ONTOLOGY REPORT - ANNOTATIONS |
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Term: | T cell lineage commitment |
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Accession: | GO:0002360
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browse the term
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Definition: | The process in which a lymphoid progenitor cell becomes committed to becoming any type of T cell. |
Synonyms: | exact_synonym: | T-lymphocyte lineage commitment |
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Bcl2
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BCL2, apoptosis regulator
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acts_upstream_of_or_within
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ISO
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MGI:2156165 (PMID:8788039)
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RGD |
PMID:8788039 |
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NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
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Foxn1
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forkhead box N1
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involved_in
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ISO IEA
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(PMID:24184560) GO_REF:0000107
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RGD Ensembl |
PMID:24184560 |
GO_REF:0000107 |
NCBI chr10:63,749,461...63,778,468
Ensembl chr10:63,251,400...63,273,710
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Il7
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interleukin 7
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acts_upstream_of_or_within
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ISO
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MGI:1857652 (PMID:9252127)
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RGD |
PMID:9252127 |
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NCBI chr 2:96,142,523...96,186,282
Ensembl chr 2:94,234,766...94,280,075
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Prkdc
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protein kinase, DNA-activated, catalytic subunit
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acts_upstream_of_or_within
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ISO IEA
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MGI:1857113 (PMID:8788039) GO_REF:0000107
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RGD Ensembl |
PMID:8788039 |
GO_REF:0000107 |
NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952
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Rag2
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recombination activating 2
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acts_upstream_of_or_within
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ISO IEA
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MGI:1858556 (PMID:8788039) GO_REF:0000107
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RGD Ensembl |
PMID:8788039 |
GO_REF:0000107 |
NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066
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Tp53
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tumor protein p53
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acts_upstream_of_or_within
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ISO IEA
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MGI:1857590 (PMID:8788039) GO_REF:0000107
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RGD Ensembl |
PMID:8788039 |
GO_REF:0000107 |
NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
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Rhoa
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ras homolog family member A
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involved_in
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ISO
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(PMID:25398325)
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RGD |
PMID:25398325 |
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NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746
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Braf
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B-Raf proto-oncogene, serine/threonine kinase
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acts_upstream_of_or_within
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ISO
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MGI:1857579 (PMID:18228248)
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RGD |
PMID:18228248 |
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NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:68,384,649...68,510,463
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Cyld
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CYLD lysine 63 deubiquitinase
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acts_upstream_of_or_within
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ISO IEA
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MGI:3664438 (PMID:16501569) GO_REF:0000107
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RGD Ensembl |
PMID:16501569 |
GO_REF:0000107 |
NCBI chr19:34,487,491...34,547,311
Ensembl chr19:18,314,019...18,373,658
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Shh
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sonic hedgehog signaling molecule
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involved_in
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ISS ISO IEA
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GO_REF:0000024 (PMID:17227833) GO_REF:0000107
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UniProt RGD Ensembl |
PMID:17227833 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170
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Ctsl
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cathepsin L
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involved_in
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ISS ISO
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GO_REF:0000024 (PMID:9545226)
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UniProt RGD |
PMID:9545226 |
GO_REF:0000024 |
NCBI chr17:770,104...776,266
Ensembl chr17:764,309...770,548
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Tox
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thymocyte selection-associated high mobility group box
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involved_in
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ISO IEA
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(PMID:18195075) GO_REF:0000107
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RGD Ensembl |
PMID:18195075 |
GO_REF:0000107 |
NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272
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Tox
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thymocyte selection-associated high mobility group box
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involved_in
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ISO IEA
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(PMID:18195075) GO_REF:0000107
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RGD Ensembl |
PMID:18195075 |
GO_REF:0000107 |
NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272
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Bcl2
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BCL2, apoptosis regulator
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acts_upstream_of_or_within
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ISO
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MGI:2156165 (PMID:8170972)
