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ONTOLOGY REPORT - ANNOTATIONS

Term:plasma membrane bounded cell projection cytoplasm
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Accession:GO:0032838 term browser browse the term
Definition:All of the contents of a plasma membrane bounded cell projection, excluding the plasma membrane surrounding the projection.

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plasma membrane bounded cell projection cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNTF ciliary neurotrophic factor ISO processes of nerve-ensheathing cells of the olfactory bulb RGD PMID:12849744 RGD:1358521 NCBI chr 1:14,724,562...14,730,698
Ensembl chr 1:14,728,383...14,730,150 		JBrowse link
G LOC103226928 aldo-keto reductase family 1 member B1 ISO RGD PMID:8150024 RGD:8548684 NCBI chr21:103,060,018...103,076,844
Ensembl chr21:103,059,991...103,077,341 		JBrowse link
G RANBP1 RAN binding protein 1 ISO RGD PMID:18667152 RGD:9835000 NCBI chr19:5,611,968...5,622,414
Ensembl chr19:5,612,268...5,622,191 		JBrowse link
axon cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR10 actin related protein 10 located_in IEA GOC GO_REF:0000108 NCBI chr24:35,392,500...35,427,233
Ensembl chr24:35,392,570...35,428,713 		JBrowse link
G AP3B1 adaptor related protein complex 3 subunit beta 1 located_in IEA GOC GO_REF:0000108 NCBI chr 4:72,225,658...72,524,971
Ensembl chr 4:72,225,599...72,524,933 		JBrowse link
G AP3B2 adaptor related protein complex 3 subunit beta 2 located_in IEA GOC GO_REF:0000108 NCBI chr29:2,943,836...2,994,655
Ensembl chr29:2,943,919...2,994,700 		JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 located_in IEA GOC GO_REF:0000108 NCBI chr 6:1,901,669...1,951,352
Ensembl chr 6:1,901,507...1,951,314 		JBrowse link
G AP3M1 adaptor related protein complex 3 subunit mu 1 located_in IEA GOC GO_REF:0000108 NCBI chr 9:57,222,363...57,251,593
Ensembl chr 9:57,230,801...57,251,616 		JBrowse link
G AP3M2 adaptor related protein complex 3 subunit mu 2 located_in IEA GOC GO_REF:0000108 NCBI chr 8:40,142,577...40,161,013
Ensembl chr 8:40,142,666...40,161,008 		JBrowse link
G AP3S1 adaptor related protein complex 3 subunit sigma 1 located_in IEA GOC GO_REF:0000108 NCBI chr23:19,087,684...19,158,201
Ensembl chr23:19,087,698...19,150,979 		JBrowse link
G ARL8A ARF like GTPase 8A located_in IEA GOC GO_REF:0000108 NCBI chr25:27,261,506...27,272,477
Ensembl chr25:27,261,562...27,271,416 		JBrowse link
G ARL8B ARF like GTPase 8B located_in IEA GOC GO_REF:0000108 NCBI chr22:41,192,458...41,247,048
Ensembl chr22:41,192,484...41,244,822 		JBrowse link
G ARMCX3 armadillo repeat containing X-linked 3 located_in IEA GOC GO_REF:0000108 NCBI chr  X:89,936,812...89,941,519
Ensembl chr  X:89,938,667...89,939,806 		JBrowse link
G BLOC1S5 biogenesis of lysosomal organelles complex 1 subunit 5 located_in IEA GOC GO_REF:0000108 NCBI chr17:64,095,766...64,149,918
Ensembl chr17:64,095,826...64,147,537 		JBrowse link
G BSN bassoon presynaptic cytomatrix protein located_in ISO PMID:19380881 SynGO-UCL PMID:19380881 RGD:12793047 NCBI chr22:10,953,901...11,066,892
Ensembl chr22:11,018,966...11,059,701 		JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C ISO RGD PMID:10408625 RGD:11556226 (All species) (All species) NCBI chr11:2,107,722...2,753,970
Ensembl chr11:2,508,705...2,752,991 		JBrowse link
G DTNBP1 dystrobrevin binding protein 1 located_in IEA GOC GO_REF:0000108 NCBI chr17:56,500,523...56,650,925
Ensembl chr17:56,500,574...56,651,491 		JBrowse link
G DYNC1I1 dynein cytoplasmic 1 intermediate chain 1 located_in ISO PMID:19380881 SynGO-UCL PMID:19380881 RGD:12793047 NCBI chr21:52,950,983...53,271,113
Ensembl chr21:52,950,874...53,271,130 		JBrowse link
G DYNLL1 dynein light chain LC8-type 1 ISO RGD PMID:19641106 RGD:13207432 NCBI chr11:115,851,020...115,855,526
Ensembl chr11:115,851,381...115,851,647 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha located_in IEA GOC GO_REF:0000108 NCBI chr24:38,873,830...38,927,657
Ensembl chr24:38,873,861...38,928,288 		JBrowse link
G KIF3A kinesin family member 3A ISO RGD PMID:15266650 RGD:11049593 NCBI chr23:35,496,770...35,554,536
Ensembl chr23:35,514,130...35,551,472 		JBrowse link
G MADD MAP kinase activating death domain located_in ISO (MGI:6189386|PMID:18849981) GOC PMID:18849981 MGI:6189386 NCBI chr 1:17,987,573...18,041,317
Ensembl chr 1:17,986,860...18,042,266 		JBrowse link
G MGARP mitochondria localized glutamic acid rich protein located_in IEA GOC GO_REF:0000108 NCBI chr 7:86,233,666...86,246,218
Ensembl chr 7:86,233,448...86,245,975 		JBrowse link
G NDEL1 nudE neurodevelopment protein 1 like 1 located_in IEA GOC GO_REF:0000108 NCBI chr16:7,797,858...7,831,211 JBrowse link
G NETO1 neuropilin and tolloid like 1 located_in IEA GOC GO_REF:0000108 NCBI chr18:6,956,629...7,082,135
Ensembl chr18:6,957,091...7,076,892 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 located_in IEA GOC GO_REF:0000108 NCBI chr16:2,270,126...2,293,705
Ensembl chr16:2,270,085...2,296,825 		JBrowse link
G RANBP1 RAN binding protein 1 ISO RGD PMID:18667152 RGD:9835000 NCBI chr19:5,611,968...5,622,414
Ensembl chr19:5,612,268...5,622,191 		JBrowse link
G RANGAP1 Ran GTPase activating protein 1 ISO RGD PMID:18667152 RGD:9835000 NCBI chr19:23,789,839...23,829,653
Ensembl chr19:23,788,241...23,829,631 		JBrowse link
G SNAPIN SNAP associated protein located_in IEA GOC GO_REF:0000108 NCBI chr20:10,147,577...10,150,721
Ensembl chr20:10,148,099...10,150,641 		JBrowse link
G SPAST spastin located_in IEA GOC GO_REF:0000108 NCBI chr14:75,343,437...75,429,196
Ensembl chr14:75,343,327...75,429,139 		JBrowse link
G SPG7 SPG7 matrix AAA peptidase subunit, paraplegin located_in IEA GOC GO_REF:0000108 NCBI chr 5:74,862,524...74,916,214
Ensembl chr 5:74,862,551...74,916,033 		JBrowse link
G SYBU syntabulin located_in IEA GOC GO_REF:0000108 NCBI chr 8:104,274,092...104,390,051
Ensembl chr 8:104,273,217...104,344,348 		JBrowse link
G TMEM108 transmembrane protein 108 located_in IEA GOC GO_REF:0000108 NCBI chr15:56,921,064...57,248,199
Ensembl chr15:56,921,069...57,200,901 		JBrowse link
G TRAK1 trafficking kinesin protein 1 located_in IEA GOC GO_REF:0000108 NCBI chr22:3,536,589...3,668,622
Ensembl chr22:3,446,484...3,668,347 		JBrowse link
G TRAK2 trafficking kinesin protein 2 located_in IEA GOC GO_REF:0000108 NCBI chr10:87,022,038...87,096,685
Ensembl chr10:87,022,043...87,096,666 		JBrowse link
G TRIM46 tripartite motif containing 46 located_in IEA GOC GO_REF:0000108 NCBI chr20:8,647,598...8,659,674
Ensembl chr20:8,648,373...8,658,600 		JBrowse link
G UCHL1 ubiquitin C-terminal hydrolase L1 located_in IEA GOC GO_REF:0000108 NCBI chr27:9,074,961...9,086,606
Ensembl chr27:9,074,923...9,086,517 		JBrowse link
G ZC3H14 zinc finger CCCH-type containing 14 located_in IEA Ensembl GO_REF:0000107 NCBI chr24:66,200,140...66,249,343
Ensembl chr24:66,200,181...66,249,210 		JBrowse link
axonemal A tubule inner sheath term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFAP107 cilia and flagella associated protein 107 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr20:119,032,143...119,047,632
Ensembl chr20:119,029,021...119,047,323 		JBrowse link
G CFAP141 cilia and flagella associated protein 141 is_active_in ISO (PMID:37295417)
(PMID:37295417), (PMID:37865089), (PMID:37989994)		 MGI
UniProt		 PMID:37295417 PMID:37865089 PMID:37989994 NCBI chr20:9,615,258...9,622,816
Ensembl chr20:9,615,288...9,622,752 		JBrowse link
G CFAP161 cilia and flagella associated protein 161 located_in
is_active_in		 IEA
ISO		 (PMID:37295417) Ensembl
MGI		 PMID:37295417 GO_REF:0000107 NCBI chr26:2,242,522...2,257,405
Ensembl chr26:2,242,304...2,257,047 		JBrowse link
G CFAP53 cilia and flagella associated protein 53 is_active_in ISO (PMID:37295417)
(PMID:37295417), (PMID:37865089), (PMID:37989994)		 MGI PMID:37295417 PMID:37865089 PMID:37989994 NCBI chr18:30,690,451...30,731,711
Ensembl chr18:30,691,006...30,725,354 		JBrowse link
G CFAP68 cilia and flagella associated protein 68 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr 1:103,229,236...103,234,073
Ensembl chr 1:103,231,439...103,234,056 		JBrowse link
G CFAP95 cilia and flagella associated protein 95 located_in
is_active_in		 IEA
ISO		 (PMID:37295417), (PMID:37865089), (PMID:37989994) Ensembl
UniProt
MGI		 PMID:37295417 PMID:37865089 PMID:37989994 GO_REF:0000107 NCBI chr12:80,880,740...80,967,535
Ensembl chr12:80,881,092...80,970,151 		JBrowse link
G CIMIP2A ciliary microtubule inner protein 2A located_in
is_active_in		 IEA
ISO		 (PMID:37295417), (PMID:37989994) Ensembl
UniProt
