ONTOLOGY REPORT - ANNOTATIONS |
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Term: | alpha-beta T cell lineage commitment |
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Accession: | GO:0002363
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browse the term
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Definition: | The process in which a pro-T cell becomes committed to becoming an alpha-beta T cell. |
Synonyms: | exact_synonym: | alpha-beta T lymphocyte lineage commitment |
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Rhoa |
ras homolog family member A |
involved_in |
ISO |
(MGI:5640904|PMID:25398325) |
RGD |
PMID:25398325 |
MGI:5640904 |
NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
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Ctsl |
cathepsin L |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:2655909|PMID:9545226) |
UniProt RGD |
PMID:9545226 |
GO_REF:0000024 MGI:2655909 |
NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548
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Tox |
thymocyte selection-associated high mobility group box |
involved_in |
ISO |
(MGI:3773459|PMID:18195075) |
RGD |
PMID:18195075 |
MGI:3773459 |
NCBI chr 5:19,874,994...20,171,272
Ensembl chr 5:19,874,467...20,171,272
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Tox |
thymocyte selection-associated high mobility group box |
involved_in |
ISO |
(MGI:3773459|PMID:18195075) |
RGD |
PMID:18195075 |
MGI:3773459 |
NCBI chr 5:19,874,994...20,171,272
Ensembl chr 5:19,874,467...20,171,272
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Bcl2 |
BCL2, apoptosis regulator |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2156165 (PMID:8170972) |
Ensembl RGD |
PMID:8170972 |
GO_REF:0000107 |
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
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Tox |
thymocyte selection-associated high mobility group box |
involved_in |
ISO |
(MGI:2159528|PMID:11850626), (MGI:3045816|PMID:15078895) |
RGD |
PMID:11850626 PMID:15078895 |
MGI:2159528 MGI:3045816 |
NCBI chr 5:19,874,994...20,171,272
Ensembl chr 5:19,874,467...20,171,272
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Loxl3 |
lysyl oxidase-like 3 |
involved_in |
ISO |
(MGI:5825383|PMID:28065600) (PMID:28065600) |
RGD |
PMID:28065600 |
MGI:5825383 |
NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466
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Tbx21 |
T-box transcription factor 21 |
involved_in |
ISO |
(MGI:4868293|PMID:21151104) |
RGD |
PMID:21151104 |
MGI:4868293 |
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
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Tnfsf18 |
TNF superfamily member 18 |
involved_in |
ISO |
(MGI:5551556|PMID:24107315) |
RGD |
PMID:24107315 |
MGI:5551556 |
NCBI chr13:73,833,478...73,907,249
Ensembl chr13:73,831,252...73,843,169
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Tox |
thymocyte selection-associated high mobility group box |
involved_in |
ISO |
(MGI:3773459|PMID:18195075) |
RGD |
PMID:18195075 |
MGI:3773459 |
NCBI chr 5:19,874,994...20,171,272
Ensembl chr 5:19,874,467...20,171,272
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Brd2 |
bromodomain containing 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:28262505) (MGI:6106706|PMID:28262505) |
UniProt RGD |
PMID:28262505 |
GO_REF:0000024 MGI:6106706 |
NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388
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Brd4 |
bromodomain containing 4 |
involved_in |
ISO |
(MGI:6106706|PMID:28262505) |
RGD |
PMID:28262505 |
MGI:6106706 |
NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
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Ep300 |
E1A binding protein p300 |
involved_in |
ISO |
(PMID:28262505) |
RGD |
PMID:28262505 |
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NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
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Il23a |
interleukin 23 subunit alpha |
involved_in |
ISO IBA |
(MGI:3851279|PMID:19501566) GO_REF:0000033 |
RGD GO_Central |
PMID:19501566 |
GO_REF:0000033 MGI:3851279 |
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
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Opa1 |
OPA1, mitochondrial dynamin like GTPase |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
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GO_REF:0000024 |
NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109
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Il4 |
interleukin 4 |
acts_upstream_of_or_within |
ISO |
MGI:103034 (PMID:20706986) |
RGD |
PMID:20706986 |
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NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
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Mtor |
mechanistic target of rapamycin kinase |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:26410627) |
Ensembl RGD |
PMID:26410627 |
GO_REF:0000107 |
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
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Spn |
sialophorin |
involved_in |
ISO ISS |
(PMID:18036228) GO_REF:0000024 |
RGD UniProt |
PMID:18036228 |
GO_REF:0000024 |
NCBI chr 1:181,746,937...181,759,564
Ensembl chr 1:181,746,429...181,759,628
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Stat6 |
signal transducer and activator of transcription 6 |
acts_upstream_of_or_within |
ISO |
MGI:96556 (PMID:20706986) |
RGD |
PMID:20706986 |
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NCBI chr 7:63,480,229...63,497,551
Ensembl chr 7:63,479,642...63,498,495
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Tbx21 |
T-box transcription factor 21 |
involved_in |
ISO |
(MGI:1354779|PMID:10761931) |
RGD |
PMID:10761931 |
MGI:1354779 |
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
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Batf |
basic leucine zipper ATF-like transcription factor |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3851267|PMID:19578362), (MGI:5448096|PMID:22983707) |
UniProt RGD |
PMID:19578362 PMID:22983707 |
GO_REF:0000024 MGI:3851267 MGI:5448096 |
NCBI chr 6:105,353,715...105,376,051
Ensembl chr 6:105,353,715...105,376,051
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Il6 |
interleukin 6 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3692468|PMID:16990136), (MGI:6142555|PMID:27893700) |
UniProt RGD |
PMID:16990136 PMID:27893700 |
GO_REF:0000024 MGI:3692468 MGI:6142555 |
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
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Il6r |
interleukin 6 receptor |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (MGI:6142555|PMID:27893700) |
UniProt Ensembl RGD |
PMID:27893700 |
GO_REF:0000024 GO_REF:0000107 MGI:6142555 |
NCBI chr 2:175,289,157...175,347,719
Ensembl chr 2:175,298,686...175,347,536
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Irf4 |
interferon regulatory factor 4 |
involved_in |
ISO |
(MGI:5448096|PMID:22983707) |
RGD |
PMID:22983707 |
MGI:5448096 |
NCBI chr17:33,721,800...33,742,570
Ensembl chr17:33,721,811...33,740,070
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Ly9 |
lymphocyte antigen 9 |
involved_in |
ISO |
(PMID:22184727) |
RGD |
PMID:22184727 |
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NCBI chr13:84,079,345...84,100,783
Ensembl chr13:84,079,458...84,100,823
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Otud5 |
OTU deubiquitinase 5 |
acts_upstream_of_or_within |
ISO |
MGI:2386448|MGI:5752247 (PMID:25470037) |
RGD |
PMID:25470037 |
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NCBI chr X:14,626,173...14,659,331
Ensembl chr X:14,626,164...14,659,573
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Slamf6 |
SLAM family member 6 |
involved_in |
ISO IBA |
(PMID:22184727) GO_REF:0000033 |
RGD GO_Central |
PMID:22184727 |
GO_REF:0000033 |
NCBI chr13:84,384,561...84,405,300
Ensembl chr13:84,383,742...84,405,300
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Stat3 |
signal transducer and activator of transcription 3 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:5825383|PMID:28065600) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:28065600 |
GO_REF:0000024 GO_REF:0000107 MGI:5825383 |
NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057
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