Symbol:
Cfap69
Name:
cilia and flagella associated protein 69
RGD ID:
6496360
Description:
Predicted to be involved in several processes, including positive regulation of fertilization; positive regulation of flagellated sperm motility; and response to odorant. Predicted to act upstream of or within sperm axoneme assembly. Predicted to be located in cytoplasm. Predicted to be active in non-motile cilium and sperm midpiece. Human ortholog(s) of this gene implicated in spermatogenic failure 24. Orthologous to human CFAP69 (cilia and flagella associated protein 69); INTERACTS WITH bisphenol A; endosulfan; gentamycin.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
cilia- and flagella-associated protein 69; hypothetical protein LOC296824; hypothetical protein LOC679609; hypothetical protein LOC679610; LOC100910867; LOC679610; MGC72627; similar to RIKEN cDNA A330021E22; uncharacterized LOC100910867; uncharacterized protein LOC296824
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 4 29,334,624 - 29,405,513 (+) NCBI GRCr8 mRatBN7.2 4 28,379,604 - 28,452,562 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 4 28,375,996 - 28,450,698 (+) Ensembl mRatBN7.2 Ensembl Rnor_6.0 4 25,538,513 - 25,611,470 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 4 25,538,497 - 25,609,652 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 4 25,445,683 - 25,518,638 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 4 25,065,221 - 25,136,471 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 4 23,824,221 - 23,897,166 (+) NCBI Celera Cytogenetic Map 4 q13 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Cfap69 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 4 29,334,624 - 29,405,513 (+) NCBI GRCr8 mRatBN7.2 4 28,379,604 - 28,452,562 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 4 28,375,996 - 28,450,698 (+) Ensembl mRatBN7.2 Ensembl Rnor_6.0 4 25,538,513 - 25,611,470 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 4 25,538,497 - 25,609,652 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 4 25,445,683 - 25,518,638 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 4 25,065,221 - 25,136,471 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 4 23,824,221 - 23,897,166 (+) NCBI Celera Cytogenetic Map 4 q13 NCBI
CFAP69 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 7 90,245,174 - 90,323,723 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 7 90,245,174 - 90,311,063 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 7 89,874,488 - 89,940,377 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 7 89,712,461 - 89,777,624 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 7 84,578,592 - 84,644,463 (+) NCBI Celera Cytogenetic Map 7 q21.13 NCBI HuRef 7 84,484,583 - 84,549,528 (+) NCBI HuRef CHM1_1 7 89,804,453 - 89,870,457 (+) NCBI CHM1_1 T2T-CHM13v2.0 7 91,493,482 - 91,569,216 (+) NCBI T2T-CHM13v2.0 CRA_TCAGchr7v2 7 89,205,264 - 89,271,137 (+) NCBI
Cfap69 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 5,629,284 - 5,714,232 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 5 5,629,278 - 5,714,239 (-) Ensembl GRCm39 Ensembl GRCm38 5 5,579,278 - 5,664,232 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 5,579,278 - 5,664,239 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 5 5,580,982 - 5,664,232 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 5 5,586,988 - 5,670,238 (-) NCBI MGSCv36 mm8 Celera 5 5,527,663 - 5,605,661 (-) NCBI Celera Cytogenetic Map 5 A1 NCBI cM Map 5 3.07 NCBI
Cfap69 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955432 7,501,642 - 7,571,373 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955432 7,501,908 - 7,569,799 (+) NCBI ChiLan1.0 ChiLan1.0
CFAP69 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 6 108,140,930 - 108,246,399 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 7 156,406,063 - 156,511,038 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 7 82,254,266 - 82,353,873 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 7 95,856,393 - 95,936,535 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 7 95,856,393 - 95,922,012 (+) Ensembl panpan1.1 panPan2
CFAP69 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 14 16,154,334 - 16,209,776 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 14 16,154,562 - 16,209,858 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 14 15,724,650 - 15,780,123 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 14 15,960,297 - 16,015,368 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 14 15,960,530 - 16,015,450 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 14 16,120,881 - 16,175,655 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 14 15,839,436 - 15,894,879 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 14 16,125,476 - 16,180,557 (+) NCBI UU_Cfam_GSD_1.0