MGI		 PMID:37295417 PMID:37989994 GO_REF:0000107 NCBI chr12:940,991...945,768
Ensembl chr12:941,485...945,650 		JBrowse link
G CIMIP2B ciliary microtubule inner protein 2B is_active_in ISO (PMID:37865089) UniProt PMID:37865089 NCBI chr12:44,991,633...45,041,573
Ensembl chr12:45,039,593...45,041,415 		JBrowse link
G CIMIP2C ciliary microtubule inner protein 2C is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr14:81,059,408...81,077,554
Ensembl chr14:81,057,764...81,076,400 		JBrowse link
G DUSP21 dual specificity phosphatase 21 located_in
is_active_in		 IEA
ISO		 (PMID:37295417), (PMID:37989994) Ensembl
MGI		 PMID:37295417 PMID:37989994 GO_REF:0000107 NCBI chr  X:42,026,725...42,040,716
Ensembl chr  X:42,027,711...42,028,280 		JBrowse link
G EFCAB6 EF-hand calcium binding domain 6 located_in
is_active_in		 IEA
ISO		 (PMID:37295417), (PMID:37865089), (PMID:37989994) Ensembl
MGI		 PMID:37295417 PMID:37865089 PMID:37989994 GO_REF:0000107 NCBI chr19:26,023,566...26,327,309
Ensembl chr19:26,023,643...26,295,493 		JBrowse link
G EFHB EF-hand domain family member B located_in
is_active_in		 IEA
ISO		 (PMID:37295417), (PMID:37865089), (PMID:37989994) Ensembl
UniProt
MGI		 PMID:37295417 PMID:37865089 PMID:37989994 GO_REF:0000107 NCBI chr15:64,608,440...64,679,276
Ensembl chr15:64,608,604...64,661,298 		JBrowse link
G EFHC1 EF-hand domain containing 1 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr17:20,011,684...20,083,639
Ensembl chr17:20,011,530...20,083,592 		JBrowse link
G EFHC2 EF-hand domain containing 2 is_active_in ISO (PMID:37295417)
(PMID:37295417), (PMID:37865089), (PMID:37989994)		 MGI PMID:37295417 PMID:37865089 PMID:37989994 NCBI chr  X:41,315,664...41,513,778
Ensembl chr  X:41,317,034...41,513,669 		JBrowse link
G MNS1 meiosis specific nuclear structural 1 is_active_in ISO (PMID:37295417)
(PMID:37295417), (PMID:37865089), (PMID:37989994)		 MGI PMID:37295417 PMID:37865089 PMID:37989994 NCBI chr26:27,026,932...27,060,044
Ensembl chr26:27,027,827...27,059,863 		JBrowse link
G NME7 NME/NM23 family member 7 is_active_in ISO (PMID:37295417)
(PMID:37295417), (PMID:37865089), (PMID:37989994)		 MGI PMID:37295417 PMID:37865089 PMID:37989994 NCBI chr25:59,685,437...59,899,458
Ensembl chr25:59,685,531...59,898,677 		JBrowse link
G PIERCE1 piercer of microtubule wall 1 located_in
is_active_in		 IEA
ISO		 (PMID:37295417) Ensembl
MGI		 PMID:37295417 GO_REF:0000107 NCBI chr12:2,669,623...2,674,929
Ensembl chr12:2,670,241...2,675,646 		JBrowse link
G PIERCE2 piercer of microtubule wall 2 located_in
is_active_in		 IEA
ISO		 (PMID:37295417), (PMID:37865089), (PMID:37989994) Ensembl
MGI		 PMID:37295417 PMID:37865089 PMID:37989994 GO_REF:0000107 NCBI chr26:28,023,735...28,029,095
Ensembl chr26:28,023,603...28,028,929 		JBrowse link
G RIBC1 RIB43A domain with coiled-coils 1 located_in
is_active_in		 IEA
ISO		 (PMID:37295417) Ensembl
MGI		 PMID:37295417 GO_REF:0000107 NCBI chr  X:49,558,565...49,568,058
Ensembl chr  X:49,563,175...49,571,292 		JBrowse link
G RIBC2 RIB43A domain with coiled-coils 2 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr19:27,879,777...27,900,198
Ensembl chr19:27,879,972...27,900,659 		JBrowse link
G SAXO4 stabilizer of axonemal microtubules 4 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr 1:12,363,484...12,373,223
Ensembl chr 1:12,363,843...12,372,272 		JBrowse link
G SPAG8 sperm associated antigen 8 located_in
is_active_in		 IEA
ISO		 (PMID:37295417), (PMID:37865089), (PMID:37989994) Ensembl
UniProt
MGI		 PMID:37295417 PMID:37865089 PMID:37989994 GO_REF:0000107 NCBI chr12:44,792,661...44,795,736
Ensembl chr12:44,793,253...44,800,474 		JBrowse link
G SPMIP11 sperm microtubule inner protein 11 is_active_in ISO (PMID:37295417) MGI PMID:37295417
G SPMIP5 sperm microtubule inner protein 5 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr 9:109,470,751...109,478,504 JBrowse link
G SPMIP6 sperm microtubule inner protein 6 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr12:46,215,162...46,234,101
Ensembl chr12:46,215,619...46,234,044 		JBrowse link
G SPMIP8 sperm microtubule inner protein 8 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr 5:43,907,070...43,918,918
Ensembl chr 5:43,908,124...43,918,775 		JBrowse link
G SPMIP9 sperm microtubule inner protein 9 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr14:18,235,550...18,240,912
Ensembl chr14:18,235,667...18,239,527 		JBrowse link
G TEKT1 tektin 1 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr16:6,161,826...6,184,735
Ensembl chr16:6,159,008...6,184,711 		JBrowse link
G TEKT2 tektin 2 located_in
is_active_in		 IEA
ISO		 (PMID:37295417), (PMID:37865089), (PMID:37989994) Ensembl
UniProt
MGI		 PMID:37295417 PMID:37865089 PMID:37989994 GO_REF:0000107 NCBI chr20:96,768,427...96,772,462
Ensembl chr20:96,768,320...96,772,233 		JBrowse link
G TEKT3 tektin 3 located_in
is_active_in		 IEA
ISO		 (PMID:37295417), (PMID:37865089), (PMID:37989994) Ensembl
UniProt
MGI		 PMID:37295417 PMID:37865089 PMID:37989994 GO_REF:0000107 NCBI chr16:14,602,629...14,641,304
Ensembl chr16:14,602,753...14,630,773 		JBrowse link
G TEKT4 tektin 4 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr12:108,535,947...108,543,823
Ensembl chr12:108,535,895...108,541,359 		JBrowse link
G TEKT5 tektin 5 located_in
is_active_in		 IEA
ISO		 PMID:17924527
(PMID:37295417)		 Ensembl
UniProt
MGI		 PMID:17924527 PMID:37295417 GO_REF:0000107 RGD:405866203 NCBI chr 5:10,106,537...10,172,758
Ensembl chr 5:10,106,400...10,172,237 		JBrowse link
G TEKTIP1 tektin bundle interacting protein 1 located_in
is_active_in		 IEA
ISO		 (PMID:37295417) Ensembl
MGI		 PMID:37295417 GO_REF:0000107 NCBI chr 6:3,302,165...3,307,687
Ensembl chr 6:3,302,771...3,307,664 		JBrowse link
axonemal B tubule inner sheath term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFAP126 cilia and flagella associated protein 126 is_active_in ISO (PMID:37295417)
(PMID:37295417), (PMID:37865089), (PMID:37989994)		 MGI PMID:37295417 PMID:37865089 PMID:37989994 NCBI chr20:2,608,511...2,612,088
Ensembl chr20:2,608,942...2,611,852 		JBrowse link
G CFAP144 cilia and flagella associated protein 144 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr20:89,641,849...89,650,587
Ensembl chr20:89,641,849...89,650,417 		JBrowse link
G CFAP20 cilia and flagella associated protein 20 is_active_in ISO (PMID:37295417)
(PMID:37295417), (PMID:37865089), (PMID:37989994)		 MGI
UniProt		 PMID:37295417 PMID:37865089 PMID:37989994 NCBI chr 5:44,047,860...44,063,605
Ensembl chr 5:44,047,464...44,063,738 		JBrowse link
G CFAP210 cilia and flagella associated protein 210 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr10:55,174,757...55,220,295
Ensembl chr10:55,174,315...55,220,298 		JBrowse link
G CFAP276 cilia and flagella associated protein 276 located_in
is_active_in		 IEA
ISO		 (PMID:37295417), (PMID:37865089), (PMID:37989994) Ensembl
UniProt
MGI		 PMID:37295417 PMID:37865089 PMID:37989994 GO_REF:0000107 NCBI chr20:24,430,428...24,437,685
Ensembl chr20:24,430,867...24,439,082 		JBrowse link
G CFAP45 cilia and flagella associated protein 45 is_active_in ISO (PMID:37295417)
(PMID:37295417), (PMID:37865089), (PMID:37989994)		 MGI
UniProt		 PMID:37295417 PMID:37865089 PMID:37989994 NCBI chr20:4,036,029...4,078,608
Ensembl chr20:4,050,311...4,078,587 		JBrowse link
G CFAP52 cilia and flagella associated protein 52 is_active_in ISO (PMID:37295417)
(PMID:37295417), (PMID:37865089), (PMID:37989994)		 MGI
UniProt		 PMID:37295417 PMID:37865089 PMID:37989994 NCBI chr16:8,937,515...9,000,363
Ensembl chr16:8,938,143...9,001,677 		JBrowse link
G CFAP77 cilia and flagella associated protein 77 is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr12:5,566,994...5,731,619 JBrowse link
G CFAP77 cilia and flagella associated protein 77 located_in IEA Ensembl GO_REF:0000107 Ensembl chr12:5,567,824...5,657,081 JBrowse link
G CFAP90 cilia and flagella associated protein 90 located_in
is_active_in		 IEA
ISO		 (PMID:37295417) Ensembl
MGI		 PMID:37295417 GO_REF:0000107 NCBI chr 4:7,418,409...7,439,389
Ensembl chr 4:7,419,593...7,438,946 		JBrowse link
G ENKUR enkurin, TRPC channel interacting protein is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr 9:24,710,588...24,740,173
Ensembl chr 9:24,707,109...24,740,516 		JBrowse link
G PACRG parkin coregulated is_active_in ISO (PMID:37295417) MGI PMID:37295417 NCBI chr13:90,329,583...90,937,143 JBrowse link
G SPMIP10 sperm microtubule inner protein 10 located_in
is_active_in		 IEA
ISO		 (PMID:37295417), (PMID:37989994) Ensembl
UniProt
MGI		 PMID:37295417 PMID:37989994 GO_REF:0000107 NCBI chr23:29,623,875...29,629,039
