Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of plasma lipoprotein particle levels
go back to main search page
Accession:GO:0097006 term browser browse the term
Definition:Any process involved in the maintenance of internal levels of plasma lipoprotein particles within an organism.
Synonyms:narrow_synonym: plasma lipoprotein particle homeostasis


show annotations for term's descendants           Sort by:
 
regulation of plasma lipoprotein particle levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E ISO (MGI:5517507|PMID:23741427) RGD PMID:23741427 MGI:5517507 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Commd1 copper metabolism domain containing 1 ISO MGI:2176228|MGI:5315712 (MGI:5806548|PMID:26965651) RGD PMID:26965651 MGI:5806548 NCBI chr14:107,664,321...107,759,974
Ensembl chr14:107,664,255...107,760,191
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 ISO (MGI:3778742|PMID:18252207) RGD PMID:18252207 MGI:3778742 NCBI chr 1:164,113,459...164,143,818
Ensembl chr 1:164,113,459...164,143,818
JBrowse link
G Lipc lipase C, hepatic type IMP RGD PMID:9822677 RGD:2307451 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248
JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 ISO (MGI:5467204|PMID:22511767) RGD PMID:22511767 MGI:5467204 NCBI chr 4:157,181,722...157,222,997
Ensembl chr 4:157,181,795...157,222,996
JBrowse link
chylomicron assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat3 lysophosphatidylcholine acyltransferase 3 ISS
ISO
GO_REF:0000024
(MGI:5780634|PMID:26833026)
UniProt
RGD
PMID:26833026 GO_REF:0000024, MGI:5780634 NCBI chr 4:157,181,722...157,222,997
Ensembl chr 4:157,181,795...157,222,996
JBrowse link
G Plagl2 PLAG1 like zinc finger 2 ISO MGI:3771822 (MGI:3771409|PMID:17983586) RGD PMID:17983586 MGI:3771409 NCBI chr 3:148,709,564...148,722,777
Ensembl chr 3:148,709,531...148,722,742
JBrowse link
chylomicron remnant clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 ISO (PMID:4020294) RGD PMID:4020294 NCBI chr 1:80,606,638...80,609,921
Ensembl chr 1:80,606,638...80,609,921
JBrowse link
G Apoc2 apolipoprotein C2 ISO
IBA
(PMID:4020294)
PMID:21873635
RGD PMID:4020294, PMID:21873635 RGD:13792537 NCBI chr 1:80,589,023...80,593,991
Ensembl chr 1:80,589,023...80,594,136
JBrowse link
G Apoc3 apolipoprotein C3 ISO
IEA
(PMID:4020294)
GO_REF:0000107
RGD
Ensembl
PMID:4020294 GO_REF:0000107 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498
JBrowse link
G Apoe apolipoprotein E IEA
ISO
ISS
GO_REF:0000107
(PMID:1911868), (PMID:7175379)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:1911868, PMID:7175379 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Lipc lipase C, hepatic type IDA RGD PMID:8192680 RGD:2308768 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248
JBrowse link
G Lmf1 lipase maturation factor 1 ISO MGI:1856820 (MGI:55554|PMID:6857276) RGD PMID:6857276 MGI:55554 NCBI chr10:14,945,185...15,031,855
Ensembl chr10:14,945,265...15,031,942
JBrowse link
chylomicron remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lipc lipase C, hepatic type IDA RGD PMID:7897313 RGD:2308767 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248
JBrowse link
G Lpl lipoprotein lipase ISS
ISO
GO_REF:0000024
(PMID:11342582)
UniProt
RGD
PMID:11342582 GO_REF:0000024 NCBI chr16:22,537,687...22,561,487
Ensembl chr16:22,537,056...22,561,496
JBrowse link
