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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of lipoprotein particle clearance
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Accession:GO:0010984 term browser browse the term
Definition:Any process that modulates the rate, frequency, or extent of lipoprotein particle clearance. Lipoprotein particle clearance is the process in which a lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.


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negative regulation of high-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc3 apolipoprotein C-III involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:46,144,348...46,146,934
Ensembl chr 9:46,144,231...46,146,934 		JBrowse link
G Mir185 microRNA 185 involved_in ISO (PMID:23459944) BHF-UCL PMID:23459944 NCBI chr16:18,145,265...18,145,329
Ensembl chr16:18,145,265...18,145,329 		JBrowse link
G Mir223 microRNA 223 involved_in ISO (PMID:23459944) BHF-UCL PMID:23459944 NCBI chr  X:95,286,423...95,286,532
Ensembl chr  X:95,286,423...95,286,532 		JBrowse link
G Mir96 microRNA 96 involved_in ISO (PMID:23459944) BHF-UCL PMID:23459944 NCBI chr 6:30,169,445...30,169,550
Ensembl chr 6:30,169,445...30,169,550 		JBrowse link
negative regulation of low-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP-binding cassette, sub-family C member 8 involved_in ISO RGD
MGI		 PMID:23828271 GO_REF:0000096 MGI:4417868 RGD:12792253 NCBI chr 7:45,753,952...45,829,441
Ensembl chr 7:45,753,947...45,829,457 		JBrowse link
G Apoc3 apolipoprotein C-III involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:46,144,348...46,146,934
Ensembl chr 9:46,144,231...46,146,934 		JBrowse link
G Csk c-src tyrosine kinase involved_in ISO RGD
MGI		 PMID:10884975 GO_REF:0000096 MGI:4417868 RGD:5134370 NCBI chr 9:57,533,929...57,560,758
Ensembl chr 9:57,533,929...57,560,914 		JBrowse link
G Il19 interleukin 19 involved_in IMP (MGI:6102526|PMID:28257760) BHF-UCL PMID:28257760 MGI:6102526 NCBI chr 1:130,860,393...130,873,194
Ensembl chr 1:130,860,393...130,867,852 		JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:57,328,049...57,338,507
Ensembl chr17:57,328,051...57,338,522 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:21,634,872...21,661,215
Ensembl chr 9:21,634,779...21,661,215 		JBrowse link
G Mir133a-1 microRNA 133a-1 involved_in ISO (PMID:28257760) BHF-UCL PMID:28257760 NCBI chr18:10,782,909...10,782,976
Ensembl chr18:10,782,909...10,782,976 		JBrowse link
G Mir133a-2 microRNA 133a-2 involved_in ISO (PMID:28257760) BHF-UCL PMID:28257760 NCBI chr 2:180,040,172...180,040,275
Ensembl chr 2:180,040,172...180,040,275 		JBrowse link
G Mir148a microRNA 148a involved_in ISO (PMID:26437365) BHF-UCL PMID:26437365 NCBI chr 6:51,246,792...51,246,890
Ensembl chr 6:51,246,792...51,246,890 		JBrowse link
G Mir17 microRNA 17 involved_in ISO (PMID:23285084) ARUK-UCL PMID:23285084 NCBI chr14:115,281,103...115,281,186
Ensembl chr14:115,281,103...115,281,186 		JBrowse link
G Mir185 microRNA 185 acts_upstream_of
involved_in		 ISO (PMID:24296663)
(PMID:26523989)		 BHF-UCL PMID:24296663 PMID:26523989 NCBI chr16:18,145,265...18,145,329
Ensembl chr16:18,145,265...18,145,329 		JBrowse link
G Mir199a-1 microRNA 199a-1 involved_in ISO (PMID:26163491) BHF-UCL PMID:26163491 NCBI chr 9:21,407,791...21,407,860
Ensembl chr 9:21,407,791...21,407,860 		JBrowse link
G Mir199a-2 microRNA 199a-2 involved_in ISO (PMID:26163491) BHF-UCL PMID:26163491 NCBI chr 1:162,045,383...162,045,492
Ensembl chr 1:162,045,383...162,045,492 		JBrowse link
G Mir27a microRNA 27a involved_in ISO (PMID:26318398) BHF-UCL PMID:26318398 NCBI chr 8:84,935,301...84,935,387
Ensembl chr 8:84,935,301...84,935,387 		JBrowse link
G Mir27b microRNA 27b involved_in ISO (PMID:26520906) BHF-UCL PMID:26520906 NCBI chr13:63,448,526...63,448,598
Ensembl chr13:63,448,526...63,448,598 		JBrowse link
