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Gene: Cfap69 (cilia and flagella associated protein 69) Ictidomys tridecemlineatus

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Symbol:

Cfap69

Name:

cilia and flagella associated protein 69

RGD ID:

12718301

Description:

INVOLVED IN flagellated sperm motility (inferred); olfactory behavior (inferred); positive regulation of fertilization (inferred); ASSOCIATED WITH pleomorphic xanthoastrocytoma (ortholog); spermatogenic failure 24 (ortholog); FOUND IN cytoplasm (inferred); non-motile cilium (inferred); sperm midpiece (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

cilia and flagella associated protein 69, transcript variant X1; cilia and flagella associated protein 69, transcript variant X2; cilia- and flagella-associated protein 69

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	29,596,409 - 29,674,545 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936621	3,703,600 - 3,772,019 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936621	3,704,718 - 3,772,298 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cfap69	Squirrel	pleomorphic xanthoastrocytoma		ISO	CFAP69 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Pleomorphic xanthoastrocytoma	ClinVar	PMID:28299358
Cfap69	Squirrel	spermatogenic failure 24		ISO	CFAP69 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:25741868 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cfap69	Squirrel	spermatogenic failure 24		ISO	CFAP69 (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cfap69	Squirrel	flagellated sperm motility	acts_upstream_of_or_within	IEA	UniProtKB:A5D8W1 more ...	150520179		Ensembl	GO_REF:0000107
Cfap69	Squirrel	olfactory behavior	involved_in	IEA	PANTHER:PTN000783591	150520179		TreeGrafter	GO_REF:0000118
Cfap69	Squirrel	olfactory behavior	involved_in	IEA	UniProtKB:Q8BH53 and ensembl:ENSMUSP00000053206	150520179		Ensembl	GO_REF:0000107
Cfap69	Squirrel	positive regulation of fertilization	involved_in	IEA	UniProtKB:Q8BH53 and ensembl:ENSMUSP00000053206	150520179		Ensembl	GO_REF:0000107
Cfap69	Squirrel	positive regulation of flagellated sperm motility	involved_in	IEA	PANTHER:PTN000783591	150520179		TreeGrafter	GO_REF:0000118
Cfap69	Squirrel	positive regulation of flagellated sperm motility	involved_in	IEA	UniProtKB:Q8BH53 and ensembl:ENSMUSP00000053206	150520179		Ensembl	GO_REF:0000107
Cfap69	Squirrel	response to odorant	involved_in	IEA	PANTHER:PTN000783591	150520179		TreeGrafter	GO_REF:0000118
Cfap69	Squirrel	response to odorant	involved_in	IEA	UniProtKB:Q8BH53 and ensembl:ENSMUSP00000053206	150520179		Ensembl	GO_REF:0000107
Cfap69	Squirrel	sperm axoneme assembly	acts_upstream_of_or_within	IEA	UniProtKB:A5D8W1 more ...	150520179		Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cfap69	Squirrel	cytoplasm	located_in	IEA	UniProtKB:A5D8W1 and ensembl:ENSP00000373948	150520179		Ensembl	GO_REF:0000107
Cfap69	Squirrel	non-motile cilium	located_in	IEA	PANTHER:PTN000783591	150520179		TreeGrafter	GO_REF:0000118
Cfap69	Squirrel	non-motile cilium	located_in	IEA	UniProtKB:Q8BH53 and ensembl:ENSMUSP00000053206	150520179		Ensembl	GO_REF:0000107
Cfap69	Squirrel	sperm midpiece	located_in	IEA	PANTHER:PTN000783591	150520179		TreeGrafter	GO_REF:0000118
Cfap69	Squirrel	sperm midpiece	located_in	IEA	UniProtKB:A5D8W1 and ensembl:ENSP00000373948	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cfap69	Squirrel	protein binding	enables	ISO	UniProtKB:G3UZ78	9068941	PMID:36995441	UniProt	PMID:36995441