high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (PMID:10431236), (PMID:14754908), (PMID:17305370) RGD PMID:10431236, PMID:14754908, PMID:17305370 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 ISO
IEA
ISS
(PMID:14570867)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
Alzheimers_University_of_Toronto
PMID:14570867 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:12,742,433...12,762,423
Ensembl chr 7:12,742,433...12,762,341
JBrowse link
G Apoa1 apolipoprotein A1 ISO
IBA
(PMID:190223)
PMID:21873635
RGD PMID:190223, PMID:21873635 RGD:13792537 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoa2 apolipoprotein A2 ISO
IBA
(PMID:218942)
PMID:21873635
RGD PMID:218942, PMID:21873635 RGD:13792537 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoa4 apolipoprotein A4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376
JBrowse link
G Apoa5 apolipoprotein A5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:50,559,079...50,561,720
Ensembl chr 8:50,559,126...50,561,736
JBrowse link
G Apoe apolipoprotein E IEA
ISO
ISS
GO_REF:0000107
(PMID:14754908), (PMID:17305370)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:14754908, PMID:17305370 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Apom apolipoprotein M IBA
ISO
PMID:21873635
(MGI:3575626|PMID:15793583)
RGD PMID:15793583, PMID:21873635 MGI:3575626, RGD:13792537 NCBI chr20:5,120,473...5,123,073
Ensembl chr20:5,120,474...5,123,073
JBrowse link
high-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa2 apolipoprotein A2 ISO (PMID:10764676) RGD PMID:10764676 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoc2 apolipoprotein C2 ISO
IBA
(PMID:15778093)
PMID:21873635
RGD PMID:15778093, PMID:21873635 RGD:13792537 NCBI chr 1:80,589,023...80,593,991
Ensembl chr 1:80,589,023...80,594,136
JBrowse link
G Apoe apolipoprotein E ISO
IEA
(PMID:210175)
GO_REF:0000107
RGD
Ensembl
PMID:210175 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Apom apolipoprotein M IBA
ISO
PMID:21873635
(MGI:3575626|PMID:15793583)
RGD PMID:15793583, PMID:21873635 MGI:3575626, RGD:13792537 NCBI chr20:5,120,473...5,123,073
Ensembl chr20:5,120,474...5,123,073
JBrowse link
G Ldlr low density lipoprotein receptor IEA
ISO
GO_REF:0000107
RNAcentral:URS0000070CD2_10090 (MGI:5896906|PMID:25524771)
Ensembl
RGD
PMID:25524771 GO_REF:0000107, MGI:5896906 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Scarb1 scavenger receptor class B, member 1 ISO
ISS
(PMID:9211901)
GO_REF:0000024
RGD
BHF-UCL
PMID:9211901 GO_REF:0000024 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
high-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca5 ATP binding cassette subfamily A member 5 IEA
ISO
GO_REF:0000107
(MGI:4454250|PMID:20382126)
Ensembl
RGD
PMID:20382126 GO_REF:0000107, MGI:4454250 NCBI chr10:98,573,226...98,645,028
Ensembl chr10:98,576,039...98,644,938
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 ISO (MGI:3852307|PMID:16556852), (MGI:5634884|PMID:21481393) RGD PMID:16556852, PMID:21481393 MGI:3852307, MGI:5634884 NCBI chr20:9,743,269...9,842,735
Ensembl chr20:9,743,269...9,840,489
JBrowse link
G Apoa1 apolipoprotein A1 ISO (PMID:21481393) RGD PMID:21481393 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoa2 apolipoprotein A2 ISO
IBA
(PMID:14967812), (PMID:8106353)
PMID:21873635
RGD PMID:8106353, PMID:14967812, PMID:21873635 RGD:13792537 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoc3 apolipoprotein C3 ISO
