SOD2 (superoxide dismutase 2) - Rat Genome Database

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Gene: SOD2 (superoxide dismutase 2) Canis lupus familiaris
Analyze
Symbol: SOD2
Name: superoxide dismutase 2
RGD ID: 12235905
Description: ENCODES a protein that exhibits DNA binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure (ortholog); apoptotic mitochondrial changes (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN hypertension pathway; ASSOCIATED WITH 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome (ortholog); abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); FOUND IN mitochondrial nucleoid (ortholog); INTERACTS WITH 17beta-hydroxy-5alpha-androstan-3-one; hydrogen peroxide; sodium chloride
Type: protein-coding
RefSeq Status: MODEL
Previously known as: mitochondrial superoxide dismutase 2; superoxide dismutase 2, mitochondrial; Superoxide dismutase [Mn], mitochondrial
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1148,943,472 - 48,955,158 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl148,836,262 - 48,955,706 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha149,785,674 - 49,797,617 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0149,127,570 - 49,139,634 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl149,020,475 - 49,139,710 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1149,010,294 - 49,022,236 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0148,881,250 - 48,893,258 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0149,447,616 - 49,459,607 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome  (ISO)
abdominal aortic aneurysm  (ISO)
Acute Coronary Syndrome  (ISO)
acute kidney tubular necrosis  (ISO)
acute myeloid leukemia  (ISO)
adenocarcinoma  (ISO)
adrenoleukodystrophy  (ISO)
adult respiratory distress syndrome  (ISO)
Albuminuria  (ISO)
Alcoholic Fatty Liver  (ISO)
alcoholic liver cirrhosis  (ISO)
Alcoholic Liver Diseases  (ISO)
Alzheimer's disease  (ISO)
amyotrophic lateral sclerosis  (ISO)
amyotrophic lateral sclerosis type 1  (ISO)
anaplastic thyroid carcinoma  (ISO)
anemia  (ISO)
Aortic Calcification  (ISO)
aortic disease  (ISO)
Arsenic Poisoning  (ISO)
asphyxia neonatorum  (ISO)
asthma  (ISO)
atherosclerosis  (ISO)
autoimmune disease  (ISO)
Bacteremia  (ISO)
bilirubin metabolic disorder  (ISO)
bladder neck obstruction  (ISO)
brain edema  (ISO)
Brain Injuries  (ISO)
brain ischemia  (ISO)
Brain Neoplasms  (ISO)
breast cancer  (ISO)
Breast Neoplasms  (ISO)
Canavan disease  (ISO)
carcinoma  (ISO)
Cardiac Arrhythmias  (ISO)
Cardiogenic Shock  (ISO)
Cardiomegaly  (ISO)
cardiomyopathy  (ISO)
carotid artery disease  (ISO)
central nervous system disease  (ISO)
Central Nervous System Infections  (ISO)
Chemical and Drug Induced Liver Injury  (ISO)
chronic progressive external ophthalmoplegia  (ISO)
Colonic Neoplasms  (ISO)
Colorectal Neoplasms  (ISO)
congenital diaphragmatic hernia  (ISO)
congestive heart failure  (ISO)
cystitis  (ISO)
diabetic angiopathy  (ISO)
Diabetic Nephropathies  (ISO)
diffuse large B-cell lymphoma  (ISO)
dilated cardiomyopathy  (ISO)
disease of cellular proliferation  (ISO)
Disease Progression  (ISO)
Drug-induced Neutropenia  (ISO)
Endotoxemia  (ISO)
Esophageal Neoplasms  (ISO)
Esophageal Stenosis  (ISO)
esophagitis  (ISO)
esophagus adenocarcinoma  (ISO)
esophagus squamous cell carcinoma  (ISO)
exfoliation syndrome  (ISO)
Experimental Diabetes Mellitus  (ISO)
Experimental Mammary Neoplasms  (ISO)
Experimental Radiation Injuries  (ISO)
extrinsic allergic alveolitis  (ISO)
familial adenomatous polyposis  (ISO)
Farber lipogranulomatosis  (ISO)
Fever  (ISO)
Fibrosis  (ISO)
