Svtms_m QTL Report (Mus musculus) - Rat Genome Database

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QTL: Svtms_m (survival time modifier of Sod2 (mouse)) Mus musculus

Symbol: Svtms_m
Name: survival time modifier of Sod2 (mouse)
RGD ID: 4142334
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3913107,613,580 - 119,476,372MOUSEQTLGRCm39
GRCm3813107,477,080 - 119,339,836MOUSEQTLGRCm38
MGSCv3713108,267,160 - 120,128,643 (+)MOUSEQTLGRCm37
cM Map1359.18MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Svtms_mMousemortality/aging  IEA 704405Created by mouse qtl pipelineMGIPMID:16497723
Svtms_mMousepostnatal lethality, complete penetrance  IAGP 5509061 MGIPMID:16497723

#
Reference Title
Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
PMID:16497723  



1 to 20 of 366 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1607812AI197445expressed sequence AI19744513107606322107615688Mouse
9614640Gm31803predicted gene, 3180313107629775107641026Mouse
9638649Gm32004predicted gene, 3200413107660132107701900Mouse
9673859Gm31920predicted gene, 3192013107677485107724443Mouse
9660524Gm32090predicted gene, 3209013107741849107749349Mouse
9627085Gm32186predicted gene, 3218613107772252107800633Mouse
15017256Gm52061predicted gene, 5206113107823720107825915Mouse
16103231700006H21RikRIKEN cDNA 1700006H21 gene13107823932107828703Mouse
401714371LOC131385859STARR-seq mESC enhancer starr_3558313107845672107847775Mouse
1315348Zswim6zinc finger SWIM-type containing 613107861152108026598Mouse
401705182LOC131385860STARR-seq mESC enhancer starr_3558413107910671107911889Mouse
163700198LOC128927178CapStarr-seq enhancer MGSCv37_chr13:108627410-10862759813107973751107973939Mouse
401832343LOC132443171STARR-positive B cell enhancer ABC_E727713107993746107994047Mouse
39129194Gm53812predicted gene, 5381213107997253108022087Mouse
401841974LOC132443172STARR-positive B cell enhancer ABC_E310013108026557108026858Mouse
10009308Gm41053predicted gene, 4105313108059945108066581Mouse
10009868Gm38557predicted gene, 3855713108081372108092623Mouse
401713302LOC131385861STARR-seq mESC enhancer starr_3558713108090248108093829Mouse
10031671Gm41054predicted gene, 4105413108114677108118150Mouse
401714660LOC131385862STARR-seq mESC enhancer starr_3558913108133822108134959Mouse

1 to 20 of 366 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match

1 to 10 of 34 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4142334Svtms_msurvival time modifier of Sod2 (mouse)Not determined13107613580119476372Mouse
1558741Ses10_msalmonella enteritidis susceptibility 10 (mouse)Not determined1382739968116740106Mouse
10043997Bw40_mbody weight QTL 40 (mouse)Not determined1479239045113239162Mouse
1301142Heal2_mwound healing/regeneration 2 (mouse)Not determined1393875267120883175Mouse
1357468Rplag_mreduced platelet aggregation (mouse)Not determined1395502130120883175Mouse
1301530Bglu2_mblood glucose level 2 (mouse)Not determined13108965303110699911Mouse
12879496Fexq2_mfear expression QTL 2 (mouse)13100741519120883175Mouse
13824989Pbsq1_mpercent broken sperm QTL 1 (mouse)13102136508112136534Mouse
4141102Sod1m_msuperoxide dismutase 1, soluble, modifier (mouse)Not determined99739968110699911Mouse
4142314Tailaq3_mtail length adjusted QTL 3 (mouse)Not determined55720354112431103Mouse

1 to 10 of 34 rows


Database
Acc Id
Source(s)
MGD MGI:3626352 MouseQtl

Note Type Note Reference