IEA
(PMID:17438339)
GO_REF:0000107
RGD
Ensembl
PMID:17438339 GO_REF:0000107 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498
JBrowse link
G Apoe apolipoprotein E ISO
IEA
UniProtKB:P08226 (PMID:12401887)
GO_REF:0000107
RGD
Ensembl
PMID:12401887 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Apom apolipoprotein M ISO
IBA
(PMID:18006500)
(MGI:3575626|PMID:15793583)
PMID:21873635
RGD PMID:15793583, PMID:18006500, PMID:21873635 MGI:3575626, RGD:13792537 NCBI chr20:5,120,473...5,123,073
Ensembl chr20:5,120,474...5,123,073
JBrowse link
G Lcat lecithin cholesterol acyltransferase ISO (PMID:10722751), (PMID:12167653), (PMID:15210842), (PMID:4335615) RGD PMID:4335615, PMID:10722751, PMID:12167653, PMID:15210842 NCBI chr19:37,913,333...37,916,799
Ensembl chr19:37,913,336...37,916,813
JBrowse link
G Lipc lipase C, hepatic type IDA
IEA
ISO
GO_REF:0000107
(PMID:3244012)
Ensembl
RGD
PMID:3244012, PMID:8157689 GO_REF:0000107, RGD:2308770 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248
JBrowse link
G Lipg lipase G, endothelial type ISO (PMID:19136670) RGD PMID:19136670 NCBI chr18:70,903,528...70,924,434
Ensembl chr18:70,901,710...70,924,708
JBrowse link
G Pla2g3 phospholipase A2, group III ISO (PMID:18801741) RGD PMID:18801741 NCBI chr14:83,724,828...83,730,614
Ensembl chr14:83,724,933...83,730,614
JBrowse link
G Pltp phospholipid transfer protein IBA
ISO
PMID:21873635
(PMID:24369175), (PMID:29883800), (PMID:9132017)
RGD PMID:9132017, PMID:24369175, PMID:29883800, PMID:21873635 RGD:13792537 NCBI chr 3:161,304,469...161,322,289
Ensembl chr 3:161,304,469...161,322,289
JBrowse link
G Scarb1 scavenger receptor class B, member 1 ISO (MGI:3056693|PMID:15210842), (MGI:5634884|PMID:21481393) RGD PMID:15210842, PMID:21481393 MGI:3056693, MGI:5634884 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
intermediate-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E ISS
ISO
IEA
GO_REF:0000024
(PMID:1917954)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:1917954 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
low-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing ISO
ISS
(PMID:11222466)
GO_REF:0000024
RGD
UniProt
PMID:11222466 GO_REF:0000024 NCBI chr11:81,330,845...81,344,488
Ensembl chr11:81,330,293...81,344,488
JBrowse link
G Apob apolipoprotein B ISO (PMID:15797858), (PMID:2563166) RGD PMID:2563166, PMID:15797858 NCBI chr 6:33,176,826...33,216,381
Ensembl chr 6:33,176,778...33,224,997
JBrowse link
G Cd36 CD36 molecule ISO (PMID:10772654)
(MGI:3836139|PMID:10772654)
RGD PMID:10772654 MGI:3836139 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Commd1 copper metabolism domain containing 1 ISO MGI:2176228|MGI:5315712 (MGI:5806548|PMID:26965651) RGD PMID:26965651 MGI:5806548 NCBI chr14:107,664,321...107,759,974
Ensembl chr14:107,664,255...107,760,191
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 ISO (MGI:3784112|PMID:18175806) RGD PMID:18175806 MGI:3784112 NCBI chr 1:164,113,459...164,143,818
Ensembl chr 1:164,113,459...164,143,818
JBrowse link
G Ehd1 EH-domain containing 1 ISO (MGI:3711403|PMID:17451652) RGD PMID:17451652 MGI:3711403 NCBI chr 1:221,644,867...221,667,242
Ensembl chr 1:221,644,867...221,667,239
JBrowse link
G Ldlr low density lipoprotein receptor IEA
ISO
GO_REF:0000107
(MGI:3784112|PMID:18175806), (MGI:5806548|PMID:26965651)
(PMID:17142622), (PMID:6299582)
Ensembl
RGD