PMID:30032202

Cfap69
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	29,596,409 - 29,674,545 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936621	3,703,600 - 3,772,019 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936621	3,704,718 - 3,772,298 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CFAP69
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	90,245,174 - 90,323,723 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	90,245,174 - 90,311,063 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	89,874,488 - 89,940,377 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	89,712,461 - 89,777,624 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	7	84,578,592 - 84,644,463 (+)	NCBI		Celera
Cytogenetic Map	7	q21.13	NCBI
HuRef	7	84,484,583 - 84,549,528 (+)	NCBI		HuRef
CHM1_1	7	89,804,453 - 89,870,457 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	91,493,482 - 91,569,216 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	89,205,264 - 89,271,137 (+)	NCBI

Cfap69
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	5,629,284 - 5,714,232 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	5,629,278 - 5,714,239 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	5,579,278 - 5,664,232 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	5,579,278 - 5,664,239 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	5,580,982 - 5,664,232 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	5,586,988 - 5,670,238 (-)	NCBI		MGSCv36	mm8
Celera	5	5,527,663 - 5,605,661 (-)	NCBI		Celera
Cytogenetic Map	5	A1	NCBI
cM Map	5	3.07	NCBI

Cfap69
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	29,334,624 - 29,405,513 (+)	NCBI		GRCr8
mRatBN7.2	4	28,379,604 - 28,452,562 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	28,375,996 - 28,450,698 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	4	25,538,513 - 25,611,470 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	25,538,497 - 25,609,652 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	25,445,683 - 25,518,638 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	25,065,221 - 25,136,471 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	23,824,221 - 23,897,166 (+)	NCBI		Celera
Cytogenetic Map	4	q13	NCBI

Cfap69
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955432	7,501,642 - 7,571,373 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955432	7,501,908 - 7,569,799 (+)	NCBI	ChiLan1.0	ChiLan1.0

CFAP69
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	108,140,930 - 108,246,399 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	156,406,063 - 156,511,038 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	82,254,266 - 82,353,873 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	95,856,393 - 95,936,535 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	95,856,393 - 95,922,012 (+)	Ensembl	panpan1.1		panPan2

CFAP69
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	16,154,334 - 16,209,776 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	16,154,562 - 16,209,858 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	15,724,650 - 15,780,123 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	15,960,297 - 16,015,368 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	15,960,530 - 16,015,450 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	16,120,881 - 16,175,655 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	15,839,436 - 15,894,879 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	16,125,476 - 16,180,557 (+)	NCBI		UU_Cfam_GSD_1.0

CFAP69
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	70,373,527 - 70,430,378 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	70,373,422 - 70,430,383 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	76,943,275 - 76,989,743 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CFAP69
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	58,617,190 - 58,684,179 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666042	45,541,072 - 45,608,062 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cfap69
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624809	2,917,122 - 2,981,123 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624809	2,916,614 - 2,947,817 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005334684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021732786	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040291470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040291471	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040291472	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040291473	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040291475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005736420	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000008200 ⟹ ENSSTOP00000007343

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936621	3,703,600 - 3,772,019 (-)	Ensembl

Ensembl Acc Id:

ENSSTOT00000030313 ⟹ ENSSTOP00000026505

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936621	3,704,826 - 3,772,019 (-)	Ensembl

Ensembl Acc Id:

ENSSTOT00000030711 ⟹ ENSSTOP00000026443

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936621	3,718,893 - 3,772,019 (-)	Ensembl

Ensembl Acc Id:

ENSSTOT00000037603 ⟹ ENSSTOP00000029087

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936621	3,704,826 - 3,706,994 (-)	Ensembl

Ensembl Acc Id:

ENSSTOT00000038126 ⟹ ENSSTOP00000030509

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936621	3,704,826 - 3,731,125 (-)	Ensembl

RefSeq Acc Id:

XM_005334684 ⟹ XP_005334741

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	29,596,415 - 29,664,632 (+)	NCBI
SpeTri2.0	NW_004936621	3,704,718 - 3,772,298 (-)	NCBI

