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ONTOLOGY REPORT - ANNOTATIONS

Term:sperm flagellum assembly
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Accession:GO:0120316 term browser browse the term
Definition:The assembly and organization of the sperm flagellum, the microtubule-based axoneme and associated structures that are part of a sperm flagellum (or cilium).


show annotations for term's descendants           Sort by:
sperm flagellum assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap4 A-kinase anchoring protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2684287 (PMID:15385410)		 Ensembl
RGD		 PMID:15385410 GO_REF:0000107 NCBI chr  X:15,435,391...15,445,684
Ensembl chr  X:15,435,410...15,445,684 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:33426789)		 Ensembl
RGD		 PMID:33426789 GO_REF:0000107 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Cabcoco1 ciliary associated calcium binding coiled-coil 1 acts_upstream_of_or_within ISO (PMID:37601242) RGD PMID:37601242 NCBI chr20:20,058,492...20,167,973
Ensembl chr20:20,058,454...20,167,725 		JBrowse link
G Ccdc146 coiled-coil domain containing 146 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:38038747)		 UniProt
RGD		 PMID:38038747 GO_REF:0000024 NCBI chr 4:13,662,766...13,811,619
Ensembl chr 4:13,662,766...13,811,608 		JBrowse link
G Ccdc159 coiled-coil domain containing 159 acts_upstream_of_or_within ISO (PMID:38236177) RGD PMID:38236177 NCBI chr 8:20,457,905...20,467,232
Ensembl chr 8:20,457,909...20,466,562 		JBrowse link
G Ccdc38 coiled-coil domain containing 38 acts_upstream_of
involved_in		 ISO MGI:7287391 (PMID:35587122)
(PMID:37709195)		 RGD PMID:35587122 PMID:37709195 NCBI chr 7:28,055,883...28,129,938
Ensembl chr 7:28,059,798...28,130,441 		JBrowse link
G Cep128 centrosomal protein 128 acts_upstream_of_or_within ISO MGI:7261352 (PMID:35296684) RGD PMID:35296684 NCBI chr 6:109,951,009...110,328,686
Ensembl chr 6:109,951,061...110,328,713 		JBrowse link
G Cfap119 cilia and flagella associated protein 119 acts_upstream_of_or_within ISO (PMID:37601242) RGD PMID:37601242 NCBI chr 1:182,197,171...182,216,936
Ensembl chr 1:182,192,947...182,202,338 		JBrowse link
G Cfap221 cilia and flagella associated protein 221 acts_upstream_of_or_within ISO MGI:2443727|MGI:3608909 (PMID:18039845), (PMID:32704025) RGD PMID:18039845 PMID:32704025 NCBI chr13:31,046,550...31,118,141
Ensembl chr13:31,046,535...31,116,899 		JBrowse link
G Cfap53 cilia and flagella associated protein 53 involved_in ISO (PMID:34124066) RGD PMID:34124066 NCBI chr18:67,884,651...67,955,873
Ensembl chr18:67,869,855...67,952,318 		JBrowse link
G Cfap54 cilia and flagella associated protein 54 acts_upstream_of_or_within ISO MGI:2443727|MGI:2684947 (PMID:32704025) RGD PMID:32704025 NCBI chr 7:27,316,498...27,601,630
Ensembl chr 7:27,316,502...27,602,144 		JBrowse link
G Cfap57 cilia and flagella associated protein 57 acts_upstream_of_or_within ISO MGI:7529021 (PMID:36752199) RGD PMID:36752199 NCBI chr 5:132,074,404...132,148,102
Ensembl chr 5:132,074,395...132,148,462 		JBrowse link
G Cfap58 cilia and flagella associated protein 58 involved_in ISO (PMID:31904090) RGD PMID:31904090 NCBI chr 1:246,802,691...246,911,363
Ensembl chr 1:246,802,665...246,911,374 		JBrowse link
G Cfap61 cilia and flagella associated protein 61 involved_in
acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:35174165)
MGI:6864090 (PMID:34792097)
MGI:7444390|MGI:7448443 (PMID:35387802), (PMID:36659204)		 RGD PMID:34792097 PMID:35174165 PMID:35387802 PMID:36659204 NCBI chr 3:133,354,400...133,633,310
Ensembl chr 3:133,354,197...133,633,320 		JBrowse link
G Cfap70 cilia and flagella associated protein 70 acts_upstream_of_or_within ISO (PMID:37352829) RGD PMID:37352829 NCBI chr15:3,852,381...3,918,036
Ensembl chr15:3,852,509...3,918,014 		JBrowse link
G Dnali1 dynein, axonemal, light intermediate chain 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:36792588)		 UniProt
RGD		 PMID:36792588 GO_REF:0000024 NCBI chr 5:137,318,475...137,327,313
Ensembl chr 5:137,318,477...137,327,336 		JBrowse link
G Dnhd1 dynein heavy chain domain 1 involved_in ISO (PMID:34932939) RGD PMID:34932939 NCBI chr 1:159,990,785...160,077,990
Ensembl chr 1:159,990,438...160,074,858 		JBrowse link
G Drc1 dynein regulatory complex subunit 1 acts_upstream_of_or_within ISO (PMID:34169321) RGD PMID:34169321 NCBI chr 6:26,025,004...26,059,438
Ensembl chr 6:26,025,005...26,059,414 		JBrowse link
G Dzip1 DAZ interacting zinc finger protein 1 involved_in ISO (PMID:32051257) RGD PMID:32051257 NCBI chr15:95,956,329...96,009,994
Ensembl chr15:95,956,398...96,010,066 		JBrowse link
G Ift81 intraflagellar transport 81 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:32233951)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:32233951 GO_REF:0000024 GO_REF:0000107 NCBI chr12:33,957,744...34,037,164
Ensembl chr12:33,957,806...34,037,057 		JBrowse link
G Pdcl2 phosducin-like 2 acts_upstream_of_or_within ISO MGI:7546801 (PMID:36278277) RGD PMID:36278277 NCBI chr14:31,874,563...31,895,265
Ensembl chr14:31,874,578...31,895,272 		JBrowse link
G Pfn4 profilin family, member 4 involved_in ISS
ISO		 GO_REF:0000024
(PMID:35950913)		 UniProt
RGD		 PMID:35950913 GO_REF:0000024 NCBI chr 6:27,786,619...27,796,710
Ensembl chr 6:27,786,619...27,796,710 		JBrowse link
G Poc1b POC1 centriolar protein B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:30298696), (PMID:37070736)
GO_REF:0000107		 RGD
Ensembl		 PMID:30298696 PMID:37070736 GO_REF:0000107 NCBI chr 7:33,924,112...34,025,908
Ensembl chr 7:33,924,189...34,025,903 		JBrowse link
G Rsph6a radial spoke head 6 homolog A involved_in ISO (PMID:30185526) RGD PMID:30185526 NCBI chr 1:78,700,801...78,720,444
Ensembl chr 1:78,700,814...78,720,431 		JBrowse link
G Spef2 sperm flagellar 2 acts_upstream_of_or_within ISO MGI:1922208 (PMID:32704025) RGD PMID:32704025 NCBI chr 2:58,512,489...58,694,718
Ensembl chr 2:58,512,489...58,694,664 		JBrowse link
G Yif1b Yip1 interacting factor homolog B, membrane trafficking protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:33103737)		 UniProt
RGD		 PMID:33103737 GO_REF:0000024 NCBI chr 1:84,539,673...84,549,906
Ensembl chr 1:84,539,722...84,549,904 		JBrowse link
sperm axoneme assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Armc2 armadillo repeat containing 2 involved_in ISO
IBA		 (PMID:30686508)
GO_REF:0000033		 RGD
GO_Central		 PMID:30686508 GO_REF:0000033 NCBI chr20:45,395,859...45,501,808
Ensembl chr20:45,394,127...45,504,819 		JBrowse link
G Bbof1 basal body orientation factor 1 involved_in ISO (PMID:37198331) RGD PMID:37198331 NCBI chr 6:104,055,246...104,081,036