Cfap69 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405118 29,596,409 - 29,674,545 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936621 3,703,600 - 3,772,019 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936621 3,704,718 - 3,772,298 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
CFAP69 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 9 70,373,527 - 70,430,378 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 9 70,373,422 - 70,430,383 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 9 76,943,275 - 76,989,743 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
CFAP69 (Chlorocebus sabaeus - green monkey)
Cfap69 (Heterocephalus glaber - naked mole-rat)
.
Predicted Target Of
Count of predictions: 168 Count of miRNA genes: 49 Interacting mature miRNAs: 50 Transcripts: ENSRNOT00000008517, ENSRNOT00000009264, ENSRNOT00000068355 Prediction methods: Microtar, Miranda, Rnahybrid Result types: miRGate_prediction
2302371 Stl22 Serum triglyceride level QTL 22 5.15 blood triglyceride amount (VT:0002644) serum triglyceride level (CMO:0000360) 4 5218294 57114705 Rat 2303585 Bw86 Body weight QTL 86 4 body mass (VT:0001259) body weight (CMO:0000012) 4 14678065 59678065 Rat 8552903 Pigfal2 Plasma insulin-like growth factor 1 level QTL 2 7.3 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 4 1 31934116 Rat 9590100 Sffal4 Serum free fatty acids level QTL 4 7.36 0.05 blood free fatty acid amount (VT:0001553) plasma free fatty acids level (CMO:0000546) 4 1 31934116 Rat 8552906 Pigfal3 Plasma insulin-like growth factor 1 level QTL 3 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 4 10084089 55084089 Rat 1357341 Gluco5 Glucose level QTL 5 6.4 adipocyte free fatty acid secretion trait (VT:0010465) absolute change in adipocyte free fatty acid secretion per unit volume (CMO:0001446) 4 1 33250345 Rat 10755501 Bp390 Blood pressure QTL 390 2.5 arterial blood pressure trait (VT:2000000) diastolic blood pressure (CMO:0000005) 4 26775591 168368347 Rat 1357343 Gluco4 Glucose level QTL 4 0.00002 adipocyte glucose uptake trait (VT:0004185) adipocyte maximal glucose uptake to basal glucose uptake ratio (CMO:0000874) 4 1 33250345 Rat 6478766 Anxrr47 Anxiety related response QTL 47 0.09637 locomotor behavior trait (VT:0001392) number of entries into a discrete space in an experimental apparatus (CMO:0000960) 4 10084089 55084089 Rat 70222 Eae2 Experimental allergic encephalomyelitis QTL 2 4.3 nervous system integrity trait (VT:0010566) experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046) 4 21333343 39505420 Rat 631642 Stl2 Serum triglyceride level QTL 2 3.3 blood triglyceride amount (VT:0002644) serum triglyceride level (CMO:0000360) 4 5219178 56647776 Rat 6478769 Anxrr48 Anxiety related response QTL 48 0.02514 locomotor behavior trait (VT:0001392) amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) 4 10084089 55084089 Rat 631261 Tcas3 Tongue tumor susceptibility QTL 3 6.88 tongue integrity trait (VT:0010553) number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950) 4 10814170 91360527 Rat 61333 Gluco16 Glucose level QTL 16 4.3 0.00001 adipocyte glucose uptake trait (VT:0004185) absolute change in adipocyte glucose uptake (CMO:0000873) 4 1 30372989 Rat 634323 Hc2 Hypercalciuria QTL 2 2.15 urine calcium amount (VT:0002985) urine calcium excretion rate (CMO:0000763) 4 210796 45210796 Rat 2313401 Anxrr27 Anxiety related response QTL 27 aggression-related behavior trait (VT:0015014) tameness/aggressiveness composite score (CMO:0002136) 4 17933508 62933508 Rat 631209 Bw2 Body weight QTL2 4.2 retroperitoneal fat pad mass (VT:0010430) retroperitoneal fat pad weight to body weight ratio (CMO:0000635) 4 9940885 44463908 Rat 8552803 Bw144 Body weight QTL 144 16 body mass (VT:0001259) change in body weight to body weight ratio (CMO:0002216) 4 22710685 34430484 Rat 6909128 Pancm4 Pancreatic morphology QTL 4 11.35 pancreas mass (VT:0010144) pancreas wet weight (CMO:0000626) 4 26907285 75585128 Rat 8694374 Bw155 Body weight QTL 155 3.39 0.001 body lean mass (VT:0010483) lean tissue morphological measurement (CMO:0002184) 4 10084089 55084089 Rat 2303168 Bp330 Blood pressure QTL 330 4.25 0.017 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 4 5214602 146446691 Rat 9589046 Scfw2 Subcutaneous fat weight QTL 2 5.54 0.001 subcutaneous adipose mass (VT:1000472) abdominal subcutaneous fat pad weight (CMO:0002069) 4 1 31934116 Rat 61412 Pia2 Pristane induced arthritis QTL 2 3.9 joint integrity trait (VT:0010548) post-insult