PMID:6299582, PMID:17142622, PMID:18175806, PMID:26965651 GO_REF:0000107, MGI:3784112, MGI:5806548 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 ISO (PMID:12417523), (PMID:12464675), (PMID:15166224) RGD PMID:12417523, PMID:12464675, PMID:15166224 NCBI chr 5:152,964,294...152,987,286
Ensembl chr 5:152,966,591...152,987,211
JBrowse link
G Lipc lipase C, hepatic type IDA RGD PMID:8071607 RGD:2308769 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248
JBrowse link
G Scarb1 scavenger receptor class B, member 1 ISO (MGI:3784112|PMID:18175806) RGD PMID:18175806 MGI:3784112 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
G Washc1 WASH complex subunit 1 IEA
ISO
GO_REF:0000107
(MGI:5806548|PMID:26965651)
Ensembl
RGD
PMID:26965651 GO_REF:0000107, MGI:5806548 NCBI chr 9:113,918,914...113,936,861
Ensembl chr 9:113,918,858...113,936,860
JBrowse link
low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg1 ATP binding cassette subfamily G member 1 ISO (MGI:3852307|PMID:16556852) RGD PMID:16556852 MGI:3852307 NCBI chr20:9,743,269...9,842,735
Ensembl chr20:9,743,269...9,840,489
JBrowse link
G Apoa2 apolipoprotein A2 ISO
IBA
(PMID:8106353)
PMID:21873635
RGD PMID:8106353, PMID:21873635 RGD:13792537 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apob apolipoprotein B ISO (PMID:15797858) RGD PMID:15797858 NCBI chr 6:33,176,826...33,216,381
Ensembl chr 6:33,176,778...33,224,997
JBrowse link
G Apoe apolipoprotein E ISO (MGI:3850619|PMID:15654758) RGD PMID:15654758 MGI:3850619 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Lipc lipase C, hepatic type IDA
IEA
ISO
GO_REF:0000107
PMID:9685400
(PMID:3244012)
Ensembl
RGD
PMID:3244012, PMID:8071607, PMID:9685400 GO_REF:0000107, RGD:2308769, RGD:2308763 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248
JBrowse link
G Mpo myeloperoxidase ISO (PMID:10772654) RGD PMID:10772654 NCBI chr10:75,087,892...75,098,260
Ensembl chr10:75,087,892...75,098,260
JBrowse link
G Mttp microsomal triglyceride transfer protein ISO (MGI:6095248|PMID:27471003) RGD PMID:27471003 MGI:6095248 NCBI chr 2:243,366,181...243,407,608
Ensembl chr 2:243,366,181...243,407,608
JBrowse link
G Pla2g10 phospholipase A2, group X ISO
IEA
(PMID:12021277)
GO_REF:0000107
RGD
Ensembl
PMID:12021277 GO_REF:0000107 NCBI chr10:1,509,732...1,520,970
Ensembl chr10:1,509,732...1,520,970
JBrowse link
G Pla2g12b phospholipase A2, group XIIB ISO (MGI:6095248|PMID:27471003) RGD PMID:27471003 MGI:6095248 NCBI chr20:28,989,440...29,007,967
Ensembl chr20:28,989,491...29,007,968
JBrowse link
G Pla2g2e phospholipase A2, group IIE ISO MGI:5660236 (MGI:5605113|PMID:24910243) RGD PMID:24910243 MGI:5605113 NCBI chr 5:157,327,657...157,333,039
Ensembl chr 5:157,327,657...157,333,039
JBrowse link
G Pla2g3 phospholipase A2, group III ISO (PMID:18801741) RGD PMID:18801741 NCBI chr14:83,724,828...83,730,614
Ensembl chr14:83,724,933...83,730,614
JBrowse link
G Pla2g5 phospholipase A2, group V ISS
ISO
GO_REF:0000024
MGI:3042209 (MGI:5605113|PMID:24910243), (MGI:6393145|PMID:14962950)
UniProt
RGD
PMID:14962950, PMID:24910243 GO_REF:0000024, MGI:5605113, MGI:6393145 NCBI chr 5:157,247,601...157,268,968
Ensembl chr 5:157,247,781...157,268,903
JBrowse link
G Pla2g7 phospholipase A2 group VII ISO (PMID:8624782) RGD PMID:8624782 NCBI chr 9:19,935,754...19,978,013
Ensembl chr 9:19,935,768...19,978,013
JBrowse link
negative regulation of high-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc3 apolipoprotein C3 ISO
