Cfap69 (cilia and flagella associated protein 69) - Rat Genome Database

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Gene: Cfap69 (cilia and flagella associated protein 69) Chinchilla lanigera
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Symbol: Cfap69
Name: cilia and flagella associated protein 69
RGD ID: 8902587
Description: INVOLVED IN flagellated sperm motility (ortholog); olfactory behavior (ortholog); positive regulation of fertilization (ortholog); ASSOCIATED WITH pleomorphic xanthoastrocytoma (ortholog); spermatogenic failure 24 (ortholog); FOUND IN cytoplasm (ortholog); non-motile cilium (ortholog); sperm midpiece (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: cilia- and flagella-associated protein 69
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554327,501,642 - 7,571,373 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554327,501,908 - 7,569,799 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

Genomics

Comparative Map Data
Cfap69
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554327,501,642 - 7,571,373 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554327,501,908 - 7,569,799 (+)NCBIChiLan1.0ChiLan1.0
CFAP69
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl790,245,174 - 90,311,063 (+)EnsemblGRCh38hg38GRCh38
GRCh38790,245,174 - 90,320,964 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37789,874,488 - 89,940,377 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36789,712,461 - 89,777,624 (+)NCBINCBI36hg18NCBI36
Celera784,578,592 - 84,644,463 (+)NCBI
Cytogenetic Map7q21.13NCBI
HuRef784,484,583 - 84,549,528 (+)NCBIHuRef
CHM1_1789,804,453 - 89,870,457 (+)NCBICHM1_1
CRA_TCAGchr7v2789,205,264 - 89,271,137 (+)NCBI
Cfap69
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3955,629,284 - 5,714,232 (-)NCBIGRCm39mm39
GRCm39 Ensembl55,629,278 - 5,714,239 (-)Ensembl
GRCm3855,579,278 - 5,664,232 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl55,579,278 - 5,664,239 (-)EnsemblGRCm38mm10GRCm38
MGSCv3755,580,982 - 5,664,232 (-)NCBIGRCm37mm9NCBIm37
MGSCv3655,586,988 - 5,670,238 (-)NCBImm8
Celera55,527,663 - 5,605,661 (-)NCBICelera
Cytogenetic Map5A1NCBI
Cfap69
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2428,379,604 - 28,452,562 (+)NCBI
Rnor_6.0 Ensembl425,538,497 - 25,609,652 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0425,538,513 - 25,611,470 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0425,445,683 - 25,518,638 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4425,065,221 - 25,136,471 (+)NCBIRGSC3.4rn4RGSC3.4
Celera423,824,221 - 23,897,166 (+)NCBICelera
Cytogenetic Map4q13NCBI
CFAP69
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1795,856,393 - 95,936,535 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl795,856,393 - 95,922,012 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0782,254,266 - 82,353,873 (+)NCBIMhudiblu_PPA_v0panPan3
CFAP69
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11416,154,334 - 16,209,776 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1416,154,562 - 16,209,858 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1415,724,650 - 15,780,123 (+)NCBI
ROS_Cfam_1.01415,960,297 - 16,015,368 (+)NCBI
UMICH_Zoey_3.11416,120,881 - 16,175,655 (+)NCBI
UNSW_CanFamBas_1.01415,839,436 - 15,894,879 (+)NCBI
UU_Cfam_GSD_1.01416,125,476 - 16,180,557 (+)NCBI
Cfap69
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511829,596,409 - 29,674,545 (+)NCBI
SpeTri2.0NW_0049366213,704,718 - 3,772,298 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CFAP69
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl970,335,206 - 70,430,389 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1970,373,422 - 70,430,383 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2976,943,275 - 76,989,743 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CFAP69
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12158,617,190 - 58,684,179 (-)NCBI
Vero_WHO_p1.0NW_02366604245,541,072 - 45,608,062 (+)NCBI
Cfap69
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248092,916,614 - 2,947,817 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000009297   ⟹   ENSCLAP00000009168
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554327,501,642 - 7,571,373 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000009298   ⟹   ENSCLAP00000009169
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554327,502,587 - 7,569,063 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000009299   ⟹   ENSCLAP00000009170
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554327,536,881 - 7,571,373 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000009300   ⟹   ENSCLAP00000009171
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554327,566,794 - 7,569,063 (+)Ensembl
RefSeq Acc Id: XM_005387987   ⟹   XP_005388044
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554327,501,908 - 7,569,799 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005387988   ⟹   XP_005388045
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554327,501,909 - 7,569,799 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005387990   ⟹   XP_005388047
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554327,532,171 - 7,569,799 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005388044 (Get FASTA)   NCBI Sequence Viewer  
  XP_005388045 (Get FASTA)   NCBI Sequence Viewer  
  XP_005388047 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005388044   ⟸   XM_005387987
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005388045   ⟸   XM_005387988
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005388047   ⟸   XM_005387990
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: ENSCLAP00000009168   ⟸   ENSCLAT00000009297
RefSeq Acc Id: ENSCLAP00000009169   ⟸   ENSCLAT00000009298
RefSeq Acc Id: ENSCLAP00000009170   ⟸   ENSCLAT00000009299
RefSeq Acc Id: ENSCLAP00000009171   ⟸   ENSCLAT00000009300


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000006387 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000009168 ENTREZGENE
Ensembl Transcript ENSCLAT00000009297 ENTREZGENE
NCBI Gene LOC102021036 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-25 Cfap69  cilia and flagella associated protein 69  LOC102021036  chromosome unknown open reading frame, human C7orf63  Symbol and/or name change 5135510 APPROVED