IL1RN (interleukin 1 receptor antagonist) - Rat Genome Database

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Gene: IL1RN (interleukin 1 receptor antagonist) Canis lupus familiaris
Analyze
Symbol: IL1RN
Name: interleukin 1 receptor antagonist
RGD ID: 12267832
Description: ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); INVOLVED IN acute-phase response (ortholog); carboxylic acid metabolic process (ortholog); cellular response to norepinephrine stimulus (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH Abscess (ortholog); acute kidney failure (ortholog); Acute Liver Failure (ortholog); FOUND IN extracellular space (ortholog)
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: IL-1ra; IL-1RN; IL1 inhibitor; interleukin-1 receptor antagonist protein; IRAP
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11737,236,690 - 37,250,424 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1737,212,751 - 37,249,329 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1737,014,575 - 37,019,617 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01738,014,380 - 38,028,164 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1738,014,324 - 38,027,492 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11737,157,832 - 37,162,873 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01737,214,332 - 37,219,374 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01737,426,795 - 37,431,843 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 229 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
IL1RNDogAbscess severityISOIL1RN (Homo sapiens)9068941human protein in a rat modelRGDPMID:8872492 and REF_RGD_ID:8551794
IL1RNDogacute kidney failure  ISOIl1rn (Mus musculus)9068941 RGDPMID:14610321 and REF_RGD_ID:6907375
IL1RNDogacute kidney failure  ISOIL1RN (Homo sapiens)9068941associated with Asphyxia and rat model treated with human proteinRGDPMID:16259926 and REF_RGD_ID:6907369
IL1RNDogacute kidney failure  ISOIL1RN (Homo sapiens)9068941associated with SepsisRGDPMID:16763508 and REF_RGD_ID:6907360
IL1RNDogAcute Liver Failure  ISOIL1RN (Homo sapiens)9068941rat model treated with human gene-expressing stem cellsRGDPMID:22844472 and REF_RGD_ID:6909176
IL1RNDogAcute Lung Injury  ISOIl1rn (Rattus norvegicus)9068941mRNA:increased expression:lungRGDPMID:15970097 and REF_RGD_ID:4143168
IL1RNDogAcute Lung Injury  ISOIl1rn (Rattus norvegicus)9068941 RGDPMID:8613550 and REF_RGD_ID:4143193
IL1RNDogacute necrotizing pancreatitis  ISOIL1RN (Homo sapiens)9068941rat model treated with human proteinRGDPMID:7736749 and REF_RGD_ID:8551826
IL1RNDogadult respiratory distress syndrome disease_progressionISOIL1RN (Homo sapiens)9068941 RGDPMID:8686976 and REF_RGD_ID:4143191
IL1RNDogadult respiratory distress syndrome  ISOIl1rn (Rattus norvegicus)9068941 RGDPMID:22810359 and REF_RGD_ID:6909177
IL1RNDogadult respiratory distress syndrome  ISOIL1RN (Homo sapiens)9068941 RGDPMID:8810593 and REF_RGD_ID:4143190
IL1RNDogalcohol dependence  ISOIL1RN (Homo sapiens)9068941protein:increased expression:bloodRGDPMID:14634483 and REF_RGD_ID:405878079
IL1RNDogallergic conjunctivitis treatmentISOIL1RN (Homo sapiens)9068941human protein in a mouse modelRGDPMID:10549671 and REF_RGD_ID:8549802
IL1RNDogalopecia areata severityISOIL1RN (Homo sapiens)9068941DNA:repeats:intron:IVS2+914_1000dup IL1RN*2 (human)RGDPMID:8077705 and REF_RGD_ID:6909137
IL1RNDogAnorexia  ISOIl1rn (Rattus norvegicus)9068941associated with Adenocarcinoma more ...RGDPMID:9688694 and REF_RGD_ID:8551744
IL1RNDoganterior uveitis  ISOIL1RN (Homo sapiens)9068941human gene in rabbit modelRGDPMID:19693263 and REF_RGD_ID:8551704
IL1RNDoganti-basement membrane glomerulonephritis  ISOIl1rn (Rattus norvegicus)9068941 RGDPMID:20071465 and REF_RGD_ID:4145614
IL1RNDogasthma susceptibilityISOIL1RN (Homo sapiens)9068941DNA:SNPs: :rs447713 and rs3087271 (human)RGDPMID:16409203 and REF_RGD_ID:4143163
IL1RNDogasthma severityISOIL1RN (Homo sapiens)9068941protein:increased expression:plasmaRGDPMID:10843772 and REF_RGD_ID:4143225
IL1RNDogasthma  ISOIL1RN (Homo sapiens)9068941DNA more ...RGDPMID:11027520 and REF_RGD_ID:4143224
1 to 20 of 229 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
IL1RNDogChediak-Higashi syndrome  ISOIL1RN (Homo sapiens)8554872ClinVar Annotator: match by term: Autoinflammatory syndromeClinVarPMID:12837270 more ...
IL1RNDogChronic recurrent multifocal osteomyelitis 2, with periostitis and pustulosis  ISOIL1RN (Homo sapiens)8554872ClinVar Annotator: match by term: Sterile multifocal osteomyelitis with periostitis and pustulosisClinVarPMID:12837270 more ...
IL1RNDogdiabetic angiopathy  ISOIL1RN (Homo sapiens)8554872ClinVar Annotator: match by term: Microvascular complications of diabetes more ...ClinVarPMID:25741868 and PMID:28492532
IL1RNDogendometriosis  ISOIL1RN (Homo sapiens)8554872ClinVar Annotator: match by term: EndometriosisClinVar 
IL1RNDoggenetic disease  ISOIL1RN (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868 and PMID:28492532
IL1RNDoginterstitial lung disease 2  ISOIL1RN (Homo sapiens)8554872ClinVar Annotator: match by term: Interstitial lung disease 2ClinVarPMID:16199547 more ...
IL1RNDogpustular psoriasis 14  ISOIL1RN (Homo sapiens)8554872ClinVar Annotator: match by term: Generalized pustular psoriasisClinVarPMID:19494218 more ...
1 to 20 of 44 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
IL1RNDogAcute Liver Failure  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:20644519
IL1RNDogAnorexia  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:25392278
IL1RNDoganthracosis  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:20005085
IL1RNDogArsenic Poisoning  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:16835338
IL1RNDogasthma  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:9176529
IL1RNDogAtrophy  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:7637259
IL1RNDogautistic disorder  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:11803234
IL1RNDogBrain Injuries  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:25665855
IL1RNDogbrain ischemia  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:9236716
IL1RNDogBronchial Hyperreactivity  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:14754758
IL1RNDogcardiovascular system disease  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:29114965
IL1RNDogcerebrovascular disease  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:29114965
IL1RNDogColonic Neoplasms  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:18987561
IL1RNDogdiarrhea  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:20844880
IL1RNDogDrug-Related Side Effects and Adverse Reactions  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:31557154
IL1RNDogexanthem  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:16096327
IL1RNDogExtravasation of Diagnostic and Therapeutic Materials  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:7706905
IL1RNDogFever  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:16096327
IL1RNDogFibrosis  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:7637259
IL1RNDoggout  ISOIL1RN (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:18403674
1 to 20 of 44 rows


