Fli1 (Fli-1 proto-oncogene, ETS transcription factor)

Gene: Fli1 (Fli-1 proto-oncogene, ETS transcription factor) Ictidomys tridecemlineatus

Analyze

Symbol:

Fli1

Name:

Fli-1 proto-oncogene, ETS transcription factor

RGD ID:

12480604

Description:

ENCODES a protein that exhibits chromatin binding (inferred); DNA binding (inferred); DNA-binding transcription activator activity, RNA polymerase II-specific (inferred); INVOLVED IN animal organ morphogenesis (ortholog); blood circulation (ortholog); megakaryocyte development (ortholog); ASSOCIATED WITH Chromosome 11, Partial Trisomy 11q (ortholog); Dwarfism (ortholog); Ewing sarcoma (ortholog); FOUND IN cytosol (inferred); nuclear body (inferred); nucleoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

Fli-1 proto-oncogene, ETS transcription factor, transcript variant X1; Fli-1 proto-oncogene, ETS transcription factor, transcript variant X2; Friend leukemia integration 1 transcription factor

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	110,872,609 - 111,001,492 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936572	3,448,862 - 3,577,836 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936572	3,448,870 - 3,576,406 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Chromosome 11, Partial Trisomy 11q (ISO)

Dwarfism (ISO)

Ewing sarcoma (ISO)

Experimental Liver Cirrhosis (ISO)

genetic disease (ISO)

hemorrhagic disease (ISO)

Jacobsen Syndrome (ISO)

medulloblastoma (ISO)

platelet-type bleeding disorder 15 (ISO)

Platelet-Type Bleeding Disorder 21 (ISO)

schizophrenia (ISO)

systemic scleroderma (ISO)

thrombocytopenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

animal organ morphogenesis (IEA,ISO)

blood circulation (IEA,ISO)

cell differentiation (IEA)

megakaryocyte development (IEA,ISO)

positive regulation of DNA-templated transcription (IEA)

positive regulation of transcription by RNA polymerase II (IEA)

regulation of DNA-templated transcription (IEA,ISO)

regulation of transcription by RNA polymerase II (IEA)

Cellular Component

cytosol (IEA)

nuclear body (IEA)

nucleoplasm (IEA)

nucleus (IEA)

Molecular Function

chromatin binding (IEA)

DNA binding (IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (IEA)

DNA-binding transcription factor activity (IEA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IEA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IEA)

sequence-specific DNA binding (IEA)

sequence-specific double-stranded DNA binding (IEA)

transcription cis-regulatory region binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Fli1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	110,872,609 - 111,001,492 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936572	3,448,862 - 3,577,836 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936572	3,448,870 - 3,576,406 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FLI1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	128,685,351 - 128,813,267 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	128,686,535 - 128,813,267 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	128,556,430 - 128,683,162 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	128,069,199 - 128,187,521 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	128,069,198 - 128,187,520	NCBI
Celera	11	125,728,561 - 125,849,286 (+)	NCBI		Celera
Cytogenetic Map	11	q24.3	NCBI
HuRef	11	124,504,750 - 124,631,960 (+)	NCBI		HuRef
CHM1_1	11	128,442,436 - 128,569,169 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	128,719,763 - 128,845,984 (+)	NCBI		T2T-CHM13v2.0

Fli1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	32,333,500 - 32,454,292 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	32,333,500 - 32,454,157 (-)	Ensembl		GRCm39 Ensembl
GRCm38	9	32,422,204 - 32,543,432 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	32,422,204 - 32,542,861 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	32,229,793 - 32,348,953 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	32,171,773 - 32,290,933 (-)	NCBI		MGSCv36	mm8
Celera	9	29,685,381 - 29,804,572 (-)	NCBI		Celera
Cytogenetic Map	9	A4	NCBI
cM Map	9	17.74	NCBI