gestational diabetes  (ISO)
head and neck squamous cell carcinoma  (ISO)
Hearing Loss, Noise-Induced  (ISO)
hemolytic anemia  (ISO)
Hemorrhagic Shock  (ISO)
hepatocellular carcinoma  (ISO)
Huntington's disease  (ISO)
hyperhomocysteinemia  (ISO)
Hyperoxia  (ISO)
hypertension  (ISO)
hyperthyroidism  (ISO)
Hypertriglyceridemia  (ISO)
hypoglycemia  (ISO)
Hypopharyngeal Neoplasms  (ISO)
hypothyroidism  (ISO)
Hypoxia  (ISO)
inclusion body myositis  (ISO)
infectious mononucleosis  (ISO)
Insulin Resistance  (ISO)
interstitial lung disease  (ISO)
intestinal disease  (ISO)
invasive ductal carcinoma  (ISO)
ischemia  (ISO)
kidney disease  (ISO)
Kidney Neoplasms  (ISO)
Kuhnt-Junius degeneration  (ISO)
Leber hereditary optic neuropathy  (ISO)
Leigh disease  (ISO)
Lewy body dementia  (ISO)
liver cirrhosis  (ISO)
lung adenocarcinoma  (ISO)
lung cancer  (ISO)
lung disease  (ISO)
lung non-small cell carcinoma  (ISO)
Lymphatic Metastasis  (ISO)
macular degeneration  (ISO)
major depressive disorder  (ISO)
male infertility  (ISO)
malignant mesothelioma  (ISO)
Marfan syndrome  (ISO)
melanoma  (ISO)
MELAS syndrome  (ISO)
Mesothelioma  (ISO)
metabolic dysfunction-associated steatohepatitis  (ISO)
metabolic dysfunction-associated steatotic liver disease  (ISO)
Metabolic Syndrome  (ISO)
methylmalonic acidemia  (ISO)
middle cerebral artery infarction  (ISO)
mitochondrial metabolism disease  (ISO)
Mouth Neoplasms  (ISO)
multiple chemical sensitivity  (ISO)
multiple myeloma  (ISO)
mycosis fungoides  (ISO)
myelomeningocele  (ISO)
myocardial infarction  (ISO)
Myocardial Ischemia  (ISO)
Myocardial Reperfusion Injury  (ISO)
Nasal Polyps  (ISO)
Necrosis  (ISO)
Neoplasm Invasiveness  (ISO)
Neoplasm Metastasis  (ISO)
Neoplastic Cell Transformation  (ISO)
nephrotic syndrome  (ISO)
Nerve Degeneration  (ISO)
neurodegenerative disease  (ISO)
neuronal ceroid lipofuscinosis  (ISO)
obesity  (ISO)
optic neuritis  (ISO)
osteoarthritis  (ISO)
osteoporosis  (ISO)
ovarian cancer  (ISO)
Ovarian Neoplasms  (ISO)
pancreatic cancer  (ISO)
papilloma  (ISO)
Parkinson's disease  (ISO)
perinatal necrotizing enterocolitis  (ISO)
peripheral nervous system disease  (ISO)
polyneuropathy  (ISO)
pre-malignant neoplasm  (ISO)
Premature Birth  (ISO)
Presbycusis  (ISO)
primary biliary cholangitis  (ISO)
primary ciliary dyskinesia 32  (ISO)
primary open angle glaucoma  (ISO)
Prostatic Neoplasms  (ISO)
pseudoxanthoma elasticum  (ISO)
psoriasis  (ISO)
Pulmonary Arterial Hypertension  (ISO)
pulmonary hypertension  (ISO)
Radiation Injuries  (ISO)
reactive arthritis  (ISO)
renal cell carcinoma  (ISO)
renal fibrosis  (ISO)
Reperfusion Injury  (ISO)
Respiratory Tract Granuloma  (ISO)
Reticulocytosis  (ISO)
Retina Reperfusion Injury  (ISO)
retinitis pigmentosa  (ISO)
rheumatoid arthritis  (ISO)
sarcoidosis  (ISO)
Sengers syndrome  (ISO)
sensorineural hearing loss  (ISO)
Sepsis  (ISO)
sideroblastic anemia  (ISO)
Skin Abnormalities  (ISO)
skin disease  (ISO)
Skin Neoplasms  (ISO)
squamous cell carcinoma  (ISO)
status epilepticus  (ISO)
steatotic liver disease  (ISO)
stomach cancer  (ISO)
Stomach Neoplasms  (ISO)
substance-induced psychosis  (ISO)
systemic lupus erythematosus  (ISO)
Tardive Dyskinesia  (ISO)
Thyroid Neoplasms  (ISO)
Tongue Neoplasms  (ISO)
transient cerebral ischemia  (ISO)
Turner syndrome  (ISO)
type 1 diabetes mellitus  (ISO)
type 2 diabetes mellitus  (ISO)
urinary bladder cancer  (ISO)
urticaria  (ISO)
uveitis  (ISO)
vascular disease  (ISO)
Ventricular Dysfunction, Left  (ISO)
vitiligo  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure  (ISO)
apoptotic mitochondrial changes  (ISO)
cellular response to ethanol  (ISO)
cellular response to oxidative stress  (IEA)