Sequence:

show sequence

CGCCTCCACCTTCGGCCCCACCCCTAGCAACGCTCTGGCTTGTGTTAACAACTGCCTGGCTGGCAGGTGCCTTGCTCCGCTGGCTGGCGGCAGCAGCGCTATGTTGGCAGAGTTGTGGTGGCCAAAGC
CACGGCCAGTCCCTTGGGGCCTCTTGCGACTCTAGCGGCTGTCAGACTGCCTTCCGTATTTCGTGGCGGGAGCTCTCTGGGCCTCGCGACTTCAGGCACAGCGTAGGACCGGAGGACCCCCCACTTAT
CCCCTAGCCCCTTGCTTCTAGCCATGTCCGCAGTGGAGGCCACGGTAACGGCCGAGGCCCAGGAACCCGGCAGCAGAAATAAGTCCATCACTCCTCGCCAAGTTTCGGTGACTGAGGACGAGGAGAAG
CAGGGTGCTTTCAAGCCTATGGACCTTAATCGTGTTATGAAACTCTTGGAAGATAATGATAAAGATGATTTAGAAGAAAAACAACTTAAATCTGTCAAGAAACTGGTGCAGTATTATCAGAATGGACT
TCCCTTAAGGGATTTAGCACAGATATTTAAAATTCTGAATTTGTGTGCAGGAAAAATTGAAAACCAACCCCAATTTATAGAACCTGCATGTGACATATTAAAATTATGTGGCTTGCCATTTTTGAAAA
AGAAAGTATCGGATGAAATAACTTATGCGGAAGATACTGCAATATCAATTGCTCTTCTGGGTGACTTAATGAAAATACCAAGTTCTGAACTGAGGATACAAATTTGTAAGTGTATCGTTGACTTTTAT
CATGCAGAACCAAAGAAGCATATTCCAGGTTACCAGCAAGCCAGTTCATCATACAAGATTAAAATGGCTGAAGTTGGAGGATTGGCAAAAACAATGGTTCAGTCAATGACCTTGCTTGAAAATCAACT
TGTTGAGAAACTTTGGGTCCTTAAAGTTCTGCAGCATCTTTCAACTTCTGAAGTTAATTGTACTTTAATGATGAAAGCACAGGCAGCCAGTGGAATTTGTGTTCACCTCAATGACCCAGATCCCTCTG
GACAGCTTCTATTTCGTTCTTCAGAAATACTTTGGAACTTACTGGAAAAGTCTTCAAAAGAGGAAATCATACAACAGCTTAGTAATTTGGAATGTTTGCTGACTTTGAAAGAAGTATTTAAAAATCTG
TTTACAAGAGGTTTTAGTCATTATGATCGTCAGCTTAGAAATGATATATTAGTGATCACTACAATTATAGCTCAAAACCCTGGAGCACCAATGATTGAATGTGGCTTTACCAGGGACTTGATACTATT
TGCAACCTTTAATGAAGTTAAAAGTCAAAATCCTTTGGTAAAAGGCCTTAAGCTTTCTAATTCCTGTGAAGATTTTGAATTGAAGAAATTGCTATTCAACATAATTGTGATCTTATGTAAAGATTTAC
CTACTGTACAGCTATTAATTGATGGCAAAGTTGTTTTGGCTTTGTTCACCTATATTAAAAAGCCTGAGAAACACAAGATAATTGAATGGTCTGCAGCACAGCATGAAGAGTTACAACTGCATGCAATT