time to onset of experimental arthritis (CMO:0001450) 4 21333343 62278020 Rat 6478724 Anxrr35 Anxiety related response QTL 35 0.00449 defecation behavior trait (VT:0010462) defecation measurement (CMO:0000997) 4 10084089 55084089 Rat 61415 Eae11 Experimental allergic encephalomyelitis QTL 11 2.9 nervous system integrity trait (VT:0010566) post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422) 4 1 39505420 Rat 1641905 Colcr1 Colorectal carcinoma resistance QTL 1 4.3 0.0003 intestine integrity trait (VT:0010554) benign colorectal tumor surface area measurement (CMO:0001799) 4 1 29494328 Rat 619616 Bp79 Blood pressure QTL 79 0.0292 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 4 5214602 78882945 Rat 7387227 Uae40 Urinary albumin excretion QTL 40 2.9 0.0052 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 4 17946999 62946999 Rat 6909122 Insul22 Insulin level QTL 22 4.63 blood insulin amount (VT:0001560) plasma insulin level (CMO:0000342) 4 26907285 75585128 Rat 1358201 Gluco12 Glucose level QTL12 1.6 adipocyte glucose uptake trait (VT:0004185) adipocyte maximal glucose uptake (CMO:0000870) 4 5218392 29593287 Rat 738021 Hcar13 Hepatocarcinoma resistance QTL 13 4.3 liver integrity trait (VT:0010547) liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464) 4 1 32584199 Rat 1358203 Stl19 Serum triglyceride level QTL 19 2.8 0.002 blood triglyceride amount (VT:0002644) serum triglyceride level (CMO:0000360) 4 5218294 65958103 Rat 9590304 Scort17 Serum corticosterone level QTL 17 4.96 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 4 10084089 55084089 Rat 9589097 Slep11 Serum leptin concentration QTL 11 5.09 0.001 blood leptin amount (VT:0005667) plasma leptin level (CMO:0000781) 4 1 31934116 Rat 2316958 Gluco58 Glucose level QTL 58 10 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 4 11320076 180699135 Rat 1354665 Stl10 Serum triglyceride level QTL 10 3.57 blood triglyceride amount (VT:0002644) serum triglyceride level (CMO:0000360) 4 21333343 44463908 Rat 1300141 Bp178 Blood pressure QTL 178 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 4 10024901 39524530 Rat
RH132406
Rat Assembly Chr Position (strand) Source JBrowse GRCr8 4 29,404,684 - 29,405,429 (+) Marker Load Pipeline mRatBN7.2 4 28,449,858 - 28,450,603 (+) MAPPER mRatBN7.2 Rnor_6.0 4 25,608,767 - 25,609,511 NCBI Rnor6.0 Rnor_5.0 4 25,515,935 - 25,516,679 UniSTS Rnor5.0 RGSC_v3.4 4 25,135,480 - 25,136,224 UniSTS RGSC3.4 Celera 4 23,894,463 - 23,895,207 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000009264 ⟹ ENSRNOP00000009264
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 4 28,379,609 - 28,450,698 (+) Ensembl Rnor_6.0 Ensembl 4 25,538,497 - 25,609,652 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000112626 ⟹ ENSRNOP00000093632
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 4 28,375,996 - 28,450,698 (+) Ensembl
RefSeq Acc Id:
XM_003749688 ⟹ XP_003749736
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 4 29,334,624 - 29,405,513 (+) NCBI mRatBN7.2 4 28,379,604 - 28,452,562 (+) NCBI Rnor_6.0 4 25,538,513 - 25,611,470 (+) NCBI Rnor_5.0 4 25,445,683 - 25,518,638 (+) NCBI
Sequence:
GTGTTAGCAACTGGAGCGCGCTGGGTGCCTTGGTCATTCTGGGGACAGTAACAGCTGTTGGATATCCGCTATGTTGCTGTGGCGGGTGTCACGACCGGACTTTCAGGGTCTTTCTCCTCCCTAGCTCA GATTGCGCAGCGTGTTTTCTCCCAGGGCTCGTGGGCTGCGGACGCACCTAGGACCCCAGGCTCCCACCCCGAGCCATGTCCACCGCGGAGGCCTCTGCCGTGGCGGCCGACGCCGCCGAGGTGGGCGG CAGGACGAAGACCGGCAGTCCCCGCACAATCCCGGTGTTTGGGGTGGCGATCCCGGATGGGGAGATGCAGGATATTTTCAAGCCTATGGACCTTAATCGTATCATCAAGCTCCTGGAAGAGGATGATA AGGATGTCTCAGAAGAAAAACAACTGAAGTATATCAAGAAACTGACACACTGTTATCAGAATGGATTTCCTCTAAGAGATTTGGCACAGATATTTAAAATTCTGAGTCTGTGTGCAGAAAAAATCGAA AAGCAGCCATGTTTTGTAGAGCCTGCATCTGAAATCATAAAATTGTGTGGCTTGCCATTTTTGAAAAAGAAAGTATCGGATGAAATAACTTACACTGAAGATACCGCTAACTCATTTGCACTTCTGGG TGAATTAATGAAAATACCAAGTTCTAAATTAAGGATACAAATCTGTAAGTGTATTGTTGACTTCTATCATGCAGAACCACTAAAGAAACACATTTCAGGCTACCAGCAAGTTAGCTCATCATTCAAGA TTAAAATGGTAGAGGTCGGAGGATTAGCAAAAGCAATGGTCCAGTCTGCACTCCTGCTTGAGAATCAGCTTGTTGAGAAACTCTGGGTTCTTAAAGTTCTGCAGCATCTCTCTACTTCTGGAGTTAAC TGCACTTTGATGGTGAAAGCCCAAGCAGCCAGCAGAATCTGTGCTCACCTCAACGACCCGGATCCCTCAGGACAGCTTTTGTTTCGTTCATCAGAAGTACTGTGGAATTTATTGGAAAAATCTTCAAA GGAGGAAATTATACAGCAGCTCAGTAACTTGGAATGCCTGCTGACTTTGAAGGAAGTATTTAAAAATCTGGTTATGAGGGGGCATAGTCACTATGAGCGTCAGCTTAGAAATGATATATTAGTTATCA CCACAATTATAGCTCAGAACCCTGGAGCACCAATGATTGAATGTGGCTTTACCAGGGATTTGATTCTATTTGCAACTTTTAATGAAGTTAAAAGTCAAAATCCTTTGGTAAAAAGTCTTAAGCTTTTT AATTGCTATGAAGATTTTGAACTGAAGAAATTGCTATTCAATATAATTGTGATCTTGTGTAAAGATTTAACTACTGTACAGCTTTTAATCGATGGCAAAGTTATTTTGGCTTTGTTGACCTATGTAAA AAAGCCTGAGAGACTCAAAATTATTGAGTGGTCTGCAGCACAGTATGAAGAACTACAACTGCATGCAATTGCCACCTTGTCCTCAGTGGCTCCTTTGTTAATAGAGGAGTACATGTCATGCCACGGCA