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RGD |
PMID:8170972 |
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NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
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Tox
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thymocyte selection-associated high mobility group box
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involved_in
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ISO IEA
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(PMID:11850626), (PMID:15078895) GO_REF:0000107
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RGD Ensembl |
PMID:11850626 PMID:15078895 |
GO_REF:0000107 |
NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272
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Cd69
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Cd69 molecule
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involved_in
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ISO
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(PMID:24752896)
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RGD |
PMID:24752896 |
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NCBI chr 4:164,411,485...164,419,403
Ensembl chr 4:162,725,446...162,733,542
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Jak3
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Janus kinase 3
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involved_in
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ISO
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(PMID:20696842)
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RGD |
PMID:20696842 |
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NCBI chr16:18,418,807...18,432,515
Ensembl chr16:18,386,405...18,398,536
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Lgals1
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galectin 1
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involved_in
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ISO IEA
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(PMID:24752896) GO_REF:0000107
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RGD Ensembl |
PMID:24752896 |
GO_REF:0000107 |
NCBI chr 7:112,365,695...112,368,801
Ensembl chr 7:110,481,392...110,488,345
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Loxl3
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lysyl oxidase-like 3
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involved_in
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ISO
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(PMID:28065600)
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RGD |
PMID:28065600 |
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NCBI chr 4:117,098,358...117,114,673
Ensembl chr 4:115,540,685...115,557,466
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Stat5a
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signal transducer and activator of transcription 5A
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involved_in
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ISO IEA
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(PMID:20696842) GO_REF:0000107
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RGD Ensembl |
PMID:20696842 |
GO_REF:0000107 |
NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866
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Tbx21
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T-box transcription factor 21
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involved_in
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ISO IEA
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(PMID:21151104) GO_REF:0000107
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RGD Ensembl |
PMID:21151104 |
GO_REF:0000107 |
NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831
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Tnfsf18
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TNF superfamily member 18
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involved_in
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ISO
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(PMID:24107315)
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RGD |
PMID:24107315 |
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NCBI chr13:76,366,790...76,440,673
Ensembl chr13:73,831,252...73,843,169
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Kctd9
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potassium channel tetramerization domain containing 9
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acts_upstream_of_or_within
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ISO
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(PMID:31024568)
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RGD |
PMID:31024568 |
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NCBI chr15:46,117,211...46,145,258
Ensembl chr15:41,942,381...41,969,862
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Tox
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thymocyte selection-associated high mobility group box
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involved_in
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ISO IEA
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(PMID:18195075) GO_REF:0000107
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RGD Ensembl |
PMID:18195075 |
GO_REF:0000107 |
NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272
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Brd2
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bromodomain containing 2
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involved_in
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ISS ISO IEA
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GO_REF:0000024 (PMID:28262505) GO_REF:0000107
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UniProt RGD Ensembl |
PMID:28262505 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr20:4,728,282...4,737,286
Ensembl chr20:4,728,151...4,735,388
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Brd4
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bromodomain containing 4
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involved_in
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ISO
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(PMID:28262505)
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RGD |
PMID:28262505 |
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NCBI chr 7:11,866,997...11,946,575
Ensembl chr 7:11,216,446...11,295,539
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G
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Ep300
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E1A binding protein p300
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involved_in
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ISO
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(PMID:28262505)
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RGD |
PMID:28262505 |
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NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
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Il23a
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interleukin 23 subunit alpha
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involved_in
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IBA ISO IEA
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GO_REF:0000033 (PMID:19501566) GO_REF:0000107
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GO_Central RGD Ensembl |
PMID:19501566 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 7:1,306,320...1,308,434
Ensembl chr 7:721,809...723,923
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Opa1
