470:6,104,510...6,133,185 		JBrowse link
G Rcc1 regulator of chromosome condensation 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,635,175...12,646,907
Ensembl chrNW_004936474:12,635,175...12,647,231 		JBrowse link
G Rnf168 ring finger protein 168 enables ISO (PMID:22742833) UniProt PMID:22742833 NCBI chrNW_004936784:1,073,236...1,094,575 JBrowse link
G Rnf169 ring finger protein 169 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936498:3,675,075...3,783,514
Ensembl chrNW_004936498:3,685,572...3,776,466 		JBrowse link
G Rnf4 ring finger protein 4 enables ISO PMID:11319220 UniProt PMID:11319220 RGD:8554033 NCBI chrNW_004936477:21,025,040...21,055,821 JBrowse link
G Sap30l SAP30 like enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:8,305,809...8,319,685
Ensembl chrNW_004936515:8,305,799...8,319,685 		JBrowse link
G Sirt6 sirtuin 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,387,162...2,394,066
Ensembl chrNW_004936588:2,386,977...2,394,096 		JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936479:2,030,788...2,110,501
Ensembl chrNW_004936479:2,030,716...2,110,661 		JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936535:4,857,816...4,890,266
Ensembl chrNW_004936535:4,856,672...4,890,225 		JBrowse link
G Ssrp1 structure specific recognition protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936581:5,148,108...5,157,630
Ensembl chrNW_004936581:5,148,050...5,157,667 		JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936880:511,699...545,364
Ensembl chrNW_004936880:508,244...545,369 		JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936538:4,878,645...4,910,613
Ensembl chrNW_004936538:4,878,662...4,910,597 		JBrowse link
G Znhit1 zinc finger HIT-type containing 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936543:1,098,095...1,104,731
Ensembl chrNW_004936543:1,097,588...1,105,162 		JBrowse link
promoter-enhancer loop anchoring activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahdc1 AT-hook DNA binding motif containing 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:11,824,692...11,846,355
Ensembl chrNW_004936474:11,824,697...11,876,817 		JBrowse link
G Msl2 MSL complex subunit 2 enables ISO (MGI:7579240|PMID:38030723) UniProt PMID:38030723 MGI:7579240 NCBI chrNW_004936529:9,035,198...9,068,567
Ensembl chrNW_004936529:9,033,895...9,068,567 		JBrowse link
G Pcbp2 poly(rC) binding protein 2 enables ISO (PMID:31361039) FlyBase PMID:31361039 NCBI chrNW_004936512:10,732,129...10,754,885
Ensembl chrNW_004936512:10,732,151...10,756,912 		JBrowse link
G Ruvbl2 RuvB like AAA ATPase 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:2,995,212...3,010,563
Ensembl chrNW_004936664:2,995,213...3,010,853 		JBrowse link
promoter-specific chromatin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor ISO RGD PMID:31746392 RGD:401793746 NCBI chrNW_004936546:3,737,908...3,783,492
Ensembl chrNW_004936546:3,737,851...3,783,588 		JBrowse link
G Atf2 activating transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:4,729,984...4,826,367
Ensembl chrNW_004936509:4,732,930...4,826,443 		JBrowse link
G Atf4 activating transcription factor 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,114,478...2,115,969
Ensembl chrNW_004936492:2,110,634...2,115,996 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936520:5,707,542...5,716,966
Ensembl chrNW_004936520:5,707,778...5,717,024 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:12,381,225...12,505,121
Ensembl chrNW_004936496:12,381,126...12,505,150 		JBrowse link
G Ddx5 DEAD-box helicase 5 enables ISO (MGI:5883203|PMID:24910439) UniProt PMID:24910439 MGI:5883203 NCBI chrNW_004936541:5,005,211...5,013,439
Ensembl chrNW_004936541:5,004,692...5,013,350 		JBrowse link
G Dhx9 DExH-box helicase 9 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:6,896,487...6,934,938
Ensembl chrNW_004936481:6,896,359...6,935,623 		JBrowse link
G Dnmt1 DNA methyltransferase 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:520,181...565,496
Ensembl chrNW_004936659:520,493...565,416 		JBrowse link