ATGCTCGGATCCTTGCGTTTTTAGAATGGTGTGGGCATGAGGATTCCTACTTCATTCATGGCAACAGTTTCCATGGTACAGGGGGCCGTGGAAACAAGTTTGCACAGATGCGTTACACTTTAAGACTC CTCAGAGCCATGGTTTATCTTGAAGATGAGACTGTGAACAAGGACCTTTGTGAAAGGGGGGTTATTCATCAACTGATAGAAATCTTTAAAACTATGATGAGCAGACCTGCTGAGAAGGAAGAGGCCAT TGCCTTAGAAATCCAGTCTGACACATTACTTATTCTGTCAGGTCTTTGTGAGAATTATATCCAGAGGAAGGAAATGTTCGGAACTGAAGGAGTTGACATAGTTCTCCACGTAATGAAAACAGACCCCA AGAATTTACAGAGGGGCTTAGGCTACAACGTCCTTCTTTTCAGTACATTAGACAGCATTTGGTGCTGTATTTTGGGGTGTTATTCTTCTGAAGATTATTTTCTTGAAAAGGAAGGGATTTTTCTCCTT TTGGATATTCTGGCATTGAACCAAAAAAAATTCTGTAATCTGATTCTTGGAATAATGGTTGAATTTTGTGATAATCCCAAAACTTCTGCTCATGTCAATGCTTGGCGCGGGAAGAAAGACCTGACTGC TGCTAGTCTTTTGATTAAACTGTGGAGAAAAGAGGAAAAAGAGCTAGGAGTAAAACGTGACAAGAATGGCAAGATCGTTGATACAAAGAGACCTCTATTTACTAGTTTTCAAGAAGAACAAAAGATCG TGCCCCTTCCTGCTAACTGCCCATCCATTGCGGTTATGGATGTTGCTGAAAATATCAGAGCAAAAATTTATGCTGTGTTGGATAAACTAGATTTTGAAAACTTACCAGGCTTATCTGCTGAAGATTTT GTCACCCTCTGTATAATACATAGATATCTTGATTTTAAAATTGGAGAAATATGGACTGAAGTGTCTGAAGAAATAAAGTTGGAAAAGTTAAGACTAGTCACTGTAGATGAAAAATCCTTGCACTCTAT TATAGCAGCAACAGAGAATATTGGAAAGATGGTTGCTTCCTTGCAAAGTGAGATGATCGAAAACCAAGCACTCCAGGATGTGCAAAATGAACAAAGAGTATATGCAAAAATACAAGCTACACATAAGC AGAGAGATCAGGCTCACAAGTCATGGGAAAACTTCTTGGCTAGAACATCAAATGCTAAAACATTAAAGAAAGCAAAGAGACTTCAAGAAAAGGCCATAGAATCCTCCAGATACAGCAAACGACCACAA AATGCAATATTCCACCAAACAGTTATTAAAGGCCTTAACACAACGGTAACTTCGGGCCAGGTGGTGACAGTGGAAAGCACTCCTACTCGATTGCTGGGAGGACCTCTGGCTGACACAGACATTGCTCT TAAAAAACTGCCTATTCGAGGAGGAGCCTTGCAGAAGGTGAAAGTGAAGCCGCTGGATGGCCTTAAAAAGACCGTCCCGATCTGATGTGTTCCACTGCTGCTGAAATAAATTCTACATGGAGCTTTTT AGCTAAATGTATATTTATATACAAATGCAAGGCAAAACATTTAGAATAAATATTGTAGTGAAATATAAAAATTAAAGTTAGGATAATATACTTTTTAATAGAAAACAGCACTATTTGAAAAGATTATC AGTCCCTTAACTGAAATTGTAAATGTGTTAACAATTTGGACTTTTGGCTCTACATCAATTGCTCCAAATACTTTACCCTAAGGGACATTTCTGTGGGCTTTGCATCTCCCATCATGAGTAGTTTAGAC TGTGGCAACTGTTGGCTCAAGGGGCTGAAACTGGATTAGGAGGGATCTCCTTCCAGCAACCCTACCTTATATTTATCCAGTGGAAAAGTGTGGGCATATTTTTCTCAGTAACTGGTGTCGCCCCCTCT ATGTGTTGGAGCCTTGCTTGGCCAGGCCCACATGCCTACTCTAGAGCACCTTACCTCAGAGCCAGCGAGATCTGAATACTCCTTGCTCTTGGAGCCATAAACAGTCCAACATCATCTAAAATACCTTA ATGGAATCAGGAATCAAGGTGCTATTATCAGAAGGATCTACGAATACCAAAGCAATACATATGTTGGTGAAAGCATTCTATTAGTAAAGGCAATGGCCAGTCACAAGCTAAAAATAAAAACAAGCATA TACACAGTTTTACTCTAAACATATAATTTTTCAAAGTGCAGCTAGAGAGATAGATCTTTAAATGCACTGGCTGTTCTTCCAGAGGCACCAACATAACAGTTCACAACCTTATAATTCCAGTCCCAGAG GATGTGACCTTTCTTCTGGCCCCCTCAAGCACCAGACACTCACATGGTGCACAGACATATGTGCAAGCAAAACTCCCATAGACATAGAAGAGATAAAATTTTAAATTCAGTAAATACAAGTTTGAAAC TAATTCTCATGCTATTTCTCCGATGGGAAAGGGGCAGGTAGTATGTGGGTAAGCAGATAGAAGAATGCAACATGTCCATACAAATGGTACCAAATAATGTCACATTAAAATCTCAGACACCCAGAATC CTTTGCTGTGTCCACAGCTAAGAGCAATGAATCTTATAGACTATGAGCTTTGTCAGACTCGTAGTTCCGCGAAGGCAAGGAAAGAACGTGTCTAATTTACCATTTGACCAGCACCTCAGTAACGAAGT TAGTGATGAAGGCTTTGTCTCTGGCAGCGTTTCCCTTGACATCTTAAATGCAGCAATGCCCTGACCTCAAAGGAAAGACTCAGCCCACAAGATGTACTGCACAAGTGATGCTAAGCAGGGAGAGCATG CTAAAGTAGTTCAAATACGTGTGCTTCAAAGCCGCCATGGGTTTTGATCAAGTTACAAGGTATAAATGAAAACATTATAGAAAAATTGTTGTGATTTGGTTGAGGATCAGTTTTACATATAGGTCCTA TCTCCAAATTGATTTAAACTGATCCCCGTCAGCGCCATCTGAGGTCTACAGACTGTTCTGCTACCCAGTAGGAAGAGAGAAGACAAAATAAGACAGGTTATTTTCTAGCAGGTATTTACTACATGGAG AAGTATAGGCTGGTGGAAAGCAGCAATAGTGCTCAAAGCAGAAACTCTACGCACAGTAGACGGATCTCTAGCAAGCTTGTTTCTCTGATACAGTTCCGGCCGTCACACAGCGAGCCAGGGAGGCTACC ACTCTGACAGCAGCACAAACTTCCCGGCTTTTCTTCCTCCCTCTATCCTATAACTGCTCCTCGTGAGTCCAAGTGGATATGGCATCCGAGTGGCCCTGCCTGGGCAATGGACAGTCTATTTTCTTCTA TGAGTCAGCTGAGACAAACTTGCAAGCCTTAAAACTGAGATATGTACTAATCAGATAAATAAAACTTGTATTTTGAAATCAGAA
hide sequence
RefSeq Acc Id:
XM_006236074 ⟹ XP_006236136
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 4 29,367,633 - 29,405,513 (+) NCBI mRatBN7.2 4 28,412,805 - 28,452,562 (+) NCBI Rnor_6.0 4 25,571,764 - 25,611,470 (+) NCBI Rnor_5.0 4 25,445,683 - 25,518,638 (+) NCBI
Sequence:
GCTGAAATGAAAGGCATGTGCCACCATGCCCAGCCCACGCCTAGTTTTCTACTTTGGTGTTAAAGATTCAAATTCAAGTTCTCATGCTTGTAGAGCAAGTGTCCTTACCCGGCTACCAGCAAGTTAGC TCATCATTCAAGATTAAAATGGTAGAGGTCGGAGGATTAGCAAAAGCAATGGTCCAGTCTGCACTCCTGCTTGAGAATCAGCTTGTTGAGAAACTCTGGGTTCTTAAAGTTCTGCAGCATCTCTCTAC TTCTGGAGTTAACTGCACTTTGATGGTGAAAGCCCAAGCAGCCAGCAGAATCTGTGCTCACCTCAACGACCCGGATCCCTCAGGACAGCTTTTGTTTCGTTCATCAGAAGTACTGTGGAATTTATTGG AAAAATCTTCAAAGGAGGAAATTATACAGCAGCTCAGTAACTTGGAATGCCTGCTGACTTTGAAGGAAGTATTTAAAAATCTGGTTATGAGGGGGCATAGTCACTATGAGCGTCAGCTTAGAAATGAT ATATTAGTTATCACCACAATTATAGCTCAGAACCCTGGAGCACCAATGATTGAATGTGGCTTTACCAGGGATTTGATTCTATTTGCAACTTTTAATGAAGTTAAAAGTCAAAATCCTTTGGTAAAAAG TCTTAAGCTTTTTAATTGCTATGAAGATTTTGAACTGAAGAAATTGCTATTCAATATAATTGTGATCTTGTGTAAAGATTTAACTACTGTACAGCTTTTAATCGATGGCAAAGTTATTTTGGCTTTGT TGACCTATGTAAAAAAGCCTGAGAGACTCAAAATTATTGAGTGGTCTGCAGCACAGTATGAAGAACTACAACTGCATGCAATTGCCACCTTGTCCTCAGTGGCTCCTTTGTTAATAGAGGAGTACATG