IBA
IEA
(PMID:15778093)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:15778093, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498
JBrowse link
negative regulation of low-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 IMP RGD PMID:23828271 RGD:12792253 NCBI chr 1:102,110,708...102,191,287
Ensembl chr 1:102,110,708...102,191,287
JBrowse link
G Apoc3 apolipoprotein C3 ISO
IBA
IEA
(PMID:15778093)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:15778093, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498
JBrowse link
G Csk C-terminal Src kinase IDA RGD PMID:10884975 RGD:5134370 NCBI chr 8:62,405,714...62,424,707
Ensembl chr 8:62,405,715...62,424,303
JBrowse link
G Il19 interleukin 19 ISO (MGI:6102526|PMID:28257760) RGD PMID:28257760 MGI:6102526 NCBI chr13:47,663,592...47,677,869
Ensembl chr13:47,664,080...47,670,407
JBrowse link
G Khsrp KH-type splicing regulatory protein IEA
ISO
GO_REF:0000107
RNAcentral:URS00004176D4_9606 (PMID:26523989)
Ensembl
RGD
PMID:26523989 GO_REF:0000107 NCBI chr 9:10,013,795...10,023,670
Ensembl chr 9:10,013,854...10,022,924
JBrowse link
G Mylip myosin regulatory light chain interacting protein ISO (MGI:3849777|PMID:19520913) RGD PMID:19520913 MGI:3849777 NCBI chr17:19,682,040...19,703,681
Ensembl chr17:19,682,040...19,703,681
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 ISO (PMID:17328821), (PMID:22848640) RGD PMID:17328821, PMID:22848640 NCBI chr 5:126,031,368...126,053,726
Ensembl chr 5:126,031,368...126,053,726
JBrowse link
negative regulation of plasma lipoprotein oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa4 apolipoprotein A4 ISO
IEA
(PMID:16945374)
GO_REF:0000107
RGD
Ensembl
PMID:16945374 GO_REF:0000107 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376
JBrowse link
G Apom apolipoprotein M ISO (PMID:16682745), (PMID:22204862)
(MGI:5427066|PMID:22204862)
RGD PMID:16682745, PMID:22204862 MGI:5427066 NCBI chr20:5,120,473...5,123,073
Ensembl chr20:5,120,474...5,123,073
JBrowse link
G Pon1 paraoxonase 1 NOT ISO (PMID:15342686) RGD PMID:15342686 NCBI chr 4:30,249,749...30,276,297
Ensembl chr 4:30,249,742...30,276,372
JBrowse link
negative regulation of very-low-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 ISO
IBA
(PMID:1917954)
PMID:21873635
RGD PMID:1917954, PMID:21873635 RGD:13792537 NCBI chr 1:80,606,638...80,609,921
Ensembl chr 1:80,606,638...80,609,921
JBrowse link
G Apoc2 apolipoprotein C2 ISO
IBA
(PMID:1917954)
PMID:21873635
RGD PMID:1917954, PMID:21873635 RGD:13792537 NCBI chr 1:80,589,023...80,593,991
Ensembl chr 1:80,589,023...80,594,136
JBrowse link
G Apoc3 apolipoprotein C3 ISO
IBA
IEA
(PMID:1917954)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:1917954, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498
JBrowse link
G LOC100910181 apolipoprotein C-I-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Lrpap1 LDL receptor related protein associated protein 1 ISO
IBA
(PMID:8083232)
PMID:21873635
RGD PMID:8083232, PMID:21873635 RGD:13792537 NCBI chr14:80,911,281...80,923,290
Ensembl chr14:80,911,270...80,924,831
JBrowse link
G NEWGENE_2134 apolipoprotein C1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:80,606,634...80,609,954
Ensembl chr 1:80,606,638...80,609,921
JBrowse link
