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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of smooth muscle cell apoptotic process
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Accession:GO:0034391 term browser browse the term
Definition:Any process that modulates the frequency, rate, or extent of smooth muscle cell apoptotic process.
Synonyms:exact_synonym: regulation of SMC apoptosis
 narrow_synonym: regulation of smooth muscle cell apoptosis


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regulation of smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE1A phosphodiesterase 1A ISO RGD PMID:16514069 RGD:2312521 NCBI chr36:25,250,398...25,591,775
Ensembl chr36:25,256,314...25,578,768 		JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (MGI:5306300|PMID:17098745) UniProt PMID:17098745 MGI:5306300 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279 		JBrowse link
negative regulation of smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOH apolipoprotein H involved_in ISO (PMID:15534879) BHF-UCL PMID:15534879 NCBI chr 9:14,082,648...14,095,186
Ensembl chr 9:14,082,541...14,095,185 		JBrowse link
G ARRB2 arrestin beta 2 ISO RGD PMID:19171933 RGD:5510006 NCBI chr 5:31,831,208...31,838,875
Ensembl chr 5:31,829,864...31,839,454 		JBrowse link
G DIPK2A divergent protein kinase domain 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24269490) Ensembl
MGI		 PMID:24269490 GO_REF:0000107 NCBI chr23:39,472,090...39,496,000 JBrowse link
G EDN1 endothelin 1 ISO RGD PMID:16857764 RGD:4892596 NCBI chr35:11,808,892...11,815,383
Ensembl chr35:11,808,892...11,815,383 		JBrowse link
G ESR1 estrogen receptor 1 involved_in ISO PMID:21808025 UniProt PMID:21808025 RGD:13432273 NCBI chr 1:42,081,952...42,368,544
Ensembl chr 1:42,081,969...42,368,544 		JBrowse link
G GRIA4 glutamate ionotropic receptor AMPA type subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:26,272,008...26,642,819
Ensembl chr 5:26,272,970...26,642,100 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO RGD PMID:21557011 RGD:10045551 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666 		JBrowse link
G IGF1 insulin like growth factor 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794 		JBrowse link
G LRP6 LDL receptor related protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G LYPD3 LY6/PLAUR domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:111,634,910...111,639,250
Ensembl chr 1:111,634,978...111,638,541 		JBrowse link
G MAP2K5 mitogen-activated protein kinase kinase 5 involved_in ISO PMID:20724525 UniProt PMID:20724525 RGD:401901210 NCBI chr30:31,665,032...31,920,792
Ensembl chr30:31,664,564...31,920,751 		JBrowse link
G MAPK7 mitogen-activated protein kinase 7 involved_in ISO PMID:20724525 UniProt PMID:20724525 RGD:401901210 NCBI chr 5:40,831,949...40,836,990
Ensembl chr 5:40,831,947...40,836,505 		JBrowse link
G NR4A3 nuclear receptor subfamily 4 group A member 3 acts_upstream_of_or_within ISO (PMID:19153266) MGI PMID:19153266 NCBI chr11:56,806,506...56,846,997
Ensembl chr11:56,812,804...56,847,689 		JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region ISO RGD PMID:15247148 RGD:2306423 NCBI chr 3:84,060,417...84,286,008
Ensembl chr 3:84,064,440...84,286,360 		JBrowse link
G STUB1 STIP1 homology and U-box containing protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:39,893,492...39,895,385
Ensembl chr 6:39,893,670...39,897,573 		JBrowse link
negative regulation of vascular associated smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFTR CF transmembrane conductance regulator ISO RGD PMID:24999019 RGD:11567225 NCBI chr14:56,290,417...56,452,919
Ensembl chr14:56,290,275...56,453,977 		JBrowse link
G DNMT1 DNA methyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:50,872,213...50,928,352
Ensembl chr20:50,879,527...50,928,029 		JBrowse link
G IGF1 insulin like growth factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794 		JBrowse link
G LOC100688969 glyceraldehyde-3-phosphate dehydrogenase-like ISO RGD PMID:28404743 RGD:13792653 NCBI chr  X:51,925,654...51,926,724 JBrowse link
G MIR17 microRNA mir-17 involved_in ISO (PMID:27640178) BHF-UCL PMID:27640178 NCBI chr22:42,478,013...42,478,071
Ensembl chr22:42,478,000...42,478,083 		JBrowse link
G MIR21 microRNA mir-21 involved_in ISO (PMID:28522568) BHF-UCL PMID:28522568 NCBI chr 9:34,340,550...34,340,609
Ensembl chr 9:34,340,533...34,340,624 		JBrowse link
G SLC7A5 solute carrier family 7 member 5 ISO RGD PMID:29687865 RGD:151357004 NCBI chr 5:65,313,105...65,343,858
Ensembl chr 5:65,313,105...65,343,858 		JBrowse link
positive regulation of smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARRB1 arrestin beta 1 ISO RGD PMID:19171933 RGD:5510006 NCBI chr21:23,261,020...23,304,448
Ensembl chr21:23,235,711...23,297,786 		JBrowse link
G BAG1 BAG cochaperone 1 involved_in ISO PMID:21808025 UniProt PMID:21808025 RGD:13432273 NCBI chr11:50,348,833...50,363,532
Ensembl chr11:50,350,999...50,363,581 		JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A involved_in ISO (MGI:4943829|PMID:20381282) BHF-UCL PMID:20381282 MGI:4943829 NCBI chr11:41,223,316...41,226,056
Ensembl chr11:41,223,315...41,264,379 		JBrowse link
G FOXO1 forkhead box O1 involved_in ISO PMID:19483080 UniProt PMID:19483080 RGD:401901209 NCBI chr25:603,433...706,961
Ensembl chr25:603,543...702,825 		JBrowse link