TCATGCCACGGCAATGCTCGGATCCTTGCGTTTTTAGAATGGTGTGGGCATGAGGATTCCTACTTCATTCATGGCAACAGTTTCCATGGTACAGGGGGCCGTGGAAACAAGTTTGCACAGATGCGTTA CACTTTAAGACTCCTCAGAGCCATGGTTTATCTTGAAGATGAGACTGTGAACAAGGACCTTTGTGAAAGGGGGGTTATTCATCAACTGATAGAAATCTTTAAAACTATGATGAGCAGACCTGCTGAGA AGGAAGAGGCCATTGCCTTAGAAATCCAGTCTGACACATTACTTATTCTGTCAGGTCTTTGTGAGAATTATATCCAGAGGAAGGAAATGTTCGGAACTGAAGGAGTTGACATAGTTCTCCACGTAATG AAAACAGACCCCAAGAATTTACAGAGGGGCTTAGGCTACAACGTCCTTCTTTTCAGTACATTAGACAGCATTTGGTGCTGTATTTTGGGGTGTTATTCTTCTGAAGATTATTTTCTTGAAAAGGAAGG GATTTTTCTCCTTTTGGATATTCTGGCATTGAACCAAAAAAAATTCTGTAATCTGATTCTTGGAATAATGGTTGAATTTTGTGATAATCCCAAAACTTCTGCTCATGTCAATGCTTGGCGCGGGAAGA AAGACCTGACTGCTGCTAGTCTTTTGATTAAACTGTGGAGAAAAGAGGAAAAAGAGCTAGGAGTAAAACGTGACAAGAATGGCAAGATCGTTGATACAAAGAGACCTCTATTTACTAGTTTTCAAGAA GAACAAAAGATCGTGCCCCTTCCTGCTAACTGCCCATCCATTGCGGTTATGGATGTTGCTGAAAATATCAGAGCAAAAATTTATGCTGTGTTGGATAAACTAGATTTTGAAAACTTACCAGGCTTATC TGCTGAAGATTTTGTCACCCTCTGTATAATACATAGATATCTTGATTTTAAAATTGGAGAAATATGGACTGAAGTGTCTGAAGAAATAAAGTTGGAAAAGTTAAGACTAGTCACTGTAGATGAAAAAT CCTTGCACTCTATTATAGCAGCAACAGAGAATATTGGAAAGATGGTTGCTTCCTTGCAAAGTGAGATGATCGAAAACCAAGCACTCCAGGATGTGCAAAATGAACAAAGAGTATATGCAAAAATACAA GCTACACATAAGCAGAGAGATCAGGCTCACAAGTCATGGGAAAACTTCTTGGCTAGAACATCAAATGCTAAAACATTAAAGAAAGCAAAGAGACTTCAAGAAAAGGCCATAGAATCCTCCAGATACAG CAAACGACCACAAAATGCAATATTCCACCAAACAGTTATTAAAGGCCTTAACACAACGGTAACTTCGGGCCAGGTGGTGACAGTGGAAAGCACTCCTACTCGATTGCTGGGAGGACCTCTGGCTGACA CAGACATTGCTCTTAAAAAACTGCCTATTCGAGGAGGAGCCTTGCAGAAGGTGAAAGTGAAGCCGCTGGATGGCCTTAAAAAGACCGTCCCGATCTGATGTGTTCCACTGCTGCTGAAATAAATTCTA CATGGAGCTTTTTAGCTAAATGTATATTTATATACAAATGCAAGGCAAAACATTTAGAATAAATATTGTAGTGAAATATAAAAATTAAAGTTAGGATAATATACTTTTTAATAGAAAACAGCACTATT TGAAAAGATTATCAGTCCCTTAACTGAAATTGTAAATGTGTTAACAATTTGGACTTTTGGCTCTACATCAATTGCTCCAAATACTTTACCCTAAGGGACATTTCTGTGGGCTTTGCATCTCCCATCAT GAGTAGTTTAGACTGTGGCAACTGTTGGCTCAAGGGGCTGAAACTGGATTAGGAGGGATCTCCTTCCAGCAACCCTACCTTATATTTATCCAGTGGAAAAGTGTGGGCATATTTTTCTCAGTAACTGG TGTCGCCCCCTCTATGTGTTGGAGCCTTGCTTGGCCAGGCCCACATGCCTACTCTAGAGCACCTTACCTCAGAGCCAGCGAGATCTGAATACTCCTTGCTCTTGGAGCCATAAACAGTCCAACATCAT CTAAAATACCTTAATGGAATCAGGAATCAAGGTGCTATTATCAGAAGGATCTACGAATACCAAAGCAATACATATGTTGGTGAAAGCATTCTATTAGTAAAGGCAATGGCCAGTCACAAGCTAAAAAT AAAAACAAGCATATACACAGTTTTACTCTAAACATATAATTTTTCAAAGTGCAGCTAGAGAGATAGATCTTTAAATGCACTGGCTGTTCTTCCAGAGGCACCAACATAACAGTTCACAACCTTATAAT TCCAGTCCCAGAGGATGTGACCTTTCTTCTGGCCCCCTCAAGCACCAGACACTCACATGGTGCACAGACATATGTGCAAGCAAAACTCCCATAGACATAGAAGAGATAAAATTTTAAATTCAGTAAAT ACAAGTTTGAAACTAATTCTCATGCTATTTCTCCGATGGGAAAGGGGCAGGTAGTATGTGGGTAAGCAGATAGAAGAATGCAACATGTCCATACAAATGGTACCAAATAATGTCACATTAAAATCTCA GACACCCAGAATCCTTTGCTGTGTCCACAGCTAAGAGCAATGAATCTTATAGACTATGAGCTTTGTCAGACTCGTAGTTCCGCGAAGGCAAGGAAAGAACGTGTCTAATTTACCATTTGACCAGCACC TCAGTAACGAAGTTAGTGATGAAGGCTTTGTCTCTGGCAGCGTTTCCCTTGACATCTTAAATGCAGCAATGCCCTGACCTCAAAGGAAAGACTCAGCCCACAAGATGTACTGCACAAGTGATGCTAAG CAGGGAGAGCATGCTAAAGTAGTTCAAATACGTGTGCTTCAAAGCCGCCATGGGTTTTGATCAAGTTACAAGGTATAAATGAAAACATTATAGAAAAATTGTTGTGATTTGGTTGAGGATCAGTTTTA CATATAGGTCCTATCTCCAAATTGATTTAAACTGATCCCCGTCAGCGCCATCTGAGGTCTACAGACTGTTCTGCTACCCAGTAGGAAGAGAGAAGACAAAATAAGACAGGTTATTTTCTAGCAGGTAT TTACTACATGGAGAAGTATAGGCTGGTGGAAAGCAGCAATAGTGCTCAAAGCAGAAACTCTACGCACAGTAGACGGATCTCTAGCAAGCTTGTTTCTCTGATACAGTTCCGGCCGTCACACAGCGAGC CAGGGAGGCTACCACTCTGACAGCAGCACAAACTTCCCGGCTTTTCTTCCTCCCTCTATCCTATAACTGCTCCTCGTGAGTCCAAGTGGATATGGCATCCGAGTGGCCCTGCCTGGGCAATGGACAGT CTATTTTCTTCTATGAGTCAGCTGAGACAAACTTGCAAGCCTTAAAACTGAGATATGTACTAATCAGATAAATAAAACTTGTATTTTGAAATCAGAA
hide sequence
RefSeq Acc Id:
XM_008762733 ⟹ XP_008760955
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 4 29,350,555 - 29,405,513 (+) NCBI mRatBN7.2 4 28,393,002 - 28,452,562 (+) NCBI Rnor_6.0 4 25,554,662 - 25,611,470 (+) NCBI
Sequence:
TTAAAATTCTGAGTCTGTGTGCAGAAAAAATCGAAAAGCAGCCATGTTTTGTAGAGCCTGCATCTGAAATCATAAAATTGTGTGGAATATAAATGTTTCCCCTTTTATGAGGGATGTATCAACCTCGG AATCTATTTAAAATTACTCTGTCGTTCTTCATTCTTACTGAAGCTTGCCATTTTTGAAAAAGAAAGTATCGGATGAAATAACTTACACTGAAGATACCGCTAACTCATTTGCACTTCTGGGTGAATTA ATGAAAATACCAAGTTCTAAATTAAGGATACAAATCTGTAAGTGTATTGTTGACTTCTATCATGCAGAACCACTAAAGAAACACATTTCAGGCTACCAGCAAGTTAGCTCATCATTCAAGATTAAAAT GGTAGAGGTCGGAGGATTAGCAAAAGCAATGGTCCAGTCTGCACTCCTGCTTGAGAATCAGCTTGTTGAGAAACTCTGGGTTCTTAAAGTTCTGCAGCATCTCTCTACTTCTGGAGTTAACTGCACTT TGATGGTGAAAGCCCAAGCAGCCAGCAGAATCTGTGCTCACCTCAACGACCCGGATCCCTCAGGACAGCTTTTGTTTCGTTCATCAGAAGTACTGTGGAATTTATTGGAAAAATCTTCAAAGGAGGAA ATTATACAGCAGCTCAGTAACTTGGAATGCCTGCTGACTTTGAAGGAAGTATTTAAAAATCTGGTTATGAGGGGGCATAGTCACTATGAGCGTCAGCTTAGAAATGATATATTAGTTATCACCACAAT TATAGCTCAGAACCCTGGAGCACCAATGATTGAATGTGGCTTTACCAGGGATTTGATTCTATTTGCAACTTTTAATGAAGTTAAAAGTCAAAATCCTTTGGTAAAAAGTCTTAAGCTTTTTAATTGCT ATGAAGATTTTGAACTGAAGAAATTGCTATTCAATATAATTGTGATCTTGTGTAAAGATTTAACTACTGTACAGCTTTTAATCGATGGCAAAGTTATTTTGGCTTTGTTGACCTATGTAAAAAAGCCT