Biological Process
1 to 20 of 26 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
IL1RNDogacute-phase response involved_inISOIL1RN (Homo sapiens)9068941 PMID:9185517BHF-UCLPMID:9185517
IL1RNDogcarboxylic acid metabolic process  ISOIl1rn (Rattus norvegicus)9068941kainic acidRGDPMID:9685640 and REF_RGD_ID:7174732
IL1RNDogcellular response to norepinephrine stimulus  ISOIl1rn (Rattus norvegicus)9068941 RGDPMID:19818755 and REF_RGD_ID:8551853
IL1RNDogchronic inflammatory response to antigenic stimulus  ISOIl1rn (Rattus norvegicus)9068941 RGDPMID:15050649 and REF_RGD_ID:1626679
IL1RNDogfemale pregnancy  ISOIl1rn (Rattus norvegicus)9068941 RGDPMID:14603373 and REF_RGD_ID:1626683
IL1RNDogfever generation  ISOIl1rn (Rattus norvegicus)9068941 RGDPMID:16455768 and REF_RGD_ID:1626671
IL1RNDogimmune response involved_inIEAInterPro:IPR000975150520179 InterProGO_REF:0000002
IL1RNDoginflammatory response involved_inIEAInterPro:IPR000975150520179 InterProGO_REF:0000002
IL1RNDoginsulin secretion acts_upstream_of_or_withinIEAUniProtKB:P25085 and ensembl:ENSMUSP00000110126150520179 EnsemblGO_REF:0000107
IL1RNDoglipid metabolic process acts_upstream_of_or_withinIEAUniProtKB:P25085 and ensembl:ENSMUSP00000110126150520179 EnsemblGO_REF:0000107
IL1RNDogmemory  ISOIl1rn (Rattus norvegicus)9068941 RGDPMID:15050649 and REF_RGD_ID:1626679
IL1RNDognegative regulation of apoptotic process  ISOIl1rn (Rattus norvegicus)9068941 RGDPMID:16038625 and REF_RGD_ID:1626673
IL1RNDognegative regulation of cell migration  ISOIl1rn (Rattus norvegicus)9068941astrocytesRGDPMID:21244430 and REF_RGD_ID:7174692
IL1RNDognegative regulation of glutamate secretion  ISOIl1rn (Rattus norvegicus)9068941 RGDPMID:12667655 and REF_RGD_ID:1626684
IL1RNDognegative regulation of heterotypic cell-cell adhesion involved_inIEAUniProtKB:P18510 and ensembl:ENSP00000387173150520179 EnsemblGO_REF:0000107
IL1RNDognegative regulation of interleukin-1-mediated signaling pathway involved_inIEAUniProtKB:P18510 and ensembl:ENSP00000387173150520179 EnsemblGO_REF:0000107
IL1RNDognegative regulation of membrane potential  ISOIl1rn (Rattus norvegicus)9068941 RGDPMID:20554014 and REF_RGD_ID:7175067
IL1RNDogpositive regulation of JUN kinase activity  ISOIl1rn (Rattus norvegicus)9068941 RGDPMID:12667655 and REF_RGD_ID:1626684
IL1RNDogresponse to activity  ISOIl1rn (Rattus norvegicus)9068941 RGDPMID:22117073 and REF_RGD_ID:7242191
IL1RNDogresponse to glucocorticoid involved_inIEAUniProtKB:P18510 and ensembl:ENSP00000387173150520179 EnsemblGO_REF:0000107
1 to 20 of 26 rows