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OPA1, mitochondrial dynamin like GTPase
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involved_in
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ISS ISO IEA
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GO_REF:0000024 (PMID:36171294) GO_REF:0000107
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UniProt RGD Ensembl |
PMID:36171294 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr11:84,612,943...84,690,025
Ensembl chr11:71,109,873...71,185,109
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Il4
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interleukin 4
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acts_upstream_of_or_within
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ISO
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MGI:103034 (PMID:20706986)
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RGD |
PMID:20706986 |
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NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
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Mtor
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mechanistic target of rapamycin kinase
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involved_in
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IEA ISO
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GO_REF:0000107 (PMID:26410627)
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Ensembl RGD |
PMID:26410627 |
GO_REF:0000107 |
NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311
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Spn
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sialophorin
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involved_in
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ISO ISS
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(PMID:18036228) GO_REF:0000024
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RGD UniProt |
PMID:18036228 |
GO_REF:0000024 |
NCBI chr 1:191,177,449...191,190,115
Ensembl chr 1:181,746,429...181,759,628
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Stat6
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signal transducer and activator of transcription 6
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acts_upstream_of_or_within
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ISO
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MGI:96556 (PMID:20706986)
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RGD |
PMID:20706986 |
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NCBI chr 7:65,365,505...65,382,825
Ensembl chr 7:63,479,642...63,498,495
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Tbx21
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T-box transcription factor 21
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involved_in
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ISO IEA
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(PMID:10761931) GO_REF:0000107
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RGD Ensembl |
PMID:10761931 |
GO_REF:0000107 |
NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831
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Batf
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basic leucine zipper ATF-like transcription factor
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involved_in
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ISS IEA ISO
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GO_REF:0000024 GO_REF:0000107 (PMID:19578362), (PMID:22983707)
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UniProt Ensembl RGD |
PMID:19578362 PMID:22983707 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 6:111,084,717...111,107,052
Ensembl chr 6:105,353,715...105,376,051
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Il6
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interleukin 6
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involved_in
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ISS ISO
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GO_REF:0000024 (PMID:16990136), (PMID:27893700)
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UniProt RGD |
PMID:16990136 PMID:27893700 |
GO_REF:0000024 |
NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178
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Il6r
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interleukin 6 receptor
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involved_in
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ISS ISO
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GO_REF:0000024 (PMID:27893700)
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UniProt RGD |
PMID:27893700 |
GO_REF:0000024 |
NCBI chr 2:177,582,020...177,646,705
Ensembl chr 2:175,298,686...175,347,536
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Irf4
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interferon regulatory factor 4
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involved_in
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ISO IEA
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(PMID:22983707) GO_REF:0000107
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RGD Ensembl |
PMID:22983707 |
GO_REF:0000107 |
NCBI chr17:33,930,460...33,948,842
Ensembl chr17:33,721,811...33,740,070
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Ly9
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lymphocyte antigen 9
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involved_in
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ISO IEA
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(PMID:22184727) GO_REF:0000107
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RGD Ensembl |
PMID:22184727 |
GO_REF:0000107 |
NCBI chr13:86,610,762...86,633,314
Ensembl chr13:84,079,458...84,100,823
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Otud5
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OTU deubiquitinase 5
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acts_upstream_of_or_within
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ISO
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MGI:2386448|MGI:5752247 (PMID:25470037)
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RGD |
PMID:25470037 |
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NCBI chr X:17,296,750...17,331,257
Ensembl chr X:14,626,164...14,659,573
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G
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Slamf6
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SLAM family member 6
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involved_in
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ISO
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(PMID:22184727)
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RGD |
PMID:22184727 |
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NCBI chr13:86,916,956...86,937,697
Ensembl chr13:84,383,742...84,405,300
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G
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Stat3
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signal transducer and activator of transcription 3
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involved_in
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ISS ISO IEA
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GO_REF:0000024 (PMID:28065600) GO_REF:0000107
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UniProt RGD Ensembl |
PMID:28065600 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:86,311,528...86,363,513
Ensembl chr10:85,811,218...85,863,057
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Term paths to the root
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