GAGAGACTCAAAATTATTGAGTGGTCTGCAGCACAGTATGAAGAACTACAACTGCATGCAATTGCCACCTTGTCCTCAGTGGCTCCTTTGTTAATAGAGGAGTACATGTCATGCCACGGCAATGCTCG GATCCTTGCGTTTTTAGAATGGTGTGGGCATGAGGATTCCTACTTCATTCATGGCAACAGTTTCCATGGTACAGGGGGCCGTGGAAACAAGTTTGCACAGATGCGTTACACTTTAAGACTCCTCAGAG CCATGGTTTATCTTGAAGATGAGACTGTGAACAAGGACCTTTGTGAAAGGGGGGTTATTCATCAACTGATAGAAATCTTTAAAACTATGATGAGCAGACCTGCTGAGAAGGAAGAGGCCATTGCCTTA GAAATCCAGTCTGACACATTACTTATTCTGTCAGGTCTTTGTGAGAATTATATCCAGAGGAAGGAAATGTTCGGAACTGAAGGAGTTGACATAGTTCTCCACGTAATGAAAACAGACCCCAAGAATTT ACAGAGGGGCTTAGGCTACAACGTCCTTCTTTTCAGTACATTAGACAGCATTTGGTGCTGTATTTTGGGGTGTTATTCTTCTGAAGATTATTTTCTTGAAAAGGAAGGGATTTTTCTCCTTTTGGATA TTCTGGCATTGAACCAAAAAAAATTCTGTAATCTGATTCTTGGAATAATGGTTGAATTTTGTGATAATCCCAAAACTTCTGCTCATGTCAATGCTTGGCGCGGGAAGAAAGACCTGACTGCTGCTAGT CTTTTGATTAAACTGTGGAGAAAAGAGGAAAAAGAGCTAGGAGTAAAACGTGACAAGAATGGCAAGATCGTTGATACAAAGAGACCTCTATTTACTAGTTTTCAAGAAGAACAAAAGATCGTGCCCCT TCCTGCTAACTGCCCATCCATTGCGGTTATGGATGTTGCTGAAAATATCAGAGCAAAAATTTATGCTGTGTTGGATAAACTAGATTTTGAAAACTTACCAGGCTTATCTGCTGAAGATTTTGTCACCC TCTGTATAATACATAGATATCTTGATTTTAAAATTGGAGAAATATGGACTGAAGTGTCTGAAGAAATAAAGTTGGAAAAGTTAAGACTAGTCACTGTAGATGAAAAATCCTTGCACTCTATTATAGCA GCAACAGAGAATATTGGAAAGATGGTTGCTTCCTTGCAAAGTGAGATGATCGAAAACCAAGCACTCCAGGATGTGCAAAATGAACAAAGAGTATATGCAAAAATACAAGCTACACATAAGCAGAGAGA TCAGGCTCACAAGTCATGGGAAAACTTCTTGGCTAGAACATCAAATGCTAAAACATTAAAGAAAGCAAAGAGACTTCAAGAAAAGGCCATAGAATCCTCCAGATACAGCAAACGACCACAAAATGCAA TATTCCACCAAACAGTTATTAAAGGCCTTAACACAACGGTAACTTCGGGCCAGGTGGTGACAGTGGAAAGCACTCCTACTCGATTGCTGGGAGGACCTCTGGCTGACACAGACATTGCTCTTAAAAAA CTGCCTATTCGAGGAGGAGCCTTGCAGAAGGTGAAAGTGAAGCCGCTGGATGGCCTTAAAAAGACCGTCCCGATCTGATGTGTTCCACTGCTGCTGAAATAAATTCTACATGGAGCTTTTTAGCTAAA TGTATATTTATATACAAATGCAAGGCAAAACATTTAGAATAAATATTGTAGTGAAATATAAAAATTAAAGTTAGGATAATATACTTTTTAATAGAAAACAGCACTATTTGAAAAGATTATCAGTCCCT TAACTGAAATTGTAAATGTGTTAACAATTTGGACTTTTGGCTCTACATCAATTGCTCCAAATACTTTACCCTAAGGGACATTTCTGTGGGCTTTGCATCTCCCATCATGAGTAGTTTAGACTGTGGCA ACTGTTGGCTCAAGGGGCTGAAACTGGATTAGGAGGGATCTCCTTCCAGCAACCCTACCTTATATTTATCCAGTGGAAAAGTGTGGGCATATTTTTCTCAGTAACTGGTGTCGCCCCCTCTATGTGTT GGAGCCTTGCTTGGCCAGGCCCACATGCCTACTCTAGAGCACCTTACCTCAGAGCCAGCGAGATCTGAATACTCCTTGCTCTTGGAGCCATAAACAGTCCAACATCATCTAAAATACCTTAATGGAAT CAGGAATCAAGGTGCTATTATCAGAAGGATCTACGAATACCAAAGCAATACATATGTTGGTGAAAGCATTCTATTAGTAAAGGCAATGGCCAGTCACAAGCTAAAAATAAAAACAAGCATATACACAG TTTTACTCTAAACATATAATTTTTCAAAGTGCAGCTAGAGAGATAGATCTTTAAATGCACTGGCTGTTCTTCCAGAGGCACCAACATAACAGTTCACAACCTTATAATTCCAGTCCCAGAGGATGTGA CCTTTCTTCTGGCCCCCTCAAGCACCAGACACTCACATGGTGCACAGACATATGTGCAAGCAAAACTCCCATAGACATAGAAGAGATAAAATTTTAAATTCAGTAAATACAAGTTTGAAACTAATTCT CATGCTATTTCTCCGATGGGAAAGGGGCAGGTAGTATGTGGGTAAGCAGATAGAAGAATGCAACATGTCCATACAAATGGTACCAAATAATGTCACATTAAAATCTCAGACACCCAGAATCCTTTGCT GTGTCCACAGCTAAGAGCAATGAATCTTATAGACTATGAGCTTTGTCAGACTCGTAGTTCCGCGAAGGCAAGGAAAGAACGTGTCTAATTTACCATTTGACCAGCACCTCAGTAACGAAGTTAGTGAT GAAGGCTTTGTCTCTGGCAGCGTTTCCCTTGACATCTTAAATGCAGCAATGCCCTGACCTCAAAGGAAAGACTCAGCCCACAAGATGTACTGCACAAGTGATGCTAAGCAGGGAGAGCATGCTAAAGT AGTTCAAATACGTGTGCTTCAAAGCCGCCATGGGTTTTGATCAAGTTACAAGGTATAAATGAAAACATTATAGAAAAATTGTTGTGATTTGGTTGAGGATCAGTTTTACATATAGGTCCTATCTCCAA ATTGATTTAAACTGATCCCCGTCAGCGCCATCTGAGGTCTACAGACTGTTCTGCTACCCAGTAGGAAGAGAGAAGACAAAATAAGACAGGTTATTTTCTAGCAGGTATTTACTACATGGAGAAGTATA GGCTGGTGGAAAGCAGCAATAGTGCTCAAAGCAGAAACTCTACGCACAGTAGACGGATCTCTAGCAAGCTTGTTTCTCTGATACAGTTCCGGCCGTCACACAGCGAGCCAGGGAGGCTACCACTCTGA CAGCAGCACAAACTTCCCGGCTTTTCTTCCTCCCTCTATCCTATAACTGCTCCTCGTGAGTCCAAGTGGATATGGCATCCGAGTGGCCCTGCCTGGGCAATGGACAGTCTATTTTCTTCTATGAGTCA GCTGAGACAAACTTGCAAGCCTTAAAACTGAGATATGTACTAATCAGATAAATAAAACTTGTATTTTGAAATCAGAA
hide sequence
RefSeq Acc Id:
XM_008762734 ⟹ XP_008760956
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 4 29,350,555 - 29,405,513 (+) NCBI mRatBN7.2 4 28,395,748 - 28,452,562 (+) NCBI Rnor_6.0 4 25,554,665 - 25,611,470 (+) NCBI
Sequence:
AAATTCTGAGTCTGTGTGCAGAAAAAATCGAAAAGCAGCCATGTTTTGTAGAGCCTGCATCTGAAATCATAAAATTGTGTGGGTGAATTAATGAAAATACCAAGTTCTAAATTAAGGATACAAATCTG TAAGTGTATTGTTGACTTCTATCATGCAGAACCACTAAAGAAACACATTTCAGGCTACCAGCAAGTTAGCTCATCATTCAAGATTAAAATGGTAGAGGTCGGAGGATTAGCAAAAGCAATGGTCCAGT CTGCACTCCTGCTTGAGAATCAGCTTGTTGAGAAACTCTGGGTTCTTAAAGTTCTGCAGCATCTCTCTACTTCTGGAGTTAACTGCACTTTGATGGTGAAAGCCCAAGCAGCCAGCAGAATCTGTGCT CACCTCAACGACCCGGATCCCTCAGGACAGCTTTTGTTTCGTTCATCAGAAGTACTGTGGAATTTATTGGAAAAATCTTCAAAGGAGGAAATTATACAGCAGCTCAGTAACTTGGAATGCCTGCTGAC TTTGAAGGAAGTATTTAAAAATCTGGTTATGAGGGGGCATAGTCACTATGAGCGTCAGCTTAGAAATGATATATTAGTTATCACCACAATTATAGCTCAGAACCCTGGAGCACCAATGATTGAATGTG GCTTTACCAGGGATTTGATTCTATTTGCAACTTTTAATGAAGTTAAAAGTCAAAATCCTTTGGTAAAAAGTCTTAAGCTTTTTAATTGCTATGAAGATTTTGAACTGAAGAAATTGCTATTCAATATA