GCCACTTTGTCATCAGTGGCTCCTTTATTAATAGAAGAATACATGTCATGCCAGGGAAATGCTCGAGTACTGGCATTTCTAGAATGGTGTGACAGTGAAGATCCCTTTATTAGTCAAGGTAACAGTTT
TCATGGTGCAGGTGGCCGTGGCAACAAGTTTGCCCAGATGCGTTACAGTTTAAGACTCCTGAGAGCCATGGTCTACCTTGAAGATGAGACTGTGAATACAGATCTTTGTGAAAAGGGAACAATTCAAC
AACTAATAGGAATCTTTAAAAATATTATAAGTAAGACTAATGAAAAGGAAGAGGCCATTATTTTAGAAATTCAGTCTGATATATTACTTATCTTATCTGGACTTTGTGAACACCATATTCAAAGGAAA
GAAATTTTTGGAACTGAAGGAGTAGATATAGTTCTTCATGTAATGAAAACAGACCCCAAGAAGATACAGAGTGGATTAGGCTATAATGTGCTTCTTTTTAGTACATTGGACAGCATTTGGTGCTGCAT
TTTGGGATGTTATTCTTCAGAAGATTACTTTCTTGAAAAGGAAGGTATTTTTCTCCTTTTGGATGTATTGGCATTAAACCAAAAAAAATTTTGTAACCTAATACTTGGAATAATGGTTGAATTTTGTG
ATAATCCCAAAACTTCGGCTCATGTCAATGCTTGGCGAGGGAAGAAGGATCAGACAGCTGCTAGTCTTTTAATTAAATTGTGGAGAAAGGAAGAAAAAGAACTAGGAGTAAAACGAGATAAAAATGGG
AAGATCATTGATACAAAGAAACCTCTATTTACTAGTTTTCAAGAAGAGCAAAAAATCATGCCACTGCCCGCCAACTGCCCATCAGTTGCAGTTATGGATATTGCAGAGAATATCAGAGCAAAAATTTA
TGCTGTGTTGGGCAAACTAGATTTTGAAAATTTACCTGGCCTTTCTGCTGAAGATTTTGTCACTCTCTGTATCATACATAGATACCTTGATTTCAAAATTGGGGAAATATGGAATGAAATATATGAAG
AAATAAAATTAGAAAAGTTAAGACCTGTCACTGCAGATAAAAAAATTTTGGAAGGTATTACAACAGCATCAGAAAATATTGGAAAGATGGTTGTTTCTCTGCAAAATGAGATGATTGAAAGTCAAGCA
CGCCAAGATGCACAAAGTGAACAAAAAGTATATGCAAAAATACAAGCTACACACAAGCAAAGAGACCTAGCTAATAAATCATGGGAAAATTTCCTGGCTAGAACATCAAATGCTAAAACACTAAAGAA
AGCAAAAAGGCTTCAGGAAAAGGCCATAGAATCCTCTAAATACAAAGGGCAACCACAAAACACAATACTTCATCGGACAGTTATTAAAGGCCTTAACACAACGGTGCCCTCTGGTGGGGTAGTAACAG
TGGAAAGCACTCCTGTCCGATTACTTGGAGGACCTCTGGCTGATACAGATTTAGCTCTTAAAAAGCTGCCTATTCGCGGAGGAGCATTGCAGAGGGTGAAAGCAATTAAAATTGGGAATGGGCAAAAC
AAGAGTATTCCTTCCTAACATACTTAAGAGTCTATGAAATAAATTCTGCTTCTAATTTTAGCTAAATATATCTTTATACACAAATGTAAAGCAACTATTTTAGAATAAATATTTTAGTATATTTAT

