ONTOLOGY REPORT - ANNOTATIONS
Term: notochord development
Accession: GO:0030903
browse the term
Definition: The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column.
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Cobl
cordon-bleu WH2 repeat protein
involved_in
ISO IEA
(MGI:76306|PMID:7586755) GO_REF:0000107
RGD Ensembl
PMID:7586755
GO_REF:0000107 MGI:76306
NCBI chr14:86,828,137...87,060,682
Ensembl chr14:86,828,139...87,060,800
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Col18a1
collagen type XVIII alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593
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Col27a1
collagen type XXVII alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:76,647,302...76,765,989
Ensembl chr 5:76,647,429...76,765,174
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Col2a1
collagen type II alpha 1 chain
involved_in
ISO IBA IEA
(MGI:86312|PMID:9119111) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:9119111
GO_REF:0000033 GO_REF:0000107 MGI:86312
NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546
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Gdf3
growth differentiation factor 3
acts_upstream_of_or_within
ISO
MGI:3612535 (PMID:16368929)
RGD
PMID:16368929
NCBI chr 4:155,831,572...155,835,953
Ensembl chr 4:155,830,909...155,835,937
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Id3
inhibitor of DNA binding 3
involved_in
ISO
(MGI:73693|PMID:7655079)
RGD
PMID:7655079
MGI:73693
NCBI chr 5:148,372,784...148,374,353
Ensembl chr 5:148,372,762...148,374,349
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Nckap1
NCK-associated protein 1
acts_upstream_of_or_within
ISO
MGI:3578145 (PMID:16831833)
RGD
PMID:16831833
NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217
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Noto
notochord homeobox
acts_upstream_of_or_within
ISO
MGI:1857063|MGI:3053092 (PMID:13837681), (PMID:15231714), (PMID:15550757), (PMID:17884984), (PMID:20197654), (PMID:8155581)
RGD
PMID:8155581 PMID:13837681 PMID:15231714 PMID:15550757 PMID:17884984 PMID:20197654 More...
NCBI chr 4:117,961,163...117,965,402
Ensembl chr 4:117,961,163...117,965,402
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Sox9
SRY-box transcription factor 9
involved_in
ISO
(MGI:86312|PMID:9119111)
RGD
PMID:9119111
MGI:86312
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
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Stil
STIL, centriolar assembly protein
acts_upstream_of_or_within
ISO
MGI:2152962 (PMID:10385121)
RGD
PMID:10385121
NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730
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Tbxt
T-box transcription factor T
acts_upstream_of_or_within
ISO
MGI:1856185|MGI:1857760|MGI:3042264 (PMID:15384171), (PMID:8155581), (PMID:8293872)
RGD
PMID:8155581 PMID:8293872 PMID:15384171
NCBI chr 1:52,298,104...52,309,813
Ensembl chr 1:52,298,099...52,305,864
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Tead1
TEA domain transcription factor 1
acts_upstream_of_or_within
ISO
MGI:103262|MGI:104904 (PMID:18332127)
RGD
PMID:18332127
NCBI chr 1:166,791,900...167,010,591
Ensembl chr 1:166,792,628...167,003,369
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Tead2
TEA domain transcription factor 2
acts_upstream_of_or_within
ISO
MGI:101876|MGI:103262 (PMID:18332127)
RGD
PMID:18332127
NCBI chr 1:95,702,366...95,719,186
Ensembl chr 1:95,703,005...95,719,186
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Yap1
Yes1 associated transcriptional regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:101876|MGI:104904 (PMID:18332127)
Ensembl RGD
PMID:18332127
GO_REF:0000107
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
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Epha2
Eph receptor A2
acts_upstream_of_or_within
ISO
MGI:2448472 (PMID:11287184)
RGD
PMID:11287184
NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117
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Crb2
crumbs cell polarity complex component 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5296388|PMID:22072575)
CAFA RGD
PMID:22072575
GO_REF:0000024 MGI:5296388
NCBI chr 3:21,542,138...21,564,876
Ensembl chr 3:21,542,221...21,563,294
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Efna1
ephrin A1
acts_upstream_of_or_within
ISO
MGI:95278 (PMID:11287184)
RGD
PMID:11287184
NCBI chr 2:174,681,676...174,689,061
Ensembl chr 2:174,681,682...174,690,866
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Epha2
Eph receptor A2
acts_upstream_of_or_within
ISO
MGI:103236|MGI:2448472 (PMID:11287184)
RGD
PMID:11287184
NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117
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Tbxt
T-box transcription factor T
acts_upstream_of_or_within
ISO
MGI:1856184 (PMID:7589801)
RGD
PMID:7589801
NCBI chr 1:52,298,104...52,309,813
Ensembl chr 1:52,298,099...52,305,864
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Epha2
Eph receptor A2
acts_upstream_of_or_within
ISO
MGI:2448472 (PMID:11287184)
RGD
PMID:11287184
NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117
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Kdm6a
lysine demethylase 6A
acts_upstream_of_or_within
ISO
MGI:5448825 (PMID:22949634)
RGD
PMID:22949634
NCBI chr X:4,337,466...4,477,100
Ensembl chr X:4,337,750...4,477,062
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Nckap1
NCK-associated protein 1
acts_upstream_of_or_within
ISO
MGI:3578145 (PMID:16831833)
RGD
PMID:16831833
NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217
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Nog
noggin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:16916379)
Ensembl RGD
PMID:16916379
GO_REF:0000107
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
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Ppp1r35
protein phosphatase 1, regulatory subunit 35
involved_in
ISO
(MGI:6442352|PMID:32628936)
RGD
PMID:32628936
MGI:6442352
NCBI chr12:18,915,909...18,919,253
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Wnt11
Wnt family member 11
acts_upstream_of_or_within
ISO
MGI:98958 (PMID:25813538)
RGD
PMID:25813538
NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
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Wnt5a
Wnt family member 5A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:101948 (PMID:25813538)
Ensembl RGD
PMID:25813538
GO_REF:0000107
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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Gli1
GLI family zinc finger 1
acts_upstream_of_or_within
ISO
MGI:95728 (PMID:10725236)
RGD
PMID:10725236
NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251
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Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:95727 (PMID:10725236)
RGD
PMID:10725236
NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
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