cystadenocarcinoma - Ontology Report - Rat Genome Database

Submit Data | Help | Video Tutorials | News | Publications | Download | REST API | Citing RGD | Contact

RGD DISEASE ONTOLOGY - ANNOTATIONS

{{ watchLinkText }}

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:	cystadenocarcinoma	go back to main search page
Accession:	DOID:3111	browse the term
Definition:	An adenocarcinoma that derives_from epithelial cells originating in glandular tissue, in which cystic accumulations of retained secretions are formed. (DO)
Synonyms:	exact_synonym:	cystadenocarcinomas
	primary_id:	MESH:D003536
	xref:	EFO:0006387; ICDO:8440/3; NCI:C2971
For additional species annotation, visit the Alliance of Genome Resources.

show annotations for term's descendants Sort by:
Rat (21) Mouse (21) Human (564) Chinchilla (21) Bonobo (21) Dog (21) Squirrel (21) Pig (21) Green Monkey (21) Naked Mole-rat (21) All
Genes (21)

endometrial serous adenocarcinoma

term browser

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

G

ATM serine/threonine kinase

ClinVar Annotator: match by term: Endometrial serous adenocarcinoma

NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437

G

BRCA2, DNA repair associated

susceptibility

DNA:deletion: :6174delT

RGD

NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567

mucinous cystadenocarcinoma

term browser

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

G

luteinizing hormone/choriogonadotropin receptor

RGD

NCBI chr 6:5,661,871...5,728,109
Ensembl chr 6:5,661,871...5,724,521

G

serum/glucocorticoid regulated kinase 1

RGD

NCBI chr 1:22,980,257...23,098,122
Ensembl chr 1:22,980,261...23,098,283

ovarian serous cystadenocarcinoma

term browser

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

G

beta-2 microglobulin

ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma

NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766

G

baculoviral IAP repeat-containing 3

exacerbates

mRNA:increased expression:ovary (human)

NCBI chr 8:5,000,844...5,028,470
Ensembl chr 8:5,000,845...5,015,802

G

B-Raf proto-oncogene, serine/threonine kinase

ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma

PMID:24033266 PMID:24446311 PMID:25157968 PMID:25741868 PMID:26619011 More...

NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463

G

erb-b2 receptor tyrosine kinase 2

ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma

PMID:22908275 PMID:26619011

NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078

G

F-box and WD repeat domain containing 7

ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma

PMID:25741868 PMID:26619011

NCBI chr 2:170,149,706...170,311,536
Ensembl chr 2:170,149,694...170,309,941

G

HRas proto-oncogene, GTPase

ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma

PMID:11150980 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 More...

NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615

G

leucine rich repeat containing 56

ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma

PMID:11150980 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 More...

NCBI chr 1:196,299,843...196,315,170
Ensembl chr 1:196,299,846...196,315,172

G

NRAS proto-oncogene, GTPase

ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma

PMID:1654209 PMID:2278970 PMID:2674680 PMID:3122217 PMID:6587382 More...

NCBI chr 2:190,582,885...190,593,509
Ensembl chr 2:190,582,918...190,591,626

G

phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha

ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma

PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 More...

NCBI chr 2:115,175,275...115,249,034
Ensembl chr 2:115,174,984...115,249,032

G

protein phosphatase 2 scaffold subunit A alpha

ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma

PMID:25741868 PMID:26168268 PMID:26619011 PMID:28492532 PMID:31687265 More...

NCBI chr 1:60,540,223...60,559,467
Ensembl chr 1:60,540,194...60,560,129

G

tumor protein p53

ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma

PMID:124622 PMID:253702 PMID:960674 PMID:1349175 PMID:1359493 More...

NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524

ovary serous adenocarcinoma

term browser

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

G

AT-rich interaction domain 1A

ClinVar Annotator: match by term: Primary low grade serous adenocarcinoma of ovary

NCBI chr 5:145,908,173...145,981,552
Ensembl chr 5:145,908,181...145,985,564

G

BRCA1, DNA repair associated

ClinVar Annotator: match by term: Ovarian serous surface papillary adenocarcinoma

PMID:16084575 PMID:16455195 PMID:16949048 PMID:17100994 PMID:19656164 More...

NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304

G

BRCA2, DNA repair associated

ClinVar Annotator: match by term: Ovarian serous surface papillary adenocarcinoma

PMID:16793542 PMID:18704680 PMID:25741868

NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567

G

basigin (Ok blood group)

protein:increased expression:ovary

RGD

NCBI chr 7:9,993,170...10,000,387
Ensembl chr 7:9,993,170...10,000,387

G

KRAS proto-oncogene, GTPase

ClinVar Annotator: match by term: Primary low grade serous adenocarcinoma of ovary

PMID:2278970 PMID:3122217 PMID:7773929 PMID:8439212 PMID:12460918 More...

NCBI chr 4:178,185,418...178,218,484

G

tumor protein p53

DNA, protein:loss of heterozygosity, increased expression:ovary

RGD

NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524

serous cystadenocarcinoma

term browser

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

G

cyclin-dependent kinase inhibitor 1A

disease_progression

RGD

NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585

G

luteinizing hormone/choriogonadotropin receptor

RGD

NCBI chr 6:5,661,871...5,728,109
Ensembl chr 6:5,661,871...5,724,521

G

serum/glucocorticoid regulated kinase 1

RGD

NCBI chr 1:22,980,257...23,098,122
Ensembl chr 1:22,980,261...23,098,283

G

tumor protein p53

disease_progression

RGD

NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524

G

XPC complex subunit, DNA damage recognition and repair factor

disease_progression

DNA:SNPs: :rs1124303, rs3731108 (human)

RGD

NCBI chr 4:123,993,670...124,020,922
Ensembl chr 4:123,993,666...124,021,010

Term paths to the root

Path 1
Term	Annotations
disease	18969
disease of cellular proliferation	7691
Neoplasms by Histologic Type	5287
Glandular and Epithelial Neoplasms	3739
Cystic, Mucinous, and Serous Neoplasms	42
cystadenocarcinoma	21
Florid Cystic Endosalpingiosis of the Uterus	0
bile duct cystadenocarcinoma	0
mucinous cystadenocarcinoma +	2
ovarian cystadenocarcinoma +	11
pancreatic cystadenocarcinoma +	0
papillary cystadenocarcinoma	0
serous cystadenocarcinoma +	21
Path 2
Term	Annotations
disease	18969
disease of cellular proliferation	7691
cancer	5508
cell type cancer	3761
carcinoma	3202
adenocarcinoma	1713
cystadenocarcinoma	21
Florid Cystic Endosalpingiosis of the Uterus	0
bile duct cystadenocarcinoma	0
mucinous cystadenocarcinoma +	2
ovarian cystadenocarcinoma +	11
pancreatic cystadenocarcinoma +	0
papillary cystadenocarcinoma	0
serous cystadenocarcinoma +	21

paths to the root