Fli1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	39,089,526 - 39,209,511 (-)	NCBI		GRCr8
mRatBN7.2	8	30,831,422 - 30,950,468 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	30,832,753 - 30,950,433 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	34,903,577 - 35,021,956 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	33,197,989 - 33,316,402 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	31,060,872 - 31,179,270 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	33,541,932 - 33,661,111 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	33,543,258 - 33,661,049 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	33,586,162 - 33,704,455 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	32,187,952 - 32,309,782 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	32,196,722 - 32,318,548 (-)	NCBI
Celera	8	32,284,160 - 32,401,673 (-)	NCBI		Celera
Cytogenetic Map	8	q21	NCBI

Fli1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	29,654,459 - 29,775,903 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955412	29,653,621 - 29,773,412 (+)	NCBI	ChiLan1.0	ChiLan1.0

FLI1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	129,376,354 - 129,494,803 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	130,484,068 - 130,602,419 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	123,506,859 - 123,626,024 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	127,409,301 - 127,527,521 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	127,409,301 - 127,530,312 (+)	Ensembl	panpan1.1		panPan2

FLI1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	5,841,533 - 5,968,329 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	5,843,023 - 5,966,822 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	5,899,065 - 6,025,150 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	5,799,196 - 5,922,120 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	5,799,200 - 5,920,609 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	5,858,425 - 5,981,002 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	5,836,777 - 5,962,717 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	5,870,453 - 5,993,208 (-)	NCBI		UU_Cfam_GSD_1.0

FLI1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	55,612,901 - 55,749,778 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	55,612,905 - 55,749,784 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	61,707,515 - 61,810,415 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FLI1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	119,817,987 - 119,945,378 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	119,827,222 - 119,946,662 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666043	6,144,187 - 6,261,677 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fli1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624812	3,004,628 - 3,139,101 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624812	3,004,631 - 3,138,901 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005330742	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021730136	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040285543	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040285544	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000028306 ⟹ ENSSTOP00000017793

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936572	3,448,862 - 3,569,063 (-)	Ensembl

RefSeq Acc Id:

ENSSTOT00000038683 ⟹ ENSSTOP00000025871

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936572	3,448,862 - 3,577,836 (-)	Ensembl

RefSeq Acc Id:

XM_005330742 ⟹ XP_005330799

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	110,881,248 - 111,001,492 (+)	NCBI
SpeTri2.0	NW_004936572	3,448,870 - 3,569,106 (-)	NCBI

Sequence:

show sequence

GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAGGACTTCCTCCCCGTTCGCAAAGTGA
AGTCACTTCCCAAAATTAGCTGAAAAAAAGTTTCATCCGGTTAACTGTCTCTTTTTCGCTCCGC
TACAACAACAAACGTGCACAGGGGAGCGAGGGCAGGGCGCTCACAGGGGGCACTCAGGGAGGGC
CCAGGGCGCCAGGGAGGCCGCGCCGGGCTAATCTGAAGGGGCTGCGAGGTCAGGCTGTAACCGG
GTCAATGTGTGGAATATTGGGGGGCTCGGCTGCAGACTTGGCCAAATGGACGGGACTATTAAGG
AGGCTCTGTCGGTGGTGAGCGACGACCAGTCCCTCTTTGACTCAGCATACGGAGCGGCGGCCCA
TCTCCCCAAGGCCGACATGACCGCTTCGGGGAGTCCTGACTACGGGCAGCCCCACAAAATCAAC
CCTCTCCCACCACAACAGGAATGGATCAACCAGCCTGTGAGGGTCAACGTCAAGCGGGAGTATG
ACCACATGAATGGATCCAGGGAGTCTCCGGTGGACTGCAGCGTTAGCAAATGTAGCAAGCTTGT
AGGAGGAGGCGAGTCCAACCCTATGAACTACAACAGCTACATGGACGAGAAGAACGGCCCCCCT
CCTCCCAACATGACCACCAACGAGAGGAGAGTCATTGTGCCCGCAGACCCCACACTGTGGACGC
AGGAGCACGTGCGGCAGTGGCTAGAGTGGGCGATAAAGGAGTACGGCTTGATGGAGATTGACAC
CTCCTTTTTCCAGAACATGGATGGCAAGGAACTGTGTAAAATGAACAAGGAGGACTTCCTCCGA
GCCACCTCGCTCTACAACACGGAAGTGCTGTTGTCACACCTCAGTTACCTCAGGGAAAGTTCAC
TGTTGGCCTATAATACAACCTCCCACACAGACCAGTCCTCACGACTAAGTGTCAAAGAAGATCC
TTCTTATGACTCAGTCAGGAGAGGAGGATGGGGCAATAACATGAATTCTGGCCTCAACAAAAGT
CCTCCCCTTTCAGGGGCACAAACGATGAGTAAGAACACAGAACAGCGGCCCCAGCCAGATCCAT
ATCAGATCTTGGGCCCTACCAGTAGCCGTCTAGCCAATCCTGGAAGTGGGCAGATCCAACTGTG
GCAATTCCTCCTCGAGCTACTCTCTGATAGTGCCAACGCCAGCTGTATCACCTGGGAGGGGACC
AACGGGGAGTTCAAAATGACGGACCCCGATGAGGTGGCCAGGCGCTGGGGAGAGCGGAAAAGCA
AGCCCAACATGAATTATGACAAGCTGAGCCGGGCCCTCCGATATTACTACGATAAAAACATTAT
GACCAAAGTGCATGGCAAAAGGTATGCCTATAAATTTGACTTCCACGGCATTGCCCAGGCTCTG
CAGCCACATCCAACCGAGTCGTCCATGTACAAGTACCCTTCCGATATCCCCTACATGCCTTCCT
ACCACGCCCACCAACAGAAGGTGAACTTTGTCCCTCCCCACCCTTCCTCCATGCCTGTCACTTC
