LOC110120404 (VISTA enhancer mm605) - Rat Genome Database
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Genomics
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QTLs in Region (GRCm39)
Expression
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Nucleotide Sequences
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Gene: LOC110120404 (VISTA enhancer mm605) Mus musculus
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Analyze
General
Array IDs
Symbol:
LOC110120404
Name:
VISTA enhancer mm605
RGD ID:
39129191
Description:
This locus represents a conserved genomic element that can function as an enhancer. It can activate a Hsp68 promoter coupled to a LacZ reporter gene in transgenic mice. [provided by RefSeq, Jun 2015]
Type:
biological-region
RefSeq Status:
PROVISIONAL
Previously known as:
Rr1353
Latest Assembly:
GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse Assembly
Chr
Position (strand)
Source
Genome Browsers
JBrowse
NCBI
UCSC
Ensembl
GRCm39
13
118,987,009 - 118,987,926 (+)
NCBI
GRCm39
GRCm39
mm39
GRCm38
13
118,850,473 - 118,851,390 (+)
NCBI
GRCm38
GRCm38
mm10
GRCm38
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Annotation
Click to see Annotation Summary View
References
Additional References at PubMed
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PMID:
17130149
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Genomics
.
Variants
.
Variants in LOC110120404
17 total Variants
QTLs in Region (GRCm39)
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The following
QTLs
overlap with this region.
Full Report
CSV
TAB
Printer
Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4142334
Svtms_m
survival time modifier of Sod2 (mouse)
Not determined
13
107613580
119476372
Mouse
1301142
Heal2_m
wound healing/regeneration 2 (mouse)
Not determined
13
93875267
120883175
Mouse
1357468
Rplag_m
reduced platelet aggregation (mouse)
Not determined
13
95502130
120883175
Mouse
12879496
Fexq2_m
fear expression QTL 2 (mouse)
13
100741519
120883175
Mouse
14700691
Cisaq1_m
coxsackieviral infection serum ALT QTL 1 (mouse)
13
86148119
120461536
Mouse
4141704
Hipq1_m
hyperinsulin production QTL 1 (mouse)
Not determined
110409487
119476372
Mouse
1300939
Hrtfm6_m
heart failure modifier 6 (mouse)
Not determined
13
91383692
120883175
Mouse
4140995
Fbtq6_m
femoral bone trait QTL 6 (mouse)
Not determined
13
86341617
120341758
Mouse
1558763
Gct9_m
granulosa cell tumorigenesis 9 (mouse)
Not determined
13
95036824
120883175
Mouse
4142338
Skmw18_m
skeletal muscle weight 18 (mouse)
Not determined
13
94528399
120883175
Mouse
1300876
Tanidd2_m
tally ho associated non-insulin dependednt diabetes mellitus 2 (mouse)
Not determined
13
91965303
120883175
Mouse
14746974
Manh75_m
mandible shape 75 (mouse)
13
99386647
120883175
Mouse
4142400
Tgq24_m
triglyceride QTL 24 (mouse)
Not determined
102602630
120883175
Mouse
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Expression
RNA-SEQ Expression
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
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Sequence
Nucleotide Sequences
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RefSeq Transcripts
NG_054467
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
GenBank Nucleotide
AC163743
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
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Additional Information
External Database Links
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Database
Acc Id
Source(s)
NCBI Gene
LOC110120404
ENTREZGENE
PhenoGen
LOC110120404
PhenoGen
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