G IFNG interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:10,406,866...10,411,698
Ensembl chr10:10,406,867...10,411,698 		JBrowse link
G IL12A interleukin 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:26,125,529...26,133,546
Ensembl chr34:26,124,770...26,133,550 		JBrowse link
G IL12B interleukin 12B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:51,178,637...51,194,606
Ensembl chr 4:51,183,568...51,193,228 		JBrowse link
G MIR28 microRNA mir-28 acts_upstream_of ISO (PMID:32151690) ARUK-UCL PMID:32151690 NCBI chr34:20,971,517...20,971,578
Ensembl chr34:20,971,504...20,971,589 		JBrowse link
G PDCD4 programmed cell death 4 ISO RGD PMID:20357187 RGD:9589087 NCBI chr28:22,198,274...22,227,184
Ensembl chr28:22,198,322...22,226,717 		JBrowse link
G STUB1 STIP1 homology and U-box containing protein 1 involved_in ISO PMID:21808025 UniProt PMID:21808025 RGD:13432273 NCBI chr 6:39,893,492...39,895,385
Ensembl chr 6:39,893,670...39,897,573 		JBrowse link
positive regulation of vascular associated smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY10 adenylate cyclase 10 ISO MMO:0000679 RGD PMID:23729662 RGD:329403056 NCBI chr 7:30,576,445...30,660,926
Ensembl chr 7:30,577,591...30,660,926 		JBrowse link
G ATF4 activating transcription factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27812542) Ensembl
MGI		 PMID:27812542 GO_REF:0000107 NCBI chr10:25,528,880...25,531,018
Ensembl chr10:25,528,874...25,530,993 		JBrowse link
G E2F3 E2F transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:19,012,646...19,086,674
Ensembl chr35:19,012,324...19,083,634 		JBrowse link
G GRP gastrin releasing peptide ISO RGD PMID:32192106 RGD:329961569 NCBI chr 1:16,974,818...16,987,578
Ensembl chr 1:16,975,113...16,987,531 		JBrowse link
G MFN2 mitofusin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,284,719...84,310,715
Ensembl chr 2:84,284,719...84,308,225 		JBrowse link
G MIR1-1 microRNA mir-1-1 involved_in ISO (PMID:26166810) BHF-UCL PMID:26166810 NCBI chr24:46,481,078...46,481,136
Ensembl chr24:46,481,078...46,481,136 		JBrowse link
G MIR1-2 microRNA mir-1-2 involved_in ISO (PMID:26166810) BHF-UCL PMID:26166810 NCBI chr 7:66,214,380...66,214,438
Ensembl chr 7:66,214,366...66,214,450 		JBrowse link
G MIR125A microRNA mir-125a ISO RGD PMID:29700287 RGD:26884455 NCBI chr 1:105,400,273...105,400,332
Ensembl chr 1:105,400,270...105,400,337 		JBrowse link
G MIR140 microRNA mir-140 involved_in ISO (PMID:27021683) BHF-UCL PMID:27021683 NCBI chr 5:79,814,256...79,814,316
Ensembl chr 5:79,814,246...79,814,326 		JBrowse link
G MIR24-1 microRNA mir-24-1 involved_in ISO (PMID:23774796) BHF-UCL PMID:23774796 NCBI chr 1:71,677,608...71,677,669
Ensembl chr 1:71,677,608...71,677,669 		JBrowse link
G MIR24-2 microRNA mir-24-2 involved_in ISO (PMID:23774796) BHF-UCL PMID:23774796 NCBI chr20:48,620,684...48,620,745
Ensembl chr20:48,620,674...48,620,745 		JBrowse link
G PDCD4 programmed cell death 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:22,198,274...22,227,184
Ensembl chr28:22,198,322...22,226,717 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (PMID:28522568) BHF-UCL PMID:28522568 NCBI chr20:6,134,618...6,265,481
Ensembl chr20:6,050,357...6,207,981 		JBrowse link
G RBM10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19508861) Ensembl
MGI		 PMID:19508861 GO_REF:0000107 NCBI chr  X:40,746,959...40,776,764
Ensembl chr  X:40,747,178...40,776,742 		JBrowse link
G SOD2 superoxide dismutase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:48,943,472...48,955,158
Ensembl chr 1:48,836,262...48,955,706 		JBrowse link
G STK4 serine/threonine kinase 4 involved_in ISO PMID:23485012 BHF-UCL PMID:23485012 RGD:13506273 NCBI chr24:32,375,630...32,463,848
Ensembl chr24:32,375,189...32,521,042 		JBrowse link
regulation of vascular associated smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RBM10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19508861) Ensembl
MGI		 PMID:19508861 GO_REF:0000107 NCBI chr  X:40,746,959...40,776,764
Ensembl chr  X:40,747,178...40,776,742 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17307
    cellular process 16207
      regulation of cellular process 11187
        regulation of programmed cell death 1700
          regulation of apoptotic process 1641
            regulation of muscle cell apoptotic process 135
              regulation of smooth muscle cell apoptotic process 47
                negative regulation of smooth muscle cell apoptotic process + 21
                positive regulation of smooth muscle cell apoptotic process + 25
                regulation of vascular associated smooth muscle cell apoptotic process + 23
Path 2
Term Annotations click to browse term
  biological_process 17307
    biological regulation 12007
      regulation of biological process 11676
        regulation of cellular process 11187
          regulation of programmed cell death 1700
            regulation of apoptotic process 1641
              regulation of muscle cell apoptotic process 135
                regulation of smooth muscle cell apoptotic process 47
                  negative regulation of smooth muscle cell apoptotic process + 21
                  positive regulation of smooth muscle cell apoptotic process + 25
                  regulation of vascular associated smooth muscle cell apoptotic process + 23
paths to the root