G E2f4 E2F transcription factor 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:17,663,887...17,670,312
Ensembl chrNW_004936475:17,663,914...17,670,302 		JBrowse link
G Egr1 early growth response 1 enables ISO
IEA		 RGD
Ensembl		 PMID:22292946 GO_REF:0000107 RGD:10395298 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749 		JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,648,451...1,663,294
Ensembl chrNW_004936727:1,648,448...1,663,455 		JBrowse link
G Ep300 E1A binding protein p300 ISO RGD PMID:21307242 RGD:7364713 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138 		JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:1,854,938...1,867,521
Ensembl chrNW_004936706:1,852,359...1,867,745 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:43,970,002...43,998,279
Ensembl chrNW_004936469:43,969,740...43,998,448 		JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:2,301,072...2,329,346
Ensembl chrNW_004936501:2,300,835...2,329,351 		JBrowse link
G Esr1 estrogen receptor 1 ISO RGD PMID:24046281 RGD:7364871 NCBI chrNW_004936489:4,616,839...4,887,179
Ensembl chrNW_004936489:4,614,754...4,887,171 		JBrowse link
G Esr2 estrogen receptor 2 ISO RGD PMID:24046281 RGD:7364871 NCBI chrNW_004936495:7,956,168...8,018,356
Ensembl chrNW_004936495:7,956,766...8,004,357 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:5,024,077...5,069,152
Ensembl chrNW_004936527:5,024,068...5,063,939 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit ISO mRNA:decreased expression:hippocampus RGD PMID:29330744 RGD:405650592 NCBI chrNW_004936488:4,384,710...4,388,118
Ensembl chrNW_004936488:4,384,705...4,388,122 		JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,642,504...3,649,294
Ensembl chrNW_004936599:3,642,504...3,648,417 		JBrowse link
G Foxc2 forkhead box C2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:2,236,224...2,238,501
Ensembl chrNW_004936641:2,236,873...2,238,375 		JBrowse link
G Foxo1 forkhead box O1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936565:5,210,014...5,299,213
Ensembl chrNW_004936565:5,210,014...5,302,436 		JBrowse link
G Foxo4 forkhead box O4 ISO RGD PMID:16054032 RGD:10402362 NCBI chrNW_004936762:495,271...501,278
Ensembl chrNW_004936762:493,910...501,531 		JBrowse link
G Gadd45a growth arrest and DNA damage inducible alpha enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936591:3,998,359...4,001,491
Ensembl chrNW_004936591:3,998,340...4,001,830 		JBrowse link
G Gli2 GLI family zinc finger 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213 		JBrowse link
G Gtf2b general transcription factor IIB enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936732:148,702...178,992
Ensembl chrNW_004936732:148,369...183,067 		JBrowse link
G Gtf2f1 general transcription factor IIF subunit 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:3,742,880...3,750,400
Ensembl chrNW_004936588:3,742,921...3,750,196 		JBrowse link
G Hdac1 histone deacetylase 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:15,320,635...15,351,418
Ensembl chrNW_004936474:15,320,729...15,350,860 		JBrowse link
G Hdac2 histone deacetylase 2 ISO RGD PMID:21586557 RGD:7241147 NCBI chrNW_004936679:2,448,676...2,474,641
Ensembl chrNW_004936679:2,448,390...2,474,641 		JBrowse link
G Hdac4 histone deacetylase 4 ISO RGD PMID:21586557 RGD:7241147 NCBI chrNW_004936745:1,730,743...1,942,071
Ensembl chrNW_004936745:1,730,694...1,942,074 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U enables ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:19632204 GO_REF:0000107 GO_REF:0000118 RGD:10059314 NCBI chrNW_004936526:6,014,745...6,022,213 JBrowse link
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:26053851 RGD:10402396 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337 		JBrowse link
G Ikzf3 IKAROS family zinc finger 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:14,939,693...15,025,728
Ensembl chrNW_004936490:14,939,776...15,025,728 		JBrowse link
G Irf3 interferon regulatory factor 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,477,750...3,482,489
Ensembl chrNW_004936664:3,475,543...3,481,533 		JBrowse link