Cellular Component
1 to 10 of 10 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
IL1RNDogcentrosome located_inIEAUniProtKB:P18510 and ensembl:ENSP00000387173150520179 EnsemblGO_REF:0000107
IL1RNDogcytosol located_inIEAUniProtKB:P18510 and ensembl:ENSP00000387173150520179 EnsemblGO_REF:0000107
IL1RNDogextracellular region located_inIEAUniProtKB-SubCell:SL-0243150520179 UniProtGO_REF:0000044
IL1RNDogextracellular region located_inIEAUniProtKB:P25085 and ensembl:ENSMUSP00000110126150520179 EnsemblGO_REF:0000107
IL1RNDogextracellular region located_inIEAUniProtKB-KW:KW-0964150520179 UniProtGO_REF:0000043
IL1RNDogextracellular space  ISOIl1rn (Rattus norvegicus)9068941 RGDPMID:17138728 and REF_RGD_ID:1626670
IL1RNDogextracellular space located_inIEAUniProtKB:P18510 and ensembl:ENSP00000387173150520179 EnsemblGO_REF:0000107
IL1RNDogextracellular space located_inIEAInterPro:IPR000975 and InterPro:IPR020877150520179 InterProGO_REF:0000002
IL1RNDognucleoplasm located_inIEAUniProtKB:P18510 and ensembl:ENSP00000387173150520179 EnsemblGO_REF:0000107
IL1RNDogvesicle located_inIEAUniProtKB:P25085 and ensembl:ENSMUSP00000110126150520179 EnsemblGO_REF:0000107
1 to 10 of 10 rows

Molecular Function
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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
IL1RNDogcytokine activity enablesIEAUniRule:UR000000656150520179 UniProtGO_REF:0000104
IL1RNDogcytokine activity enablesIEAInterPro:IPR000975150520179 InterProGO_REF:0000002
IL1RNDoginterleukin-1 receptor antagonist activity enablesIEAUniProtKB:P18510 and ensembl:ENSP00000387173150520179 EnsemblGO_REF:0000107
IL1RNDoginterleukin-1 receptor binding enablesIEAUniRule:UR000000656150520179 UniProtGO_REF:0000104
IL1RNDoginterleukin-1 receptor binding enablesIEAInterPro:IPR003297150520179 InterProGO_REF:0000002
IL1RNDoginterleukin-1 receptor binding  ISOIl1rn (Rattus norvegicus)9068941 RGDPMID:1834644 and REF_RGD_ID:7174697
IL1RNDoginterleukin-1 type I receptor antagonist activity enablesIEAUniProtKB:P18510 and ensembl:ENSP00000387173150520179 EnsemblGO_REF:0000107
IL1RNDoginterleukin-1 type II receptor antagonist activity enablesIEAUniProtKB:P18510 and ensembl:ENSP00000387173150520179 EnsemblGO_REF:0000107
IL1RNDoginterleukin-1, type I receptor binding enablesIEAUniProtKB:P18510 and ensembl:ENSP00000387173150520179 EnsemblGO_REF:0000107
IL1RNDoginterleukin-1, type II receptor binding enablesIEAUniProtKB:P18510 and ensembl:ENSP00000387173150520179 EnsemblGO_REF:0000107
IL1RNDogprotein binding enablesISOUniProtKB:P147789068941 PMID:33961781 and PMID:9062194IntActPMID:33961781 and PMID:9062194
IL1RNDogprotein binding enablesISOUniProtKB:Q9NYB09068941 PMID:21044950IntActPMID:21044950
1 to 12 of 12 rows