Ensembl chr23:29,624,270...29,628,993 		JBrowse link
G TEKTL1 tektin like 1 located_in
is_active_in		 IEA
ISO		 (PMID:37295417), (PMID:37865089), (PMID:37989994) Ensembl
UniProt
MGI		 PMID:37295417 PMID:37865089 PMID:37989994 GO_REF:0000107 NCBI chr 6:13,597,502...13,627,846
Ensembl chr 6:13,597,954...13,627,404 		JBrowse link
axonemal basal plate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IFT88 intraflagellar transport 88 located_in ISO (PMID:24302887) MGI PMID:24302887 NCBI chr 3:435,649...546,661
Ensembl chr 3:436,207...546,583 		JBrowse link
G WDPCP WD repeat containing planar cell polarity effector located_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:43,425,405...43,896,015
Ensembl chr14:43,526,525...43,898,300 		JBrowse link
axonemal central apparatus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HYDIN HYDIN axonemal central pair apparatus protein located_in ISO (MGI:6331463|PMID:30535028)
(PMID:30535028)		 UniProt PMID:30535028 MGI:6331463 NCBI chr 5:53,950,286...54,435,770
Ensembl chr 5:53,950,886...54,335,689 		JBrowse link
G LOC103217787 sperm-associated antigen 16 protein located_in ISO (PMID:12391165) MGI PMID:12391165 NCBI chr10:99,044,097...100,215,884 JBrowse link
G SPAG17 sperm associated antigen 17 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:15,545,340...15,780,126
Ensembl chr20:15,579,532...15,767,354 		JBrowse link
G SPEF1 sperm flagellar 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:34,462,933...34,467,575
Ensembl chr 2:34,462,896...34,466,923 		JBrowse link
axonemal central pair projection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HYDIN HYDIN axonemal central pair apparatus protein located_in ISO (PMID:18250199) MGI PMID:18250199 NCBI chr 5:53,950,286...54,435,770
Ensembl chr 5:53,950,886...54,335,689 		JBrowse link
axonemal dynein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC65 coiled-coil domain containing 65 part_of IEA InterPro GO_REF:0000002 NCBI chr11:45,146,225...45,166,152
Ensembl chr11:45,147,199...45,165,761 		JBrowse link
G DNAH2 dynein axonemal heavy chain 2 part_of ISO (MGI:6436377|PMID:30060180)
(PMID:30060180)		 UniProt PMID:30060180 MGI:6436377 NCBI chr16:7,097,581...7,220,263
Ensembl chr16:7,103,152...7,220,397 		JBrowse link
G DNAH5 dynein axonemal heavy chain 5 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 4:13,401,980...13,718,900
Ensembl chr 4:13,401,092...13,652,755 		JBrowse link
G DNAH8 dynein axonemal heavy chain 8 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr17:33,110,149...33,427,553
Ensembl chr17:33,110,289...33,419,519 		JBrowse link
G DNAH9 dynein axonemal heavy chain 9 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr16:10,947,254...11,316,414
Ensembl chr16:10,948,014...11,317,291 		JBrowse link
G DNAI2 dynein axonemal intermediate chain 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr16:47,318,477...47,348,767
Ensembl chr16:47,319,138...47,348,839 		JBrowse link
G DNAI3 dynein axonemal intermediate chain 3 part_of IEA Ensembl GO_REF:0000107 NCBI chr20:48,214,391...48,289,037
Ensembl chr20:48,214,389...48,288,196 		JBrowse link
G DNAI4 dynein axonemal intermediate chain 4 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr20:66,189,698...66,295,628
Ensembl chr20:66,189,723...66,294,478 		JBrowse link
G DNAI7 dynein axonemal intermediate chain 7 part_of ISO (MGI:6436377|PMID:30060180)
(PMID:30060180)		 UniProt PMID:30060180 MGI:6436377 NCBI chr11:24,871,767...24,953,586
Ensembl chr11:24,875,416...24,953,375 		JBrowse link
G DRC1 dynein regulatory complex subunit 1 part_of IEA InterPro GO_REF:0000002 Ensembl chr14:81,199,498...81,244,663 JBrowse link
G DYNC1H1 dynein cytoplasmic 1 heavy chain 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr24:79,915,719...80,008,666
Ensembl chr24:79,915,889...80,000,099 		JBrowse link
axonemal microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARFGEF2 ARF guanine nucleotide exchange factor 2 located_in ISO PMID:15198677 UniProt PMID:15198677 RGD:1304338 NCBI chr 2:14,947,347...15,058,217
Ensembl chr 2:14,947,351...15,030,772 		JBrowse link
G CEP162 centrosomal protein 162 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:8,798,591...8,908,782
Ensembl chr13:8,797,774...8,881,010 		JBrowse link
G CFAP107 cilia and flagella associated protein 107 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chr20:119,032,143...119,047,632
Ensembl chr20:119,029,021...119,047,323 		JBrowse link
G CFAP126 cilia and flagella associated protein 126 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,608,511...2,612,088
Ensembl chr20:2,608,942...2,611,852 		JBrowse link
G CFAP141 cilia and flagella associated protein 141 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chr20:9,615,258...9,622,816
Ensembl chr20:9,615,288...9,622,752 		JBrowse link
G CFAP144 cilia and flagella associated protein 144 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:89,641,849...89,650,587
Ensembl chr20:89,641,849...89,650,417 		JBrowse link
G CFAP161 cilia and flagella associated protein 161 located_in IEA Ensembl GO_REF:0000107 NCBI chr26:2,242,522...2,257,405
Ensembl chr26:2,242,304...2,257,047 		JBrowse link
G CFAP20 cilia and flagella associated protein 20 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chr 5:44,047,860...44,063,605
Ensembl chr 5:44,047,464...44,063,738 		JBrowse link
G CFAP210 cilia and flagella associated protein 210 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chr10:55,174,757...55,220,295
Ensembl chr10:55,174,315...55,220,298 		JBrowse link
G CFAP276 cilia and flagella associated protein 276 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:24,430,428...24,437,685
Ensembl chr20:24,430,867...24,439,082 		JBrowse link
G CFAP45 cilia and flagella associated protein 45 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chr20:4,036,029...4,078,608
Ensembl chr20:4,050,311...4,078,587 		JBrowse link
G CFAP52 cilia and flagella associated protein 52 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chr16:8,937,515...9,000,363
Ensembl chr16:8,938,143...9,001,677 		JBrowse link
G CFAP53 cilia and flagella associated protein 53 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:30,690,451...30,731,711
Ensembl chr18:30,691,006...30,725,354 		JBrowse link
G CFAP77 cilia and flagella associated protein 77 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chr12:5,566,994...5,731,619 JBrowse link
G CFAP77 cilia and flagella associated protein 77 located_in IEA Ensembl GO_REF:0000107 Ensembl chr12:5,567,824...5,657,081 JBrowse link
G CFAP95 cilia and flagella associated protein 95 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:80,880,740...80,967,535
Ensembl chr12:80,881,092...80,970,151 		JBrowse link
G CIMIP2B ciliary microtubule inner protein 2B located_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,991,633...45,041,573
Ensembl chr12:45,039,593...45,041,415 		JBrowse link
G CIMIP2C ciliary microtubule inner protein 2C located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chr14:81,059,408...81,077,554
Ensembl chr14:81,057,764...81,076,400 		JBrowse link
G EFHB EF-hand domain family member B located_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr15:64,608,440...64,679,276
Ensembl chr15:64,608,604...64,661,298 		JBrowse link
G EFHC1 EF-hand domain containing 1 located_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr17:20,011,684...20,083,639
Ensembl chr17:20,011,530...20,083,592 		JBrowse link
G EFHC2 EF-hand domain containing 2 located_in IEA UniProt GO_REF:0000117 NCBI chr  X:41,315,664...41,513,778
Ensembl chr  X:41,317,034...41,513,669 		JBrowse link
G ENKUR enkurin, TRPC channel interacting protein located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chr 9:24,710,588...24,740,173
Ensembl chr 9:24,707,109...24,740,516 		JBrowse link
G IFT70A intraflagellar transport 70A located_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr10:63,169,696...63,174,903
Ensembl chr10:63,172,665...63,174,662 		JBrowse link
G LOC103231075 stabilizer of axonemal microtubules 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:1,545,877...1,579,571
Ensembl chr29:1,546,833...1,579,513 		JBrowse link
G LOC103238261 tubulin alpha-1A chain located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chr11:45,419,046...45,423,574
Ensembl chr11:45,418,748...45,423,685 		JBrowse link
G MNS1 meiosis specific nuclear structural 1 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chr26:27,026,932...27,060,044
Ensembl chr26:27,027,827...27,059,863 		JBrowse link
G NME7 NME/NM23 family member 7 located_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr25:59,685,437...59,899,458
