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Gene: Lrrc56 (leucine rich repeat containing 56) Rattus norvegicus
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Symbol: Lrrc56
Name: leucine rich repeat containing 56
Description: Predicted to be involved in cell projection organization. Predicted to localize to the cilium. Human ortholog(s) of this gene implicated in primary ciliary dyskinesia. Orthologous to human LRRC56 (leucine rich repeat containing 56); INTERACTS WITH (+)-schisandrin B; 2-methoxyethanol; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: leucine-rich repeat-containing protein 56; LOC365389; MGC114503; RGD1311654; similar to RIKEN cDNA 5730427C23
Orthologs:
Homo sapiens (human) : LRRC56 (leucine rich repeat containing 56)  HGNC  Alliance
Mus musculus (house mouse) : Lrrc56 (leucine rich repeat containing 56)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lrrc56 (leucine rich repeat containing 56)
Pan paniscus (bonobo/pygmy chimpanzee) : LRRC56 (leucine rich repeat containing 56)
Canis lupus familiaris (dog) : LRRC56 (leucine rich repeat containing 56)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lrrc56 (leucine rich repeat containing 56)
Sus scrofa (pig) : LRRC56 (leucine rich repeat containing 56)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01214,182,232 - 214,197,184 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1214,182,830 - 214,197,184 (+)Ensembl
Rnor_5.01221,099,377 - 221,114,723 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41201,390,131 - 201,404,485 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11201,541,130 - 201,555,485 (+)NCBI
Celera1193,934,697 - 193,949,044 (+)NCBICelera
Cytogenetic Map1q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Lrrc56
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311654
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.