Gm15323 (predicted gene 15323) - Rat Genome Database

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Gene: Gm15323 (predicted gene 15323) Mus musculus
Analyze
Symbol: Gm15323
Name: predicted gene 15323
RGD ID: 9661189
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3913112,137,543 - 112,148,772 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl13112,137,510 - 112,185,430 (+)EnsemblGRCm39 Ensembl
GRCm3813112,001,009 - 112,012,238 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl13112,005,502 - 112,017,332 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map13D2.2NCBI
cM Map1363.73NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:24316575  


Genomics

Variants

.
Variants in Gm15323
483 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:151
Count of miRNA genes:143
Interacting mature miRNAs:149
Transcripts:ENSMUST00000156109
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142334Svtms_msurvival time modifier of Sod2 (mouse)Not determined13107613580119476372Mouse
1558741Ses10_msalmonella enteritidis susceptibility 10 (mouse)Not determined1382739968116740106Mouse
10043997Bw40_mbody weight QTL 40 (mouse)Not determined1479239045113239162Mouse
1301142Heal2_mwound healing/regeneration 2 (mouse)Not determined1393875267120883175Mouse
1357468Rplag_mreduced platelet aggregation (mouse)Not determined1395502130120883175Mouse
12879496Fexq2_mfear expression QTL 2 (mouse)13100741519120883175Mouse
4142314Tailaq3_mtail length adjusted QTL 3 (mouse)Not determined55720354112431103Mouse
4141992W6q16_mweight 6 weeks QTL 16 (mouse)Not determined55720354112431103Mouse
1300939Hrtfm6_mheart failure modifier 6 (mouse)Not determined1391383692120883175Mouse
4142241Tailq3_mtail length QTL 3 (mouse)Not determined55720354112431103Mouse
1300876Tanidd2_mtally ho associated non-insulin dependednt diabetes mellitus 2 (mouse)Not determined1391965303120883175Mouse
4141728Egaq4_mearly growth adjusted QTL 4 (mouse)Not determined87901985112431103Mouse
4140959W10q17_mweight 10 weeks QTL 17 (mouse)Not determined55720354112431103Mouse
4141266Mol3_mmodifier of LPS-response 3 (mouse)Not determined76132600112431103Mouse
10045623Heal18_mwound healing regeneration 18 (mouse)Not determined1379239045113239162Mouse
14700691Cisaq1_mcoxsackieviral infection serum ALT QTL 1 (mouse)1386148119120461536Mouse
4141704Hipq1_mhyperinsulin production QTL 1 (mouse)Not determined110409487119476372Mouse
1558763Gct9_mgranulosa cell tumorigenesis 9 (mouse)Not determined1395036824120883175Mouse
4140995Fbtq6_mfemoral bone trait QTL 6 (mouse)Not determined1386341617120341758Mouse
4142147Mvwf4_mmodifier of von Willebrand factor 4 (mouse)Not determined20477612112898424Mouse
4142338Skmw18_mskeletal muscle weight 18 (mouse)Not determined1394528399120883175Mouse
4141826Tbqt5_mtibia bone quality traits 5 (mouse)Not determined13103341617117043216Mouse
4142465Pbwg17_mpostnatal body weight growth 17 (mouse)Not determined1383876060117876256Mouse
4142400Tgq24_mtriglyceride QTL 24 (mouse)Not determined102602630120883175Mouse
14746974Manh75_mmandible shape 75 (mouse)1399386647120883175Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_382920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC119266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000156109
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13112,142,036 - 112,153,866 (+)Ensembl
GRCm38.p6 Ensembl13112,005,502 - 112,017,332 (+)Ensembl
Ensembl Acc Id: ENSMUST00000280192
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13112,137,513 - 112,184,918 (+)Ensembl
Ensembl Acc Id: ENSMUST00000280193
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13112,137,514 - 112,184,856 (+)Ensembl
Ensembl Acc Id: ENSMUST00000280194
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13112,137,514 - 112,176,070 (+)Ensembl
Ensembl Acc Id: ENSMUST00000280195
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13112,137,514 - 112,176,068 (+)Ensembl
Ensembl Acc Id: ENSMUST00000280196
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13112,155,569 - 112,185,419 (+)Ensembl
Ensembl Acc Id: ENSMUST00000280197
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13112,155,628 - 112,185,430 (+)Ensembl
Ensembl Acc Id: ENSMUST00000280198
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13112,155,582 - 112,176,068 (+)Ensembl
Ensembl Acc Id: ENSMUST00000280199
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13112,137,510 - 112,154,035 (+)Ensembl
Ensembl Acc Id: ENSMUST00000280200
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13112,137,513 - 112,154,030 (+)Ensembl
Ensembl Acc Id: ENSMUST00000280201
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13112,137,518 - 112,154,030 (+)Ensembl
Ensembl Acc Id: ENSMUST00000280202
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13112,137,514 - 112,148,415 (+)Ensembl
Ensembl Acc Id: ENSMUST00000280203
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13112,137,513 - 112,148,402 (+)Ensembl
Ensembl Acc Id: ENSMUST00000280204
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13112,180,339 - 112,184,795 (+)Ensembl
RefSeq Acc Id: XR_382920
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3913112,137,543 - 112,148,772 (+)NCBI
GRCm3813112,001,009 - 112,012,238 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000086092 Ensembl
MGD MGI:3705285 ENTREZGENE
NCBI Gene Gm15323 ENTREZGENE
PhenoGen Gm15323 PhenoGen