G Isl1 ISL LIM homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:15,805,259...15,817,854
Ensembl chrNW_004936480:15,805,247...15,817,854 		JBrowse link
G Kat8 lysine acetyltransferase 8 enables ISO (MGI:6837056|PMID:23523075) UniProt PMID:23523075 MGI:6837056 NCBI chrNW_004936501:13,475,676...13,487,617
Ensembl chrNW_004936501:13,474,735...13,489,341 		JBrowse link
G Kdm1a lysine demethylase 1A enables ISO (MGI:3849640|PMID:19497860) BHF-UCL PMID:19497860 MGI:3849640 NCBI chrNW_004936474:8,262,913...8,319,089
Ensembl chrNW_004936474:8,262,885...8,319,092 		JBrowse link
G Klf4 KLF transcription factor 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936559:5,105,456...5,109,970
Ensembl chrNW_004936559:5,105,463...5,109,970 		JBrowse link
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 enables ISO (PMID:22770845) MGI PMID:22770845 NCBI chrNW_004936492:642,434...666,402
Ensembl chrNW_004936492:637,835...666,435 		JBrowse link
G LOC101971629 core histone macro-H2A.1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:2,496,489...2,556,352
Ensembl chrNW_004936597:2,495,862...2,556,603 		JBrowse link
G Mecp2 methyl-CpG binding protein 2 enables ISO
IEA		 RGD
Ensembl		 PMID:21425435 GO_REF:0000107 RGD:8552971 NCBI chrNW_004936809:902,938...967,771
Ensembl chrNW_004936809:911,764...966,839 		JBrowse link
G Med1 mediator complex subunit 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:14,625,201...14,663,184
Ensembl chrNW_004936490:14,625,897...14,657,802 		JBrowse link
G Mybl1 MYB proto-oncogene like 1 enables ISO (PMID:26624618) MGI PMID:26624618 NCBI chrNW_004936496:7,395,541...7,436,295
Ensembl chrNW_004936496:7,395,533...7,436,358 		JBrowse link
G Myod1 myogenic differentiation 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:1,407,187...1,409,683
Ensembl chrNW_004936528:1,407,661...1,409,573 		JBrowse link
G Ndn necdin, MAGE family member enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936805:849,218...850,894
Ensembl chrNW_004936805:849,345...850,322 		JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 enables ISO (PMID:25637874) MGI PMID:25637874 NCBI chrNW_004936490:13,265,269...13,279,164
Ensembl chrNW_004936490:13,266,347...13,279,206 		JBrowse link
G Nipbl NIPBL cohesin loading factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:4,870,686...5,041,099
Ensembl chrNW_004936518:4,869,546...4,969,450 		JBrowse link
G Nrl neural retina leucine zipper enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:448,006...454,064
Ensembl chrNW_004936722:447,967...454,553 		JBrowse link
G Nup98 nucleoporin 98 and 96 precursor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:1,112,724...1,219,790
Ensembl chrNW_004936498:1,112,663...1,220,634 		JBrowse link
G Pcgf1 polycomb group ring finger 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936556:719,601...722,339
Ensembl chrNW_004936556:718,615...721,908 		JBrowse link
G Pcgf2 polycomb group ring finger 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:14,139,125...14,150,377
Ensembl chrNW_004936490:14,138,980...14,150,756 		JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 ISO RGD PMID:19380737 RGD:2311163 NCBI chrNW_004936472:23,102,534...23,107,127
Ensembl chrNW_004936472:23,102,534...23,107,127 		JBrowse link
G Polr2a RNA polymerase II subunit A enables ISO (PMID:24441171) UniProt PMID:24441171 NCBI chrNW_004936595:755,585...781,692
Ensembl chrNW_004936595:755,535...781,783 		JBrowse link
G Pou4f2 POU class 4 homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:2,705,184...2,711,785
Ensembl chrNW_004936535:2,705,162...2,711,813 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma enables ISO (PMID:29519872) MGI PMID:29519872 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:19948729 RGD:10059643 NCBI chrNW_004936477:4,881,230...5,488,208
Ensembl chrNW_004936477:5,199,881...5,488,226 		JBrowse link
G Prdm1 PR/SET domain 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936564:2,594,362...2,690,680
Ensembl chrNW_004936564:2,667,660...2,690,683 		JBrowse link
G Prdm15 PR/SET domain 15 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:1,939,075...1,976,194