detection of oxygen  (ISO)
erythrophore differentiation  (ISO)
glutathione metabolic process  (ISO)
heart development  (ISO)
hemopoiesis  (ISO)
hydrogen peroxide biosynthetic process  (ISO)
hydrogen peroxide metabolic process  (ISO)
intracellular oxygen homeostasis  (IEA)
intrinsic apoptotic signaling pathway in response to DNA damage  (ISO)
intrinsic apoptotic signaling pathway in response to oxidative stress  (ISO)
liver development  (ISO)
locomotory behavior  (ISO)
mitochondrion organization  (ISO)
multicellular organismal-level iron ion homeostasis  (ISO)
negative regulation of apoptotic process  (ISO)
negative regulation of cell population proliferation  (IEA)
negative regulation of fat cell differentiation  (ISO)
negative regulation of fibroblast proliferation  (ISO)
negative regulation of membrane hyperpolarization  (ISO)
negative regulation of neuron apoptotic process  (IEA)
negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway  (IEA)
negative regulation of vascular associated smooth muscle cell proliferation  (IEA)
neuron development  (ISO)
positive regulation of cell migration  (IEA)
positive regulation of hydrogen peroxide biosynthetic process  (ISO)
positive regulation of nitric oxide biosynthetic process  (ISO)
positive regulation of vascular associated smooth muscle cell apoptotic process  (IEA)
positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching  (IEA)
post-embryonic development  (ISO)
protein homotetramerization  (IEA)
reactive oxygen species metabolic process  (IEA)
regulation of blood pressure  (ISO)
regulation of mitochondrial membrane potential  (ISO)
regulation of transcription by RNA polymerase II  (IEA,ISO)
release of cytochrome c from mitochondria  (ISO)
removal of superoxide radicals  (IEA,ISO)
respiratory electron transport chain  (ISO)
response to activity  (ISO)
response to axon injury  (ISO)
response to cadmium ion  (ISO)
response to electrical stimulus  (ISO)
response to gamma radiation  (ISO)
response to hydrogen peroxide  (ISO)
response to hyperoxia  (ISO)
response to hypoxia  (ISO)
response to immobilization stress  (ISO)
response to isolation stress  (ISO)
response to L-ascorbic acid  (ISO)
response to lipopolysaccharide  (ISO)
response to magnetism  (ISO)
response to manganese ion  (ISO)
response to nutrient levels  (ISO)
response to oxidative stress  (ISO)
response to reactive oxygen species  (ISO)
response to selenium ion  (ISO)
response to silicon dioxide  (ISO)
response to superoxide  (IEA,ISO)
response to xenobiotic stimulus  (ISO)
response to zinc ion  (ISO)
sensory perception of sound  (ISO)
superoxide anion generation  (ISO)
superoxide metabolic process  (IEA,ISO)
vasodilation  (ISO)

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
SOD2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1148,943,472 - 48,955,158 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl148,836,262 - 48,955,706 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha149,785,674 - 49,797,617 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0149,127,570 - 49,139,634 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl149,020,475 - 49,139,710 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1149,010,294 - 49,022,236 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0148,881,250 - 48,893,258 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0149,447,616 - 49,459,607 (-)NCBIUU_Cfam_GSD_1.0
SOD2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386159,669,069 - 159,762,281 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6159,669,069 - 159,762,529 (-)EnsemblGRCh38hg38GRCh38