hide sequence

RefSeq Acc Id:

XM_040291470 ⟹ XP_040147404

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	29,596,411 - 29,674,545 (+)	NCBI

RefSeq Acc Id:

XM_040291471 ⟹ XP_040147405

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	29,596,942 - 29,674,545 (+)	NCBI

RefSeq Acc Id:

XM_040291472 ⟹ XP_040147406

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	29,596,410 - 29,674,545 (+)	NCBI

RefSeq Acc Id:

XM_040291473 ⟹ XP_040147407

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	29,596,413 - 29,664,632 (+)	NCBI

RefSeq Acc Id:

XM_040291475 ⟹ XP_040147409

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	29,612,911 - 29,674,545 (+)	NCBI

RefSeq Acc Id:

XR_005736420

Type:

NON-CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	29,596,409 - 29,661,728 (+)	NCBI


Protein RefSeqs	XP_005334741	(Get FASTA)	NCBI Sequence Viewer
	XP_040147404	(Get FASTA)	NCBI Sequence Viewer
	XP_040147405	(Get FASTA)	NCBI Sequence Viewer
	XP_040147406	(Get FASTA)	NCBI Sequence Viewer
	XP_040147407	(Get FASTA)	NCBI Sequence Viewer
	XP_040147409	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000007343.3
	ENSSTOP00000026443.1
	ENSSTOP00000026505.1
	ENSSTOP00000029087.1
	ENSSTOP00000030509.1
GenBank Protein	KAG3277551	(Get FASTA)	NCBI Sequence Viewer
	KAG3277552	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005334741 ⟸ XM_005334684
- Peptide Label:	isoform X2
- UniProtKB:	I3MB74 (UniProtKB/TrEMBL), A0A287CYU1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSAVEATVTAEAQEPGSRNKSITPRQVSVTEDEEKQGAFKPMDLNRVMKLLEDNDKDDLEEKQLKSVKKLVQYYQNGLPLRDLAQIFKILNLCAGKIENQPQFIEPACDILKLCGLPFLKKKVSDEIT YAEDTAISIALLGDLMKIPSSELRIQICKCIVDFYHAEPKKHIPGYQQASSSYKIKMAEVGGLAKTMVQSMTLLENQLVEKLWVLKVLQHLSTSEVNCTLMMKAQAASGICVHLNDPDPSGQLLFRSS EILWNLLEKSSKEEIIQQLSNLECLLTLKEVFKNLFTRGFSHYDRQLRNDILVITTIIAQNPGAPMIECGFTRDLILFATFNEVKSQNPLVKGLKLSNSCEDFELKKLLFNIIVILCKDLPTVQLLID GKVVLALFTYIKKPEKHKIIEWSAAQHEELQLHAIATLSSVAPLLIEEYMSCQGNARVLAFLEWCDSEDPFISQGNSFHGAGGRGNKFAQMRYSLRLLRAMVYLEDETVNTDLCEKGTIQQLIGIFKN IISKTNEKEEAIILEIQSDILLILSGLCEHHIQRKEIFGTEGVDIVLHVMKTDPKKIQSGLGYNVLLFSTLDSIWCCILGCYSSEDYFLEKEGIFLLLDVLALNQKKFCNLILGIMVEFCDNPKTSAH VNAWRGKKDQTAASLLIKLWRKEEKELGVKRDKNGKIIDTKKPLFTSFQEEQKIMPLPANCPSVAVMDIAENIRAKIYAVLGKLDFENLPGLSAEDFVTLCIIHRYLDFKIGEIWNEIYEEIKLEKLR PVTADKKILEGITTASENIGKMVVSLQNEMIESQARQDAQSEQKVYAKIQATHKQRDLANKSWENFLARTSNAKTLKKAKRLQEKAIESSKYKGQPQNTILHRTVIKGLNTTVPSGGVVTVESTPVRL LGGPLADTDLALKKLPIRGGALQRVKAIKIGNGQNKSIPS hide sequence

RefSeq Acc Id:	XP_040147406 ⟸ XM_040291472
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_040147404 ⟸ XM_040291470
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_040147407 ⟸ XM_040291473
- Peptide Label:	isoform X5
- UniProtKB:	A0A287CYU1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040147405 ⟸ XM_040291471
- Peptide Label:	isoform X3

Protein Domains

Cilia- and flagella-associated protein 69 ARM

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000008182	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000008200.3	UniProtKB/TrEMBL
	ENSSTOT00000030313.1	UniProtKB/TrEMBL
	ENSSTOT00000030711.1	UniProtKB/TrEMBL
	ENSSTOT00000037603.1	UniProtKB/TrEMBL
	ENSSTOT00000038126.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.10.10	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	CFA69	UniProtKB/TrEMBL
	CFA69_ARM_dom	UniProtKB/TrEMBL
NCBI Gene	Cfap69	ENTREZGENE
PANTHER	CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 69	UniProtKB/TrEMBL
	CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 69	UniProtKB/TrEMBL
Pfam	CFA69_ARM_rpt	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48371	UniProtKB/TrEMBL
UniProt	A0A287CYU1	ENTREZGENE, UniProtKB/TrEMBL
	A0A287CYU4_ICTTR	UniProtKB/TrEMBL
	A0A287D676_ICTTR	UniProtKB/TrEMBL
	A0A287DAE7_ICTTR	UniProtKB/TrEMBL
	I3MB74	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

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