negative regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 ISO (PMID:14967812) RGD PMID:14967812 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoa2 apolipoprotein A2 ISO (PMID:14967812) RGD PMID:14967812 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoc3 apolipoprotein C3 ISO
IEA
(PMID:3973011)
GO_REF:0000107
RGD
Ensembl
PMID:3973011 GO_REF:0000107 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 ISO
IEA
(PMID:27471003)
(MGI:6095248|PMID:27471003)
GO_REF:0000107
RGD
Ensembl
PMID:27471003 GO_REF:0000107, MGI:6095248 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
JBrowse link
oxidised low-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule ISO (PMID:27607416) RGD PMID:27607416 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
plasma lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mttp microsomal triglyceride transfer protein ISO
ISS
(PMID:16478722), (PMID:23475612), (PMID:26224785), (PMID:8876250)
GO_REF:0000024
RGD
UniProt
PMID:8876250, PMID:16478722, PMID:23475612, PMID:26224785 GO_REF:0000024 NCBI chr 2:243,366,181...243,407,608
Ensembl chr 2:243,366,181...243,407,608
JBrowse link
plasma lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule ISO (MGI:2447499|PMID:12376530) RGD PMID:12376530 MGI:2447499 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Ldlr low density lipoprotein receptor ISO (MGI:5902678|PMID:22383525) RGD PMID:22383525 MGI:5902678 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Msr1 macrophage scavenger receptor 1 IBA
ISO
PMID:21873635
(MGI:2447499|PMID:12376530)
RGD PMID:12376530, PMID:21873635 MGI:2447499, RGD:13792537 NCBI chr16:56,817,714...56,900,025
Ensembl chr16:56,813,791...56,900,052
JBrowse link
plasma lipoprotein particle oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pla2g7 phospholipase A2 group VII ISO (PMID:8624782) RGD PMID:8624782 NCBI chr 9:19,935,754...19,978,013
Ensembl chr 9:19,935,768...19,978,013
JBrowse link
plasma lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 ISO (PMID:10978346) RGD PMID:10978346 NCBI chr 1:80,606,638...80,609,921
Ensembl chr 1:80,606,638...80,609,921
JBrowse link
positive regulation of chylomicron remnant clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpihbp1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 ISO (MGI:3770110|PMID:17403372) RGD PMID:17403372 MGI:3770110 NCBI chr 7:116,632,496...116,635,543
Ensembl chr 7:116,632,506...116,634,293
JBrowse link
positive regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (MGI:5427333|PMID:22179027) RGD PMID:22179027 MGI:5427333 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 ISO (MGI:3720271|PMID:17657314), (MGI:3794353|PMID:16825483) RGD PMID:16825483, PMID:17657314 MGI:3720271, MGI:3794353 NCBI chr 1:100,554,577...100,559,896
Ensembl chr 1:100,554,544...100,559,942
JBrowse link
positive regulation of high-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 ISS
ISO
GO_REF:0000024
(MGI:3617276|PMID:16219662)
UniProt
RGD
PMID:16219662 GO_REF:0000024, MGI:3617276 NCBI chr17:42,085,027...42,131,344
Ensembl chr17:42,085,028...42,127,678
JBrowse link
G Lipg lipase G, endothelial type ISO (PMID:19136670) RGD PMID:19136670 NCBI chr18:70,903,528...70,924,434
Ensembl chr18:70,901,710...70,924,708
JBrowse link
positive regulation of low-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:22848640)
(MGI:5446858|PMID:22848640)
RGD PMID:22848640 MGI:5446858 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 ISO (PMID:28257760) RGD PMID:28257760 NCBI chr 5:152,964,294...152,987,286