Ensembl chr25:59,685,531...59,898,677 		JBrowse link
G PACRG parkin coregulated located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chr13:90,329,583...90,937,143 JBrowse link
G PIERCE1 piercer of microtubule wall 1 located_in IEA InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 NCBI chr12:2,669,623...2,674,929
Ensembl chr12:2,670,241...2,675,646 		JBrowse link
G PIERCE2 piercer of microtubule wall 2 located_in IEA InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 NCBI chr26:28,023,735...28,029,095
Ensembl chr26:28,023,603...28,028,929 		JBrowse link
G RIBC2 RIB43A domain with coiled-coils 2 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chr19:27,879,777...27,900,198
Ensembl chr19:27,879,972...27,900,659 		JBrowse link
G RPGRIP1L RPGRIP1 like ISO RGD PMID:17558407 RGD:11537356 NCBI chr 5:39,388,632...39,487,223
Ensembl chr 5:39,387,107...39,487,092 		JBrowse link
G SAXO1 stabilizer of axonemal microtubules 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:60,671,508...60,788,923
Ensembl chr12:60,766,059...60,788,518 		JBrowse link
G SPACA9 sperm acrosome associated 9 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,250,367...5,263,194
Ensembl chr12:5,250,063...5,263,186 		JBrowse link
G SPAG8 sperm associated antigen 8 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,792,661...44,795,736
Ensembl chr12:44,793,253...44,800,474 		JBrowse link
G TEKT1 tektin 1 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chr16:6,161,826...6,184,735
Ensembl chr16:6,159,008...6,184,711 		JBrowse link
G TEKT2 tektin 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:96,768,427...96,772,462
Ensembl chr20:96,768,320...96,772,233 		JBrowse link
G TEKT3 tektin 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:14,602,629...14,641,304
Ensembl chr16:14,602,753...14,630,773 		JBrowse link
G TEKT4 tektin 4 located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chr12:108,535,947...108,543,823
Ensembl chr12:108,535,895...108,541,359 		JBrowse link
G TUBB4B tubulin beta 4B class IVb located_in ISO (PMID:36191189) UniProt PMID:36191189 NCBI chr12:945,643...948,087
Ensembl chr12:945,459...948,065 		JBrowse link
axonemal microtubule doublet inner sheath term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUSP3 dual specificity phosphatase 3 is_active_in ISO (PMID:37865089) UniProt PMID:37865089 NCBI chr16:62,622,667...62,637,129
Ensembl chr16:62,622,663...62,637,127 		JBrowse link
G SPACA9 sperm acrosome associated 9 located_in
is_active_in		 IEA
ISO		 (PMID:37865089), (PMID:37989994) Ensembl
UniProt		 PMID:37865089 PMID:37989994 GO_REF:0000107 NCBI chr12:5,250,367...5,263,194
Ensembl chr12:5,250,063...5,263,186 		JBrowse link
G TSSK6 testis specific serine kinase 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:17,974,174...17,975,996
Ensembl chr 6:17,974,913...17,975,734 		JBrowse link
axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK8 adenylate kinase 8 located_in ISO (PMID:33139725)
(PMID:24740601)		 GO_Central
MGI		 PMID:24740601 PMID:33139725 NCBI chr12:5,263,126...5,414,543
Ensembl chr12:5,263,266...5,414,927 		JBrowse link
G AKAP14 A-kinase anchoring protein 14 located_in IEA Ensembl GO_REF:0000107
G AMBRA1 autophagy and beclin 1 regulator 1 located_in ISO (MGI:5527012|PMID:24089209)
(PMID:24089209)		 UniProt PMID:24089209 MGI:5527012 NCBI chr 1:18,777,807...18,932,784
Ensembl chr 1:18,734,926...18,932,785 		JBrowse link
G ARL13B ARF like GTPase 13B located_in ISO (MGI:4888042|PMID:21209331)
(PMID:21209331)		 CACAO PMID:21209331 MGI:4888042 NCBI chr22:86,648,924...86,722,006
Ensembl chr22:86,651,076...86,721,948 		JBrowse link
G ARL3 ARF like GTPase 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:95,703,648...95,737,785 JBrowse link
G ARL6 ARF like GTPase 6 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:82,909,453...82,946,253
Ensembl chr22:82,905,910...82,946,149 		JBrowse link
G ATG14 autophagy related 14 located_in IEA Ensembl GO_REF:0000107 NCBI chr24:32,560,580...32,605,336
Ensembl chr24:32,559,955...32,605,282 		JBrowse link
G ATG16L1 autophagy related 16 like 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:119,286,609...119,331,226
Ensembl chr10:119,286,751...119,333,267 		JBrowse link
G ATG5 autophagy related 5 located_in ISO (MGI:5527012|PMID:24089209) UniProt PMID:24089209 MGI:5527012 NCBI chr13:67,482,538...67,619,201
Ensembl chr13:67,482,595...67,617,902 		JBrowse link
G ATG7 autophagy related 7 located_in ISO (MGI:5527012|PMID:24089209)
(PMID:24089209)		 UniProt PMID:24089209 MGI:5527012 NCBI chr22:47,187,305...47,571,309
Ensembl chr22:47,325,614...47,571,070 		JBrowse link
G BBOF1 basal body orientation factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr24:51,234,618...51,279,537
Ensembl chr24:51,234,663...51,280,595 		JBrowse link
G BBS1 Bardet-Biedl syndrome 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:7,737,887...7,765,022
Ensembl chr 1:7,737,578...7,764,732 		JBrowse link
G BBS5 Bardet-Biedl syndrome 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:54,995,928...55,021,589
Ensembl chr10:54,996,240...55,021,580 		JBrowse link
G BBS7 Bardet-Biedl syndrome 7 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:69,100,287...69,153,009
Ensembl chr 7:69,101,662...69,152,768 		JBrowse link
G BRWD1 bromodomain and WD repeat domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:83,115,290...83,245,798
Ensembl chr 2:83,113,757...83,230,423 		JBrowse link
G CAMSAP3 calmodulin regulated spectrin associated protein family member 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:7,085,113...7,104,133
Ensembl chr 6:7,085,282...7,103,885 		JBrowse link
G CCDC146 coiled-coil domain containing 146 located_in IEA Ensembl GO_REF:0000107 NCBI chr21:71,634,139...71,807,739
Ensembl chr21:71,634,069...71,807,442 		JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit located_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr15:8,730,456...8,789,379
Ensembl chr15:8,731,278...8,788,523 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit located_in IEA Ensembl GO_REF:0000107 NCBI chr16:72,004,087...72,061,889 JBrowse link
G CCDC63 coiled-coil domain containing 63 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:106,089,480...106,151,071
Ensembl chr11:106,096,208...106,151,012 		JBrowse link
G CCDC65 coiled-coil domain containing 65 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:45,146,225...45,166,152
Ensembl chr11:45,147,199...45,165,761 		JBrowse link
G CCSAP centriole, cilia and spindle associated protein located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr25:66,593,506...66,611,462
Ensembl chr25:66,589,906...66,610,999 		JBrowse link
G CENPF centromere protein F located_in IEA Ensembl GO_REF:0000107 NCBI chr25:14,914,805...14,972,811
Ensembl chr25:14,914,809...14,972,796 		JBrowse link
G CFAP107 cilia and flagella associated protein 107 located_in IEA UniProt GO_REF:0000117 NCBI chr20:119,032,143...119,047,632
Ensembl chr20:119,029,021...119,047,323 		JBrowse link
G CFAP119 cilia and flagella associated protein 119 NOT|located_in
is_active_in		 ISO PMID:27032685
(PMID:37601242)		 UniProt
MGI		 PMID:27032685 PMID:37601242 RGD:11529800 NCBI chr 5:27,444,986...27,449,614
Ensembl chr 5:27,445,039...27,449,123 		JBrowse link
G CFAP184 cilia and flagella associated protein 184 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:43,150,557...43,157,211 JBrowse link
G CFAP206 cilia and flagella associated protein 206 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:11,885,121...11,948,315
Ensembl chr13:11,894,651...11,948,310 		JBrowse link
G CFAP263 cilia and flagella associated protein 263 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:44,183,966...44,261,415
Ensembl chr 5:44,184,033...44,216,444 		JBrowse link
G CFAP36 cilia and flagella associated protein 36 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:51,360,320...51,386,815
Ensembl chr14:51,360,391...51,386,854 		JBrowse link
G CFAP43 cilia and flagella associated protein 43 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:97,179,767...97,283,267
Ensembl chr 9:97,179,647...97,283,225 		JBrowse link
G CFAP45 cilia and flagella associated protein 45 located_in ISO (PMID:33139725) GO_Central PMID:33139725 NCBI chr20:4,036,029...4,078,608
Ensembl chr20:4,050,311...4,078,587 		JBrowse link
G CFAP52 cilia and flagella associated protein 52 located_in IEA UniProt GO_REF:0000117 NCBI chr16:8,937,515...9,000,363
Ensembl chr16:8,938,143...9,001,677 		JBrowse link