TTCCAGCTTCTTTGGAGCAGCGTCACAATACTGGACCTCTCCCACTGGTGGGATCTACCCTAAT
CCCAATGTCCCTCGTCATCCTAACACCCATGTGCCTTCACACTTAGGCAGTTACTACTAGAAGC
TTACTCATCAGTGGCCTTCTAGCTGAAGCCCCAATTCTCACTCTTCCTGGACACTTTGGACTCT
AAAGGACATAGGTGGCCTAGAAGAGAAAACAAAACTGGATGTTCTTTTTCATTGGATAGAACTT
TTGTATTTGTTCTTAAAAACATTTTTTTTTAATGTCAATAACTTTTTCTTCCTCTACCTGAACA
AAGAGATGGAACATTCCATGGGCCAGTACGCCATTTTGGATTCTCAATCTCCTATCATCATATG
AGTTGAGTATTTAGATGACTGGAATGGTTATATCATGGTTCCGAGAAAGAAGCTATAATTTTCT
TTATATTTGTGTGAGCAGAGCAGTTTCTTATCAACACACGGGTCTCATCATTGTAGAATTCAGT
ACAATAATAGATCATGGACTTAACCAGTCATGTTCTGGTTTGAGACTTAGTGAAAATAGACACA
GGAAGCTTATAATCTTTTGGGGGGGAACCTAACTCAGTGGATGGCAACTGGAACACTGGCTGTT
AGCCAGTGATGTCTTCACCCAACTGGAATTTGAAAGAAAGAACATATATGTGTGTATTTAAGAA
GCCATGGGCATTGCAAAATCCCATCCGTGGGCAGTATGTACTCACTGACCATTCTCTCTAGAAA
TAGTCAAGAATATGAACTAAGAAATTTTAATGCAAATACAGACATTCCTAAAAGACAGAGAATT
AAATAAATTTTTTTAAATGACAGTGGGTCCCAGAACTTTGAAAAGTCATAGGGATTTCTAACTT
GAACAGATTCGCAAGCGCTGTGCGTTTGTCAGACCATCAGACCAGGGTCAATCATTCAGAAGGC
AACTTACTGTATAAATTATGCAGAGTTATTTTCCTATATCTCACAGTATTAAAAAGTAAATAGA
TTAAAAAATTAAAAAGATAAATAAACGAGTTGACCTCGGTCACAAATGCAATTTTACTATCAAA
TCAGTCATTGTTATTTTTTTAATGTAATTTGTACATCTTTTGTCAATCTGTACATTTGGGCTAT
TTGTACGTTTTTATAGCTGGTTTTTAAAAAGCATAATGTGACTATTGCTGAAAAGAAAACAGGG
CGTTTAAGTCACTGATTTACTGGGAAGAGAAGCACTGGTACAGTTATTTAACAGGAATGCACAG
GCAAGAAAGGGCAATCCATTTAAATCTTTAATGCTTTGGAAACGTTTGTAAATAACAGAACTGC
AATAATCTCAACGCTAAAGAGAACAACCAAACTTTCCCTTGTGGAGACGAGGGATTTTCCTGCT
CCATATATGCAATATATTTTTTAGACATTAAAATATATATAATTTTGCAGGTAATCGTTGACTT
TTTAACTATATTAAGTGTTAAGCTGACAACTGTCAATGAAGACTATGTTGTAAAATAATTTGAC
TAAATAAATTGTGCCTTCTTCTCTCAGAA