Ensembl chr 6:104,055,241...104,082,071 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (PMID:15539463) RGD PMID:15539463 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993 		JBrowse link
G Ccdc146 coiled-coil domain containing 146 involved_in IEA
ISS		 GO_REF:0000107
GO_REF:0000024		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:13,662,766...13,811,619
Ensembl chr 4:13,662,766...13,811,608 		JBrowse link
G Cep131 centrosomal protein 131 acts_upstream_of_or_within ISO MGI:3870375 (PMID:24415959) RGD PMID:24415959 NCBI chr10:105,346,015...105,370,380
Ensembl chr10:105,346,015...105,370,380 		JBrowse link
G Cfap157 cilia and flagella associated protein 157 involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:27965440)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:27965440 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:16,066,521...16,073,504
Ensembl chr 3:16,066,521...16,073,495 		JBrowse link
G Cfap206 cilia and flagella associated protein 206 involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:32376681)
GO_REF:0000033
GO_REF:0000107		 UniProt
RGD
GO_Central
Ensembl		 PMID:32376681 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:49,254,399...49,299,145
Ensembl chr 5:49,254,408...49,299,090 		JBrowse link
G Cfap43 cilia and flagella associated protein 43 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:29449551)
(PMID:28552195), (PMID:29449551)
MGI:6140013|MGI:6431400 (PMID:29522859), (PMID:31884020)
GO_REF:0000033		 RGD
GO_Central		 PMID:28552195 PMID:29449551 PMID:29522859 PMID:31884020 GO_REF:0000033 NCBI chr 1:246,625,259...246,712,438
Ensembl chr 1:246,625,262...246,712,443 		JBrowse link
G Cfap44 cilia and flagella associated protein 44 involved_in
acts_upstream_of_or_within		 ISO (PMID:29449551)
(PMID:28552195), (PMID:29449551)
MGI:6140014 (PMID:29522859)		 RGD PMID:28552195 PMID:29449551 PMID:29522859 NCBI chr11:56,199,772...56,283,964
Ensembl chr11:56,201,049...56,283,986 		JBrowse link
G Cfap47 cilia and flagella associated protein 47 involved_in ISO (PMID:33472045) RGD PMID:33472045 NCBI chr  X:43,264,687...43,616,607
Ensembl chr  X:43,263,490...43,616,852 		JBrowse link
G Cfap58 cilia and flagella associated protein 58 involved_in
acts_upstream_of_or_within		 ISO (PMID:32791035)
MGI:6477396 (PMID:32791035)		 RGD PMID:32791035 NCBI chr 1:246,802,691...246,911,363
Ensembl chr 1:246,802,665...246,911,374 		JBrowse link
G Cfap65 cilia and flagella associated protein 65 involved_in IBA
ISO		 GO_REF:0000033
(PMID:31571197)		 GO_Central
RGD		 PMID:31571197 GO_REF:0000033 NCBI chr 9:76,459,211...76,494,199
Ensembl chr 9:76,459,211...76,494,128 		JBrowse link
G Cfap69 cilia and flagella associated protein 69 acts_upstream_of_or_within ISO (PMID:30415212)
MGI:6431857 (PMID:30415212)		 RGD PMID:30415212 NCBI chr 4:28,379,604...28,452,562
Ensembl chr 4:28,375,996...28,450,698 		JBrowse link
G Cfap97d1 CFAP97 domain containing 1 involved_in IBA
ISO		 GO_REF:0000033
(PMID:32785227)		 GO_Central
RGD		 PMID:32785227 GO_REF:0000033 NCBI chr10:86,933,585...86,944,566
Ensembl chr10:86,933,808...86,938,244 		JBrowse link
G Dnah1 dynein, axonemal, heavy chain 1 involved_in ISO
ISS		 (PMID:24360805)
GO_REF:0000024		 RGD
UniProt		 PMID:24360805 GO_REF:0000024 NCBI chr16:6,455,514...6,517,103
Ensembl chr16:6,456,002...6,518,350 		JBrowse link
G Drc7 dynein regulatory complex subunit 7 involved_in ISO (PMID:31961863) RGD PMID:31961863 NCBI chr19:9,943,452...9,961,266
Ensembl chr19:9,943,456...9,961,163 		JBrowse link
G Fsip2 fibrous sheath-interacting protein 2 acts_upstream_of_or_within_positive_effect ISO (PMID:30137358), (PMID:30745215) RGD PMID:30137358 PMID:30745215 NCBI chr 3:67,962,345...68,032,866
Ensembl chr 3:67,962,360...68,032,868 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2157527 (PMID:21337470) RGD PMID:21337470 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Iqcg IQ motif containing G involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:24849454)
GO_REF:0000033
GO_REF:0000107		 UniProt
RGD
GO_Central
Ensembl		 PMID:24849454 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr11:67,730,117...67,771,170
Ensembl chr11:67,730,247...67,771,168 		JBrowse link
G Meig1 meiosis/spermiogenesis associated 1 acts_upstream_of_or_within ISO MGI:3843498|MGI:4367077 (PMID:23258628) RGD PMID:23258628 NCBI chr17:74,810,791...74,828,433
Ensembl chr17:74,814,632...74,828,433 		JBrowse link
G Mns1 meiosis-specific nuclear structural 1 involved_in ISO (PMID:22396656) RGD PMID:22396656 NCBI chr 8:73,148,877...73,169,570
Ensembl chr 8:73,148,877...73,176,925 		JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:2153143 (PMID:11585928) RGD PMID:11585928 NCBI chr 1:246,066,830...246,152,890
Ensembl chr 1:246,067,100...246,152,903 		JBrowse link
G Pdcl2 phosducin-like 2 acts_upstream_of_or_within ISO MGI:7546801 (PMID:36278277) RGD PMID:36278277 NCBI chr14:31,874,563...31,895,265
Ensembl chr14:31,874,578...31,895,272 		JBrowse link
G Pla2g3 phospholipase A2, group III acts_upstream_of_or_within ISO MGI:4461174 (PMID:20424323) RGD PMID:20424323 NCBI chr14:78,367,625...78,373,913
Ensembl chr14:78,368,105...78,373,913 		JBrowse link
G Spag16 sperm associated antigen 16 acts_upstream_of_or_within ISO MGI:3606977 (PMID:15328412) RGD PMID:15328412 NCBI chr 9:71,333,005...72,252,772
Ensembl chr 9:71,332,992...72,252,708 		JBrowse link
G Spag6 sperm associated antigen 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:81,352,372...81,401,504
Ensembl chr17:81,349,084...81,401,501 		JBrowse link
G Spag6l sperm associated antigen 6-like involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2662475 (PMID:12391165)		 GO_Central
RGD		 PMID:12391165 GO_REF:0000033 NCBI chr11:84,173,628...84,269,374
Ensembl chr11:84,173,526...84,269,364 		JBrowse link
G Spef2 sperm flagellar 2 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:31048344), (PMID:31151990)
GO_REF:0000107
GO_REF:0000033
MGI:5295267 (PMID:21715716)		 UniProt
RGD
Ensembl
GO_Central		 PMID:21715716 PMID:31048344 PMID:31151990 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:58,512,489...58,694,718
Ensembl chr 2:58,512,489...58,694,664 		JBrowse link
G Tbc1d21 TBC1 domain family, member 21 involved_in ISO (PMID:32976492) RGD PMID:32976492 NCBI chr 8:58,761,562...58,773,711
Ensembl chr 8:58,761,563...58,773,711 		JBrowse link
G Tpgs1 tubulin polyglutamylase complex subunit 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:2388468 (PMID:12242242)
GO_REF:0000033		 RGD
GO_Central		 PMID:12242242 GO_REF:0000033 NCBI chr 7:10,029,842...10,035,764
Ensembl chr 7:10,029,854...10,035,764 		JBrowse link
G Ttc12 tetratricopeptide repeat domain 12 involved_in ISO
IBA		 (PMID:31978331)
GO_REF:0000033		 RGD
GO_Central		 PMID:31978331 GO_REF:0000033 NCBI chr 8:49,799,916...49,847,940
Ensembl chr 8:49,799,920...49,847,087 		JBrowse link
G Ttll1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:4297933|MGI:4461777 (PMID:20442420), (PMID:20498047)
GO_REF:0000033		 RGD
GO_Central		 PMID:20442420 PMID:20498047 GO_REF:0000033 NCBI chr 7:114,619,509...114,648,850
Ensembl chr 7:114,619,508...114,648,761 		JBrowse link
G Ttll5 tubulin tyrosine ligase like 5 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:23558686)
GO_REF:0000033		 RGD
GO_Central		 PMID:23558686 GO_REF:0000033 NCBI chr 6:105,483,091...105,700,920
Ensembl chr 6:105,483,191...105,700,934 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:2183933 (PMID:12672659) RGD PMID:12672659 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
G Zmynd12 zinc finger, MYND-type containing 12 involved_in ISO (PMID:37934199) RGD PMID:37934199 NCBI chr 5:133,026,917...133,059,985
Ensembl chr 5:133,027,009...133,059,995 		JBrowse link
sperm mitochondrial sheath assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Armc12 armadillo repeat containing 12 involved_in ISO (PMID:35534203)
(PMID:33536340), (PMID:35534203)		 RGD PMID:33536340 PMID:35534203 NCBI chr20:6,587,859...6,598,355
Ensembl chr20:6,587,859...6,598,352 		JBrowse link
G Cfap58 cilia and flagella associated protein 58 involved_in ISO (PMID:32791035) RGD PMID:32791035 NCBI chr 1:246,802,691...246,911,363
Ensembl chr 1:246,802,665...246,911,374 		JBrowse link
G Gk2 glycerol kinase 2 involved_in ISO (PMID:28852571) RGD PMID:28852571 NCBI chr14:12,107,071...12,108,923
Ensembl chr14:12,107,020...12,128,473 		JBrowse link
G Klc3 kinesin light chain 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22561200)		 UniProt
RGD		 PMID:22561200 GO_REF:0000024 NCBI chr 1:79,045,842...79,055,809
Ensembl chr 1:79,045,844...79,055,416 		JBrowse link
G Misfa mitochondrial sheath formation associated involved_in ISO (PMID:35228556) RGD PMID:35228556 NCBI chr 1:97,522,641...97,528,961
Ensembl chr 1:97,524,328...97,529,198 		JBrowse link
G Tbc1d21 TBC1 domain family, member 21 involved_in ISO (PMID:33536340) RGD PMID:33536340 NCBI chr 8:58,761,562...58,773,711
Ensembl chr 8:58,761,563...58,773,711 		JBrowse link
G Vdac3 voltage-dependent anion channel 3 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:35228556)		 UniProt
Ensembl
RGD		 PMID:35228556 GO_REF:0000024 GO_REF:0000107 NCBI chr16:69,434,982...69,451,473
Ensembl chr16:69,435,005...69,451,471 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20069
    reproductive process 1917
      developmental process involved in reproduction 1252
        sperm flagellum assembly 62
          sperm axoneme assembly 35
          sperm mitochondrial sheath assembly 7
Path 2
Term Annotations click to browse term
  biological_process 20069
    cellular process 19150
      cellular component organization or biogenesis 7176
        cellular component organization 6922
          cell projection organization 1877
            cell projection assembly 668
              plasma membrane bounded cell projection assembly 654
                cilium assembly 439
                  motile cilium assembly 94
                    sperm flagellum assembly 62
                      sperm axoneme assembly 35
                      sperm mitochondrial sheath assembly 7
paths to the root