G CFAP53 cilia and flagella associated protein 53 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:30,690,451...30,731,711
Ensembl chr18:30,691,006...30,725,354 		JBrowse link
G CFAP61 cilia and flagella associated protein 61 located_in ISO (PMID:35387802) MGI PMID:35387802 NCBI chr 2:49,070,744...49,352,904
Ensembl chr 2:49,074,731...49,352,616 		JBrowse link
G CFAP68 cilia and flagella associated protein 68 located_in IEA UniProt GO_REF:0000117 NCBI chr 1:103,229,236...103,234,073
Ensembl chr 1:103,231,439...103,234,056 		JBrowse link
G CFAP70 cilia and flagella associated protein 70 located_in ISO (MGI:6383288|PMID:30158508)
(PMID:30158508)		 UniProt PMID:30158508 MGI:6383288 NCBI chr 9:57,917,170...58,019,298
Ensembl chr 9:57,930,772...58,019,372 		JBrowse link
G CFAP90 cilia and flagella associated protein 90 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:7,418,409...7,439,389
Ensembl chr 4:7,419,593...7,438,946 		JBrowse link
G CTSH cathepsin H ISO RGD PMID:12838426 RGD:5686399 NCBI chr26:4,451,731...4,473,220
Ensembl chr26:4,451,774...4,472,855 		JBrowse link
G CYS1 cystin 1 located_in ISO (PMID:11854326), (PMID:19850956) MGI PMID:11854326 PMID:19850956 NCBI chr14:97,549,886...97,572,458
Ensembl chr14:97,551,009...97,570,710 		JBrowse link
G DCDC2 doublecortin domain containing 2 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:47,880,282...48,065,686
Ensembl chr17:47,881,346...48,066,436 		JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,554,454...69,586,476
Ensembl chr 5:69,554,578...69,586,365 		JBrowse link
G DNAH1 dynein axonemal heavy chain 1 located_in ISO (PMID:24360805) UniProt PMID:24360805 NCBI chr22:13,678,132...13,764,988
Ensembl chr22:13,683,487...13,764,937 		JBrowse link
G DNAH10 dynein axonemal heavy chain 10 located_in IEA UniProt GO_REF:0000117 NCBI chr11:119,098,664...119,273,913
Ensembl chr11:119,105,264...119,273,675 		JBrowse link
G DNAH11 dynein axonemal heavy chain 11 located_in IEA UniProt GO_REF:0000117 NCBI chr21:36,350,606...36,722,018
Ensembl chr21:36,350,707...36,720,511 		JBrowse link
G DNAH12 dynein axonemal heavy chain 12 located_in IEA UniProt GO_REF:0000117 NCBI chr22:18,613,937...18,860,856
Ensembl chr22:18,614,309...18,820,007 		JBrowse link
G DNAH17 dynein axonemal heavy chain 17 located_in ISO (PMID:31178125) UniProt PMID:31178125 NCBI chr16:70,422,079...70,571,126
Ensembl chr16:70,422,632...70,568,535 		JBrowse link
G DNAH2 dynein axonemal heavy chain 2 located_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr16:7,097,581...7,220,263
Ensembl chr16:7,103,152...7,220,397 		JBrowse link
G DNAH3 dynein axonemal heavy chain 3 located_in IEA UniProt GO_REF:0000117 NCBI chr 5:19,068,468...19,274,958
Ensembl chr 5:19,068,515...19,279,417 		JBrowse link
G DNAH5 dynein axonemal heavy chain 5 located_in IEA UniProt GO_REF:0000117 NCBI chr 4:13,401,980...13,718,900
Ensembl chr 4:13,401,092...13,652,755 		JBrowse link
G DNAH6 dynein axonemal heavy chain 6 located_in IEA UniProt GO_REF:0000117 NCBI chr14:22,357,139...22,712,614
Ensembl chr14:22,357,102...22,659,471 		JBrowse link
G DNAH7 dynein axonemal heavy chain 7 located_in IEA UniProt GO_REF:0000117 NCBI chr10:81,272,913...81,615,943
Ensembl chr10:81,269,432...81,604,013 		JBrowse link
G DNAH8 dynein axonemal heavy chain 8 located_in IEA UniProt GO_REF:0000117 NCBI chr17:33,110,149...33,427,553
Ensembl chr17:33,110,289...33,419,519 		JBrowse link
G DNAH9 dynein axonemal heavy chain 9 located_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr16:10,947,254...11,316,414
Ensembl chr16:10,948,014...11,317,291 		JBrowse link
G DNAI2 dynein axonemal intermediate chain 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:47,318,477...47,348,767
Ensembl chr16:47,319,138...47,348,839 		JBrowse link
G DNAI4 dynein axonemal intermediate chain 4 located_in ISO (MGI:6436377|PMID:30060180) UniProt PMID:30060180 MGI:6436377 NCBI chr20:66,189,698...66,295,628
Ensembl chr20:66,189,723...66,294,478 		JBrowse link
G DNAI7 dynein axonemal intermediate chain 7 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:24,871,767...24,953,586
Ensembl chr11:24,875,416...24,953,375 		JBrowse link
G DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:65,211,142...65,233,948
Ensembl chr 1:65,217,224...65,235,556 		JBrowse link
G DNALI1 dynein axonemal light intermediate chain 1 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:95,301,879...95,312,885
Ensembl chr20:95,299,311...95,312,651 		JBrowse link
G DRC1 dynein regulatory complex subunit 1 located_in IEA TreeGrafter GO_REF:0000118 Ensembl chr14:81,199,498...81,244,663 JBrowse link
G DRC3 dynein regulatory complex subunit 3 located_in ISO (PMID:26387594) MGI PMID:26387594 NCBI chr16:17,009,632...17,056,744
Ensembl chr16:17,010,290...17,056,733 		JBrowse link
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:94,484,090...94,849,960
Ensembl chr 1:94,484,512...94,849,581 		JBrowse link
G DYNC2I2 dynein 2 intermediate chain 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:9,470,588...9,503,754
Ensembl chr12:9,479,403...9,503,671 		JBrowse link
G DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:63,441,948...63,481,460
Ensembl chr14:63,440,155...63,481,479 		JBrowse link
G DYNLT2B dynein light chain Tctex-type 2B located_in IEA Ensembl GO_REF:0000107 NCBI chr15:90,867,250...90,902,064
Ensembl chr15:90,867,322...90,902,667 		JBrowse link
G DYNLT4 dynein light chain Tctex-type 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:87,988,230...87,989,578
Ensembl chr20:87,988,898...87,989,563 		JBrowse link
G DZIP1L DAZ interacting zinc finger protein 1 like located_in ISO (PMID:29487109) MGI PMID:29487109 NCBI chr15:52,425,472...52,480,484
Ensembl chr15:52,428,570...52,480,887 		JBrowse link
G EFHC1 EF-hand domain containing 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:20,011,684...20,083,639
Ensembl chr17:20,011,530...20,083,592 		JBrowse link
G EFHC2 EF-hand domain containing 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:41,315,664...41,513,778
Ensembl chr  X:41,317,034...41,513,669 		JBrowse link
G GABARAP GABA type A receptor-associated protein located_in IEA Ensembl GO_REF:0000107 NCBI chr16:6,614,478...6,616,516
Ensembl chr16:6,614,688...6,616,443 		JBrowse link
G GAS8 growth arrest specific 8 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,353,493...75,370,012
Ensembl chr 5:75,354,117...75,371,796 		JBrowse link
G GLI1 GLI family zinc finger 1 located_in ISO (MGI:3692156|PMID:16254602)
(PMID:16254602)		 CACAO PMID:16254602 MGI:3692156 NCBI chr11:53,371,929...53,384,339
Ensembl chr11:53,375,558...53,385,269 		JBrowse link
G GLI2 GLI family zinc finger 2 located_in ISO (MGI:4888042|PMID:21209331)
(PMID:21209331)		 CACAO PMID:21209331 MGI:4888042 NCBI chr10:9,302,890...9,561,287
Ensembl chr10:9,304,645...9,369,115 		JBrowse link
G GLI3 GLI family zinc finger 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr21:16,386,700...16,665,648
Ensembl chr21:16,549,789...16,662,238 		JBrowse link
G GNAT3 G protein subunit alpha transducin 3 ISO RGD PMID:17021831 RGD:2302145 NCBI chr21:68,372,715...68,431,972
Ensembl chr21:68,374,992...68,431,485 		JBrowse link
G HYDIN HYDIN axonemal central pair apparatus protein located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:53,950,286...54,435,770
Ensembl chr 5:53,950,886...54,335,689 		JBrowse link
G IFT140 intraflagellar transport 140 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:1,419,432...1,523,342
Ensembl chr 5:1,415,664...1,521,843 		JBrowse link
G IFT172 intraflagellar transport 172 located_in IEA TreeGrafter GO_REF:0000118 Ensembl chr14:80,138,354...80,171,200 JBrowse link
G IFT57 intraflagellar transport 57 located_in IEA Ensembl GO_REF:0000107 NCBI chr22:72,560,168...72,629,066
Ensembl chr22:72,560,221...72,632,158 		JBrowse link
G IFT88 intraflagellar transport 88 located_in ISO (PMID:11251073), (PMID:11854326), (PMID:18066062), (PMID:20368623), (PMID:24302887) MGI PMID:11251073 PMID:11854326 PMID:18066062 PMID:20368623 PMID:24302887 NCBI chr 3:435,649...546,661
Ensembl chr 3:436,207...546,583 		JBrowse link
G INPP5E inositol polyphosphate-5-phosphatase E located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:1,763,800...1,776,139
Ensembl chr12:1,763,865...1,776,712 		JBrowse link
G KIF17 kinesin family member 17 located_in ISO (PMID:19384852) MGI PMID:19384852 NCBI chr20:111,840,611...111,889,520
Ensembl chr20:111,841,472...111,888,951 		JBrowse link
G KIF19 kinesin family member 19 located_in IEA GOC GO_REF:0000108 NCBI chr16:47,278,541...47,308,125
Ensembl chr16:47,278,546...47,307,707 		JBrowse link