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
IL1RNDoginterleukin-1 signaling pathway   ISOIL1RN (Homo sapiens)9068941 RGDPMID:20081871 and REF_RGD_ID:5490209

Imported Annotations - PID (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
IL1RNDoginterleukin-1 signaling pathway   ISOIL1RN (Homo sapiens)9068941 PIDPID:200089
PMID:11182158   PMID:22301074   PMID:22483380   PMID:30032202  



IL1RN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11737,236,690 - 37,250,424 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1737,212,751 - 37,249,329 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1737,014,575 - 37,019,617 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01738,014,380 - 38,028,164 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1738,014,324 - 38,027,492 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11737,157,832 - 37,162,873 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01737,214,332 - 37,219,374 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01737,426,795 - 37,431,843 (+)NCBIUU_Cfam_GSD_1.0
IL1RN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382113,099,360 - 113,134,014 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2113,099,315 - 113,134,016 (+)EnsemblGRCh38hg38GRCh38
GRCh372113,875,548 - 113,891,591 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362113,591,941 - 113,608,064 (+)NCBINCBI36Build 36hg18NCBI36
Build 342113,591,700 - 113,607,823NCBI
Celera2107,260,159 - 107,276,191 (+)NCBICelera
Cytogenetic Map2q14.1NCBI
HuRef2106,329,950 - 106,345,897 (+)NCBIHuRef
CHM1_12113,879,899 - 113,896,017 (+)NCBICHM1_1
T2T-CHM13v2.02113,544,556 - 113,560,594 (+)NCBIT2T-CHM13v2.0
Il1rn
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39224,226,872 - 24,241,503 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl224,226,865 - 24,241,506 (+)EnsemblGRCm39 Ensembl
GRCm38224,336,860 - 24,351,491 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl224,336,853 - 24,351,494 (+)EnsemblGRCm38mm10GRCm38
MGSCv37224,192,380 - 24,207,011 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36224,158,869 - 24,173,490 (+)NCBIMGSCv36mm8
Celera224,056,294 - 24,070,923 (+)NCBICelera
Cytogenetic Map2A3NCBI
cM Map216.36NCBI
Il1rn
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8327,509,836 - 27,525,738 (+)NCBIGRCr8
mRatBN7.237,111,567 - 7,127,451 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl37,111,550 - 7,127,445 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx310,225,656 - 10,231,090 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0318,811,887 - 18,817,327 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0317,001,698 - 17,007,132 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.031,449,778 - 1,468,624 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl31,452,644 - 1,468,614 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.031,445,598 - 1,461,452 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.432,607,800 - 2,613,216 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.132,607,803 - 2,611,842 (+)NCBI
Celera31,959,290 - 1,964,693 (+)NCBICelera
Cytogenetic Map3p13NCBI
Il1rn
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554701,144,810 - 1,159,471 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554701,145,022 - 1,159,413 (-)NCBIChiLan1.0ChiLan1.0
IL1RN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21215,056,807 - 15,073,265 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A15,059,572 - 15,065,747 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A88,991,646 - 89,008,013 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A114,061,182 - 114,077,048 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A114,061,182 - 114,078,839 (+)Ensemblpanpan1.1panPan2
Il1rn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629282,552,650 - 82,571,860 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367831,447,106 - 1,466,340 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367831,447,158 - 1,466,331 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IL1RN
(Sus scrofa - pig)		 No map positions available.
IL1RN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11416,136,667 - 16,152,451 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1416,146,333 - 16,151,326 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660803,528,175 - 3,543,946 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Il1rn
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474913,210,476 - 13,225,890 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474913,210,365 - 13,224,471 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in IL1RN
166 total Variants



adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 13 10



Ensembl Acc Id: ENSCAFT00000043065   ⟹   ENSCAFP00000036995
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1737,212,751 - 37,249,329 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845021303   ⟹   ENSCAFP00845016754
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1738,014,324 - 38,027,073 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845021339   ⟹   ENSCAFP00845016781
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1738,022,444 - 38,027,492 (+)Ensembl
RefSeq Acc Id: NM_001003096   ⟹   NP_001003096
RefSeq Status: VALIDATED
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11737,244,706 - 37,249,748 (+)NCBI
Dog10K_Boxer_Tasha1737,014,575 - 37,019,617 (+)NCBI
ROS_Cfam_1.01738,022,444 - 38,027,492 (+)NCBI
UMICH_Zoey_3.11737,157,832 - 37,162,873 (+)NCBI
UNSW_CanFamBas_1.01737,214,332 - 37,219,374 (+)NCBI
UU_Cfam_GSD_1.01737,426,795 - 37,431,843 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038690432   ⟹   XP_038546360
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01738,014,380 - 38,028,164 (+)NCBI
1 to 11 of 11 rows
Protein RefSeqs NP_001003096 (Get FASTA)   NCBI Sequence Viewer  
  XP_038546360 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAG36777 (Get FASTA)   NCBI Sequence Viewer  
  AAK01472 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000073905.1
  ENSCAFP00030008842.1
  ENSCAFP00040021927.1
  ENSCAFP00845016754
  ENSCAFP00845016781
  ENSCAFP00845016781.1
GenBank Protein Q9BEH0 (Get FASTA)   NCBI Sequence Viewer  
1 to 11 of 11 rows
RefSeq Acc Id: NP_001003096   ⟸   NM_001003096
- Peptide Label: precursor
- UniProtKB: Q9GKK2 (UniProtKB/Swiss-Prot),   Q9BEH0 (UniProtKB/Swiss-Prot),   A0A8C0KZM0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000036995   ⟸   ENSCAFT00000043065
RefSeq Acc Id: XP_038546360   ⟸   XM_038690432
- Peptide Label: isoform X1
- UniProtKB: A0A8I3NH74 (UniProtKB/TrEMBL),   A0A8P0NP10 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845016754   ⟸   ENSCAFT00845021303
Ensembl Acc Id: ENSCAFP00845016781   ⟸   ENSCAFT00845021339

RGD ID:13686259
Promoter ID:EPDNEW_C4327
Type:multiple initiation site
Name:IL1RN_1
Description:interleukin 1 receptor antagonist
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11737,244,638 - 37,244,698EPDNEW


1 to 34 of 34 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCAFG00000007277 Ensembl, UniProtKB/Swiss-Prot
  ENSCAFG00030005460 UniProtKB/Swiss-Prot
  ENSCAFG00040013573 UniProtKB/Swiss-Prot
  ENSCAFG00845011971 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSCAFT00000104578.1 UniProtKB/Swiss-Prot
  ENSCAFT00030010092.1 UniProtKB/Swiss-Prot
  ENSCAFT00040025225.1 UniProtKB/Swiss-Prot
  ENSCAFT00845021303 ENTREZGENE
  ENSCAFT00845021339 ENTREZGENE
  ENSCAFT00845021339.1 UniProtKB/Swiss-Prot
Gene3D-CATH 2.80.10.50 UniProtKB/Swiss-Prot
InterPro IL-1_CS UniProtKB/Swiss-Prot
  IL-1_fam UniProtKB/Swiss-Prot
  IL-1RA/IL-36 UniProtKB/Swiss-Prot
  IL1/FGF UniProtKB/Swiss-Prot
KEGG Report cfa:403660 UniProtKB/Swiss-Prot
NCBI Gene IL1RN ENTREZGENE
PANTHER PTHR10078 UniProtKB/Swiss-Prot
  PTHR10078:SF28 UniProtKB/Swiss-Prot
Pfam IL1 UniProtKB/Swiss-Prot
PRINTS INTERLEUKIN1 UniProtKB/Swiss-Prot
  INTRLEUKIN1X UniProtKB/Swiss-Prot
PROSITE INTERLEUKIN_1 UniProtKB/Swiss-Prot
SMART IL1 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF50353 UniProtKB/Swiss-Prot
UniProt A0A8C0KZM0 ENTREZGENE
  A0A8C0SIQ0_CANLF UniProtKB/TrEMBL
  A0A8C0SJX8_CANLF UniProtKB/TrEMBL
  A0A8I3NH74 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0NP10 ENTREZGENE, UniProtKB/TrEMBL
  IL1RA_CANLF UniProtKB/Swiss-Prot, ENTREZGENE
  Q9GKK2 ENTREZGENE
UniProt Secondary Q9GKK2 UniProtKB/Swiss-Prot
VGNC ID VGNC:41962 ENTREZGENE
1 to 34 of 34 rows