hide sequence

RefSeq Acc Id:

XM_021730136 ⟹ XP_021585811

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	110,872,609 - 111,001,492 (+)	NCBI
SpeTri2.0	NW_004936572	3,448,870 - 3,576,406 (-)	NCBI

Sequence:

show sequence

TCGAGCTTTCTGGACCCTTTCTCAGGAACTAGGATGTTTCAGACAGTCCCTGACACATCGTCTT
ACGTCAAGGAGGCTCTGTCGGTGGTGAGCGACGACCAGTCCCTCTTTGACTCAGCATACGGAGC
GGCGGCCCATCTCCCCAAGGCCGACATGACCGCTTCGGGGAGTCCTGACTACGGGCAGCCCCAC
AAAATCAACCCTCTCCCACCACAACAGGAATGGATCAACCAGCCTGTGAGGGTCAACGTCAAGC
GGGAGTATGACCACATGAATGGATCCAGGGAGTCTCCGGTGGACTGCAGCGTTAGCAAATGTAG
CAAGCTTGTAGGAGGAGGCGAGTCCAACCCTATGAACTACAACAGCTACATGGACGAGAAGAAC
GGCCCCCCTCCTCCCAACATGACCACCAACGAGAGGAGAGTCATTGTGCCCGCAGACCCCACAC
TGTGGACGCAGGAGCACGTGCGGCAGTGGCTAGAGTGGGCGATAAAGGAGTACGGCTTGATGGA
GATTGACACCTCCTTTTTCCAGAACATGGATGGCAAGGAACTGTGTAAAATGAACAAGGAGGAC
TTCCTCCGAGCCACCTCGCTCTACAACACGGAAGTGCTGTTGTCACACCTCAGTTACCTCAGGG
AAAGTTCACTGTTGGCCTATAATACAACCTCCCACACAGACCAGTCCTCACGACTAAGTGTCAA
AGAAGATCCTTCTTATGACTCAGTCAGGAGAGGAGGATGGGGCAATAACATGAATTCTGGCCTC
AACAAAAGTCCTCCCCTTTCAGGGGCACAAACGATGAGTAAGAACACAGAACAGCGGCCCCAGC
CAGATCCATATCAGATCTTGGGCCCTACCAGTAGCCGTCTAGCCAATCCTGGAAGTGGGCAGAT
CCAACTGTGGCAATTCCTCCTCGAGCTACTCTCTGATAGTGCCAACGCCAGCTGTATCACCTGG
GAGGGGACCAACGGGGAGTTCAAAATGACGGACCCCGATGAGGTGGCCAGGCGCTGGGGAGAGC
GGAAAAGCAAGCCCAACATGAATTATGACAAGCTGAGCCGGGCCCTCCGATATTACTACGATAA
AAACATTATGACCAAAGTGCATGGCAAAAGGTATGCCTATAAATTTGACTTCCACGGCATTGCC
CAGGCTCTGCAGCCACATCCAACCGAGTCGTCCATGTACAAGTACCCTTCCGATATCCCCTACA
TGCCTTCCTACCACGCCCACCAACAGAAGGTGAACTTTGTCCCTCCCCACCCTTCCTCCATGCC
TGTCACTTCTTCCAGCTTCTTTGGAGCAGCGTCACAATACTGGACCTCTCCCACTGGTGGGATC
TACCCTAATCCCAATGTCCCTCGTCATCCTAACACCCATGTGCCTTCACACTTAGGCAGTTACT
ACTAGAAGCTTACTCATCAGTGGCCTTCTAGCTGAAGCCCCAATTCTCACTCTTCCTGGACACT
TTGGACTCTAAAGGACATAGGTGGCCTAGAAGAGAAAACAAAACTGGATGTTCTTTTTCATTGG
ATAGAACTTTTGTATTTGTTCTTAAAAACATTTTTTTTTAATGTCAATAACTTTTTCTTCCTCT
ACCTGAACAAAGAGATGGAACATTCCATGGGCCAGTACGCCATTTTGGATTCTCAATCTCCTAT
CATCATATGAGTTGAGTATTTAGATGACTGGAATGGTTATATCATGGTTCCGAGAAAGAAGCTA
TAATTTTCTTTATATTTGTGTGAGCAGAGCAGTTTCTTATCAACACACGGGTCTCATCATTGTA
GAATTCAGTACAATAATAGATCATGGACTTAACCAGTCATGTTCTGGTTTGAGACTTAGTGAAA
ATAGACACAGGAAGCTTATAATCTTTTGGGGGGGAACCTAACTCAGTGGATGGCAACTGGAACA
CTGGCTGTTAGCCAGTGATGTCTTCACCCAACTGGAATTTGAAAGAAAGAACATATATGTGTGT
ATTTAAGAAGCCATGGGCATTGCAAAATCCCATCCGTGGGCAGTATGTACTCACTGACCATTCT
CTCTAGAAATAGTCAAGAATATGAACTAAGAAATTTTAATGCAAATACAGACATTCCTAAAAGA
CAGAGAATTAAATAAATTTTTTTAAATGACAGTGGGTCCCAGAACTTTGAAAAGTCATAGGGAT
TTCTAACTTGAACAGATTCGCAAGCGCTGTGCGTTTGTCAGACCATCAGACCAGGGTCAATCAT
TCAGAAGGCAACTTACTGTATAAATTATGCAGAGTTATTTTCCTATATCTCACAGTATTAAAAA
GTAAATAGATTAAAAAATTAAAAAGATAAATAAACGAGTTGACCTCGGTCACAAATGCAATTTT
ACTATCAAATCAGTCATTGTTATTTTTTTAATGTAATTTGTACATCTTTTGTCAATCTGTACAT
TTGGGCTATTTGTACGTTTTTATAGCTGGTTTTTAAAAAGCATAATGTGACTATTGCTGAAAAG
AAAACAGGGCGTTTAAGTCACTGATTTACTGGGAAGAGAAGCACTGGTACAGTTATTTAACAGG
AATGCACAGGCAAGAAAGGGCAATCCATTTAAATCTTTAATGCTTTGGAAACGTTTGTAAATAA
CAGAACTGCAATAATCTCAACGCTAAAGAGAACAACCAAACTTTCCCTTGTGGAGACGAGGGAT
TTTCCTGCTCCATATATGCAATATATTTTTTAGACATTAAAATATATATAATTTTGCAGGTAAT
CGTTGACTTTTTAACTATATTAAGTGTTAAGCTGACAACTGTCAATGAAGACTATGTTGTAAAA
TAATTTGACTAAATAAATTGTGCCTTCTTCTCTCAGAA

hide sequence

RefSeq Acc Id:

XM_040285543 ⟹ XP_040141477

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	110,872,609 - 111,001,492 (+)	NCBI

RefSeq Acc Id:

XM_040285544 ⟹ XP_040141478

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	110,879,922 - 111,001,492 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005330799	(Get FASTA)	NCBI Sequence Viewer
	XP_021585811	(Get FASTA)	NCBI Sequence Viewer
	XP_040141477	(Get FASTA)	NCBI Sequence Viewer
	XP_040141478	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000017793.2
	ENSSTOP00000025871.1
GenBank Protein	KAG3286952	(Get FASTA)	NCBI Sequence Viewer
	KAG3286953	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005330799 ⟸ XM_005330742
- Peptide Label:	isoform X3
- UniProtKB:	I3N097 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDGTIKEALSVVSDDQSLFDSAYGAAAHLPKADMTASGSPDYGQPHKINPLPPQQEWINQPVRV NVKREYDHMNGSRESPVDCSVSKCSKLVGGGESNPMNYNSYMDEKNGPPPPNMTTNERRVIVPA DPTLWTQEHVRQWLEWAIKEYGLMEIDTSFFQNMDGKELCKMNKEDFLRATSLYNTEVLLSHLS YLRESSLLAYNTTSHTDQSSRLSVKEDPSYDSVRRGGWGNNMNSGLNKSPPLSGAQTMSKNTEQ RPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARR WGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSD IPYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASQYWTSPTGGIYPNPNVPRHPNTHVPSHL GSYY hide sequence

RefSeq Acc Id:	XP_021585811 ⟸ XM_021730136
- Peptide Label:	isoform X2
- UniProtKB:	A0A287CX65 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFQTVPDTSSYVKEALSVVSDDQSLFDSAYGAAAHLPKADMTASGSPDYGQPHKINPLPPQQEW INQPVRVNVKREYDHMNGSRESPVDCSVSKCSKLVGGGESNPMNYNSYMDEKNGPPPPNMTTNE RRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTSFFQNMDGKELCKMNKEDFLRATSLYNTE VLLSHLSYLRESSLLAYNTTSHTDQSSRLSVKEDPSYDSVRRGGWGNNMNSGLNKSPPLSGAQT MSKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTD PDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESS MYKYPSDIPYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASQYWTSPTGGIYPNPNVPRHPN THVPSHLGSYY hide sequence

RefSeq Acc Id:	XP_040141477 ⟸ XM_040285543
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_040141478 ⟸ XM_040285544
- Peptide Label:	isoform X4

RefSeq Acc Id:

ENSSTOP00000017793 ⟸ ENSSTOT00000028306

RefSeq Acc Id:

ENSSTOP00000025871 ⟸ ENSSTOT00000038683

Protein Domains

ETS PNT

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000027452	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000028306.2	UniProtKB/TrEMBL
	ENSSTOT00000038683.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.10.10	UniProtKB/TrEMBL
	1.10.150.50	UniProtKB/TrEMBL
InterPro	Ets_dom	UniProtKB/TrEMBL
	ETS_fam	UniProtKB/TrEMBL
	Pointed_dom	UniProtKB/TrEMBL
	SAM/pointed_sf	UniProtKB/TrEMBL
	SAM_PNT-FLI-1	UniProtKB/TrEMBL
	WH-like_DNA-bd_sf	UniProtKB/TrEMBL
	WH_DNA-bd_sf	UniProtKB/TrEMBL
NCBI Gene	Fli1	ENTREZGENE
PANTHER	PTHR11849	UniProtKB/TrEMBL
	PTHR11849:SF161	UniProtKB/TrEMBL
Pfam	Ets	UniProtKB/TrEMBL
	SAM_PNT	UniProtKB/TrEMBL
PRINTS	ETSDOMAIN	UniProtKB/TrEMBL
PROSITE	ETS_DOMAIN_1	UniProtKB/TrEMBL
	ETS_DOMAIN_2	UniProtKB/TrEMBL
	ETS_DOMAIN_3	UniProtKB/TrEMBL
	PNT	UniProtKB/TrEMBL
SMART	ETS	UniProtKB/TrEMBL
	SAM_PNT	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46785	UniProtKB/TrEMBL
	SSF47769	UniProtKB/TrEMBL
UniProt	A0A287CX65	ENTREZGENE, UniProtKB/TrEMBL
	I3N097	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM