Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ccdc38 (coiled-coil domain containing 38) Rattus norvegicus
Analyze
Symbol: Ccdc38
Name: coiled-coil domain containing 38
Description: Predicted to localize to the centrosome. Orthologous to human CCDC38 (coiled-coil domain containing 38); INTERACTS WITH bisphenol A; endosulfan; 4,4'-diaminodiphenylmethane (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: coiled-coil domain-containing protein 38; LOC500823; RGD1564046; similar to RIKEN cDNA 4933417K05 gene
Orthologs:
Homo sapiens (human) : CCDC38 (coiled-coil domain containing 38)  HGNC  Alliance
Mus musculus (house mouse) : Ccdc38 (coiled-coil domain containing 38)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ccdc38 (coiled-coil domain containing 38)
Pan paniscus (bonobo/pygmy chimpanzee) : CCDC38 (coiled-coil domain containing 38)
Canis lupus familiaris (dog) : CCDC38 (coiled-coil domain containing 38)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ccdc38 (coiled-coil domain containing 38)
Sus scrofa (pig) : CCDC38 (coiled-coil domain containing 38)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0734,402,861 - 34,477,750 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0734,471,944 - 34,543,214 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4730,601,969 - 30,643,967 (+)NCBIRGSC3.4rn4RGSC3.4
Celera725,155,317 - 25,228,545 (+)NCBICelera
Cytogenetic Map7q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ccdc38
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1564046
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.