ATTGTGATCTTGTGTAAAGATTTAACTACTGTACAGCTTTTAATCGATGGCAAAGTTATTTTGGCTTTGTTGACCTATGTAAAAAAGCCTGAGAGACTCAAAATTATTGAGTGGTCTGCAGCACAGTA TGAAGAACTACAACTGCATGCAATTGCCACCTTGTCCTCAGTGGCTCCTTTGTTAATAGAGGAGTACATGTCATGCCACGGCAATGCTCGGATCCTTGCGTTTTTAGAATGGTGTGGGCATGAGGATT CCTACTTCATTCATGGCAACAGTTTCCATGGTACAGGGGGCCGTGGAAACAAGTTTGCACAGATGCGTTACACTTTAAGACTCCTCAGAGCCATGGTTTATCTTGAAGATGAGACTGTGAACAAGGAC CTTTGTGAAAGGGGGGTTATTCATCAACTGATAGAAATCTTTAAAACTATGATGAGCAGACCTGCTGAGAAGGAAGAGGCCATTGCCTTAGAAATCCAGTCTGACACATTACTTATTCTGTCAGGTCT TTGTGAGAATTATATCCAGAGGAAGGAAATGTTCGGAACTGAAGGAGTTGACATAGTTCTCCACGTAATGAAAACAGACCCCAAGAATTTACAGAGGGGCTTAGGCTACAACGTCCTTCTTTTCAGTA CATTAGACAGCATTTGGTGCTGTATTTTGGGGTGTTATTCTTCTGAAGATTATTTTCTTGAAAAGGAAGGGATTTTTCTCCTTTTGGATATTCTGGCATTGAACCAAAAAAAATTCTGTAATCTGATT CTTGGAATAATGGTTGAATTTTGTGATAATCCCAAAACTTCTGCTCATGTCAATGCTTGGCGCGGGAAGAAAGACCTGACTGCTGCTAGTCTTTTGATTAAACTGTGGAGAAAAGAGGAAAAAGAGCT AGGAGTAAAACGTGACAAGAATGGCAAGATCGTTGATACAAAGAGACCTCTATTTACTAGTTTTCAAGAAGAACAAAAGATCGTGCCCCTTCCTGCTAACTGCCCATCCATTGCGGTTATGGATGTTG CTGAAAATATCAGAGCAAAAATTTATGCTGTGTTGGATAAACTAGATTTTGAAAACTTACCAGGCTTATCTGCTGAAGATTTTGTCACCCTCTGTATAATACATAGATATCTTGATTTTAAAATTGGA GAAATATGGACTGAAGTGTCTGAAGAAATAAAGTTGGAAAAGTTAAGACTAGTCACTGTAGATGAAAAATCCTTGCACTCTATTATAGCAGCAACAGAGAATATTGGAAAGATGGTTGCTTCCTTGCA AAGTGAGATGATCGAAAACCAAGCACTCCAGGATGTGCAAAATGAACAAAGAGTATATGCAAAAATACAAGCTACACATAAGCAGAGAGATCAGGCTCACAAGTCATGGGAAAACTTCTTGGCTAGAA CATCAAATGCTAAAACATTAAAGAAAGCAAAGAGACTTCAAGAAAAGGCCATAGAATCCTCCAGATACAGCAAACGACCACAAAATGCAATATTCCACCAAACAGTTATTAAAGGCCTTAACACAACG GTAACTTCGGGCCAGGTGGTGACAGTGGAAAGCACTCCTACTCGATTGCTGGGAGGACCTCTGGCTGACACAGACATTGCTCTTAAAAAACTGCCTATTCGAGGAGGAGCCTTGCAGAAGGTGAAAGT GAAGCCGCTGGATGGCCTTAAAAAGACCGTCCCGATCTGATGTGTTCCACTGCTGCTGAAATAAATTCTACATGGAGCTTTTTAGCTAAATGTATATTTATATACAAATGCAAGGCAAAACATTTAGA ATAAATATTGTAGTGAAATATAAAAATTAAAGTTAGGATAATATACTTTTTAATAGAAAACAGCACTATTTGAAAAGATTATCAGTCCCTTAACTGAAATTGTAAATGTGTTAACAATTTGGACTTTT GGCTCTACATCAATTGCTCCAAATACTTTACCCTAAGGGACATTTCTGTGGGCTTTGCATCTCCCATCATGAGTAGTTTAGACTGTGGCAACTGTTGGCTCAAGGGGCTGAAACTGGATTAGGAGGGA TCTCCTTCCAGCAACCCTACCTTATATTTATCCAGTGGAAAAGTGTGGGCATATTTTTCTCAGTAACTGGTGTCGCCCCCTCTATGTGTTGGAGCCTTGCTTGGCCAGGCCCACATGCCTACTCTAGA GCACCTTACCTCAGAGCCAGCGAGATCTGAATACTCCTTGCTCTTGGAGCCATAAACAGTCCAACATCATCTAAAATACCTTAATGGAATCAGGAATCAAGGTGCTATTATCAGAAGGATCTACGAAT ACCAAAGCAATACATATGTTGGTGAAAGCATTCTATTAGTAAAGGCAATGGCCAGTCACAAGCTAAAAATAAAAACAAGCATATACACAGTTTTACTCTAAACATATAATTTTTCAAAGTGCAGCTAG AGAGATAGATCTTTAAATGCACTGGCTGTTCTTCCAGAGGCACCAACATAACAGTTCACAACCTTATAATTCCAGTCCCAGAGGATGTGACCTTTCTTCTGGCCCCCTCAAGCACCAGACACTCACAT GGTGCACAGACATATGTGCAAGCAAAACTCCCATAGACATAGAAGAGATAAAATTTTAAATTCAGTAAATACAAGTTTGAAACTAATTCTCATGCTATTTCTCCGATGGGAAAGGGGCAGGTAGTATG TGGGTAAGCAGATAGAAGAATGCAACATGTCCATACAAATGGTACCAAATAATGTCACATTAAAATCTCAGACACCCAGAATCCTTTGCTGTGTCCACAGCTAAGAGCAATGAATCTTATAGACTATG AGCTTTGTCAGACTCGTAGTTCCGCGAAGGCAAGGAAAGAACGTGTCTAATTTACCATTTGACCAGCACCTCAGTAACGAAGTTAGTGATGAAGGCTTTGTCTCTGGCAGCGTTTCCCTTGACATCTT AAATGCAGCAATGCCCTGACCTCAAAGGAAAGACTCAGCCCACAAGATGTACTGCACAAGTGATGCTAAGCAGGGAGAGCATGCTAAAGTAGTTCAAATACGTGTGCTTCAAAGCCGCCATGGGTTTT GATCAAGTTACAAGGTATAAATGAAAACATTATAGAAAAATTGTTGTGATTTGGTTGAGGATCAGTTTTACATATAGGTCCTATCTCCAAATTGATTTAAACTGATCCCCGTCAGCGCCATCTGAGGT CTACAGACTGTTCTGCTACCCAGTAGGAAGAGAGAAGACAAAATAAGACAGGTTATTTTCTAGCAGGTATTTACTACATGGAGAAGTATAGGCTGGTGGAAAGCAGCAATAGTGCTCAAAGCAGAAAC TCTACGCACAGTAGACGGATCTCTAGCAAGCTTGTTTCTCTGATACAGTTCCGGCCGTCACACAGCGAGCCAGGGAGGCTACCACTCTGACAGCAGCACAAACTTCCCGGCTTTTCTTCCTCCCTCTA TCCTATAACTGCTCCTCGTGAGTCCAAGTGGATATGGCATCCGAGTGGCCCTGCCTGGGCAATGGACAGTCTATTTTCTTCTATGAGTCAGCTGAGACAAACTTGCAAGCCTTAAAACTGAGATATGT ACTAATCAGATAAATAAAACTTGTATTTTGAAATCAGAA
hide sequence
RefSeq Acc Id:
XM_039108576 ⟹ XP_038964504
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 4 29,369,054 - 29,405,513 (+) NCBI mRatBN7.2 4 28,414,228 - 28,452,562 (+) NCBI
RefSeq Acc Id:
XM_063286814 ⟹ XP_063142884
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 4 29,341,340 - 29,405,513 (+) NCBI
RefSeq Acc Id:
XP_003749736 ⟸ XM_003749688
- Peptide Label:
isoform X1
- Sequence:
MSTAEASAVAADAAEVGGRTKTGSPRTIPVFGVAIPDGEMQDIFKPMDLNRIIKLLEEDDKDVSEEKQLKYIKKLTHCYQNGFPLRDLAQIFKILSLCAEKIEKQPCFVEPASEIIKLCGLPFLKKKV SDEITYTEDTANSFALLGELMKIPSSKLRIQICKCIVDFYHAEPLKKHISGYQQVSSSFKIKMVEVGGLAKAMVQSALLLENQLVEKLWVLKVLQHLSTSGVNCTLMVKAQAASRICAHLNDPDPSGQ LLFRSSEVLWNLLEKSSKEEIIQQLSNLECLLTLKEVFKNLVMRGHSHYERQLRNDILVITTIIAQNPGAPMIECGFTRDLILFATFNEVKSQNPLVKSLKLFNCYEDFELKKLLFNIIVILCKDLTT VQLLIDGKVILALLTYVKKPERLKIIEWSAAQYEELQLHAIATLSSVAPLLIEEYMSCHGNARILAFLEWCGHEDSYFIHGNSFHGTGGRGNKFAQMRYTLRLLRAMVYLEDETVNKDLCERGVIHQL IEIFKTMMSRPAEKEEAIALEIQSDTLLILSGLCENYIQRKEMFGTEGVDIVLHVMKTDPKNLQRGLGYNVLLFSTLDSIWCCILGCYSSEDYFLEKEGIFLLLDILALNQKKFCNLILGIMVEFCDN PKTSAHVNAWRGKKDLTAASLLIKLWRKEEKELGVKRDKNGKIVDTKRPLFTSFQEEQKIVPLPANCPSIAVMDVAENIRAKIYAVLDKLDFENLPGLSAEDFVTLCIIHRYLDFKIGEIWTEVSEEI KLEKLRLVTVDEKSLHSIIAATENIGKMVASLQSEMIENQALQDVQNEQRVYAKIQATHKQRDQAHKSWENFLARTSNAKTLKKAKRLQEKAIESSRYSKRPQNAIFHQTVIKGLNTTVTSGQVVTVE STPTRLLGGPLADTDIALKKLPIRGGALQKVKVKPLDGLKKTVPI