G KIF3A kinesin family member 3A ISO RGD PMID:9920666 RGD:1581597 NCBI chr23:35,496,770...35,554,536
Ensembl chr23:35,514,130...35,551,472 		JBrowse link
G KIFAP3 kinesin associated protein 3 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr25:58,983,180...59,130,431
Ensembl chr25:58,983,207...59,130,074 		JBrowse link
G LCA5 lebercilin LCA5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:4,197,522...4,230,274
Ensembl chr13:4,197,371...4,248,854 		JBrowse link
G LCA5L lebercilin LCA5 like located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:83,351,507...83,395,096
Ensembl chr 2:83,350,583...83,376,491 		JBrowse link
G LOC103217787 sperm-associated antigen 16 protein located_in ISO (MGI:3844768|PMID:19305393)
(PMID:19305393)		 UniProt PMID:19305393 MGI:3844768 NCBI chr10:99,044,097...100,215,884 JBrowse link
G LOC103232074 cAMP-dependent protein kinase type I-alpha regulatory subunit-like located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:53,803,106...53,806,474 JBrowse link
G MAK male germ cell associated kinase located_in ISO (PMID:21148103) MGI PMID:21148103 NCBI chr17:61,301,634...61,376,885 JBrowse link
G MAP1LC3B microtubule associated protein 1 light chain 3 beta located_in ISO (MGI:5527012|PMID:24089209)
(PMID:24089209)		 UniProt PMID:24089209 MGI:5527012 NCBI chr 5:72,762,428...72,774,204
Ensembl chr 5:72,763,050...72,772,770 		JBrowse link
G MAP4 microtubule associated protein 4 located_in ISO (PMID:23572511) GO_Central PMID:23572511 NCBI chr22:9,239,983...9,461,438
Ensembl chr22:9,242,309...9,394,713 		JBrowse link
G MAPK15 mitogen-activated protein kinase 15 NOT|located_in ISO (PMID:29021280) UniProt PMID:29021280 NCBI chr 8:137,932,291...137,938,392
Ensembl chr 8:137,932,364...137,938,626 		JBrowse link
G MAPT microtubule associated protein tau located_in ISO (PMID:19004860) MGI PMID:19004860 NCBI chr16:59,894,400...60,020,723
Ensembl chr16:59,890,221...59,955,612 		JBrowse link
G MNS1 meiosis specific nuclear structural 1 located_in ISO (PMID:30148830)
(PMID:22396656), (PMID:37198331)
(MGI:7565919|PMID:37198331), (PMID:22396656)		 UniProt
MGI		 PMID:22396656 PMID:30148830 PMID:37198331 MGI:7565919 NCBI chr26:27,026,932...27,060,044
Ensembl chr26:27,027,827...27,059,863 		JBrowse link
G NME8 NME/NM23 family member 8 located_in IEA Ensembl GO_REF:0000107 NCBI chr21:20,617,683...20,670,346
Ensembl chr21:20,620,941...20,668,888 		JBrowse link
G ODAD1 outer dynein arm docking complex subunit 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:41,561,452...41,588,632
Ensembl chr 6:41,560,522...41,586,456 		JBrowse link
G ODAD2 outer dynein arm docking complex subunit 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:27,369,965...27,563,798
Ensembl chr 9:27,369,971...27,550,110 		JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:10,349,063...10,360,292
Ensembl chr 6:10,349,069...10,360,250 		JBrowse link
G ODAD4 outer dynein arm docking complex subunit 4 located_in ISO (PMID:27486780)
(PMID:33347437)		 GO_Central
MGI		 PMID:27486780 PMID:33347437 NCBI chr16:64,297,983...64,333,421 JBrowse link
G PIK3R4 phosphoinositide-3-kinase regulatory subunit 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr15:59,444,570...59,515,619
Ensembl chr15:59,444,616...59,515,240 		JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha located_in ISO (PMID:12475942) UniProt PMID:12475942 NCBI chr 6:12,743,752...12,759,155 JBrowse link
G PRKAR1A protein kinase cAMP-dependent type I regulatory subunit alpha located_in IEA Ensembl GO_REF:0000107 NCBI chr16:53,021,666...53,042,594
Ensembl chr16:53,023,963...53,042,493 		JBrowse link
G PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha located_in IEA Ensembl GO_REF:0000107 NCBI chr22:10,153,951...10,251,438
Ensembl chr22:10,150,378...10,251,397 		JBrowse link
G PTTG1 PTTG1 regulator of sister chromatid separation, securin is_active_in ISO (PMID:34463328) MGI PMID:34463328 NCBI chr23:62,781,184...62,787,832 JBrowse link
G RP1 RP1 axonemal microtubule associated located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:50,743,699...50,837,089
Ensembl chr 8:50,627,957...50,685,911
Ensembl chr 8:50,627,957...50,685,911 		JBrowse link
G RP1L1 RP1 like 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:8,479,768...8,499,497 JBrowse link
G RPGRIP1 RPGR interacting protein 1 located_in ISO (PMID:11104772) MGI PMID:11104772 NCBI chr29:21,769,366...21,822,346
Ensembl chr29:21,762,809...21,822,249 		JBrowse link
G RPGRIP1L RPGRIP1 like located_in ISO (PMID:17558409) MGI PMID:17558409 NCBI chr 5:39,388,632...39,487,223
Ensembl chr 5:39,387,107...39,487,092 		JBrowse link
G RSPH1 radial spoke head component 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:86,348,365...86,371,908
Ensembl chr 2:86,348,056...86,371,858 		JBrowse link
G RSPH4A radial spoke head component 4A located_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr13:57,175,100...57,192,184
Ensembl chr13:57,172,127...57,192,125 		JBrowse link
G RSPH6A radial spoke head 6 homolog A located_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 6:39,248,127...39,264,752 JBrowse link
G RSPH9 radial spoke head component 9 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:28,497,793...28,520,678
Ensembl chr17:28,495,424...28,520,518 		JBrowse link
G SEPTIN2 septin 2 located_in ISO (PMID:23572511) GO_Central PMID:23572511 NCBI chr10:127,378,393...127,421,012
Ensembl chr10:127,387,280...127,421,201 		JBrowse link
G SEPTIN7 septin 7 located_in ISO (PMID:23572511) GO_Central PMID:23572511 NCBI chr21:22,521,109...22,626,464
Ensembl chr21:22,522,127...22,626,504 		JBrowse link
G SEPTIN9 septin 9 located_in ISO (PMID:23572511) GO_Central PMID:23572511 NCBI chr16:44,211,692...44,424,242
Ensembl chr16:44,213,623...44,310,524 		JBrowse link
G SPAG6 sperm associated antigen 6 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:22,119,230...22,184,374
Ensembl chr 9:22,119,281...22,184,397 		JBrowse link
G SPATA4 spermatogenesis associated 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:122,259,054...122,273,218
Ensembl chr 7:122,259,066...122,272,691 		JBrowse link
G SPATA7 spermatogenesis associated 7 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:66,041,574...66,086,963
Ensembl chr24:66,041,568...66,088,716 		JBrowse link
G SPEF1 sperm flagellar 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:34,462,933...34,467,575
Ensembl chr 2:34,462,896...34,466,923 		JBrowse link
G SSNA1 SS nuclear autoantigen 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:999,142...1,000,877
Ensembl chr12:999,327...1,000,831 		JBrowse link
G TMEM67 transmembrane protein 67 located_in ISO RGD PMID:23516626 RGD:11535084 NCBI chr 8:88,726,783...88,818,111
Ensembl chr 8:88,726,837...88,792,049 		JBrowse link
G TOGARAM1 TOG array regulator of axonemal microtubules 1 located_in ISO (PMID:32453716) UniProt PMID:32453716 NCBI chr24:22,078,938...22,195,923
Ensembl chr24:22,078,158...22,195,917 		JBrowse link
G TRAF3IP1 TRAF3 interacting protein 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:124,348,763...124,428,522
Ensembl chr10:124,348,916...124,429,716 		JBrowse link
G TTLL10 tubulin tyrosine ligase like 10 located_in ISO (MGI:3850271|PMID:19524510)
(PMID:19524510)		 UniProt PMID:19524510 MGI:3850271 NCBI chr20:130,247,309...130,270,452 JBrowse link
G TTLL3 tubulin tyrosine ligase like 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:45,817,048...45,843,878 JBrowse link
G TTLL8 tubulin tyrosine ligase like 8 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:32,519,898...32,556,437
Ensembl chr19:32,520,001...32,555,079 		JBrowse link
G TUBB4A tubulin beta 4A class IVa located_in ISO (PMID:12475942) UniProt PMID:12475942 NCBI chr 6:6,104,265...6,111,966
Ensembl chr 6:6,094,130...6,111,762 		JBrowse link
G TULP3 TUB like protein 3 located_in ISO (PMID:19286674) MGI PMID:19286674 NCBI chr11:2,956,762...3,005,309
Ensembl chr11:2,956,895...3,006,735 		JBrowse link
G WDR11 WD repeat domain 11 located_in ISO (MGI:6116377|PMID:29263200)
(PMID:29263200)		 UniProt PMID:29263200 MGI:6116377 NCBI chr 9:113,631,153...113,687,575
Ensembl chr 9:113,631,401...113,687,574 		JBrowse link
G WDR35 WD repeat domain 35 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:87,732,034...87,801,687
Ensembl chr14:87,732,049...87,801,852 		JBrowse link
ciliary plasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYNC2I2 dynein 2 intermediate chain 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:9,470,588...9,503,754
Ensembl chr12:9,479,403...9,503,671 		JBrowse link
G NEK4 NIMA related kinase 4 ISO RGD PMID:21685204 RGD:13204813 NCBI chr22:14,083,583...14,152,775
Ensembl chr22:14,121,073...14,152,547 		JBrowse link
dendrite cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD12 abhydrolase domain containing 12, lysophospholipase located_in ISO (MGI:6094388|PMID:27307232) UniProt PMID:27307232 MGI:6094388
G ABHD13 abhydrolase domain containing 13 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:86,587,155...86,602,978
Ensembl chr 3:86,597,958...86,598,971 		JBrowse link
G ADA adenosine deaminase ISO RGD PMID:2253038 RGD:2291858 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G CAMK2A calcium/calmodulin dependent protein kinase II alpha located_in ISO PMID:1419001 BHF-UCL PMID:1419001 RGD:68238 NCBI chr23:52,829,438...52,899,428
Ensembl chr23:52,829,350...52,899,375 		JBrowse link
G CANX calnexin ISO RGD PMID:10461883 RGD:2313156 NCBI chr23:81,422,701...81,454,683
Ensembl chr23:81,422,693...81,482,332 		JBrowse link
G CDKL5 cyclin dependent kinase like 5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:16,955,540...17,101,513 JBrowse link
G DLG4 discs large MAGUK scaffold protein 4 located_in ISO PMID:1419001 BHF-UCL PMID:1419001 RGD:68238 NCBI chr16:6,562,953...6,592,247
Ensembl chr16:6,562,691...6,590,867 		JBrowse link
G FLOT2 flotillin 2 located_in IEA GOC GO_REF:0000108 NCBI chr16:22,639,403...22,658,311
Ensembl chr16:22,639,381...22,658,194 		JBrowse link
G GABARAPL1 GABA type A receptor associated protein like 1 ISO RGD PMID:16650615 RGD:4890439 NCBI chr11:10,087,582...10,099,125
Ensembl chr11:10,087,604...10,096,612 		JBrowse link
G GRIA2 glutamate ionotropic receptor AMPA type subunit 2 ISO RGD PMID:17207780 RGD:1642304 NCBI chr 7:103,808,789...103,957,947
Ensembl chr 7:103,808,797...103,953,040 		JBrowse link
G GRIK2 glutamate ionotropic receptor kainate type subunit 2 ISO RGD PMID:15844209 RGD:1642495 NCBI chr13:71,855,960...72,545,376
Ensembl chr13:71,855,794...72,325,857 		JBrowse link
G GRIK3 glutamate ionotropic receptor kainate type subunit 3 ISO RGD PMID:15844209 RGD:1642495 NCBI chr20:95,832,480...96,069,890
Ensembl chr20:95,832,864...96,063,577 		JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U located_in ISO (MGI:3530979|PMID:15312650) GOC PMID:15312650 MGI:3530979 NCBI chr25:81,879,532...81,890,684
Ensembl chr25:81,878,111...81,890,701 		JBrowse link
G HPCA hippocalcin ISO RGD PMID:8233019 RGD:9686436 NCBI chr20:99,974,952...99,983,194
Ensembl chr20:99,975,742...99,980,728 		JBrowse link
G KCNAB1 potassium voltage-gated channel subfamily A regulatory beta subunit 1 ISO RGD PMID:8756417 RGD:9743934 NCBI chr15:34,223,250...34,467,924
Ensembl chr15:34,221,890...34,468,001 		JBrowse link
G KIF17 kinesin family member 17 located_in ISO (MGI:5424048|PMID:22514311) GOC PMID:22514311 MGI:5424048 NCBI chr20:111,840,611...111,889,520
Ensembl chr20:111,841,472...111,888,951 		JBrowse link
G KIF3B kinesin family member 3B located_in IEA GOC GO_REF:0000108 NCBI chr 2:36,655,957...36,711,292
Ensembl chr 2:36,687,168...36,711,925 		JBrowse link
G KIF5A kinesin family member 5A located_in ISO (MGI:5819356|PMID:11986669) GOC PMID:11986669 MGI:5819356 NCBI chr11:53,458,795...53,493,801 JBrowse link
G KIFAP3 kinesin associated protein 3 located_in IEA GOC GO_REF:0000108 NCBI chr25:58,983,180...59,130,431
Ensembl chr25:58,983,207...59,130,074 		JBrowse link
G KLHL17 kelch like family member 17 ISO RGD PMID:12063253 RGD:625502 NCBI chr20:130,467,286...130,472,384
Ensembl chr20:130,467,261...130,471,904 		JBrowse link
G LRRK2 leucine rich repeat kinase 2 located_in ISO (PMID:21696411) BHF-UCL PMID:21696411 NCBI chr11:36,490,775...36,634,215
Ensembl chr11:36,492,011...36,634,216 		JBrowse link
G MAP2 microtubule associated protein 2 located_in ISO PMID:3517689 ARUK-UCL PMID:3517689 RGD:13514082 NCBI chr10:95,319,649...95,431,106
Ensembl chr10:95,349,157...95,431,320 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO RGD PMID:9714150 RGD:2293331 NCBI chr26:17,059,122...17,168,787
Ensembl chr26:17,060,054...17,168,782 		JBrowse link
G MAP2K4 mitogen-activated protein kinase kinase 4 ISO RGD PMID:9714150 RGD:2293331 NCBI chr16:11,366,610...11,485,411
Ensembl chr16:11,366,751...11,486,125 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 ISO RGD PMID:9714150 RGD:2293331 NCBI chr19:4,246,144...4,352,648
Ensembl chr19:4,246,122...4,353,325 		JBrowse link
G MAPK8 mitogen-activated protein kinase 8 ISO RGD PMID:9714150 RGD:2293331 NCBI chr 9:43,356,603...43,489,066
Ensembl chr 9:43,356,308...43,393,425 		JBrowse link
G OPRM1 opioid receptor mu 1 ISO RGD PMID:16194531 RGD:2316627 NCBI chr13:81,568,295...81,650,005
Ensembl chr13:81,568,732...81,625,088 		JBrowse link
G PURA purine rich element binding protein A located_in ISO (MGI:3530979|PMID:15312650) GOC PMID:15312650 MGI:3530979 NCBI chr23:42,757,963...42,767,393
Ensembl chr23:42,764,263...42,765,231 		JBrowse link
G RAB17 RAB17, member RAS oncogene family located_in IEA GOC GO_REF:0000108 NCBI chr10:123,579,771...123,603,355
Ensembl chr10:123,580,621...123,594,374 		JBrowse link
G SFPQ splicing factor proline and glutamine rich located_in ISO (MGI:3530979|PMID:15312650) GOC PMID:15312650 MGI:3530979 NCBI chr20:97,698,953...97,715,762
Ensembl chr20:97,698,411...97,711,294 		JBrowse link
G SOD1 superoxide dismutase 1 located_in ISO (PMID:17324120) UniProt PMID:17324120 NCBI chr 2:60,461,219...60,472,999 JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 located_in IEA GOC GO_REF:0000108 NCBI chr 2:14,804,750...14,879,067
Ensembl chr 2:14,804,791...14,878,838 		JBrowse link
G STAU2 staufen double-stranded RNA binding protein 2 located_in IEA GOC GO_REF:0000108 NCBI chr 8:69,025,827...69,360,760
Ensembl chr 8:69,025,436...69,322,539 		JBrowse link
G UHMK1 U2AF homology motif kinase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:1,564,205...1,594,841
Ensembl chr20:1,571,266...1,594,953 		JBrowse link
G WLS Wnt ligand secretion mediator ISO RGD PMID:22001156 RGD:7488965 NCBI chr20:64,879,594...64,987,460
Ensembl chr20:64,879,864...64,977,038 		JBrowse link
G ZC3H14 zinc finger CCCH-type containing 14 located_in IEA Ensembl GO_REF:0000107 NCBI chr24:66,200,140...66,249,343
Ensembl chr24:66,200,181...66,249,210 		JBrowse link
dendritic spine cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAIAP2 BAR/IMD domain containing adaptor protein 2 ISO RGD PMID:15673667 RGD:9684988 NCBI chr16:72,986,476...73,065,358
Ensembl chr16:72,986,490...73,067,001 		JBrowse link
distal portion of axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAH9 dynein axonemal heavy chain 9 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:10,947,254...11,316,414
Ensembl chr16:10,948,014...11,317,291 		JBrowse link
inner dynein arm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAH1 dynein axonemal heavy chain 1 part_of ISO (PMID:24360805) SYSCILIA_CCNET PMID:24360805 NCBI chr22:13,678,132...13,764,988
Ensembl chr22:13,683,487...13,764,937 		JBrowse link
G DNAH2 dynein axonemal heavy chain 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr16:7,097,581...7,220,263
Ensembl chr16:7,103,152...7,220,397 		JBrowse link
G DNAH7 dynein axonemal heavy chain 7 part_of ISO (PMID:11877439) SYSCILIA_CCNET PMID:11877439 NCBI chr10:81,272,913...81,615,943
Ensembl chr10:81,269,432...81,604,013 		JBrowse link
G DNAI3 dynein axonemal intermediate chain 3 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr20:48,214,391...48,289,037
Ensembl chr20:48,214,389...48,288,196 		JBrowse link
G DNHD1 dynein heavy chain domain 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chr 1:58,254,559...58,330,856
Ensembl chr 1:58,254,609...58,329,357 		JBrowse link
neuron projection cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNA2 cholinergic receptor nicotinic alpha 2 subunit ISO MMO:0000293, MMO:0000656 RGD PMID:19385992 RGD:152995360 NCBI chr 8:25,571,958...25,591,982
Ensembl chr 8:25,571,863...25,591,788 		JBrowse link
neuronal ribonucleoprotein granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARC activity regulated cytoskeleton associated protein located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:136,857,402...136,860,933
Ensembl chr 8:136,859,438...136,860,628 		JBrowse link
G CKAP5 cytoskeleton associated protein 5 located_in ISO (PMID:23936366) MGI PMID:23936366 NCBI chr 1:18,504,588...18,584,635
Ensembl chr 1:18,484,372...18,586,623 		JBrowse link
G EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 is_active_in ISO (PMID:30765518) UniProt PMID:30765518 NCBI chr 9:60,867,810...60,894,899
Ensembl chr 9:60,874,602...60,894,919 		JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 located_in
is_active_in		 IEA
ISO		 (PMID:30765518) Ensembl
