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ONTOLOGY REPORT - ANNOTATIONS


Term:cell fate commitment
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Accession:GO:0045165 term browser browse the term
Definition:The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field.
Comment:Note that this term was 'cell fate determination' but the term name was changed to better match its existing definition and the child term 'cell fate determination; GO:0001709' was also created.


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cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Barhl2 BarH-like homeobox 2 ISO (MGI:MGI:3039051|PMID:14998930) RGD PMID:14998930 MGI:MGI:3039051 NCBI chr14:4,362,717...4,367,614
Ensembl chr14:4,362,717...4,367,605
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO
IEA
(MGI:MGI:2429473|PMID:12421925)
GO_REF:0000107
RGD
Ensembl
PMID:12421925 GO_REF:0000107, MGI:MGI:2429473 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO (MGI:MGI:2429473|PMID:12421925) RGD PMID:12421925 MGI:MGI:2429473 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Casp3 caspase 3 ISO MGI:MGI:2178778 (MGI:MGI:3042356|PMID:15068794) RGD PMID:15068794 MGI:MGI:3042356 NCBI chr16:48,845,011...48,863,249
Ensembl chr16:48,845,012...48,863,204
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO
IEA
(MGI:MGI:2445853|PMID:12399441)
GO_REF:0000107
RGD
Ensembl
PMID:12399441 GO_REF:0000107, MGI:MGI:2445853 NCBI chr 9:75,021,790...76,178,936
Ensembl chr 9:75,021,790...75,528,644
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:MGI:4453287|PMID:20022960) RGD PMID:20022960 MGI:MGI:4453287 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO MGI:MGI:1857803|MGI:MGI:2150426 (MGI:MGI:3577160|PMID:15817220), (MGI:MGI:3588889|PMID:16018995) RGD PMID:15817220, PMID:16018995 MGI:MGI:3577160, MGI:MGI:3588889 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO MGI:MGI:1345138 (MGI:MGI:3577817|PMID:15809037) RGD PMID:15809037 MGI:MGI:3577817 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:3629660 (MGI:MGI:3521553|PMID:15509736), (MGI:MGI:3688953|PMID:16989802) RGD PMID:15509736, PMID:16989802 MGI:MGI:3521553, MGI:MGI:3688953 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Gap43 growth associated protein 43 ISO (MGI:MGI:3531391|PMID:15234344) RGD PMID:15234344 MGI:MGI:3531391 NCBI chr11:58,624,198...58,717,916
Ensembl chr11:58,624,198...58,717,914
JBrowse link
G Gas1 growth arrest-specific 1 ISO MGI:MGI:2388397|MGI:MGI:3711070|MGI:MGI:98297 (MGI:MGI:2138055|PMID:11456441), (MGI:MGI:3710451|PMID:17504941) RGD PMID:11456441, PMID:17504941 MGI:MGI:2138055, MGI:MGI:3710451 NCBI chr17:4,846,116...4,849,350
Ensembl chr17:4,846,789...4,847,940
JBrowse link
G Gata1 GATA binding protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:15,273,937...15,281,759
Ensembl chr  X:15,378,789...15,382,066
JBrowse link
G Gata2 GATA binding protein 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Gata3 GATA binding protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Gata4 GATA binding protein 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
JBrowse link
G Gata5 GATA binding protein 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:175,701,278...175,709,465
Ensembl chr 3:175,701,280...175,709,465
JBrowse link
G Gata6 GATA binding protein 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
JBrowse link
G Gdf7 growth differentiation factor 7 ISO (MGI:MGI:3581508|PMID:15883363) RGD PMID:15883363 MGI:MGI:3581508 NCBI chr 6:33,496,596...33,507,626
Ensembl chr 6:33,503,217...33,507,542
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor ISO MGI:MGI:2449921 (MGI:MGI:3606816|PMID:16230531) RGD PMID:16230531 MGI:MGI:3606816 NCBI chr14:3,058,035...3,073,332
Ensembl chr14:3,058,993...3,068,371
JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO MGI:MGI:2149672 (MGI:MGI:1888698|PMID:10952889) RGD PMID:10952889 MGI:MGI:1888698 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 ISO (MGI:MGI:3833041|PMID:19154718) RGD PMID:19154718 MGI:MGI:3833041 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Hoxa2 homeobox A2 ISO MGI:MGI:1857530|MGI:MGI:1857626 (MGI:MGI:64469|PMID:7903601), (MGI:MGI:64470|PMID:7903600) RGD PMID:7903600, PMID:7903601 MGI:MGI:64469, MGI:MGI:64470 NCBI chr 4:82,130,441...82,134,846
Ensembl chr 4:82,131,329...82,133,605
JBrowse link
G Kdm6b lysine demethylase 6B ISO (MGI:MGI:3809360|PMID:18716661) RGD PMID:18716661 MGI:MGI:3809360 NCBI chr10:56,000,494...56,009,582
Ensembl chr10:56,001,799...56,008,885
JBrowse link
G Kdr kinase insert domain receptor ISO (MGI:MGI:2450018|PMID:12569129) RGD PMID:12569129 MGI:MGI:2450018 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
G LOC108348091 erythroid transcription factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:15,374,725...15,382,575
Ensembl chr  X:15,273,933...15,281,759
JBrowse link
G Mef2c myocyte enhancer factor 2C ISO MGI:MGI:3603182 (MGI:MGI:3836820|PMID:19169261) RGD PMID:19169261 MGI:MGI:3836820 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Mitf melanocyte inducing transcription factor ISO MGI:MGI:1856085 (MGI:MGI:3512656|PMID:15576400) RGD PMID:15576400 MGI:MGI:3512656 NCBI chr 4:130,172,484...130,425,496
Ensembl chr 4:130,172,727...130,425,532
JBrowse link
G Neurod1 neuronal differentiation 1 ISO MGI:MGI:108055 (MGI:MGI:2158684|PMID:11861467) RGD PMID:11861467 MGI:MGI:2158684 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
G Neurod4 neuronal differentiation 4 ISO MGI:MGI:1339708 (MGI:MGI:1926546|PMID:11032813) RGD PMID:11032813 MGI:MGI:1926546 NCBI chr 7:9,699,964...9,712,067
Ensembl chr 7:9,699,961...9,711,928
JBrowse link
G Neurog1 neurogenin 1 ISO MGI:MGI:109619 (MGI:MGI:3055655|PMID:15229646) RGD PMID:15229646 MGI:MGI:3055655 NCBI chr17:9,154,656...9,156,175
Ensembl chr17:9,154,656...9,156,175
JBrowse link
G Neurog2 neurogenin 2 ISO MGI:MGI:107754 (MGI:MGI:3055655|PMID:15229646) RGD PMID:15229646 MGI:MGI:3055655 NCBI chr 2:231,962,517...231,963,441
Ensembl chr 2:231,962,517...231,963,308
JBrowse link
G Nodal nodal growth differentiation factor ISO MGI:MGI:2668418 (MGI:MGI:2667288|PMID:12842913) RGD PMID:12842913 MGI:MGI:2667288 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
JBrowse link
G Notch1 notch receptor 1 ISO MGI:MGI:2447212|MGI:MGI:2684314 (MGI:MGI:3603059|PMID:16107537) RGD PMID:16107537 MGI:MGI:3603059 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 ISO MGI:MGI:97490 (MGI:MGI:3055655|PMID:15229646) RGD PMID:15229646 MGI:MGI:3055655 NCBI chr20:47,286,843...47,306,318
Ensembl chr20:47,288,137...47,306,318
JBrowse link
G Onecut1 one cut homeobox 1 ISO
IEA
MGI:MGI:1891408 (MGI:MGI:3588024|PMID:16103213)
GO_REF:0000107
RGD
Ensembl
PMID:16103213 GO_REF:0000107, MGI:MGI:3588024 NCBI chr 8:81,765,779...81,799,894
Ensembl chr 8:81,766,041...81,793,577
JBrowse link
G Onecut2 one cut homeobox 2 ISO MGI:MGI:1196423 (MGI:MGI:3588024|PMID:16103213) RGD PMID:16103213 MGI:MGI:3588024 NCBI chr18:59,830,375...59,882,490
Ensembl chr18:59,830,363...59,875,127
JBrowse link
G Otx2 orthodenticle homeobox 2 ISO MGI:MGI:2661065 (MGI:MGI:3039992|PMID:15105370) RGD PMID:15105370 MGI:MGI:3039992 NCBI chr15:25,500,037...25,511,619
Ensembl chr15:25,502,019...25,505,691
JBrowse link
G Pax6 paired box 6 ISO MGI:MGI:1100526|MGI:MGI:1856155 (MGI:MGI:3055655|PMID:15229646), (MGI:MGI:3581509|PMID:15878992) RGD PMID:15229646, PMID:15878992 MGI:MGI:3055655, MGI:MGI:3581509 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
G Pml PML nuclear body scaffold ISO MGI:MGI:2429949 (MGI:MGI:3839212|PMID:19261859) RGD PMID:19261859 MGI:MGI:3839212 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Pou5f1 POU class 5 homeobox 1 ISO MGI:MGI:1933381 (MGI:MGI:1314760|PMID:9814708) RGD PMID:9814708 MGI:MGI:1314760 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma ISO MGI:MGI:102784|MGI:MGI:2651605 (MGI:MGI:3527921|PMID:15687259), (MGI:MGI:5582971|PMID:24703703) RGD PMID:15687259, PMID:24703703 MGI:MGI:3527921, MGI:MGI:5582971 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Prdm1 PR/SET domain 1 ISO
IBA
MGI:MGI:3586884|MGI:MGI:3605483 (MGI:MGI:3584335|PMID:15937476), (MGI:MGI:3604853|PMID:15750184)
PMID:21873635
RGD PMID:15750184, PMID:15937476, PMID:21873635 MGI:MGI:3584335, MGI:MGI:3604853, RGD:13792537 NCBI chr20:49,464,921...49,556,623
Ensembl chr20:49,464,919...49,556,518
JBrowse link
G Ptf1a pancreas associated transcription factor 1a ISO MGI:MGI:2387804|MGI:MGI:3771319 (MGI:MGI:2385974|PMID:12185368), (MGI:MGI:3759692|PMID:17938243) RGD PMID:12185368, PMID:17938243 MGI:MGI:2385974, MGI:MGI:3759692 NCBI chr17:86,199,623...86,201,477
Ensembl chr17:86,199,623...86,201,477
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO MGI:MGI:3583755 (MGI:MGI:3664138|PMID:17015435) RGD PMID:17015435 MGI:MGI:3664138 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 ISO MGI:MGI:3793279 (MGI:MGI:4822496|PMID:20660756) RGD PMID:20660756 MGI:MGI:4822496 NCBI chr17:11,953,552...12,134,386
Ensembl chr17:11,953,552...12,134,386
JBrowse link
G Shh sonic hedgehog signaling molecule ISO MGI:MGI:95655 (MGI:MGI:3710451|PMID:17504941) RGD PMID:17504941 MGI:MGI:3710451 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smad2 SMAD family member 2 ISO
ISS
MGI:MGI:2668416 (MGI:MGI:2667288|PMID:12842913)
GO_REF:0000024
RGD
UniProt
PMID:12842913 GO_REF:0000024, MGI:MGI:2667288 NCBI chr18:72,550,107...72,612,078
Ensembl chr18:72,550,219...72,612,078
JBrowse link
G Sox12 SRY-box transcription factor 12 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:147,864,374...147,865,393
Ensembl chr 3:147,864,374...147,865,393
JBrowse link
G Sox13 SRY-box transcription factor 13 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:50,434,702...50,479,118
Ensembl chr13:50,434,702...50,479,657
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO
IBA
(MGI:MGI:3795352|PMID:18374910)
PMID:21873635
RGD PMID:18374910, PMID:21873635 MGI:MGI:3795352, RGD:13792537 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Sox5 SRY-box transcription factor 5 ISO
IBA
MGI:MGI:98368 (MGI:MGI:3525903|PMID:15634692)
PMID:21873635
RGD PMID:15634692, PMID:21873635 MGI:MGI:3525903, RGD:13792537 NCBI chr 4:178,062,267...179,031,991
Ensembl chr 4:178,066,165...178,441,547
JBrowse link
G Sox6 SRY-box transcription factor 6 ISO
IBA
MGI:MGI:98367 (MGI:MGI:3525903|PMID:15634692)
PMID:21873635
RGD PMID:15634692, PMID:21873635 MGI:MGI:3525903, RGD:13792537 NCBI chr 1:185,631,702...186,186,192
Ensembl chr 1:185,673,177...186,182,829
JBrowse link
G Sox8 SRY-box transcription factor 8 ISO
ISS
MGI:MGI:98371 (MGI:MGI:3578716|PMID:15893981)
GO_REF:0000024
RGD
UniProt
PMID:15893981 GO_REF:0000024, MGI:MGI:3578716 NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO MGI:MGI:98370 (MGI:MGI:3578716|PMID:15893981) RGD PMID:15893981 MGI:MGI:3578716 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 ISO MGI:MGI:3578633|MGI:MGI:99604 (MGI:MGI:3577817|PMID:15809037) RGD PMID:15809037 MGI:MGI:3577817 NCBI chr15:90,172,769...90,177,823
Ensembl chr15:90,172,975...90,175,802
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor ISO (MGI:MGI:2450018|PMID:12569129) RGD PMID:12569129 MGI:MGI:2450018 NCBI chr 5:133,864,401...133,878,604
Ensembl chr 5:133,864,798...133,878,830
JBrowse link
G Tbx19 T-box transcription factor 19 ISO MGI:MGI:2655153 (MGI:MGI:2653675|PMID:12651892) RGD PMID:12651892 MGI:MGI:2653675 NCBI chr13:83,403,263...83,426,305
Ensembl chr13:83,403,264...83,425,641
JBrowse link
G Tead4 TEA domain transcription factor 4 ISO (MGI:MGI:5426342|PMID:22529382) RGD PMID:22529382 MGI:MGI:5426342 NCBI chr 4:161,542,566...161,619,848
Ensembl chr 4:161,540,130...161,587,222
JBrowse link
G Tgfb1i1 transforming growth factor beta 1 induced transcript 1 ISO MGI:MGI:97747 (MGI:MGI:3527921|PMID:15687259) RGD PMID:15687259 MGI:MGI:3527921 NCBI chr 1:199,664,039...199,670,970
Ensembl chr 1:199,664,173...199,670,961
JBrowse link
G Tlx1 T-cell leukemia, homeobox 1 ISO MGI:MGI:3581680 (MGI:MGI:3621683|PMID:11356032) RGD PMID:11356032 MGI:MGI:3621683 NCBI chr 1:264,893,033...264,899,424
Ensembl chr 1:264,893,162...264,899,423
JBrowse link
G Vsx2 visual system homeobox 2 ISO MGI:MGI:1856112 (MGI:MGI:3512656|PMID:15576400) RGD PMID:15576400 MGI:MGI:3512656 NCBI chr 6:108,285,031...108,308,588
Ensembl chr 6:108,285,822...108,308,587
JBrowse link
G Wnt1 Wnt family member 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
JBrowse link
G Wnt10a Wnt family member 10A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:82,053,581...82,066,047
Ensembl chr 9:82,053,581...82,066,047
JBrowse link
G Wnt10b Wnt family member 10B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:140,448,284...140,466,159
Ensembl chr 7:140,448,465...140,454,268
JBrowse link
G Wnt11 Wnt family member 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Wnt16 Wnt family member 16 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:49,369,246...49,388,156
Ensembl chr 4:49,369,296...49,379,703
JBrowse link
G Wnt2 Wnt family member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420
JBrowse link
G Wnt2b Wnt family member 2B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:207,433,771...207,457,094
Ensembl chr 2:207,440,886...207,455,258
JBrowse link
G Wnt3 Wnt family member 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:91,830,709...91,874,907
Ensembl chr10:91,830,654...91,874,793
JBrowse link
G Wnt3a Wnt family member 3A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Wnt4 Wnt family member 4 ISO
IBA
IEA
MGI:MGI:1857453 (MGI:MGI:3777488|PMID:18351662)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:18351662, PMID:21873635 GO_REF:0000107, MGI:MGI:3777488, RGD:13792537 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
G Wnt5a Wnt family member 5A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Wnt5b Wnt family member 5B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:151,500,962...151,516,894
Ensembl chr 4:151,500,957...151,516,894
JBrowse link
G Wnt6 Wnt family member 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:82,033,543...82,047,172
Ensembl chr 9:82,033,543...82,047,166
JBrowse link
G Wnt7a Wnt family member 7A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
G Wnt7b Wnt family member 7B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723
JBrowse link
G Wnt8a Wnt family member 8A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:27,331,236...27,336,829
Ensembl chr18:27,331,236...27,336,829
JBrowse link
G Wnt8b Wnt family member 8B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:264,244,150...264,266,136
Ensembl chr 1:264,260,505...264,264,302
JBrowse link
G Wnt9a Wnt family member 9A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:45,659,045...45,686,103
Ensembl chr10:45,659,143...45,681,393
JBrowse link
G Wnt9b Wnt family member 9B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
JBrowse link
activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO
IEA
MGI:MGI:3716756 (MGI:MGI:3714080|PMID:17317769)
GO_REF:0000107
RGD
Ensembl
PMID:17317769 GO_REF:0000107, MGI:MGI:3714080 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rhoa ras homolog family member A ISO (MGI:MGI:5640904|PMID:25398325) RGD PMID:25398325 MGI:MGI:5640904 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
arterial endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO (MGI:MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:MGI:3056004 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
astrocyte fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcm1 glial cells missing transcription factor 1 ISO (MGI:MGI:3630207|PMID:14573516) RGD PMID:14573516 MGI:MGI:3630207 NCBI chr 8:85,355,766...85,369,002
Ensembl chr 8:85,355,766...85,369,002
JBrowse link
G Sox8 SRY-box transcription factor 8 ISO MGI:MGI:98371 (MGI:MGI:4368088|PMID:19490914) RGD PMID:19490914 MGI:MGI:4368088 NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO MGI:MGI:98370 (MGI:MGI:4368088|PMID:19490914) RGD PMID:19490914 MGI:MGI:4368088 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor ISO MGI:MGI:2176173|MGI:MGI:2661471 (MGI:MGI:3768218|PMID:16292311) RGD PMID:16292311 MGI:MGI:3768218 NCBI chr 5:133,864,401...133,878,604
Ensembl chr 5:133,864,798...133,878,830
JBrowse link
asymmetric neuroblast division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 ISO
ISS
(PMID:28453519)
GO_REF:0000024
(MGI:MGI:5907381|PMID:28453519)
RGD
UniProt
PMID:28453519 GO_REF:0000024, MGI:MGI:5907381 NCBI chr 2:187,964,100...188,022,847
Ensembl chr 2:187,977,008...188,021,377
JBrowse link
G Sox5 SRY-box transcription factor 5 ISO UniProtKB:Q23045 (PMID:23946438) RGD PMID:23946438 NCBI chr 4:178,062,267...179,031,991
Ensembl chr 4:178,066,165...178,441,547
JBrowse link
G Tead3 TEA domain transcription factor 3 ISO UniProtKB:Q19849 (PMID:23946438) RGD PMID:23946438 NCBI chr20:7,911,562...7,930,949
Ensembl chr20:7,908,226...7,930,929
JBrowse link
asymmetric protein localization involved in cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt7a Wnt family member 7A ISO (MGI:MGI:3849215|PMID:19497282) RGD PMID:19497282 MGI:MGI:3849215 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
atrioventricular node cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-5 NK2 homeobox 5 ISO
IEA
MGI:MGI:3042511 (MGI:MGI:3040116|PMID:15109497)
GO_REF:0000107
RGD
Ensembl
PMID:15109497 GO_REF:0000107, MGI:MGI:3040116 NCBI chr10:16,635,989...16,638,758
Ensembl chr10:16,635,989...16,638,764
JBrowse link
auditory receptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 NAS PMID:10878608 UniProt PMID:10878608 RGD:8553270 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
G Jag2 jagged canonical Notch ligand 2 IEA
ISS
ISO
GO_REF:0000107
PMID:10080181
(MGI:MGI:1332721|PMID:10080181)
Ensembl
RGD
PMID:10080181, PMID:10080181 GO_REF:0000107, MGI:MGI:1332721, RGD:8553713 NCBI chr 6:137,711,144...137,733,331
Ensembl chr 6:137,711,155...137,733,026
JBrowse link
G Notch1 notch receptor 1 ISO MGI:MGI:3044585|MGI:MGI:3046196 (MGI:MGI:3833041|PMID:19154718) RGD PMID:19154718 MGI:MGI:3833041 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO MGI:MGI:3046196|MGI:MGI:3583755 (MGI:MGI:3833041|PMID:19154718) RGD PMID:19154718 MGI:MGI:3833041 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
auditory receptor cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 ISO (MGI:MGI:3611666|PMID:16407553) RGD PMID:16407553 MGI:MGI:3611666 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 ISO MGI:MGI:2155983 (MGI:MGI:1339217|PMID:10364557) RGD PMID:10364557 MGI:MGI:1339217 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
axial mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor ISO (MGI:MGI:2677178|PMID:14511481) RGD PMID:14511481 MGI:MGI:2677178 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
JBrowse link
B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator ISO
IEA
MGI:MGI:2156165 (MGI:MGI:78866|PMID:8788039)
GO_REF:0000107
RGD
Ensembl
PMID:8788039 GO_REF:0000107, MGI:MGI:78866 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO MGI:MGI:1857113 (MGI:MGI:78866|PMID:8788039) RGD PMID:8788039 MGI:MGI:78866 NCBI chr11:89,293,547...89,510,948
Ensembl chr11:89,293,696...89,510,871
JBrowse link
G Rag2 recombination activating 2 ISO MGI:MGI:1858556 (MGI:MGI:78866|PMID:8788039) RGD PMID:8788039 MGI:MGI:78866 NCBI chr 3:91,191,837...91,200,134
Ensembl chr 3:91,191,837...91,200,134
JBrowse link
G Tcf3 transcription factor 3 ISO
ISS
(PMID:15030778)
GO_REF:0000024
RGD
UniProt
PMID:15030778 GO_REF:0000024 NCBI chr 7:12,146,642...12,168,400
Ensembl chr 7:12,144,162...12,168,410
JBrowse link
G Tp53 tumor protein p53 ISO MGI:MGI:1857590 (MGI:MGI:78866|PMID:8788039) RGD PMID:8788039 MGI:MGI:78866 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
B-1 B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slamf8 SLAM family member 8 ISO (MGI:MGI:6215454|PMID:11313408) RGD PMID:11313408 MGI:MGI:6215454 NCBI chr13:90,967,862...90,978,752
Ensembl chr13:90,967,739...90,977,734
JBrowse link
blood vessel endothelial cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO UniProtKB:P52800 (MGI:MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:MGI:3056004 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
BMP signaling pathway involved in mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etv2 ETS variant transcription factor 2 ISO (MGI:MGI:4415813|PMID:18462699) RGD PMID:18462699 MGI:MGI:4415813 NCBI chr 1:89,091,239...89,094,570
Ensembl chr 1:89,091,239...89,094,530
JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule ISO MGI:MGI:1934258 (MGI:MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:MGI:3807419 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3a Wnt family member 3A ISO (PMID:20559569) RGD PMID:20559569 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Wnt8a Wnt family member 8A ISO (PMID:20559569) RGD PMID:20559569 NCBI chr18:27,331,236...27,336,829
Ensembl chr18:27,331,236...27,336,829
JBrowse link
cardiac cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isl1 ISL LIM homeobox 1 ISO (PMID:19571884)
(MGI:MGI:4438134|PMID:19620969)
RGD PMID:19571884, PMID:19620969 MGI:MGI:4438134 NCBI chr 2:48,488,911...48,501,217
Ensembl chr 2:48,487,736...48,501,436
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 ISO (MGI:MGI:4441249|PMID:18593560) RGD PMID:18593560 MGI:MGI:4441249 NCBI chr 1:141,532,390...141,533,908
Ensembl chr 1:141,532,390...141,533,908
JBrowse link
G Pou5f1 POU class 5 homeobox 1 ISO (PMID:19736317) RGD PMID:19736317 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
G Sox17 SRY-box transcription factor 17 ISO (PMID:19736317) RGD PMID:19736317 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
cardiac cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tenm4 teneurin transmembrane protein 4 ISO MGI:MGI:3655239 (MGI:MGI:5429684|PMID:17350578) RGD PMID:17350578 MGI:MGI:5429684 NCBI chr 1:161,183,858...161,885,094
Ensembl chr 1:161,401,527...161,880,923
JBrowse link
cardiac muscle cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 ISO
IEA
(PMID:19506109)
GO_REF:0000107
RGD
Ensembl
PMID:19506109 GO_REF:0000107 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
JBrowse link
G RGD1311744 similar to RIKEN cDNA 5830475I06 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:43,315,104...43,336,357
Ensembl chr 8:43,315,592...43,336,304
JBrowse link
G Tbx3 T-box transcription factor 3 ISO MGI:MGI:3710254 (MGI:MGI:3847383|PMID:18467625) RGD PMID:18467625 MGI:MGI:3847383 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
G Wnt3a Wnt family member 3A ISO MGI:MGI:2143322 (MGI:MGI:5295932|PMID:21554246) RGD PMID:21554246 MGI:MGI:5295932 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Wt1 WT1 transcription factor ISO (MGI:MGI:5285454|PMID:21654746) RGD PMID:21654746 MGI:MGI:5285454 NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
JBrowse link
CD4-positive or CD8-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO MGI:MGI:1857579 (MGI:MGI:3773982|PMID:18228248) RGD PMID:18228248 MGI:MGI:3773982 NCBI chr 4:67,389,331...67,520,549
Ensembl chr 4:67,396,192...67,520,356
JBrowse link
G Cyld CYLD lysine 63 deubiquitinase ISO
IEA
MGI:MGI:3664438 (MGI:MGI:3656194|PMID:16501569)
GO_REF:0000107
RGD
Ensembl
PMID:16501569 GO_REF:0000107, MGI:MGI:3656194 NCBI chr19:19,264,984...19,323,817
Ensembl chr19:19,265,164...19,315,357
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
ISS
IEA
(PMID:17227833)
GO_REF:0000024
GO_REF:0000107
(MGI:MGI:3834308|PMID:17227833)
RGD
UniProt
Ensembl
PMID:17227833 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3834308 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
CD4-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsl cathepsin L ISS
ISO
GO_REF:0000024
(MGI:MGI:2655909|PMID:9545226)
UniProt
RGD
PMID:9545226 GO_REF:0000024, MGI:MGI:2655909 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279
JBrowse link
G Tox thymocyte selection-associated high mobility group box ISO (MGI:MGI:3773459|PMID:18195075) RGD PMID:18195075 MGI:MGI:3773459 NCBI chr 5:19,892,698...20,189,721
Ensembl chr 5:19,892,698...20,189,721
JBrowse link
CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tox thymocyte selection-associated high mobility group box ISO (MGI:MGI:3773459|PMID:18195075) RGD PMID:18195075 MGI:MGI:3773459 NCBI chr 5:19,892,698...20,189,721
Ensembl chr 5:19,892,698...20,189,721
JBrowse link
CD8-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator ISO
IEA
MGI:MGI:2156165 (MGI:MGI:2156164|PMID:8170972)
GO_REF:0000107
RGD
Ensembl
PMID:8170972 GO_REF:0000107, MGI:MGI:2156164 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Tox thymocyte selection-associated high mobility group box ISO (MGI:MGI:2159528|PMID:11850626), (MGI:MGI:3045816|PMID:15078895) RGD PMID:11850626, PMID:15078895 MGI:MGI:2159528, MGI:MGI:3045816 NCBI chr 5:19,892,698...20,189,721
Ensembl chr 5:19,892,698...20,189,721
JBrowse link
cell fate commitment involved in formation of primary germ layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou5f1 POU class 5 homeobox 1 ISO (PMID:19736317) RGD PMID:19736317 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf3 activating transcription factor 3 TAS RGD PMID:15990869 RGD:1578388 NCBI chr13:109,817,892...109,849,632
Ensembl chr13:109,817,728...109,849,632
JBrowse link
G Barhl2 BarH-like homeobox 2 ISO (MGI:MGI:2654373|PMID:12657654) RGD PMID:12657654 MGI:MGI:2654373 NCBI chr14:4,362,717...4,367,614
Ensembl chr14:4,362,717...4,367,605
JBrowse link
G Chrdl1 chordin-like 1 IMP RGD PMID:14684875 RGD:1299653 NCBI chr  X:114,554,359...114,658,975
Ensembl chr  X:114,554,359...114,658,931
JBrowse link
G Ctnnb1 catenin beta 1 ISO MGI:MGI:2148567|MGI:MGI:2176173 (MGI:MGI:3529734|PMID:15708565) RGD PMID:15708565 MGI:MGI:3529734 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 ISO MGI:MGI:3039046 (MGI:MGI:3623704|PMID:16574820) RGD PMID:16574820 MGI:MGI:3623704 NCBI chr 4:116,261,796...116,278,615
Ensembl chr 4:116,261,796...116,278,615
JBrowse link
G Dll1 delta like canonical Notch ligand 1 TAS RGD PMID:14743446 RGD:1304491 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
G Dll3 delta like canonical Notch ligand 3 TAS RGD PMID:14743446 RGD:1304491 NCBI chr 1:85,485,875...85,493,683
Ensembl chr 1:85,485,289...85,493,685
JBrowse link
G Ebf2 EBF transcription factor 2 ISO (MGI:MGI:5495569|PMID:23499423) RGD PMID:23499423 MGI:MGI:5495569 NCBI chr15:43,905,099...44,103,742
Ensembl chr15:43,905,099...44,103,742
JBrowse link
G Gata2 GATA binding protein 2 ISO (MGI:MGI:2137782|PMID:10367888) RGD PMID:10367888 MGI:MGI:2137782 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Gata3 GATA binding protein 3 ISO
ISS
(MGI:MGI:2673774|PMID:12923059)
GO_REF:0000024
RGD
UniProt
PMID:12923059 GO_REF:0000024, MGI:MGI:2673774 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Hoxa2 homeobox A2 ISO MGI:MGI:2385711 (MGI:MGI:3608156|PMID:16221728) RGD PMID:16221728 MGI:MGI:3608156 NCBI chr 4:82,130,441...82,134,846
Ensembl chr 4:82,131,329...82,133,605
JBrowse link
G Jag1 jagged canonical Notch ligand 1 NAS PMID:9207788
PMID:9268641
UniProt PMID:9207788, PMID:9268641 RGD:8553672, RGD:8553717 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Jag2 jagged canonical Notch ligand 2 NAS PMID:8948600 UniProt PMID:8948600 RGD:69864 NCBI chr 6:137,711,144...137,733,331
Ensembl chr 6:137,711,155...137,733,026
JBrowse link
G Nkx6-3 NK6 homeobox 3 ISO MGI:MGI:3795186 (MGI:MGI:3795066|PMID:18347062) RGD PMID:18347062 MGI:MGI:3795066 NCBI chr16:73,665,269...73,670,482
Ensembl chr16:73,665,269...73,670,482
JBrowse link
G Notch2 notch receptor 2 IDA RGD PMID:1295745 RGD:69906 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215
JBrowse link
G Pax2 paired box 2 ISO
ISS
MGI:MGI:1857673 (MGI:MGI:2662558|PMID:12756174)
GO_REF:0000024
RGD
UniProt
PMID:12756174 GO_REF:0000024, MGI:MGI:2662558 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax6 paired box 6 ISO
IEA
MGI:MGI:1934347 (MGI:MGI:2662558|PMID:12756174)
GO_REF:0000107
RGD
Ensembl
PMID:12756174 GO_REF:0000107, MGI:MGI:2662558 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
G Prox1 prospero homeobox 1 ISO MGI:MGI:2386336 (MGI:MGI:2658694|PMID:12692551) RGD PMID:12692551 MGI:MGI:2658694 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Ptch1 patched 1 ISO MGI:MGI:1095405 (MGI:MGI:5571965|PMID:24492243) RGD PMID:24492243 MGI:MGI:5571965 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Ptch2 patched 2 ISO MGI:MGI:105373 (MGI:MGI:5571965|PMID:24492243) RGD PMID:24492243 MGI:MGI:5571965 NCBI chr 5:135,962,252...135,983,816
Ensembl chr 5:135,962,911...135,983,816
JBrowse link
cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531
JBrowse link
G Apc2 APC regulator of WNT signaling pathway 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:12,258,468...12,280,459
Ensembl chr 7:12,258,468...12,275,609
JBrowse link
G Cdon cell adhesion associated, oncogene regulated ISO
IEA
MGI:MGI:98297 (MGI:MGI:3624618|PMID:16647304)
GO_REF:0000107
RGD
Ensembl
PMID:16647304 GO_REF:0000107, MGI:MGI:3624618 NCBI chr 8:36,625,757...36,712,091
Ensembl chr 8:36,625,733...36,710,949
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
MGI:MGI:2148591|MGI:MGI:2148594|MGI:MGI:2450929 (MGI:MGI:3578464|PMID:15866163)
GO_REF:0000107
RGD
Ensembl
PMID:15866163 GO_REF:0000107, MGI:MGI:3578464 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Dhh desert hedgehog signaling molecule IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:140,575,288...140,580,783
Ensembl chr 7:140,575,288...140,580,783
JBrowse link
G Eomes eomesodermin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:127,144,367...127,152,618
Ensembl chr 8:127,144,903...127,151,493
JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 ISO MGI:MGI:3042750 (MGI:MGI:3039989|PMID:15105374), (MGI:MGI:3806189|PMID:18590716) RGD PMID:15105374, PMID:18590716 MGI:MGI:3039989, MGI:MGI:3806189 NCBI chr16:20,645,956...20,652,890
Ensembl chr16:20,645,957...20,652,889
JBrowse link
G Foxa2 forkhead box A2 ISO
ISS
(MGI:MGI:3772421|PMID:18076286)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:18076286 GO_REF:0000024, MGI:MGI:3772421 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO
IBA
MGI:MGI:1934258 (MGI:MGI:3807419|PMID:18582859)
PMID:21873635
RGD PMID:18582859, PMID:21873635 MGI:MGI:3807419, RGD:13792537 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Itgb1 integrin subunit beta 1 ISO
IEA
MGI:MGI:2154539 (MGI:MGI:84974|PMID:9004034)
GO_REF:0000107
RGD
Ensembl
PMID:9004034 GO_REF:0000107, MGI:MGI:84974 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Mga MAX dimerization protein MGA IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:111,669,645...111,760,822
Ensembl chr 3:111,699,021...111,759,911
JBrowse link
G Notch1 notch receptor 1 ISO MGI:MGI:2178778 (MGI:MGI:3042356|PMID:15068794) RGD PMID:15068794 MGI:MGI:3042356 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Otx2 orthodenticle homeobox 2 ISO MGI:MGI:2176222|MGI:MGI:2661065 (MGI:MGI:3578035|PMID:15888661) RGD PMID:15888661 MGI:MGI:3578035 NCBI chr15:25,500,037...25,511,619
Ensembl chr15:25,502,019...25,505,691
JBrowse link
G Pou1f1 POU class 1 homeobox 1 ISO (MGI:MGI:2137782|PMID:10367888) RGD PMID:10367888 MGI:MGI:2137782 NCBI chr11:2,645,659...2,662,581
Ensembl chr11:2,645,865...2,662,579
JBrowse link
G Prdm14 PR/SET domain 14 ISO MGI:MGI:3805889 (MGI:MGI:3805418|PMID:18622394) RGD PMID:18622394 MGI:MGI:3805418 NCBI chr 5:5,710,076...5,730,560
Ensembl chr 5:5,710,392...5,730,560
JBrowse link
G Psen1 presenilin 1 ISO MGI:MGI:109284 (MGI:MGI:3513219|PMID:15525534) RGD PMID:15525534 MGI:MGI:3513219 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Psen2 presenilin 2 ISO MGI:MGI:1202717 (MGI:MGI:3513219|PMID:15525534) RGD PMID:15525534 MGI:MGI:3513219 NCBI chr13:98,513,600...98,539,347
Ensembl chr13:98,513,570...98,530,724
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
MGI:MGI:1857796|MGI:MGI:1926387 (MGI:MGI:2387225|PMID:12231626), (MGI:MGI:3624618|PMID:16647304), (MGI:MGI:3772421|PMID:18076286)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12231626, PMID:16647304, PMID:18076286, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:2387225, MGI:MGI:3624618, MGI:MGI:3772421, RGD:13792537 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smo smoothened, frizzled class receptor ISO
IEA
MGI:MGI:2176255 (MGI:MGI:3806189|PMID:18590716)
GO_REF:0000107
RGD
Ensembl
PMID:18590716 GO_REF:0000107, MGI:MGI:3806189 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO MGI:MGI:2449045 (MGI:MGI:2448211|PMID:12514105) RGD PMID:12514105 MGI:MGI:2448211 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO
ISS
MGI:MGI:2429649 (MGI:MGI:2667289|PMID:12842915)
GO_REF:0000024
RGD
UniProt
PMID:12842915 GO_REF:0000024, MGI:MGI:2667289 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tbr1 T-box brain transcription factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:47,677,720...47,685,902
Ensembl chr 3:47,677,720...47,685,902
JBrowse link
G Tbx1 T-box transcription factor 1 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
MGI:MGI:1351209|MGI:MGI:2179191 (MGI:MGI:3039048|PMID:15084464), (MGI:MGI:3044254|PMID:15064766)
UniProt
RGD
PMID:15064766, PMID:15084464, PMID:21873635 GO_REF:0000024, MGI:MGI:3039048, MGI:MGI:3044254, RGD:13792537 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Tbx10 T-box transcription factor 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:219,237,204...219,246,480
Ensembl chr 1:219,243,447...219,246,262
JBrowse link
G Tbx15 T-box transcription factor 15 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:201,289,042...201,390,752
Ensembl chr 2:201,289,357...201,390,745
JBrowse link
G Tbx18 T-box transcription factor 18 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:95,359,354...95,387,363
Ensembl chr 8:95,359,354...95,387,363
JBrowse link
G Tbx19 T-box transcription factor 19 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:83,403,263...83,426,305
Ensembl chr13:83,403,264...83,425,641
JBrowse link
G Tbx2 T-box transcription factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:73,278,932...73,290,764
Ensembl chr10:73,279,119...73,289,921
JBrowse link
G Tbx20 T-box transcription factor 20 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:25,849,394...25,904,570
Ensembl chr 8:25,850,962...25,904,570
JBrowse link
G Tbx21 T-box transcription factor 21 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:85,032,799...85,049,331
Ensembl chr10:85,032,799...85,049,331
JBrowse link
G Tbx22 T-box transcription factor 22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:78,731,738...78,782,542
Ensembl chr  X:78,769,419...78,782,542
JBrowse link
G Tbx3 T-box transcription factor 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
G Tbx4 T-box transcription factor 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:73,331,864...73,362,784
Ensembl chr10:73,333,119...73,362,783
JBrowse link
G Tbx5 T-box transcription factor 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:42,059,688...42,148,226
Ensembl chr12:42,097,626...42,148,146
JBrowse link
G Tbx6 T-box transcription factor 6 ISO
IBA
MGI:MGI:2447721 (MGI:MGI:2447720|PMID:9490412)
PMID:21873635
RGD PMID:9490412, PMID:21873635 MGI:MGI:2447720, RGD:13792537 NCBI chr 1:198,214,797...198,218,706
Ensembl chr 1:198,214,797...198,218,706
JBrowse link
G Tbxt T-box transcription factor T IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:52,887,067...52,900,691
Ensembl chr 1:52,887,067...52,894,832
JBrowse link
G Tead4 TEA domain transcription factor 4 ISO MGI:MGI:106907 (MGI:MGI:3770613|PMID:18083014) RGD PMID:18083014 MGI:MGI:3770613 NCBI chr 4:161,542,566...161,619,848
Ensembl chr 4:161,540,130...161,587,222
JBrowse link
G Tlx3 T-cell leukemia, homeobox 3 ISO MGI:MGI:2180105|MGI:MGI:98769 (MGI:MGI:3044254|PMID:15064766) RGD PMID:15064766 MGI:MGI:3044254 NCBI chr10:18,128,869...18,131,745
Ensembl chr10:18,129,408...18,131,562
JBrowse link
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx1 distal-less homeobox 1 ISO
IEA
MGI:MGI:94902 (MGI:MGI:3775335|PMID:17678855)
GO_REF:0000107
RGD
Ensembl
PMID:17678855 GO_REF:0000107, MGI:MGI:3775335 NCBI chr 3:58,164,931...58,169,521
Ensembl chr 3:58,164,931...58,169,521
JBrowse link
G Dlx2 distal-less homeobox 2 ISO
IEA
MGI:MGI:94901 (MGI:MGI:3775335|PMID:17678855)
GO_REF:0000107
RGD
Ensembl
PMID:17678855 GO_REF:0000107, MGI:MGI:3775335 NCBI chr 3:58,180,088...58,181,971
Ensembl chr 3:58,180,088...58,181,971
JBrowse link
commitment of neuronal cell to specific neuron type in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO MGI:MGI:1857470 (MGI:MGI:5439194|PMID:22991444) RGD PMID:22991444 MGI:MGI:5439194 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
G Bcl11b BAF chromatin remodeling complex subunit BCL11B ISO MGI:MGI:2679336 (MGI:MGI:5464968|PMID:23144223) RGD PMID:23144223 MGI:MGI:5464968 NCBI chr 6:131,834,097...131,927,251
Ensembl chr 6:131,834,097...131,926,272
JBrowse link
G Fezf2 Fez family zinc finger 2 ISO MGI:MGI:2679336|MGI:MGI:3046867|MGI:MGI:3525887 (MGI:MGI:5140686|PMID:21338885), (MGI:MGI:5464968|PMID:23144223) RGD PMID:21338885, PMID:23144223 MGI:MGI:5140686, MGI:MGI:5464968 NCBI chr15:12,825,333...12,831,496
Ensembl chr15:12,827,707...12,831,496
JBrowse link
G Gata2 GATA binding protein 2 ISO MGI:MGI:4818492 (MGI:MGI:5439194|PMID:22991444) RGD PMID:22991444 MGI:MGI:5439194 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Pax6 paired box 6 ISO
IEA
MGI:MGI:1856158 (MGI:MGI:1928687|PMID:11124115)
GO_REF:0000107
RGD
Ensembl
PMID:11124115 GO_REF:0000107, MGI:MGI:1928687 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
G Satb2 SATB homeobox 2 ISO MGI:MGI:107404|MGI:MGI:1859823|MGI:MGI:1929913|MGI:MGI:3692768 (MGI:MGI:5464968|PMID:23144223) RGD PMID:23144223 MGI:MGI:5464968 NCBI chr 9:63,456,877...63,642,193
Ensembl chr 9:63,456,783...63,641,400
JBrowse link
G Tbr1 T-box brain transcription factor 1 ISO
IBA
MGI:MGI:2679336 (MGI:MGI:5464968|PMID:23144223)
PMID:21873635
RGD PMID:23144223, PMID:21873635 MGI:MGI:5464968, RGD:13792537 NCBI chr 3:47,677,720...47,685,902
Ensembl chr 3:47,677,720...47,685,902
JBrowse link
ectodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elf5 E74 like ETS transcription factor 5 ISO MGI:MGI:95456 (MGI:MGI:5616945|PMID:25446535) RGD PMID:25446535 MGI:MGI:5616945 NCBI chr 3:93,333,514...93,374,454
Ensembl chr 3:93,351,619...93,371,656
JBrowse link
G Ets2 ETS proto-oncogene 2, transcription factor ISO MGI:MGI:1335079 (MGI:MGI:5616945|PMID:25446535) RGD PMID:25446535 MGI:MGI:5616945 NCBI chr11:36,075,709...36,092,495
Ensembl chr11:36,075,709...36,092,495
JBrowse link
G Pou5f1 POU class 5 homeobox 1 ISO (MGI:MGI:1355046|PMID:10742100) RGD PMID:10742100 MGI:MGI:1355046 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
endocardial cushion cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 ISO
IEA
(PMID:19506109)
GO_REF:0000107
RGD
Ensembl
PMID:19506109 GO_REF:0000107 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
JBrowse link
endodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc73 cell division cycle 73 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3849235|PMID:19345177)
Ensembl
UniProt
RGD
PMID:19345177 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3849235 NCBI chr13:60,403,771...60,496,511
Ensembl chr13:60,403,771...60,496,511
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
MGI:MGI:1858007|MGI:MGI:2148567 (MGI:MGI:3625553|PMID:12194849)
GO_REF:0000107
RGD
Ensembl
PMID:12194849 GO_REF:0000107, MGI:MGI:3625553 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component ISO (MGI:MGI:3849235|PMID:19345177) RGD PMID:19345177 MGI:MGI:3849235 NCBI chr 1:175,839,140...175,869,167
Ensembl chr 1:175,839,108...175,869,165
JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component ISO
ISS
(MGI:MGI:3849235|PMID:19345177)
GO_REF:0000024
RGD
UniProt
PMID:19345177 GO_REF:0000024, MGI:MGI:3849235 NCBI chr 8:82,380,906...82,405,293
Ensembl chr 8:82,380,757...82,405,644
JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component ISO
ISS
(MGI:MGI:3849235|PMID:19345177)
GO_REF:0000024
RGD
UniProt
PMID:19345177 GO_REF:0000024, MGI:MGI:3849235 NCBI chr 1:85,362,421...85,367,999
Ensembl chr 1:85,362,268...85,368,031
JBrowse link
G Pou5f1 POU class 5 homeobox 1 ISO (MGI:MGI:1355046|PMID:10742100) RGD PMID:10742100 MGI:MGI:1355046 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
G Rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) ISO (MGI:MGI:3849235|PMID:19345177) RGD PMID:19345177 MGI:MGI:3849235 NCBI chr 3:111,478,350...111,537,941
Ensembl chr 3:111,478,382...111,537,941
JBrowse link
endodermal cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata6 GATA binding protein 6 ISO
IEA
(MGI:MGI:4442295|PMID:20308546)
GO_REF:0000107
RGD
Ensembl
PMID:20308546 GO_REF:0000107, MGI:MGI:4442295 NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
JBrowse link
G Sox17 SRY-box transcription factor 17 ISO (MGI:MGI:4442295|PMID:20308546) RGD PMID:20308546 MGI:MGI:4442295 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin ISO
IBA
MGI:MGI:3774028 (MGI:MGI:4887279|PMID:21245162)
PMID:21873635
RGD PMID:21245162, PMID:21873635 MGI:MGI:4887279, RGD:13792537 NCBI chr 8:127,144,367...127,152,618
Ensembl chr 8:127,144,903...127,151,493
JBrowse link
G Hnf1b HNF1 homeobox B ISO MGI:MGI:1857856 (MGI:MGI:3807614|PMID:18635606) RGD PMID:18635606 MGI:MGI:3807614 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Nanog Nanog homeobox ISO (PMID:20713518) RGD PMID:20713518 NCBI chr 4:155,531,906...155,539,268
Ensembl chr 4:155,531,906...155,539,268
JBrowse link
G Pou5f1 POU class 5 homeobox 1 ISO (PMID:20713518) RGD PMID:20713518 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO (PMID:21245162) RGD PMID:21245162 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
endothelial cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa13 homeo box A13 ISO MGI:MGI:2152356 (MGI:MGI:3797428|PMID:18483557) RGD PMID:18483557 MGI:MGI:3797428 Ensembl chr 4:82,228,017...82,229,397 JBrowse link
endothelial tip cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5466218|PMID:22282195)
Ensembl
UniProt
RGD
PMID:22282195 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5466218 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
eosinophil fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata1 GATA binding protein 1 ISO (PMID:12045236) RGD PMID:12045236 NCBI chr  X:15,273,937...15,281,759
Ensembl chr  X:15,378,789...15,382,066
JBrowse link
G Gata2 GATA binding protein 2 ISO (PMID:12045236) RGD PMID:12045236 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
epidermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptch1 patched 1 ISO MGI:MGI:1095405 (MGI:MGI:5571965|PMID:24492243) RGD PMID:24492243 MGI:MGI:5571965 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Ptch2 patched 2 ISO MGI:MGI:105373 (MGI:MGI:5571965|PMID:24492243) RGD PMID:24492243 MGI:MGI:5571965 NCBI chr 5:135,962,252...135,983,816
Ensembl chr 5:135,962,911...135,983,816
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO MGI:MGI:1926500|MGI:MGI:3583755 (MGI:MGI:3689772|PMID:17079689) RGD PMID:17079689 MGI:MGI:3689772 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
epithelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox ISO
IEA
MGI:MGI:3803178 (MGI:MGI:5426506|PMID:22387004)
GO_REF:0000107
RGD
Ensembl
PMID:22387004 GO_REF:0000107, MGI:MGI:5426506 NCBI chr  X:62,363,757...62,376,139
Ensembl chr  X:62,363,757...62,376,143
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO MGI:MGI:1931521 (MGI:MGI:4352984|PMID:19407216) RGD PMID:19407216 MGI:MGI:4352984 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Gata4 GATA binding protein 4 ISO MGI:MGI:3053826|MGI:MGI:3526854 (MGI:MGI:3696911|PMID:16940177) RGD PMID:16940177 MGI:MGI:3696911 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
JBrowse link
establishment of neuroblast polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dock7 dedicator of cytokinesis 7 ISO (PMID:16982419) RGD PMID:16982419 NCBI chr 5:117,595,194...117,780,844
Ensembl chr 5:117,596,136...117,780,777
JBrowse link
G Fgf13 fibroblast growth factor 13 NOT ISO
ISS
(MGI:MGI:5431268|PMID:22726441)
GO_REF:0000024
RGD
UniProt
PMID:22726441 GO_REF:0000024, MGI:MGI:5431268 NCBI chr  X:142,053,648...142,589,274
Ensembl chr  X:142,053,654...142,248,369
JBrowse link
G Rab10 RAB10, member RAS oncogene family IMP PMID:21856246 UniProt PMID:21856246 RGD:8553614 NCBI chr 6:27,668,387...27,721,120
Ensembl chr 6:27,668,403...27,721,120
JBrowse link
eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otx2 orthodenticle homeobox 2 ISO MGI:MGI:2178753 (MGI:MGI:2680889|PMID:14625556) RGD PMID:14625556 MGI:MGI:2680889 NCBI chr15:25,500,037...25,511,619
Ensembl chr15:25,502,019...25,505,691
JBrowse link
forebrain neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx6 LIM homeobox 6 ISO MGI:MGI:108067 (MGI:MGI:3794908|PMID:18339674) RGD PMID:18339674 MGI:MGI:3794908 NCBI chr 3:15,409,349...15,433,504
Ensembl chr 3:15,411,939...15,433,252
JBrowse link
G Nkx2-1 NK2 homeobox 1 ISO
IEA
MGI:MGI:1306803|MGI:MGI:1857494 (MGI:MGI:3794908|PMID:18339674)
GO_REF:0000107
RGD
Ensembl
PMID:18339674 GO_REF:0000107, MGI:MGI:3794908 NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
JBrowse link
G Tfap2c transcription factor AP-2 gamma ISO MGI:MGI:2176695 (MGI:MGI:4397655|PMID:19749747) RGD PMID:19749747 MGI:MGI:4397655 NCBI chr 3:170,550,314...170,558,197
Ensembl chr 3:170,550,314...170,558,194
JBrowse link
gamma-delta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Olr292 olfactory receptor 292 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:212,714,092...212,886,388
Ensembl chr 1:212,885,464...212,886,381
JBrowse link
ganglion mother cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntf4 neurotrophin 4 ISO
ISS
MGI:MGI:1933845 (MGI:MGI:1354095|PMID:10681461) RGD PMID:10681461, PMID:10681461 MGI:MGI:1354095, RGD:8554690 NCBI chr 1:101,405,314...101,408,145
Ensembl chr 1:101,405,314...101,408,145
JBrowse link
glial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes5 hes family bHLH transcription factor 5 ISO
ISS
MGI:MGI:2149674 (MGI:MGI:1859063|PMID:10821751)
GO_REF:0000024
RGD
UniProt
PMID:10821751 GO_REF:0000024, MGI:MGI:1859063 NCBI chr 5:172,364,421...172,365,188
Ensembl chr 5:172,364,421...172,365,188
JBrowse link
G Nfe2l1 nuclear factor, erythroid 2-like 1 ISO (MGI:MGI:5502794|PMID:23840004) RGD PMID:23840004 MGI:MGI:5502794 NCBI chr10:84,686,762...84,699,313
Ensembl chr10:84,682,460...84,698,886
JBrowse link
G Nrg1 neuregulin 1 ISO
IEA
(MGI:MGI:4845793|PMID:21068328)
GO_REF:0000107
RGD
Ensembl
PMID:21068328 GO_REF:0000107, MGI:MGI:4845793 NCBI chr16:62,969,573...64,065,063
Ensembl chr16:63,837,216...64,057,434
JBrowse link
glial cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 ISO
IEA
(MGI:MGI:3722716|PMID:17706960)
GO_REF:0000107
RGD
Ensembl
PMID:17706960 GO_REF:0000107, MGI:MGI:3722716 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ntf3 neurotrophin 3 ISO MGI:MGI:1933844 (MGI:MGI:1335255|PMID:10384880) RGD PMID:10384880 MGI:MGI:1335255 NCBI chr 4:158,636,883...158,705,886
Ensembl chr 4:158,636,884...158,705,886
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO MGI:MGI:2176173|MGI:MGI:3605892 (MGI:MGI:3611670|PMID:16330018) RGD PMID:16330018 MGI:MGI:3611670 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468
JBrowse link
inner cell mass cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 ISO MGI:MGI:1354386 (MGI:MGI:5502808|PMID:23824537) RGD PMID:23824537 MGI:MGI:5502808 NCBI chr 1:1,784,078...1,817,310
Ensembl chr 1:1,784,078...1,817,310
JBrowse link
G Lats2 large tumor suppressor kinase 2 ISO MGI:MGI:1333883 (MGI:MGI:5502808|PMID:23824537) RGD PMID:23824537 MGI:MGI:5502808 NCBI chr15:37,943,609...37,995,175
Ensembl chr15:37,943,609...37,983,882
JBrowse link
G Prdm14 PR/SET domain 14 ISO (MGI:MGI:5528721|PMID:24183668) RGD PMID:24183668 MGI:MGI:5528721 NCBI chr 5:5,710,076...5,730,560
Ensembl chr 5:5,710,392...5,730,560
JBrowse link
lateral inhibition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:3823133|PMID:18997111), (MGI:MGI:5296438|PMID:21915337)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18997111, PMID:21915337 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3823133, MGI:MGI:5296438 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO
IEA
MGI:MGI:2149672 (MGI:MGI:1855903|PMID:10804175)
GO_REF:0000107
RGD
Ensembl
PMID:10804175 GO_REF:0000107, MGI:MGI:1855903 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Tm2d3 TM2 domain containing 3 ISO FB:FBgn0000077 (PMID:27764101) RGD PMID:27764101 NCBI chr 1:126,573,474...126,595,778
Ensembl chr 1:126,586,543...126,595,603
JBrowse link
lymphatic endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdpn podoplanin ISO
ISS
(MGI:MGI:4453945|PMID:20110424)
GO_REF:0000024
RGD
UniProt
PMID:20110424 GO_REF:0000024, MGI:MGI:4453945 NCBI chr 5:161,947,137...161,981,441
Ensembl chr 5:161,947,137...161,981,441
JBrowse link
maintenance of imprinting at mating-type locus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp445 zinc finger protein 445 ISO UniProtKB:Q8C6P8 (MGI:MGI:6284037|PMID:30602440) RGD PMID:30602440 MGI:MGI:6284037 NCBI chr 8:131,885,119...131,904,303
Ensembl chr 8:131,888,047...131,899,023
JBrowse link
G Zfp57 zinc finger protein 57 ISO UniProtKB:Q8R2V3 (MGI:MGI:6284037|PMID:30602440) RGD PMID:30602440 MGI:MGI:6284037 NCBI chr20:2,014,177...2,020,488
Ensembl chr20:2,014,170...2,020,537
JBrowse link
mesodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nanog Nanog homeobox ISO MGI:MGI:109452 (MGI:MGI:3654744|PMID:16801560) RGD PMID:16801560 MGI:MGI:3654744 NCBI chr 4:155,531,906...155,539,268
Ensembl chr 4:155,531,906...155,539,268
JBrowse link
G Pou5f1 POU class 5 homeobox 1 ISO (MGI:MGI:1355046|PMID:10742100) RGD PMID:10742100 MGI:MGI:1355046 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
G Smad1 SMAD family member 1 ISO
IEA
MGI:MGI:1919200 (MGI:MGI:3654744|PMID:16801560)
GO_REF:0000107
RGD
Ensembl
PMID:16801560 GO_REF:0000107, MGI:MGI:3654744 NCBI chr19:32,182,942...32,248,694
Ensembl chr19:32,188,267...32,248,684
JBrowse link
mesodermal cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO
IEA
MGI:MGI:1857137 (MGI:MGI:76261|PMID:7657163)
GO_REF:0000107
RGD
Ensembl
PMID:7657163 GO_REF:0000107, MGI:MGI:76261 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO (MGI:MGI:3768605|PMID:17785448) RGD PMID:17785448 MGI:MGI:3768605 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Hoxa11 homeobox A11 ISO (MGI:MGI:3768605|PMID:17785448) RGD PMID:17785448 MGI:MGI:3768605 NCBI chr 4:82,296,888...82,301,419
Ensembl chr 4:82,298,152...82,300,503
Ensembl chr 4:82,298,152...82,300,503
JBrowse link
G Pax2 paired box 2 ISO
ISS
(MGI:MGI:3768605|PMID:17785448)
GO_REF:0000024
RGD
UniProt
PMID:17785448 GO_REF:0000024, MGI:MGI:3768605 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Six2 SIX homeobox 2 ISO (MGI:MGI:3768605|PMID:17785448) RGD PMID:17785448 MGI:MGI:3768605 NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
JBrowse link
muscle cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:1859647|MGI:MGI:3629660 (MGI:MGI:3578606|PMID:15800000) RGD PMID:15800000 MGI:MGI:3578606 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Tbx1 T-box transcription factor 1 ISO
ISS
MGI:MGI:2179190 (MGI:MGI:3809316|PMID:18816853)
GO_REF:0000024
RGD
UniProt
PMID:18816853 GO_REF:0000024, MGI:MGI:3809316 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
muscle cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C ISO
IEA
MGI:MGI:3718323 (MGI:MGI:3763703|PMID:17786239)
GO_REF:0000107
RGD
Ensembl
PMID:17786239 GO_REF:0000107, MGI:MGI:3763703 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Tbx2 T-box transcription factor 2 ISO MGI:MGI:3505715 (MGI:MGI:3487212|PMID:15459098) RGD PMID:15459098 MGI:MGI:3487212 NCBI chr10:73,278,932...73,290,764
Ensembl chr10:73,279,119...73,289,921
JBrowse link
muscle cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myl2 myosin light chain 2 ISO
IEA
(MGI:MGI:67939|PMID:1379240)
GO_REF:0000107
RGD
Ensembl
PMID:1379240 GO_REF:0000107, MGI:MGI:67939 NCBI chr12:39,951,863...39,959,065
Ensembl chr12:39,951,987...39,958,239
JBrowse link
myoblast fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epas1 endothelial PAS domain protein 1 ISO
IEA
(MGI:MGI:4867337|PMID:21106753)
GO_REF:0000107
RGD
Ensembl
PMID:21106753 GO_REF:0000107, MGI:MGI:4867337 NCBI chr 6:10,306,508...10,385,239
Ensembl chr 6:10,306,405...10,387,265
JBrowse link
G Pitx1 paired-like homeodomain 1 ISO MGI:MGI:2384494 (MGI:MGI:3706272|PMID:17384148) RGD PMID:17384148 MGI:MGI:3706272 NCBI chr17:8,873,184...8,884,428
Ensembl chr17:8,878,270...8,884,423
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO (PMID:10937998)
(MGI:MGI:3758508|PMID:10937998)
RGD PMID:10937998 MGI:MGI:3758508 NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514
Ensembl chr 1:276,659,542...276,730,514
JBrowse link
myoblast fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myod1 myogenic differentiation 1 ISO
ISS
IEA
(MGI:MGI:2651740|PMID:12486129)
GO_REF:0000107
RGD
Ensembl
PMID:12486129, PMID:12486129 GO_REF:0000107, MGI:MGI:2651740, RGD:8554648 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 ISO (PMID:20559569) RGD PMID:20559569 NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607
JBrowse link
negative regulation of cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glis1 GLIS family zinc finger 1 ISO (MGI:MGI:6294234|PMID:30544251) RGD PMID:30544251 MGI:MGI:6294234 NCBI chr 5:127,043,344...127,233,395
Ensembl chr 5:127,160,495...127,233,078
JBrowse link
G Nanog Nanog homeobox ISO MGI:MGI:109452 (MGI:MGI:3654744|PMID:16801560) RGD PMID:16801560 MGI:MGI:3654744 NCBI chr 4:155,531,906...155,539,268
Ensembl chr 4:155,531,906...155,539,268
JBrowse link
G Nkx6-2 NK6 homeobox 2 ISO MGI:MGI:2651850 (MGI:MGI:2150481|PMID:11567614) RGD PMID:11567614 MGI:MGI:2150481 NCBI chr 1:211,922,389...211,923,929
Ensembl chr 1:211,922,389...211,923,929
JBrowse link
G Sostdc1 sclerostin domain containing 1 ISO MGI:MGI:3604658 (MGI:MGI:5319554|PMID:22509524) RGD PMID:22509524 MGI:MGI:5319554 NCBI chr 6:55,812,820...55,816,994
Ensembl chr 6:55,812,747...55,817,066
JBrowse link
G Spdef SAM pointed domain containing ets transcription factor ISO MGI:MGI:4398888 (MGI:MGI:4397649|PMID:19759516) RGD PMID:19759516 MGI:MGI:4397649 NCBI chr20:7,292,823...7,308,053
Ensembl chr20:7,292,824...7,307,284
JBrowse link
negative regulation of cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 ISO
IEA
MGI:MGI:2149672 (MGI:MGI:2136156|PMID:11425898)
GO_REF:0000107
RGD
Ensembl
PMID:11425898 GO_REF:0000107, MGI:MGI:2136156 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
negative regulation of cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfi1 growth factor independent 1 transcriptional repressor ISO MGI:MGI:2449921 (MGI:MGI:3606816|PMID:16230531) RGD PMID:16230531 MGI:MGI:3606816 NCBI chr14:3,058,035...3,073,332
Ensembl chr14:3,058,993...3,068,371
JBrowse link
negative regulation of ectodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd7 frizzled class receptor 7 ISO (PMID:18681827) RGD PMID:18681827 NCBI chr 9:66,305,731...66,308,550
Ensembl chr 9:66,305,731...66,308,550
JBrowse link
negative regulation of endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior bHLH transcription factor 1 ISO (MGI:MGI:4441249|PMID:18593560) RGD PMID:18593560 MGI:MGI:4441249 NCBI chr 1:141,532,390...141,533,908
Ensembl chr 1:141,532,390...141,533,908
JBrowse link
negative regulation of heart induction by canonical Wnt signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3a Wnt family member 3A ISO (PMID:19736317) RGD PMID:19736317 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
negative regulation of mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 ISO (PMID:20559569) RGD PMID:20559569 NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 ISO (MGI:MGI:4441249|PMID:18593560) RGD PMID:18593560 MGI:MGI:4441249 NCBI chr 1:141,532,390...141,533,908
Ensembl chr 1:141,532,390...141,533,908
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO MGI:MGI:98956 (MGI:MGI:3711603|PMID:17462603) RGD PMID:17462603 MGI:MGI:3711603 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
negative regulation of retinal cone cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casz1 castor zinc finger 1 ISO MGI:MGI:3052661|MGI:MGI:4841554 (MGI:MGI:5629913|PMID:25654255) RGD PMID:25654255 MGI:MGI:5629913 NCBI chr 5:165,625,119...165,777,053
Ensembl chr 5:165,724,027...165,774,616
JBrowse link
negative regulation of T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Loxl3 lysyl oxidase-like 3 ISO (MGI:MGI:5825383|PMID:28065600) RGD PMID:28065600 MGI:MGI:5825383 NCBI chr 4:113,866,782...113,883,713
Ensembl chr 4:113,866,804...113,883,477
JBrowse link
G Tbx21 T-box transcription factor 21 ISO (MGI:MGI:4868293|PMID:21151104) RGD PMID:21151104 MGI:MGI:4868293 NCBI chr10:85,032,799...85,049,331
Ensembl chr10:85,032,799...85,049,331
JBrowse link
G Tnfsf18 TNF superfamily member 18 ISO (MGI:MGI:5551556|PMID:24107315) RGD PMID:24107315 MGI:MGI:5551556 NCBI chr13:79,378,412...79,388,687
Ensembl chr13:79,378,733...79,388,498
JBrowse link
neural crest cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp1 secreted frizzled-related protein 1 ISO
IEA
MGI:MGI:3045799 (MGI:MGI:4437369|PMID:20130188)
GO_REF:0000107
RGD
Ensembl
PMID:20130188 GO_REF:0000107, MGI:MGI:4437369 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
neural crest cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsc goosecoid homeobox ISO (PMID:24290375) RGD PMID:24290375 NCBI chr 6:128,147,181...128,149,220
Ensembl chr 6:128,147,181...128,149,220
JBrowse link
neuroblast fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO MGI:MGI:1857470 (MGI:MGI:1926546|PMID:11032813), (MGI:MGI:2389286|PMID:12397111) RGD PMID:11032813, PMID:12397111 MGI:MGI:1926546, MGI:MGI:2389286 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 ISS
ISO
GO_REF:0000024
MGI:MGI:1857470|MGI:MGI:2151057 (MGI:MGI:2651973|PMID:12629181), (MGI:MGI:3587461|PMID:16020526), (MGI:MGI:3639800|PMID:16715081), (MGI:MGI:4353883|PMID:19191219), (MGI:MGI:5897542|PMID:24243019)
UniProt
RGD
PMID:12629181, PMID:16020526, PMID:16715081, PMID:19191219, PMID:24243019 GO_REF:0000024, MGI:MGI:2651973, MGI:MGI:3587461, MGI:MGI:3639800, MGI:MGI:4353883, MGI:MGI:5897542 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO
IEA
MGI:MGI:2158495 (MGI:MGI:3761972|PMID:17698011)
GO_REF:0000107
RGD
Ensembl
PMID:17698011 GO_REF:0000107, MGI:MGI:3761972 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Epop elongin BC and polycomb repressive complex 2 associated protein ISO
IBA
(MGI:MGI:5507920|PMID:23180766)
PMID:21873635
RGD PMID:23180766, PMID:21873635 MGI:MGI:5507920, RGD:13792537 NCBI chr10:85,573,369...85,574,889
Ensembl chr10:85,573,369...85,574,889
JBrowse link
G Foxn4 forkhead box N4 ISO MGI:MGI:96919 (MGI:MGI:3587461|PMID:16020526) RGD PMID:16020526 MGI:MGI:3587461 NCBI chr12:48,101,012...48,121,281
Ensembl chr12:48,101,673...48,121,270
JBrowse link
G Gata2 GATA binding protein 2 ISO MGI:MGI:4818492 (MGI:MGI:3827070|PMID:19088086) RGD PMID:19088086 MGI:MGI:3827070 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Gbx1 gastrulation brain homeobox 1 ISO (MGI:MGI:5511092|PMID:24010020) RGD PMID:24010020 MGI:MGI:5511092 NCBI chr 4:7,173,961...7,200,752
Ensembl chr 4:7,173,961...7,200,752
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:1856276 (MGI:MGI:3610448|PMID:16168404) RGD PMID:16168404 MGI:MGI:3610448 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Gsx1 GS homeobox 1 ISO MGI:MGI:95843 (MGI:MGI:3639800|PMID:16715081) RGD PMID:16715081 MGI:MGI:3639800 NCBI chr12:9,605,873...9,607,168
Ensembl chr12:9,605,873...9,607,168
JBrowse link
G Gsx2 GS homeobox 2 ISO MGI:MGI:95842 (MGI:MGI:3639800|PMID:16715081) RGD PMID:16715081 MGI:MGI:3639800 NCBI chr14:35,650,985...35,652,709
Ensembl chr14:35,650,985...35,652,709
JBrowse link
G Id2 inhibitor of DNA binding 2 ISO
ISS
(MGI:MGI:4821067|PMID:17681138)
GO_REF:0000024
RGD
UniProt
PMID:17681138 GO_REF:0000024, MGI:MGI:4821067 NCBI chr 6:44,360,077...44,361,908
Ensembl chr 6:44,348,501...44,363,915
JBrowse link
G Isl1 ISL LIM homeobox 1 ISO MGI:MGI:109156 (MGI:MGI:3041365|PMID:14766174) RGD PMID:14766174 MGI:MGI:3041365 NCBI chr 2:48,488,911...48,501,217
Ensembl chr 2:48,487,736...48,501,436
JBrowse link
G Isl2 ISL LIM homeobox 2 ISO MGI:MGI:101791|MGI:MGI:3046260 (MGI:MGI:3041365|PMID:14766174) RGD PMID:14766174 MGI:MGI:3041365 NCBI chr 8:60,117,565...60,122,716
Ensembl chr 8:60,117,729...60,122,211
JBrowse link
G Lbx1 ladybird homeobox 1 ISO MGI:MGI:1352738 (MGI:MGI:2179904|PMID:12062039) RGD PMID:12062039 MGI:MGI:2179904 NCBI chr 1:264,973,315...264,975,132
Ensembl chr 1:264,973,315...264,975,132
JBrowse link
G Myt1l myelin transcription factor 1-like ISS
ISO
GO_REF:0000024
(MGI:MGI:5897487|PMID:28379941), (MGI:MGI:5897542|PMID:24243019)
UniProt
RGD
PMID:24243019, PMID:28379941 GO_REF:0000024, MGI:MGI:5897487, MGI:MGI:5897542 NCBI chr 6:48,452,385...48,843,443
Ensembl chr 6:48,452,369...48,857,936
JBrowse link
G Nkx2-1 NK2 homeobox 1 ISO MGI:MGI:3653645 (MGI:MGI:3834782|PMID:18786356), (MGI:MGI:4437145|PMID:20181579) RGD PMID:18786356, PMID:20181579 MGI:MGI:3834782, MGI:MGI:4437145 NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
JBrowse link
G Notch1 notch receptor 1 ISO MGI:MGI:99460 (MGI:MGI:3604921|PMID:16120638) RGD PMID:16120638 MGI:MGI:3604921 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Notch3 notch receptor 3 ISO
IEA
MGI:MGI:97363 (MGI:MGI:3604921|PMID:16120638)
GO_REF:0000107
RGD
Ensembl
PMID:16120638 GO_REF:0000107, MGI:MGI:3604921 NCBI chr 7:14,138,495...14,189,688
Ensembl chr 7:14,138,495...14,189,688
JBrowse link
G Nrg1 neuregulin 1 ISO
IEA
(MGI:MGI:2136155|PMID:11425901)
GO_REF:0000107
RGD
Ensembl
PMID:11425901 GO_REF:0000107, MGI:MGI:2136155 NCBI chr16:62,969,573...64,065,063
Ensembl chr16:63,837,216...64,057,434
JBrowse link
G Olig1 oligodendrocyte transcription factor 1 ISO
IEA
MGI:MGI:2179311 (MGI:MGI:2177979|PMID:11955448)
GO_REF:0000107
RGD
Ensembl
PMID:11955448 GO_REF:0000107, MGI:MGI:2177979 NCBI chr11:31,428,377...31,430,519
Ensembl chr11:31,428,358...31,430,517
JBrowse link
G Olig2 oligodendrocyte transcription factor 2 ISO MGI:MGI:2179312 (MGI:MGI:2177979|PMID:11955448) RGD PMID:11955448 MGI:MGI:2177979 NCBI chr11:31,389,514...31,392,890
Ensembl chr11:31,389,514...31,392,890
JBrowse link
G Otx2 orthodenticle homeobox 2 ISO MGI:MGI:2178753|MGI:MGI:2446434|MGI:MGI:2661065|MGI:MGI:3665330 (MGI:MGI:3611719|PMID:16339193), (MGI:MGI:5689191|PMID:26166575) RGD PMID:16339193, PMID:26166575 MGI:MGI:3611719, MGI:MGI:5689191 NCBI chr15:25,500,037...25,511,619
Ensembl chr15:25,502,019...25,505,691
JBrowse link
G Pax3 paired box 3 ISO MGI:MGI:97491 (MGI:MGI:1321412|PMID:9858722) RGD PMID:9858722 MGI:MGI:1321412 NCBI chr 9:84,004,004...84,101,226
Ensembl chr 9:84,005,183...84,101,172
JBrowse link
G Pax7 paired box 7 ISO MGI:MGI:97487 (MGI:MGI:1321412|PMID:9858722) RGD PMID:9858722 MGI:MGI:1321412 NCBI chr 5:158,211,001...158,313,510
Ensembl chr 5:158,214,616...158,313,426
JBrowse link
G Pou3f2 POU class 3 homeobox 2 ISO
ISS
(MGI:MGI:5897542|PMID:24243019)
GO_REF:0000024
RGD
UniProt
PMID:24243019 GO_REF:0000024, MGI:MGI:5897542 NCBI chr 5:36,677,452...36,683,356
Ensembl chr 5:36,681,528...36,683,356
JBrowse link
G Ptf1a pancreas associated transcription factor 1a ISO (MGI:MGI:3590363|PMID:16039563) RGD PMID:16039563 MGI:MGI:3590363 NCBI chr17:86,199,623...86,201,477
Ensembl chr17:86,199,623...86,201,477
JBrowse link
G Runx1 RUNX family transcription factor 1 ISO (MGI:MGI:5641108|PMID:25834056) RGD PMID:25834056 MGI:MGI:5641108 NCBI chr11:32,765,147...33,003,061
Ensembl chr11:32,769,165...33,003,021
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
ISS
IEA
MGI:MGI:1934268 (MGI:MGI:3608263|PMID:16221724)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:16221724 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3608263 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smad4 SMAD family member 4 ISO
IEA
MGI:MGI:2386393|MGI:MGI:2386570 (MGI:MGI:3761972|PMID:17698011)
GO_REF:0000107
RGD
Ensembl
PMID:17698011 GO_REF:0000107, MGI:MGI:3761972 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO MGI:MGI:3589809 (MGI:MGI:3664123|PMID:17015430) RGD PMID:17015430 MGI:MGI:3664123 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Tgfb2 transforming growth factor, beta 2 ISO (MGI:MGI:3588127|PMID:15744664) RGD PMID:15744664 MGI:MGI:3588127 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 ISO (MGI:MGI:3588127|PMID:15744664) RGD PMID:15744664 MGI:MGI:3588127 NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
JBrowse link
G Wnt1 Wnt family member 1 ISO MGI:MGI:2153126 (MGI:MGI:3611719|PMID:16339193) RGD PMID:16339193 MGI:MGI:3611719 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
JBrowse link
G Zfp521 zinc finger protein 521 ISO (MGI:MGI:5641108|PMID:25834056) RGD PMID:25834056 MGI:MGI:5641108 NCBI chr18:5,022,042...5,315,242
Ensembl chr18:5,032,029...5,314,585
JBrowse link
neuron fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 ISO MGI:MGI:3619134 (MGI:MGI:3664674|PMID:16892058) RGD PMID:16892058 MGI:MGI:3664674 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
JBrowse link
G Fezf2 Fez family zinc finger 2 ISO (MGI:MGI:5604297|PMID:24997765) RGD PMID:24997765 MGI:MGI:5604297 NCBI chr15:12,825,333...12,831,496
Ensembl chr15:12,827,707...12,831,496
JBrowse link
G Foxg1 forkhead box G1 ISO (MGI:MGI:5440366|PMID:22726835) RGD PMID:22726835 MGI:MGI:5440366 NCBI chr 6:69,971,227...69,974,037
Ensembl chr 6:69,971,227...69,974,037
JBrowse link
G Lbx1 ladybird homeobox 1 ISO MGI:MGI:1351209|MGI:MGI:2182635 (MGI:MGI:3607682|PMID:16234809) RGD PMID:16234809 MGI:MGI:3607682 NCBI chr 1:264,973,315...264,975,132
Ensembl chr 1:264,973,315...264,975,132
JBrowse link
G Otx2 orthodenticle homeobox 2 ISO MGI:MGI:2446434|MGI:MGI:2661065 (MGI:MGI:4360136|PMID:19592574) RGD PMID:19592574 MGI:MGI:4360136 NCBI chr15:25,500,037...25,511,619
Ensembl chr15:25,502,019...25,505,691
JBrowse link
G Prrx1 paired related homeobox 1 ISO (MGI:MGI:5486509|PMID:23447615) RGD PMID:23447615 MGI:MGI:5486509 NCBI chr13:81,147,038...81,215,559
Ensembl chr13:81,147,348...81,214,546
JBrowse link
G Wnt1 Wnt family member 1 ISO MGI:MGI:3046939 (MGI:MGI:3611719|PMID:16339193) RGD PMID:16339193 MGI:MGI:3611719 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
JBrowse link
neuron fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 ISS
ISO
GO_REF:0000024
MGI:MGI:1857470 (MGI:MGI:3639051|PMID:16469766), (MGI:MGI:5897542|PMID:24243019)
UniProt
RGD
PMID:16469766, PMID:24243019 GO_REF:0000024, MGI:MGI:3639051, MGI:MGI:5897542 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
G Dll1 delta like canonical Notch ligand 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3823133|PMID:18997111)
Ensembl
UniProt
RGD
PMID:18997111 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3823133 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
G Dmrta2 DMRT-like family A2 ISO (MGI:MGI:5013657|PMID:21576465) RGD PMID:21576465 MGI:MGI:5013657 NCBI chr 5:129,754,295...129,760,045
Ensembl chr 5:129,756,149...129,758,986
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 ISO MGI:MGI:4418499 (MGI:MGI:5577209|PMID:24584053) RGD PMID:24584053 MGI:MGI:5577209 NCBI chr20:4,576,033...4,592,980
Ensembl chr20:4,576,057...4,592,980
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO MGI:MGI:102780 (MGI:MGI:5319720|PMID:22513373) RGD PMID:22513373 MGI:MGI:5319720 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Fev FEV transcription factor, ETS family member ISO MGI:MGI:2449922 (MGI:MGI:4836772|PMID:20818386) RGD PMID:20818386 MGI:MGI:4836772 NCBI chr 9:82,142,981...82,146,855
Ensembl chr 9:82,142,981...82,146,874
JBrowse link
G Foxa1 forkhead box A1 ISO
IEA
MGI:MGI:1347476 (MGI:MGI:3720545|PMID:17596284)
GO_REF:0000107
RGD
Ensembl
PMID:17596284 GO_REF:0000107, MGI:MGI:3720545 NCBI chr 6:78,516,579...78,549,669
Ensembl chr 6:78,545,804...78,549,669
JBrowse link
G Foxa2 forkhead box A2 ISO MGI:MGI:1347472|MGI:MGI:2176222|MGI:MGI:2177337 (MGI:MGI:3720545|PMID:17596284), (MGI:MGI:3767119|PMID:17922007) RGD PMID:17596284, PMID:17922007 MGI:MGI:3720545, MGI:MGI:3767119 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
G Gsx2 GS homeobox 2 ISO MGI:MGI:2150162 (MGI:MGI:3579956|PMID:15930101) RGD PMID:15930101 MGI:MGI:3579956 NCBI chr14:35,650,985...35,652,709
Ensembl chr14:35,650,985...35,652,709
JBrowse link
G Isl1 ISL LIM homeobox 1 ISO
IBA
(MGI:MGI:3815381|PMID:18849985)
PMID:21873635
RGD PMID:18849985, PMID:21873635 MGI:MGI:3815381, RGD:13792537 NCBI chr 2:48,488,911...48,501,217
Ensembl chr 2:48,487,736...48,501,436
JBrowse link
G Isl2 ISL LIM homeobox 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:60,117,565...60,122,716
Ensembl chr 8:60,117,729...60,122,211
JBrowse link
G Myt1l myelin transcription factor 1-like ISS
ISO
GO_REF:0000024
(MGI:MGI:5897487|PMID:28379941), (MGI:MGI:5897542|PMID:24243019)
UniProt
RGD
PMID:24243019, PMID:28379941 GO_REF:0000024, MGI:MGI:5897487, MGI:MGI:5897542 NCBI chr 6:48,452,385...48,843,443
Ensembl chr 6:48,452,369...48,857,936
JBrowse link
G Nkx2-2 NK2 homeobox 2 ISO MGI:MGI:1932100|MGI:MGI:97451 (MGI:MGI:3611719|PMID:16339193), (MGI:MGI:4360136|PMID:19592574) RGD PMID:16339193, PMID:19592574 MGI:MGI:3611719, MGI:MGI:4360136 NCBI chr 3:141,408,460...141,419,083
Ensembl chr 3:141,408,798...141,411,170
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 IMP RGD PMID:15247919 RGD:2325628 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503
JBrowse link
G Pou3f2 POU class 3 homeobox 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5897542|PMID:24243019)
Ensembl
UniProt
RGD
PMID:24243019 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5897542 NCBI chr 5:36,677,452...36,683,356
Ensembl chr 5:36,681,528...36,683,356
JBrowse link
G Pou4f1 POU class 4 homeobox 1 ISO
IEA
(MGI:MGI:4367920|PMID:19877281), (MGI:MGI:4454975|PMID:20096094)
GO_REF:0000107
RGD
Ensembl
PMID:19877281, PMID:20096094 GO_REF:0000107, MGI:MGI:4367920, MGI:MGI:4454975 NCBI chr15:88,618,255...88,622,712
Ensembl chr15:88,620,470...88,622,413
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:MGI:109344 (MGI:MGI:5319720|PMID:22513373) RGD PMID:22513373 MGI:MGI:5319720 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Tlx3 T-cell leukemia, homeobox 3 ISO MGI:MGI:104867 (MGI:MGI:3607682|PMID:16234809) RGD PMID:16234809 MGI:MGI:3607682 NCBI chr10:18,128,869...18,131,745
Ensembl chr10:18,129,408...18,131,562
JBrowse link
NK T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tox thymocyte selection-associated high mobility group box ISO (MGI:MGI:3773459|PMID:18195075) RGD PMID:18195075 MGI:MGI:3773459 NCBI chr 5:19,892,698...20,189,721
Ensembl chr 5:19,892,698...20,189,721
JBrowse link
noradrenergic neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO (PMID:14532329) RGD PMID:14532329 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
Notch signaling pathway involved in arterial endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3847069|PMID:19144989)
Ensembl
UniProt
RGD
PMID:19144989 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3847069 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
oligodendrocyte cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO MGI:MGI:1857470 (MGI:MGI:3775335|PMID:17678855) RGD PMID:17678855 MGI:MGI:3775335 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
oligodendrocyte cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 ISO
IEA
MGI:MGI:1856155 (MGI:MGI:1313099|PMID:9828088)
GO_REF:0000107
RGD
Ensembl
PMID:9828088 GO_REF:0000107, MGI:MGI:1313099 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
G Sox6 SRY-box transcription factor 6 ISO MGI:MGI:2447148 (MGI:MGI:3693054|PMID:17084361) RGD PMID:17084361 MGI:MGI:3693054 NCBI chr 1:185,631,702...186,186,192
Ensembl chr 1:185,673,177...186,182,829
JBrowse link
osteoblast fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Men1 menin 1 ISO MGI:MGI:109452|MGI:MGI:1328787|MGI:MGI:99829 (MGI:MGI:3056877|PMID:15150273) RGD PMID:15150273 MGI:MGI:3056877 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Runx2 RUNX family transcription factor 2 ISO
IEA
MGI:MGI:1316736 (MGI:MGI:3056877|PMID:15150273)
GO_REF:0000107
RGD
Ensembl
PMID:15150273 GO_REF:0000107, MGI:MGI:3056877 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Sh3pxd2b SH3 and PX domains 2B ISO (MGI:MGI:5800302|PMID:27711054) RGD PMID:27711054 MGI:MGI:5800302 NCBI chr10:17,209,152...17,296,449
Ensembl chr10:17,209,212...17,291,876
JBrowse link
G Smad1 SMAD family member 1 ISO
IEA
MGI:MGI:1316736 (MGI:MGI:3056877|PMID:15150273)
GO_REF:0000107
RGD
Ensembl
PMID:15150273 GO_REF:0000107, MGI:MGI:3056877 NCBI chr19:32,182,942...32,248,694
Ensembl chr19:32,188,267...32,248,684
JBrowse link
G Smad5 SMAD family member 5 ISO MGI:MGI:1316736 (MGI:MGI:3056877|PMID:15150273) RGD PMID:15150273 MGI:MGI:3056877 NCBI chr17:8,307,448...8,336,996
Ensembl chr17:8,311,796...8,331,032
JBrowse link
pancreatic A cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurod1 neuronal differentiation 1 ISO MGI:MGI:97347 (MGI:MGI:3768695|PMID:17988662) RGD PMID:17988662 MGI:MGI:3768695 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
G Nkx2-2 NK2 homeobox 2 ISO MGI:MGI:1339708|MGI:MGI:1932100 (MGI:MGI:3703458|PMID:17202186), (MGI:MGI:3768695|PMID:17988662) RGD PMID:17202186, PMID:17988662 MGI:MGI:3703458, MGI:MGI:3768695 NCBI chr 3:141,408,460...141,419,083
Ensembl chr 3:141,408,798...141,411,170
JBrowse link
pancreatic PP cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurod1 neuronal differentiation 1 ISO MGI:MGI:97347 (MGI:MGI:3768695|PMID:17988662) RGD PMID:17988662 MGI:MGI:3768695 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
G Nkx2-2 NK2 homeobox 2 ISO MGI:MGI:1339708 (MGI:MGI:3768695|PMID:17988662) RGD PMID:17988662 MGI:MGI:3768695 NCBI chr 3:141,408,460...141,419,083
Ensembl chr 3:141,408,798...141,411,170
JBrowse link
paraxial mesodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxc2 forkhead box C2 ISO MGI:MGI:1857865 (MGI:MGI:86990|PMID:9106663) RGD PMID:9106663 MGI:MGI:86990 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Wnt3a Wnt family member 3A ISO MGI:MGI:1857489 (MGI:MGI:86727|PMID:9126297) RGD PMID:9126297 MGI:MGI:86727 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
positive regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO MGI:MGI:3583755 (MGI:MGI:5432296|PMID:22711842) RGD PMID:22711842 MGI:MGI:5432296 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
positive regulation of cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx6-2 NK6 homeobox 2 ISO MGI:MGI:2651850 (MGI:MGI:2150481|PMID:11567614) RGD PMID:11567614 MGI:MGI:2150481 NCBI chr 1:211,922,389...211,923,929
Ensembl chr 1:211,922,389...211,923,929
JBrowse link
G Spdef SAM pointed domain containing ets transcription factor ISO MGI:MGI:4398888 (MGI:MGI:4397649|PMID:19759516) RGD PMID:19759516 MGI:MGI:4397649 NCBI chr20:7,292,823...7,308,053
Ensembl chr20:7,292,824...7,307,284
JBrowse link
positive regulation of cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf2 fibroblast growth factor 2 ISO (PMID:18635606) RGD PMID:18635606 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor ISO MGI:MGI:2449921 (MGI:MGI:3606816|PMID:16230531) RGD PMID:16230531 MGI:MGI:3606816 NCBI chr14:3,058,035...3,073,332
Ensembl chr14:3,058,993...3,068,371
JBrowse link
G Pax6 paired box 6 IMP RGD PMID:11880342 RGD:729590 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
positive regulation of heart induction by negative regulation of canonical Wnt signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 ISO (MGI:MGI:3835736|PMID:18297060) RGD PMID:18297060 MGI:MGI:3835736 NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 ISO (MGI:MGI:3835736|PMID:18297060) RGD PMID:18297060 MGI:MGI:3835736 NCBI chr 1:141,532,390...141,533,908
Ensembl chr 1:141,532,390...141,533,908
JBrowse link
G Wnt11 Wnt family member 11 ISO UniProtKB:P22725 (MGI:MGI:5424267|PMID:22569553) RGD PMID:22569553 MGI:MGI:5424267 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Wnt5a Wnt family member 5A IEA
ISO
GO_REF:0000107
UniProtKB:P48615 (MGI:MGI:5424267|PMID:22569553)
Ensembl
RGD
PMID:22569553 GO_REF:0000107, MGI:MGI:5424267 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
positive regulation of mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3a Wnt family member 3A ISO (PMID:20559569) RGD PMID:20559569 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
positive regulation of T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il23a interleukin 23 subunit alpha ISO
IBA
(MGI:MGI:3851279|PMID:19501566)
PMID:21873635
RGD PMID:19501566, PMID:21873635 MGI:MGI:3851279, RGD:13792537 NCBI chr 7:2,710,609...2,712,723
Ensembl chr 7:2,710,609...2,712,723
JBrowse link
regulation of cardiac cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox17 SRY-box transcription factor 17 ISO (MGI:MGI:3703823|PMID:17360443) RGD PMID:17360443 MGI:MGI:3703823 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
regulation of cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:18823971)
Ensembl
UniProt
RGD
PMID:18823971 GO_REF:0000024, GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Gdf3 growth differentiation factor 3 ISO (PMID:18823971) RGD PMID:18823971 NCBI chr 4:155,417,667...155,422,014
Ensembl chr 4:155,417,004...155,421,998
JBrowse link
G Pax7 paired box 7 ISO MGI:MGI:1857831|MGI:MGI:3047633 (MGI:MGI:5440096|PMID:23070814) RGD PMID:23070814 MGI:MGI:5440096 NCBI chr 5:158,211,001...158,313,510
Ensembl chr 5:158,214,616...158,313,426
JBrowse link
G Zfp157 zinc finger protein 157 ISO MGI:MGI:4124834 (MGI:MGI:5424261|PMID:22588720) RGD PMID:22588720 MGI:MGI:5424261 NCBI chr12:18,461,283...18,495,871
Ensembl chr12:18,464,781...18,487,178
JBrowse link
regulation of cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lmo4 LIM domain only 4 ISO MGI:MGI:3664560 (MGI:MGI:3840011|PMID:19323994) RGD PMID:19323994 MGI:MGI:3840011 NCBI chr 2:250,218,635...250,235,435
Ensembl chr 2:250,218,641...250,241,673
JBrowse link
regulation of endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 ISO (PMID:20559569) RGD PMID:20559569 NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607
JBrowse link
regulation of heart induction by regulation of canonical Wnt signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou5f1 POU class 5 homeobox 1 ISO (PMID:19736317) RGD PMID:19736317 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
regulation of inner ear auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esrp1 epithelial splicing regulatory protein 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:5915403|PMID:29107558)
UniProt
RGD
PMID:29107558 GO_REF:0000024, MGI:MGI:5915403 NCBI chr 5:24,576,988...24,631,758
Ensembl chr 5:24,576,991...24,631,698
JBrowse link
regulation of lateral mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A ISO MGI:MGI:95522 (MGI:MGI:3702797|PMID:16943278) RGD PMID:16943278 MGI:MGI:3702797 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 ISO
IEA
MGI:MGI:1338938 (MGI:MGI:3702797|PMID:16943278)
GO_REF:0000107
RGD
Ensembl
PMID:16943278 GO_REF:0000107, MGI:MGI:3702797 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
regulation of neural crest cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A NOT ISO (MGI:MGI:3040576|PMID:15073157) RGD PMID:15073157 MGI:MGI:3040576 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
JBrowse link
regulation of transcription from RNA polymerase II promoter involved in definitive endodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox17 SRY-box transcription factor 17 ISO (MGI:MGI:4946573|PMID:21305474) RGD PMID:21305474 MGI:MGI:4946573 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx1 distal-less homeobox 1 ISO
IEA
MGI:MGI:94902 (MGI:MGI:3775335|PMID:17678855)
GO_REF:0000107
RGD
Ensembl
PMID:17678855 GO_REF:0000107, MGI:MGI:3775335 NCBI chr 3:58,164,931...58,169,521
Ensembl chr 3:58,164,931...58,169,521
JBrowse link
G Dlx2 distal-less homeobox 2 ISO
IEA
MGI:MGI:94901 (MGI:MGI:3775335|PMID:17678855)
GO_REF:0000107
RGD
Ensembl
PMID:17678855 GO_REF:0000107, MGI:MGI:3775335 NCBI chr 3:58,180,088...58,181,971
Ensembl chr 3:58,180,088...58,181,971
JBrowse link
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 ISO MGI:MGI:5504429 (MGI:MGI:5490928|PMID:23643363) RGD PMID:23643363 MGI:MGI:5490928 NCBI chr 7:2,875,898...2,905,463
Ensembl chr 7:2,875,909...2,904,453
JBrowse link
regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 ISO
IEA
MGI:MGI:1856155 (MGI:MGI:894150|PMID:9230312)
GO_REF:0000107
RGD
Ensembl
PMID:9230312 GO_REF:0000107, MGI:MGI:894150 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lbx1 ladybird homeobox 1 ISO MGI:MGI:2182635 (MGI:MGI:2179903|PMID:12062038) RGD PMID:12062038 MGI:MGI:2179903 NCBI chr 1:264,973,315...264,975,132
Ensembl chr 1:264,973,315...264,975,132
JBrowse link
regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx6-1 NK6 homeobox 1 ISO MGI:MGI:1352738 (MGI:MGI:2150481|PMID:11567614) RGD PMID:11567614 MGI:MGI:2150481 NCBI chr14:9,555,264...9,562,197
Ensembl chr14:9,555,264...9,562,189
JBrowse link
G Nkx6-2 NK6 homeobox 2 ISO MGI:MGI:1206039 (MGI:MGI:2150481|PMID:11567614) RGD PMID:11567614 MGI:MGI:2150481 NCBI chr 1:211,922,389...211,923,929
Ensembl chr 1:211,922,389...211,923,929
JBrowse link
G Pax6 paired box 6 ISO
IEA
MGI:MGI:1856155 (MGI:MGI:894150|PMID:9230312)
GO_REF:0000107
RGD
Ensembl
PMID:9230312 GO_REF:0000107, MGI:MGI:894150 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Evx1 even-skipped homeobox 1 ISO MGI:MGI:2182858 (MGI:MGI:2136555|PMID:11239430) RGD PMID:11239430 MGI:MGI:2136555 NCBI chr 4:82,370,829...82,374,313
Ensembl chr 4:82,370,997...82,375,374
JBrowse link
G Nkx6-1 NK6 homeobox 1 ISO MGI:MGI:2386119 (MGI:MGI:2150481|PMID:11567614) RGD PMID:11567614 MGI:MGI:2150481 NCBI chr14:9,555,264...9,562,197
Ensembl chr14:9,555,264...9,562,189
JBrowse link
G Nkx6-2 NK6 homeobox 2 ISO MGI:MGI:2651850 (MGI:MGI:2150481|PMID:11567614) RGD PMID:11567614 MGI:MGI:2150481 NCBI chr 1:211,922,389...211,923,929
Ensembl chr 1:211,922,389...211,923,929
JBrowse link
G Pax6 paired box 6 ISO
IEA
MGI:MGI:1856155 (MGI:MGI:894150|PMID:9230312)
GO_REF:0000107
RGD
Ensembl
PMID:9230312 GO_REF:0000107, MGI:MGI:894150 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
regulation of transcription involved in cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd5 chromodomain helicase DNA binding protein 5 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:169,519,212...169,572,059
Ensembl chr 5:169,519,212...169,567,107
JBrowse link
regulation of transcription involved in lymphatic endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 ISO (PMID:18815287) RGD PMID:18815287 NCBI chr 1:131,447,671...131,465,749
Ensembl chr 1:131,448,447...131,460,473
JBrowse link
G Prox1 prospero homeobox 1 ISO (PMID:18815287) RGD PMID:18815287 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
retinal rod cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casz1 castor zinc finger 1 ISO MGI:MGI:3052661|MGI:MGI:4841554 (MGI:MGI:5629913|PMID:25654255) RGD PMID:25654255 MGI:MGI:5629913 NCBI chr 5:165,625,119...165,777,053
Ensembl chr 5:165,724,027...165,774,616
JBrowse link
Sertoli cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rara retinoic acid receptor, alpha ISO (MGI:MGI:5284770|PMID:17905941) RGD PMID:17905941 MGI:MGI:5284770 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
site-specific DNA replication termination at RTS1 barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtfdc1 replication termination factor 2 domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:170,443,895...170,473,456
Ensembl chr 3:170,443,855...170,473,456
JBrowse link
skeletal muscle satellite cell commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax7 paired box 7 ISO MGI:MGI:1857831 (MGI:MGI:1889987|PMID:11030621) RGD PMID:11030621 MGI:MGI:1889987 NCBI chr 5:158,211,001...158,313,510
Ensembl chr 5:158,214,616...158,313,426
JBrowse link
smoothened signaling pathway involved in spinal cord motor neuron cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli2 GLI family zinc finger 2 ISO MGI:MGI:95729 (MGI:MGI:3051712|PMID:15215207) RGD PMID:15215207 MGI:MGI:3051712 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:95728 (MGI:MGI:3051712|PMID:15215207) RGD PMID:15215207 MGI:MGI:3051712 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling ISO MGI:MGI:4840420 (MGI:MGI:4355593|PMID:19684112) RGD PMID:19684112 MGI:MGI:4355593 NCBI chr 1:266,143,766...266,241,742
Ensembl chr 1:266,143,818...266,239,016
JBrowse link
smoothened signaling pathway involved in ventral spinal cord interneuron specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli2 GLI family zinc finger 2 ISO MGI:MGI:95729 (MGI:MGI:3051712|PMID:15215207) RGD PMID:15215207 MGI:MGI:3051712 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:95728 (MGI:MGI:3051712|PMID:15215207) RGD PMID:15215207 MGI:MGI:3051712 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling ISO MGI:MGI:4840420 (MGI:MGI:4355593|PMID:19684112) RGD PMID:19684112 MGI:MGI:4355593 NCBI chr 1:266,143,766...266,241,742
Ensembl chr 1:266,143,818...266,239,016
JBrowse link
spinal cord motor neuron cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxc10 homeo box C10 ISO MGI:MGI:96202 (MGI:MGI:3771768|PMID:18065432) RGD PMID:18065432 MGI:MGI:3771768 NCBI chr 7:144,577,578...144,582,802
Ensembl chr 7:144,577,465...144,582,622
JBrowse link
G Hoxd10 homeo box D10 ISO MGI:MGI:96192 (MGI:MGI:3771768|PMID:18065432) RGD PMID:18065432 MGI:MGI:3771768 NCBI chr 3:61,614,133...61,617,342
Ensembl chr 3:61,613,774...61,617,367
JBrowse link
G Isl1 ISL LIM homeobox 1 ISO MGI:MGI:102673 (MGI:MGI:4356383|PMID:19666821) RGD PMID:19666821 MGI:MGI:4356383 NCBI chr 2:48,488,911...48,501,217
Ensembl chr 2:48,487,736...48,501,436
JBrowse link
G Isl2 ISL LIM homeobox 2 ISO
IEA
MGI:MGI:102673 (MGI:MGI:4356383|PMID:19666821)
GO_REF:0000107
RGD
Ensembl
PMID:19666821 GO_REF:0000107, MGI:MGI:4356383 NCBI chr 8:60,117,565...60,122,716
Ensembl chr 8:60,117,729...60,122,211
JBrowse link
G Lhx3 LIM homeobox 3 ISO MGI:MGI:101791|MGI:MGI:109156 (MGI:MGI:4356383|PMID:19666821) RGD PMID:19666821 MGI:MGI:4356383 NCBI chr 3:3,653,861...3,662,509
Ensembl chr 3:3,654,755...3,661,810
JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 ISO
IBA
MGI:MGI:2182358|MGI:MGI:2182361|MGI:MGI:2182363 (MGI:MGI:1344237|PMID:10482234)
PMID:21873635
RGD PMID:10482234, PMID:21873635 MGI:MGI:1344237, RGD:13792537 NCBI chr 4:2,376,350...2,381,308
Ensembl chr 4:2,376,958...2,381,271
JBrowse link
G Olig3 oligodendrocyte transcription factor 3 ISO MGI:MGI:3573868 (MGI:MGI:3531376|PMID:15769945) RGD PMID:15769945 MGI:MGI:3531376 NCBI chr 1:14,797,766...14,799,835
Ensembl chr 1:14,797,766...14,799,835
JBrowse link
spinal cord oligodendrocyte cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO MGI:MGI:1857470 (MGI:MGI:3794240|PMID:18287202) RGD PMID:18287202 MGI:MGI:3794240 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
G Nkx2-2 NK2 homeobox 2 ISO (MGI:MGI:3794240|PMID:18287202) RGD PMID:18287202 MGI:MGI:3794240 NCBI chr 3:141,408,460...141,419,083
Ensembl chr 3:141,408,798...141,411,170
JBrowse link
G Olig2 oligodendrocyte transcription factor 2 ISO (MGI:MGI:3794240|PMID:18287202) RGD PMID:18287202 MGI:MGI:3794240 NCBI chr11:31,389,514...31,392,890
Ensembl chr11:31,389,514...31,392,890
JBrowse link
stem cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox17 SRY-box transcription factor 17 ISO (MGI:MGI:4453910|PMID:20228271) RGD PMID:20228271 MGI:MGI:4453910 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
G Sox18 SRY-box transcription factor 18 ISO (MGI:MGI:4453910|PMID:20228271) RGD PMID:20228271 MGI:MGI:4453910 NCBI chr 3:177,177,237...177,179,039
Ensembl chr 3:177,177,310...177,179,127
JBrowse link
subpallium neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO MGI:MGI:1857470 (MGI:MGI:1321050|PMID:9876181) RGD PMID:9876181 MGI:MGI:1321050 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
G Gsx2 GS homeobox 2 ISO MGI:MGI:2150162 (MGI:MGI:1928687|PMID:11124115) RGD PMID:11124115 MGI:MGI:1928687 NCBI chr14:35,650,985...35,652,709
Ensembl chr14:35,650,985...35,652,709
JBrowse link
T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator ISO MGI:MGI:2156165 (MGI:MGI:78866|PMID:8788039) RGD PMID:8788039 MGI:MGI:78866 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Foxn1 forkhead box N1 ISO (MGI:MGI:5554515|PMID:24184560) RGD PMID:24184560 MGI:MGI:5554515 NCBI chr10:65,621,142...65,634,666
Ensembl chr10:65,621,257...65,634,666
JBrowse link
G Il7 interleukin 7 ISO
IEA
MGI:MGI:1857652 (MGI:MGI:894974|PMID:9252127)
GO_REF:0000107
RGD
Ensembl
PMID:9252127 GO_REF:0000107, MGI:MGI:894974 NCBI chr 2:96,427,884...96,474,979
Ensembl chr 2:96,439,286...96,474,977
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO MGI:MGI:1857113 (MGI:MGI:78866|PMID:8788039) RGD PMID:8788039 MGI:MGI:78866 NCBI chr11:89,293,547...89,510,948
Ensembl chr11:89,293,696...89,510,871
JBrowse link
G Rag2 recombination activating 2 ISO MGI:MGI:1858556 (MGI:MGI:78866|PMID:8788039) RGD PMID:8788039 MGI:MGI:78866 NCBI chr 3:91,191,837...91,200,134
Ensembl chr 3:91,191,837...91,200,134
JBrowse link
G Tp53 tumor protein p53 ISO MGI:MGI:1857590 (MGI:MGI:78866|PMID:8788039) RGD PMID:8788039 MGI:MGI:78866 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
T-helper 1 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4 interleukin 4 ISO MGI:MGI:103034 (MGI:MGI:4838368|PMID:20706986) RGD PMID:20706986 MGI:MGI:4838368 NCBI chr10:38,963,979...38,969,531
Ensembl chr10:38,963,979...38,969,531
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (MGI:MGI:5788050|PMID:26410627) RGD PMID:26410627 MGI:MGI:5788050 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Spn sialophorin ISS
ISO
GO_REF:0000024
(PMID:18036228)
UniProt
RGD
PMID:18036228 GO_REF:0000024 NCBI chr 1:198,572,999...198,585,664
Ensembl chr 1:198,572,999...198,577,226
JBrowse link
G Stat6 signal transducer and activator of transcription 6 ISO MGI:MGI:96556 (MGI:MGI:4838368|PMID:20706986) RGD PMID:20706986 MGI:MGI:4838368 NCBI chr 7:70,946,228...70,963,542
Ensembl chr 7:70,946,228...70,964,484
JBrowse link
T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Batf basic leucine zipper ATF-like transcription factor ISS
ISO
GO_REF:0000024
(MGI:MGI:3851267|PMID:19578362), (MGI:MGI:5448096|PMID:22983707)
UniProt
RGD
PMID:19578362, PMID:22983707 GO_REF:0000024, MGI:MGI:3851267, MGI:MGI:5448096 NCBI chr 6:109,562,415...109,584,541
Ensembl chr 6:109,562,587...109,584,545
JBrowse link
G Il6 interleukin 6 ISS
ISO
GO_REF:0000024
(MGI:MGI:3692468|PMID:16990136), (MGI:MGI:6142555|PMID:27893700)
UniProt
RGD
PMID:16990136, PMID:27893700 GO_REF:0000024, MGI:MGI:3692468, MGI:MGI:6142555 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Il6r interleukin 6 receptor ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:MGI:6142555|PMID:27893700)
UniProt
Ensembl
RGD
PMID:27893700 GO_REF:0000024, GO_REF:0000107, MGI:MGI:6142555 NCBI chr 2:189,196,180...189,255,987
Ensembl chr 2:189,205,701...189,254,628
JBrowse link
G Irf4 interferon regulatory factor 4 ISO (MGI:MGI:5448096|PMID:22983707) RGD PMID:22983707 MGI:MGI:5448096 NCBI chr17:34,886,746...34,905,191
Ensembl chr17:34,886,739...34,905,117
JBrowse link
G Ly9 lymphocyte antigen 9 ISO (PMID:22184727) RGD PMID:22184727 NCBI chr13:90,002,779...90,022,346
Ensembl chr13:90,002,783...90,022,269
JBrowse link
G Otud5 OTU deubiquitinase 5 ISO MGI:MGI:2386448|MGI:MGI:5752247 (MGI:MGI:5621075|PMID:25470037) RGD PMID:25470037 MGI:MGI:5621075 NCBI chr  X:15,471,212...15,504,372
Ensembl chr  X:15,471,211...15,504,165
JBrowse link
G Slamf6 SLAM family member 6 ISO (PMID:22184727) RGD PMID:22184727 NCBI chr13:90,300,160...90,321,781
Ensembl chr13:90,301,006...90,322,457
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO
ISS
(MGI:MGI:5825383|PMID:28065600)
GO_REF:0000024
RGD
UniProt
PMID:28065600 GO_REF:0000024, MGI:MGI:5825383 NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233
JBrowse link
trophectodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prickle2 prickle planar cell polarity protein 2 ISO MGI:MGI:4941925 (MGI:MGI:5319591|PMID:22333836) RGD PMID:22333836 MGI:MGI:5319591 NCBI chr 4:124,238,167...124,584,176
Ensembl chr 4:124,238,167...124,338,176
JBrowse link
G Tead4 TEA domain transcription factor 4 ISO MGI:MGI:106907 (MGI:MGI:3770613|PMID:18083014) RGD PMID:18083014 MGI:MGI:3770613 NCBI chr 4:161,542,566...161,619,848
Ensembl chr 4:161,540,130...161,587,222
JBrowse link
type B pancreatic cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-2 NK2 homeobox 2 ISO MGI:MGI:1932100 (MGI:MGI:3703458|PMID:17202186), (MGI:MGI:3768695|PMID:17988662) RGD PMID:17202186, PMID:17988662 MGI:MGI:3703458, MGI:MGI:3768695 NCBI chr 3:141,408,460...141,419,083
Ensembl chr 3:141,408,798...141,411,170
JBrowse link
ventral spinal cord interneuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 ISO
ISS
(MGI:MGI:3587461|PMID:16020526)
GO_REF:0000024
RGD
UniProt
PMID:16020526 GO_REF:0000024, MGI:MGI:3587461 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
G Dll4 delta like canonical Notch ligand 4 ISO UniProtKB:Q8K3Q3 (PMID:17728344) RGD PMID:17728344 NCBI chr 3:111,135,011...111,146,746
Ensembl chr 3:111,135,021...111,145,986
JBrowse link
G Foxn4 forkhead box N4 ISO (MGI:MGI:3587461|PMID:16020526), (MGI:MGI:3765356|PMID:17728344) RGD PMID:16020526, PMID:17728344 MGI:MGI:3587461, MGI:MGI:3765356 NCBI chr12:48,101,012...48,121,281
Ensembl chr12:48,101,673...48,121,270
JBrowse link
ventral spinal cord interneuron fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-2 NK2 homeobox 2 ISO MGI:MGI:1932100 (MGI:MGI:1334824|PMID:10217145) RGD PMID:10217145 MGI:MGI:1334824 NCBI chr 3:141,408,460...141,419,083
Ensembl chr 3:141,408,798...141,411,170
JBrowse link
ventral spinal cord interneuron specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbx1 developing brain homeobox 1 ISO MGI:MGI:2182329 (MGI:MGI:2136554|PMID:11239429) RGD PMID:11239429 MGI:MGI:2136554 NCBI chr 1:104,969,218...104,973,648
Ensembl chr 1:104,969,218...104,973,648
JBrowse link
G Dmrt3 doublesex and mab-3 related transcription factor 3 ISO MGI:MGI:4420993 (MGI:MGI:5435948|PMID:22932389) RGD PMID:22932389 MGI:MGI:5435948 NCBI chr 1:243,589,607...243,602,926
Ensembl chr 1:243,589,607...243,602,926
JBrowse link
G Lhx3 LIM homeobox 3 ISO (MGI:MGI:4356383|PMID:19666821) RGD PMID:19666821 MGI:MGI:4356383 NCBI chr 3:3,653,861...3,662,509
Ensembl chr 3:3,654,755...3,661,810
JBrowse link
G Shh sonic hedgehog signaling molecule IDA PMID:9230312 MGI PMID:9230312 RGD:8553789 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Sox1 SRY-box transcription factor 1 ISO MGI:MGI:3653406 (MGI:MGI:4834949|PMID:20844123) RGD PMID:20844123 MGI:MGI:4834949

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    cellular process 18798
      cellular developmental process 4459
        cell fate commitment 287
          B cell lineage commitment + 6
          DCT cell fate commitment + 0
          T cell lineage commitment + 29
          apical cell fate commitment 0
          asymmetric neuroblast division + 6
          cardiac cell fate commitment + 14
          cell fate commitment involved in formation of primary germ layer + 31
          cell fate commitment involved in pattern specification + 16
          cell fate determination + 44
          cell fate specification + 104
          cell-cell signaling involved in cell fate commitment + 3
          compound eye cone cell fate commitment + 0
          determination of imaginal disc primordium + 0
          eosinophil fate commitment + 2
          epithelial cell fate commitment + 17
          glial cell fate commitment + 15
          guard cell fate commitment 0
          hypothalamus gonadotrophin-releasing hormone neuron fate commitment 0
          inner cell mass cell fate commitment 3
          juxtaglomerulus cell fate commitment + 0
          lens fiber cell fate commitment 0
          mating type determination + 3
          mesangial cell fate commitment + 0
          mesenchymal cell fate commitment 0
          muscle cell fate commitment + 14
          myoblast fate commitment + 4
          negative regulation of cell fate commitment + 16
          neuron fate commitment + 78
          oocyte fate commitment 0
          osteoblast fate commitment 5
          pancreatic E cell fate commitment 0
          positive regulation of cell fate commitment + 7
          pro-T cell lineage commitment 0
          proximal convoluted tubule segment 1 cell fate commitment 0
          regulation of cell fate commitment + 35
          regulation of transcription involved in cell fate commitment + 12
          renal interstitial fibroblast fate commitment + 0
          seed trichome initiation 0
          skeletal muscle satellite cell commitment + 1
          stem cell fate commitment + 7
          trophectodermal cell fate commitment 2
          vulval cell fate commitment + 0
Path 2
Term Annotations click to browse term
  biological_process 20027
    cellular process 18798
      cellular developmental process 4459
        cell differentiation 4363
          cell fate commitment 287
            B cell lineage commitment + 6
            DCT cell fate commitment + 0
            T cell lineage commitment + 29
            apical cell fate commitment 0
            asymmetric neuroblast division + 6
            cardiac cell fate commitment + 14
            cell fate commitment involved in formation of primary germ layer + 31
            cell fate commitment involved in pattern specification + 16
            cell fate determination + 44
            cell fate specification + 104
            cell-cell signaling involved in cell fate commitment + 3
            compound eye cone cell fate commitment + 0
            determination of imaginal disc primordium + 0
            eosinophil fate commitment + 2
            epithelial cell fate commitment + 17
            glial cell fate commitment + 15
            guard cell fate commitment 0
            hypothalamus gonadotrophin-releasing hormone neuron fate commitment 0
            inner cell mass cell fate commitment 3
            juxtaglomerulus cell fate commitment + 0
            lens fiber cell fate commitment 0
            mating type determination + 3
            mesangial cell fate commitment + 0
            mesenchymal cell fate commitment 0
            muscle cell fate commitment + 14
            myoblast fate commitment + 4
            negative regulation of cell fate commitment + 16
            neuron fate commitment + 78
            oocyte fate commitment 0
            osteoblast fate commitment 5
            pancreatic E cell fate commitment 0
            positive regulation of cell fate commitment + 7
            pro-T cell lineage commitment 0
            proximal convoluted tubule segment 1 cell fate commitment 0
            regulation of cell fate commitment + 35
            regulation of transcription involved in cell fate commitment + 12
            renal interstitial fibroblast fate commitment + 0
            seed trichome initiation 0
            skeletal muscle satellite cell commitment + 1
            stem cell fate commitment + 7
            trophectodermal cell fate commitment 2
            vulval cell fate commitment + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.