hide sequence
RefSeq Acc Id:
XP_006236136 ⟸ XM_006236074
- Peptide Label:
isoform X3
- Sequence:
MLVEQVSLPGYQQVSSSFKIKMVEVGGLAKAMVQSALLLENQLVEKLWVLKVLQHLSTSGVNCT LMVKAQAASRICAHLNDPDPSGQLLFRSSEVLWNLLEKSSKEEIIQQLSNLECLLTLKEVFKNLVMRGHSHYERQLRNDILVITTIIAQNPGAPMIECGFTRDLILFATFNEVKSQNPLVKSLKLFNC YEDFELKKLLFNIIVILCKDLTTVQLLIDGKVILALLTYVKKPERLKIIEWSAAQYEELQLHAIATLSSVAPLLIEEYMSCHGNARILAFLEWCGHEDSYFIHGNSFHGTGGRGNKFAQMRYTLRLLR AMVYLEDETVNKDLCERGVIHQLIEIFKTMMSRPAEKEEAIALEIQSDTLLILSGLCENYIQRKEMFGTEGVDIVLHVMKTDPKNLQRGLGYNVLLFSTLDSIWCCILGCYSSEDYFLEKEGIFLLLD ILALNQKKFCNLILGIMVEFCDNPKTSAHVNAWRGKKDLTAASLLIKLWRKEEKELGVKRDKNGKIVDTKRPLFTSFQEEQKIVPLPANCPSIAVMDVAENIRAKIYAVLDKLDFENLPGLSAEDFVT LCIIHRYLDFKIGEIWTEVSEEIKLEKLRLVTVDEKSLHSIIAATENIGKMVASLQSEMIENQALQDVQNEQRVYAKIQATHKQRDQAHKSWENFLARTSNAKTLKKAKRLQEKAIESSRYSKRPQNA IFHQTVIKGLNTTVTSGQVVTVESTPTRLLGGPLADTDIALKKLPIRGGALQKVKVKPLDGLKKTVPI
hide sequence
RefSeq Acc Id:
XP_008760955 ⟸ XM_008762733
- Peptide Label:
isoform X2
- Sequence:
MKIPSSKLRIQICKCIVDFYHAEPLKKHISGYQQVSSSFKIKMVEVGGLAKAMVQSALLLENQLVEKLWVLKVLQHLSTSGVNCTLMVKAQAASRICAHLNDPDPSGQLLFRSSEVLWNLLEKSSKEE IIQQLSNLECLLTLKEVFKNLVMRGHSHYERQLRNDILVITTIIAQNPGAPMIECGFTRDLILFATFNEVKSQNPLVKSLKLFNCYEDFELKKLLFNIIVILCKDLTTVQLLIDGKVILALLTYVKKP ERLKIIEWSAAQYEELQLHAIATLSSVAPLLIEEYMSCHGNARILAFLEWCGHEDSYFIHGNSFHGTGGRGNKFAQMRYTLRLLRAMVYLEDETVNKDLCERGVIHQLIEIFKTMMSRPAEKEEAIAL EIQSDTLLILSGLCENYIQRKEMFGTEGVDIVLHVMKTDPKNLQRGLGYNVLLFSTLDSIWCCILGCYSSEDYFLEKEGIFLLLDILALNQKKFCNLILGIMVEFCDNPKTSAHVNAWRGKKDLTAAS LLIKLWRKEEKELGVKRDKNGKIVDTKRPLFTSFQEEQKIVPLPANCPSIAVMDVAENIRAKIYAVLDKLDFENLPGLSAEDFVTLCIIHRYLDFKIGEIWTEVSEEIKLEKLRLVTVDEKSLHSIIA ATENIGKMVASLQSEMIENQALQDVQNEQRVYAKIQATHKQRDQAHKSWENFLARTSNAKTLKKAKRLQEKAIESSRYSKRPQNAIFHQTVIKGLNTTVTSGQVVTVESTPTRLLGGPLADTDIALKK LPIRGGALQKVKVKPLDGLKKTVPI
hide sequence
RefSeq Acc Id:
XP_008760956 ⟸ XM_008762734
- Peptide Label:
isoform X2
- UniProtKB:
A0A8I6AJA3 (UniProtKB/TrEMBL)
- Sequence:
MKIPSSKLRIQICKCIVDFYHAEPLKKHISGYQQVSSSFKIKMVEVGGLAKAMVQSALLLENQL VEKLWVLKVLQHLSTSGVNCTLMVKAQAASRICAHLNDPDPSGQLLFRSSEVLWNLLEKSSKEEIIQQLSNLECLLTLKEVFKNLVMRGHSHYERQLRNDILVITTIIAQNPGAPMIECGFTRDLILF ATFNEVKSQNPLVKSLKLFNCYEDFELKKLLFNIIVILCKDLTTVQLLIDGKVILALLTYVKKPERLKIIEWSAAQYEELQLHAIATLSSVAPLLIEEYMSCHGNARILAFLEWCGHEDSYFIHGNSF HGTGGRGNKFAQMRYTLRLLRAMVYLEDETVNKDLCERGVIHQLIEIFKTMMSRPAEKEEAIALEIQSDTLLILSGLCENYIQRKEMFGTEGVDIVLHVMKTDPKNLQRGLGYNVLLFSTLDSIWCCI LGCYSSEDYFLEKEGIFLLLDILALNQKKFCNLILGIMVEFCDNPKTSAHVNAWRGKKDLTAASLLIKLWRKEEKELGVKRDKNGKIVDTKRPLFTSFQEEQKIVPLPANCPSIAVMDVAENIRAKIY AVLDKLDFENLPGLSAEDFVTLCIIHRYLDFKIGEIWTEVSEEIKLEKLRLVTVDEKSLHSIIAATENIGKMVASLQSEMIENQALQDVQNEQRVYAKIQATHKQRDQAHKSWENFLARTSNAKTLKK AKRLQEKAIESSRYSKRPQNAIFHQTVIKGLNTTVTSGQVVTVESTPTRLLGGPLADTDIALKKLPIRGGALQKVKVKPLDGLKKTVPI
hide sequence
Ensembl Acc Id:
ENSRNOP00000009264 ⟸ ENSRNOT00000009264
RefSeq Acc Id:
XP_038964504 ⟸ XM_039108576
- Peptide Label:
isoform X4
Ensembl Acc Id:
ENSRNOP00000093632 ⟸ ENSRNOT00000112626
RefSeq Acc Id:
XP_063142884 ⟸ XM_063286814
- Peptide Label:
isoform X2
RGD ID: 13692841
Promoter ID: EPDNEW_R3361
Type: initiation region
Name: Cfap69_1
Description: cilia and flagella associated protein 69
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Experiment Methods: Single-end sequencing.
Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 4 25,538,513 - 25,538,573 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2015-11-03
Cfap69
cilia and flagella associated protein 69
MGC72627
similar to RIKEN cDNA A330021E22
Data merged from RGD:1549764
737654
APPROVED
2015-07-29
Cfap69
cilia and flagella associated protein 69
LOC679610
hypothetical protein LOC679609
Data merged from RGD:1585979
737654
PROVISIONAL
2015-06-12
Cfap69
cilia and flagella associated protein 69
LOC100910867
uncharacterized LOC100910867
Nomenclature updated to reflect human and mouse nomenclature
1299863
APPROVED
2012-07-05
LOC100910867
uncharacterized LOC100910867
Symbol and Name status set to provisional
70820
PROVISIONAL
2008-01-09
LOC679610
hypothetical protein LOC679609
LOC682900
hypothetical protein LOC682900
Data merged from RGD:1592843
1643240
APPROVED
2006-11-20
LOC682900
hypothetical protein LOC682900
Symbol and Name status set to provisional
70820
PROVISIONAL
2006-11-19
LOC679610
hypothetical protein LOC679609
Symbol and Name status set to provisional
70820
PROVISIONAL
2005-09-15
MGC72627
similar to RIKEN cDNA A330021E22
Symbol and Name status set to provisional
70820
PROVISIONAL