UniProt		 PMID:30765518 GO_REF:0000107 NCBI chr  X:122,635,383...122,674,298
Ensembl chr  X:122,635,439...122,674,355 		JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 ISO RGD PMID:14523087 RGD:9685480 NCBI chr21:32,167,126...32,178,031
Ensembl chr21:32,167,337...32,176,980 		JBrowse link
G HNRNPAB heterogeneous nuclear ribonucleoprotein A/B ISO RGD PMID:21471000 RGD:9999187 NCBI chr23:79,891,942...79,903,289 JBrowse link
G HTT huntingtin ISO RGD PMID:22355657 RGD:6902916 NCBI chr27:45,493,467...45,657,690
Ensembl chr27:45,497,352...45,657,621 		JBrowse link
G KIF3C kinesin family member 3C located_in ISO PMID:17881655 MGI PMID:17881655 RGD:8553560 NCBI chr14:81,666,884...81,717,489
Ensembl chr14:81,666,793...81,717,508 		JBrowse link
G PQBP1 polyglutamine binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:46,014,664...46,020,204
Ensembl chr  X:46,015,250...46,023,988 		JBrowse link
G UHMK1 U2AF homology motif kinase 1 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:1,564,205...1,594,841
Ensembl chr20:1,571,266...1,594,953 		JBrowse link
outer dynein arm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC103 coiled-coil domain containing 103 part_of IEA InterPro GO_REF:0000002 NCBI chr16:61,502,337...61,505,872
Ensembl chr16:61,502,495...61,505,668 		JBrowse link
G CFAP70 cilia and flagella associated protein 70 part_of ISO (PMID:31621862) UniProt PMID:31621862 NCBI chr 9:57,917,170...58,019,298
Ensembl chr 9:57,930,772...58,019,372 		JBrowse link
G DNAH17 dynein axonemal heavy chain 17 part_of ISO (PMID:31178125) UniProt PMID:31178125 NCBI chr16:70,422,079...70,571,126
Ensembl chr16:70,422,632...70,568,535 		JBrowse link
G DNAH5 dynein axonemal heavy chain 5 part_of ISO (PMID:16627867)
(PMID:27353389)
(PMID:11062149), (PMID:11788826), (PMID:22499950)		 SYSCILIA_CCNET
MGI		 PMID:11062149 PMID:11788826 PMID:16627867 PMID:22499950 PMID:27353389 NCBI chr 4:13,401,980...13,718,900
Ensembl chr 4:13,401,092...13,652,755 		JBrowse link
G DNAH9 dynein axonemal heavy chain 9 part_of IEA Ensembl GO_REF:0000107 NCBI chr16:10,947,254...11,316,414
Ensembl chr16:10,948,014...11,317,291 		JBrowse link
G DNAI1 dynein axonemal intermediate chain 1 part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:46,058,280...46,155,989
Ensembl chr12:46,090,829...46,128,839 		JBrowse link
G DNAI2 dynein axonemal intermediate chain 2 part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:47,318,477...47,348,767
Ensembl chr16:47,319,138...47,348,839 		JBrowse link
G DYNC1I2 dynein cytoplasmic 1 intermediate chain 2 part_of ISO (PMID:27353389) MGI PMID:27353389 NCBI chr10:57,182,245...57,242,359
Ensembl chr10:57,182,220...57,244,510 		JBrowse link
G NME8 NME/NM23 family member 8 part_of IEA Ensembl GO_REF:0000107 NCBI chr21:20,617,683...20,670,346
Ensembl chr21:20,620,941...20,668,888 		JBrowse link
G ODAD1 outer dynein arm docking complex subunit 1 part_of ISO (PMID:23261303) UniProt PMID:23261303 NCBI chr 6:41,561,452...41,588,632
Ensembl chr 6:41,560,522...41,586,456 		JBrowse link
outer dynein arm docking complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ODAD4 outer dynein arm docking complex subunit 4 part_of ISO (PMID:27486780) GO_Central PMID:27486780 NCBI chr16:64,297,983...64,333,421 JBrowse link
proximal portion of axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAH11 dynein axonemal heavy chain 11 located_in ISO (PMID:26909801)
(PMID:26909801), (PMID:33347437)		 GO_Central
MGI		 PMID:26909801 PMID:33347437 NCBI chr21:36,350,606...36,722,018
Ensembl chr21:36,350,707...36,720,511 		JBrowse link
radial spoke term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:65,211,142...65,233,948
Ensembl chr 1:65,217,224...65,235,556 		JBrowse link
G DYDC1 DPY30 domain containing 1 part_of ISO (MGI:7407981|PMID:36417862) UniProt PMID:36417862 MGI:7407981 NCBI chr 9:51,478,484...51,539,958 JBrowse link
G IQUB IQ motif and ubiquitin domain containing part_of IEA Ensembl GO_REF:0000107 NCBI chr21:92,249,281...92,324,786
Ensembl chr21:92,246,222...92,324,722 		JBrowse link
G LOC103222901 radial spoke head 14 homolog part_of ISO (MGI:7407981|PMID:36417862)
(PMID:36417862)		 UniProt PMID:36417862 MGI:7407981 NCBI chr19:2,740,897...2,824,054
Ensembl chr19:2,741,212...2,824,031 		JBrowse link
G NME5 NME/NM23 family member 5 part_of ISO (MGI:7407981|PMID:36417862)
(PMID:36417862)		 UniProt PMID:36417862 MGI:7407981 NCBI chr23:40,785,234...40,808,391
Ensembl chr23:40,785,255...40,807,767 		JBrowse link
G ROPN1L rhophilin associated tail protein 1 like part_of ISO (MGI:7407981|PMID:36417862)
(PMID:36417862)		 UniProt PMID:36417862 MGI:7407981 NCBI chr 4:9,978,369...9,999,007
Ensembl chr 4:9,978,409...9,999,009 		JBrowse link
G RSPH1 radial spoke head component 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:86,348,365...86,371,908
Ensembl chr 2:86,348,056...86,371,858 		JBrowse link
G RSPH4A radial spoke head component 4A part_of IEA InterPro GO_REF:0000002 NCBI chr13:57,175,100...57,192,184
Ensembl chr13:57,172,127...57,192,125 		JBrowse link
G RSPH6A radial spoke head 6 homolog A part_of IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:39,248,127...39,264,752 JBrowse link
G RSPH9 radial spoke head component 9 part_of ISO (MGI:7407981|PMID:36417862)
(PMID:36417862)		 UniProt PMID:36417862 MGI:7407981 NCBI chr17:28,497,793...28,520,678
Ensembl chr17:28,495,424...28,520,518 		JBrowse link
radial spoke head term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RSPH1 radial spoke head component 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:86,348,365...86,371,908
Ensembl chr 2:86,348,056...86,371,858 		JBrowse link
G RSPH4A radial spoke head component 4A part_of ISO (MGI:7447185|PMID:34871179)
(PMID:34871179)
(PMID:26506310)		 UniProt
MGI		 PMID:26506310 PMID:34871179 MGI:7447185 NCBI chr13:57,175,100...57,192,184
Ensembl chr13:57,172,127...57,192,125 		JBrowse link
G RSPH6A radial spoke head 6 homolog A part_of IEA Ensembl GO_REF:0000107 NCBI chr 6:39,248,127...39,264,752 JBrowse link
G RSPH9 radial spoke head component 9 part_of ISO (MGI:7447185|PMID:34871179)
(PMID:34871179)		 UniProt PMID:34871179 MGI:7447185 NCBI chr17:28,497,793...28,520,678
Ensembl chr17:28,495,424...28,520,518 		JBrowse link
radial spoke head 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RSPH1 radial spoke head component 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:86,348,365...86,371,908
Ensembl chr 2:86,348,056...86,371,858 		JBrowse link
G RSPH4A radial spoke head component 4A part_of ISO (PMID:32203505), (PMID:34871179) MGI PMID:32203505 PMID:34871179 NCBI chr13:57,175,100...57,192,184
Ensembl chr13:57,172,127...57,192,125 		JBrowse link
G RSPH9 radial spoke head component 9 part_of ISO (PMID:34871179) MGI PMID:34871179 NCBI chr17:28,497,793...28,520,678
Ensembl chr17:28,495,424...28,520,518 		JBrowse link
radial spoke head 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RSPH4A radial spoke head component 4A part_of ISO (PMID:32203505) MGI PMID:32203505 NCBI chr13:57,175,100...57,192,184
Ensembl chr13:57,172,127...57,192,125 		JBrowse link
radial spoke head 3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RSPH1 radial spoke head component 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:86,348,365...86,371,908
Ensembl chr 2:86,348,056...86,371,858 		JBrowse link
G RSPH4A radial spoke head component 4A part_of ISO (PMID:32203505), (PMID:34871179) MGI PMID:32203505 PMID:34871179 NCBI chr13:57,175,100...57,192,184
Ensembl chr13:57,172,127...57,192,125 		JBrowse link
G RSPH9 radial spoke head component 9 part_of ISO (PMID:34871179) MGI PMID:34871179 NCBI chr17:28,497,793...28,520,678
Ensembl chr17:28,495,424...28,520,518 		JBrowse link
radial spoke stalk term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFAP61 cilia and flagella associated protein 61 part_of ISO (PMID:34792097) MGI PMID:34792097 NCBI chr 2:49,070,744...49,352,904
Ensembl chr 2:49,074,731...49,352,616 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 17814
    cellular anatomical structure 17714
      cytoplasm 11141
        cytoplasmic region 316
          plasma membrane bounded cell projection cytoplasm 272
            ciliary plasm + 192
            neuron projection cytoplasm + 81
Path 2
Term Annotations click to browse term
  cellular_component 17814
    cellular anatomical structure 17714
      intracellular anatomical structure 14199
        cytoplasm 11141
          cytoplasmic region 316
            plasma membrane bounded cell projection cytoplasm 272
              ciliary plasm + 192
              neuron projection cytoplasm + 81
paths to the root