Ensembl chr 5:152,966,591...152,987,211
JBrowse link
positive regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa5 apolipoprotein A5 ISO
IEA
(PMID:18635818)
GO_REF:0000107
RGD
Ensembl
PMID:18635818 GO_REF:0000107 NCBI chr 8:50,559,079...50,561,720
Ensembl chr 8:50,559,126...50,561,736
JBrowse link
regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lcat lecithin cholesterol acyltransferase ISO (MGI:3848791|PMID:19065001) RGD PMID:19065001 MGI:3848791 NCBI chr19:37,913,333...37,916,799
Ensembl chr19:37,913,336...37,916,813
JBrowse link
regulation of low-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnpy2 canopy FGF signaling regulator 2 ISO (MGI:5427047|PMID:22378787) RGD PMID:22378787 MGI:5427047 NCBI chr 7:2,737,674...2,744,321
Ensembl chr 7:2,737,765...2,742,369
JBrowse link
G Crp C-reactive protein IDA RGD PMID:8305421 RGD:9586002 NCBI chr13:91,080,448...91,081,358
Ensembl chr13:91,054,974...91,093,713
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO (PMID:20371611) RGD PMID:20371611 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 IEA
ISO
GO_REF:0000107
(PMID:12660231)
Ensembl
RGD
PMID:12660231 GO_REF:0000107 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
JBrowse link
triglyceride-rich lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E ISS
ISO
GO_REF:0000024
(MGI:5514108|PMID:23676495)
(PMID:23676495)
UniProt
RGD
PMID:23676495 GO_REF:0000024, MGI:5514108 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
triglyceride-rich lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa2 apolipoprotein A2 ISO
IBA
(PMID:14967812)
PMID:21873635
RGD PMID:14967812, PMID:21873635 RGD:13792537 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoa5 apolipoprotein A5 IEA
ISO
GO_REF:0000107
MGI:3609233 (MGI:3695062|PMID:16166565)
Ensembl
RGD
PMID:16166565 GO_REF:0000107, MGI:3695062 NCBI chr 8:50,559,079...50,561,720
Ensembl chr 8:50,559,126...50,561,736
JBrowse link
very-low-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl3 acyl-CoA synthetase long-chain family member 3 ISO (PMID:18003621) RGD PMID:18003621 NCBI chr 9:84,569,601...84,593,565
Ensembl chr 9:84,569,597...84,593,565
JBrowse link
G Arf1 ADP-ribosylation factor 1 IMP RGD PMID:15618550 RGD:9684856 NCBI chr10:45,562,700...45,579,214
Ensembl chr10:45,563,547...45,579,029
JBrowse link
G Ces1d carboxylesterase 1D IEA
ISO
GO_REF:0000107
MGI:4440967 (MGI:4440377|PMID:20197051)
Ensembl
RGD
PMID:20197051 GO_REF:0000107, MGI:4440377 NCBI chr19:15,195,514...15,239,827
Ensembl chr19:15,033,108...15,239,821
JBrowse link
G Dgat1 diacylglycerol O-acyltransferase 1 ISO
IEA
(PMID:15308631)
GO_REF:0000107
RGD
Ensembl
PMID:15308631 GO_REF:0000107 NCBI chr 7:117,566,363...117,576,735
Ensembl chr 7:117,566,368...117,576,737
JBrowse link
G Fech ferrochelatase ISO MGI:1858114 (MGI:1930023|PMID:11160364) RGD PMID:11160364 MGI:1930023 NCBI chr18:59,941,992...59,975,192
Ensembl chr18:59,941,992...59,975,192
JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 ISS
ISO
GO_REF:0000024
(MGI:5636535|PMID:25806685)
UniProt
RGD
PMID:25806685 GO_REF:0000024, MGI:5636535 NCBI chr 4:157,181,722...157,222,997
Ensembl chr 4:157,181,795...157,222,996
JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A ISO (MGI:5474727|PMID:23209793) RGD PMID:23209793 MGI:5474727 NCBI chr 5:140,642,865...140,657,759
Ensembl chr 5:140,642,885...140,657,745
JBrowse link
G Soat1 sterol O-acyltransferase 1 ISO
IEA
(PMID:15308631)
GO_REF:0000107
RGD
Ensembl
PMID:15308631 GO_REF:0000107 NCBI chr13:74,035,258...74,077,759
Ensembl chr13:74,035,080...74,077,783
JBrowse link
G Soat2 sterol O-acyltransferase 2 ISO
IEA
(PMID:15308631)
GO_REF:0000107
RGD
Ensembl
PMID:15308631 GO_REF:0000107 NCBI chr 7:143,754,892...143,767,989
Ensembl chr 7:143,754,892...143,767,989
JBrowse link
very-low-density lipoprotein particle clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 ISO
IBA
(PMID:15576844)
PMID:21873635
RGD PMID:15576844, PMID:21873635 RGD:13792537 NCBI chr 1:80,606,638...80,609,921
Ensembl chr 1:80,606,638...80,609,921
JBrowse link
G Apoe apolipoprotein E IEA
ISO
ISS
GO_REF:0000107
(PMID:1917954), (PMID:2762297), (PMID:9649566)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:1917954, PMID:2762297, PMID:9649566 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G LOC100910181 apolipoprotein C-I-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G NEWGENE_2134 apolipoprotein C1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:80,606,634...80,609,954
Ensembl chr 1:80,606,638...80,609,921
JBrowse link
G Vldlr very low density lipoprotein receptor ISO
ISS
IEA
(PMID:8083232)
GO_REF:0000024
GO_REF:0000107
RGD
BHF-UCL
Ensembl
PMID:8083232 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:245,236,819...245,273,688
Ensembl chr 1:245,237,736...245,269,205
JBrowse link
very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoa4 apolipoprotein A4 ISO
IBA
IEA
(PMID:2307668)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:2307668, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376
JBrowse link
G Apoa5 apolipoprotein A5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:50,559,079...50,561,720
Ensembl chr 8:50,559,126...50,561,736
JBrowse link
G Apoe apolipoprotein E IEA
ISO
GO_REF:0000107
(MGI:3850619|PMID:15654758)
UniProtKB:P08226 (PMID:12401887), (PMID:15654758)
Ensembl
RGD
PMID:12401887, PMID:15654758 GO_REF:0000107, MGI:3850619 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Lcat lecithin cholesterol acyltransferase ISO (PMID:15654758) RGD PMID:15654758 NCBI chr19:37,913,333...37,916,799
Ensembl chr19:37,913,336...37,916,813
JBrowse link
G Lipc lipase C, hepatic type IDA
IEA
ISO
GO_REF:0000107
(PMID:8640403)
Ensembl
RGD
PMID:8640403, PMID:6791934 GO_REF:0000107, RGD:2308780 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248
JBrowse link
G Lpl lipoprotein lipase ISO (PMID:3973011) RGD PMID:3973011 NCBI chr16:22,537,687...22,561,487
Ensembl chr16:22,537,056...22,561,496
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    regulation of biological process 13071
      regulation of plasma lipoprotein particle levels 67
        plasma lipoprotein particle assembly + 21
        plasma lipoprotein particle clearance + 37
        plasma lipoprotein particle disassembly + 0
        plasma lipoprotein particle remodeling + 27
Path 2
Term Annotations click to browse term
  biological_process 20020
    biological regulation 13769
      regulation of biological process 13071
        regulation of plasma lipoprotein particle levels 67
          plasma lipoprotein particle assembly + 21
          plasma lipoprotein particle clearance + 37
          plasma lipoprotein particle disassembly + 0
          plasma lipoprotein particle remodeling + 27
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.