Ensembl chrNW_004936500:1,940,134...1,973,550 		JBrowse link
G Rbl1 RB transcriptional corepressor like 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:4,108,393...4,157,993
Ensembl chrNW_004936561:4,107,861...4,157,647 		JBrowse link
G Rbl2 RB transcriptional corepressor like 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:6,087,055...6,140,012
Ensembl chrNW_004936475:6,086,584...6,144,067 		JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 enables ISO (PMID:24623306)
(MGI:5440670|PMID:20164836)		 UniProt PMID:20164836 PMID:24623306 MGI:5440670 NCBI chrNW_004936580:1,146,286...1,192,842
Ensembl chrNW_004936580:1,146,277...1,192,842 		JBrowse link
G Sirt1 sirtuin 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215 		JBrowse link
G Smad3 SMAD family member 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793 		JBrowse link
G Sox10 SRY-box transcription factor 10 ISO RGD PMID:22037207 RGD:12859028 NCBI chrNW_004936492:3,173,770...3,183,423
Ensembl chrNW_004936492:3,173,741...3,185,024 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936506:7,196,860...7,235,854
Ensembl chrNW_004936506:7,196,797...7,233,756 		JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:2,921,987...2,971,521
Ensembl chrNW_004936538:2,921,719...2,971,552 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 enables ISO (PMID:22323595) MGI PMID:22323595 NCBI chrNW_004936762:189,710...271,759 JBrowse link
G Taf10 TATA-box binding protein associated factor 10 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936842:667,960...669,367
Ensembl chrNW_004936842:667,936...669,441 		JBrowse link
G Taf5 TATA-box binding protein associated factor 5 enables ISO (PMID:22323595) MGI PMID:22323595 NCBI chrNW_004936600:2,683,045...2,700,272
Ensembl chrNW_004936600:2,679,807...2,700,274 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO RGD PMID:21901280 RGD:152995490 NCBI chrNW_004936486:3,473,877...3,660,565
Ensembl chrNW_004936486:3,473,843...3,660,576 		JBrowse link
G Tp53 tumor protein p53 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425 		JBrowse link
G Tp63 tumor protein p63 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:492,267...705,282
Ensembl chrNW_004936578:491,507...705,729 		JBrowse link
G Trim28 tripartite motif containing 28 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004937062:126,832...132,938
Ensembl chrNW_004937062:126,708...134,366 		JBrowse link
G Trim33 tripartite motif containing 33 enables ISO (PMID:26624618) MGI PMID:26624618 NCBI chrNW_004936690:2,709,059...2,898,399
Ensembl chrNW_004936690:2,709,061...2,830,450 		JBrowse link
G Usp3 ubiquitin specific peptidase 3 ISO RGD PMID:16279867 RGD:8657120 NCBI chrNW_004936471:24,032,644...24,130,543
Ensembl chrNW_004936471:24,035,655...24,130,997 		JBrowse link
G Wdr13 WD repeat domain 13 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936721:566,529...594,203
Ensembl chrNW_004936721:566,520...574,934 		JBrowse link
G Zc3h4 zinc finger CCCH-type containing 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:832,500...872,752
Ensembl chrNW_004936664:834,684...872,162 		JBrowse link
G Znf304 zinc finger protein 304 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936897:244,051...253,580
Ensembl chrNW_004936897:243,884...254,033 		JBrowse link
G Znf609 zinc finger protein 609 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:24,880,343...25,064,895
Ensembl chrNW_004936471:24,899,154...25,063,379 		JBrowse link
G Znf683 zinc finger protein 683 enables ISO (MGI:5779429|PMID:27102484) UniProt PMID:27102484 MGI:5779429 NCBI chrNW_004936474:10,851,249...10,859,092 JBrowse link
G Znf750 zinc finger protein 750 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936923:299,725...302,741
Ensembl chrNW_004936923:299,719...307,488 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 17094
    binding 15357
      protein-containing complex binding 2009
        chromatin binding 660
          chromatin DNA binding + 120
          euchromatin binding 0
          nucleosome binding + 59
          promoter-specific chromatin binding 81
paths to the root