G Mylip myosin regulatory light chain interacting protein involved_in IDA (MGI:3849777|PMID:19520913) BHF-UCL PMID:19520913 MGI:3849777 NCBI chr13:45,543,197...45,565,498
Ensembl chr13:45,543,218...45,565,498 		JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:106,299,531...106,321,522
Ensembl chr 4:106,299,526...106,321,526 		JBrowse link
negative regulation of very-low-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C-I involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:19,423,405...19,426,584
Ensembl chr 7:19,423,406...19,426,585 		JBrowse link
G Apoc2 apolipoprotein C2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:19,405,504...19,411,866
Ensembl chr 7:19,405,504...19,411,866 		JBrowse link
G Apoc2l apolipoprotein C2 like involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:19,405,504...19,415,385
Ensembl chr 7:19,405,509...19,415,348 		JBrowse link
G Apoc3 apolipoprotein C-III involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:46,144,348...46,146,934
Ensembl chr 9:46,144,231...46,146,934 		JBrowse link
G Lrpap1 low density lipoprotein receptor-related protein associated protein 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:35,248,834...35,263,043
Ensembl chr 5:35,248,845...35,263,110 		JBrowse link
positive regulation of chylomicron remnant clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpihbp1 GPI-anchored HDL-binding protein 1 involved_in IMP (MGI:3770110|PMID:17403372) BHF-UCL PMID:17403372 MGI:3770110 NCBI chr15:75,468,479...75,470,062
Ensembl chr15:75,468,477...75,471,330 		JBrowse link
positive regulation of high-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in IMP (MGI:3617276|PMID:16219662) UniProt PMID:16219662 MGI:3617276 NCBI chr13:25,127,135...25,175,919
Ensembl chr13:25,127,135...25,176,484 		JBrowse link
G Lipg lipase, endothelial involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:75,072,393...75,095,380
Ensembl chr18:75,072,393...75,094,334 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IMP (MGI:6342648|PMID:31257031) ARUK-UCL PMID:31257031 MGI:6342648 NCBI chr17:48,653,429...48,659,304
Ensembl chr17:48,653,429...48,661,175 		JBrowse link
positive regulation of low-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in IMP (MGI:5446858|PMID:22848640) BHF-UCL PMID:22848640 MGI:5446858 NCBI chr 9:69,360,978...69,399,074
Ensembl chr 9:69,360,902...69,399,077 		JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:134,468,865...134,495,342
Ensembl chr 4:134,468,865...134,495,335 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IMP (MGI:6342648|PMID:31257031) ARUK-UCL PMID:31257031 MGI:6342648 NCBI chr17:48,653,429...48,659,304
Ensembl chr17:48,653,429...48,661,175 		JBrowse link
regulation of chylomicron remnant clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ces1g carboxylesterase 1G acts_upstream_of_or_within IMP (PMID:23145182) MGI PMID:23145182 NCBI chr 8:94,028,997...94,063,837
Ensembl chr 8:94,028,997...94,063,936 		JBrowse link
regulation of low-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnpy2 canopy FGF signaling regulator 2 acts_upstream_of IMP (MGI:5427047|PMID:22378787) BHF-UCL PMID:22378787 MGI:5427047 NCBI chr10:128,157,972...128,163,056
Ensembl chr10:128,158,328...128,163,422 		JBrowse link
G Crp C-reactive protein, pentraxin-related involved_in ISO RGD
MGI		 PMID:8305421 GO_REF:0000096 MGI:4417868 RGD:9586002 NCBI chr 1:172,525,623...172,527,533
Ensembl chr 1:172,525,622...172,660,598 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K acts_upstream_of ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:58,538,946...58,551,157
Ensembl chr13:58,538,956...58,551,157 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:89,290,096...89,369,484
Ensembl chr10:89,290,096...89,369,447 		JBrowse link
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