GRCh376160,090,101 - 160,183,313 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366160,020,138 - 160,034,343 (-)NCBINCBI36Build 36hg18NCBI36
Build 346160,073,582 - 160,084,614NCBI
Celera6160,747,601 - 160,761,803 (-)NCBICelera
Cytogenetic Map6q25.3NCBI
HuRef6157,570,584 - 157,584,704 (-)NCBIHuRef
CHM1_16160,363,031 - 160,377,215 (-)NCBICHM1_1
T2T-CHM13v2.06160,914,924 - 161,007,912 (-)NCBIT2T-CHM13v2.0
Sod2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391713,226,726 - 13,237,006 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1713,225,733 - 13,258,950 (+)EnsemblGRCm39 Ensembl
GRCm381713,007,839 - 13,018,119 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1713,006,846 - 13,040,063 (+)EnsemblGRCm38mm10GRCm38
MGSCv371713,200,705 - 13,210,985 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361712,850,771 - 12,861,051 (+)NCBIMGSCv36mm8
Celera1713,040,822 - 13,051,101 (+)NCBICelera
Cytogenetic Map17A1NCBI
cM Map178.75NCBI
Sod2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8150,043,323 - 50,050,168 (-)NCBIGRCr8
mRatBN7.2147,638,318 - 47,645,163 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl147,636,528 - 47,645,189 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx148,187,171 - 48,194,016 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0154,175,067 - 54,181,918 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0148,262,686 - 48,269,531 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0147,914,757 - 47,921,587 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl147,914,759 - 47,921,587 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0151,827,380 - 51,834,232 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4141,862,997 - 41,870,327 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1141,865,943 - 41,873,272 (-)NCBI
Celera143,323,111 - 43,329,909 (-)NCBICelera
Cytogenetic Map1q11NCBI
Sod2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543921,209,101 - 21,224,163 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543921,209,101 - 21,223,538 (+)NCBIChiLan1.0ChiLan1.0
SOD2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25179,778,227 - 179,792,471 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16177,683,324 - 177,697,556 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06157,562,814 - 157,610,155 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16162,576,082 - 162,589,960 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6162,576,082 - 162,589,960 (-)Ensemblpanpan1.1panPan2
Sod2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946143,926,345 - 143,939,641 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648911,178,015 - 11,191,781 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648911,178,338 - 11,191,601 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SOD2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl17,679,352 - 7,689,560 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.117,679,352 - 7,689,564 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.219,475,310 - 9,485,526 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SOD2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11387,284,537 - 87,297,998 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1387,280,686 - 87,297,974 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604059,683,827 - 59,727,382 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sod2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248553,260,809 - 3,271,367 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248553,260,800 - 3,271,864 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SOD2
144 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 22 6 6 6 6 6 12 8 10 6
Low
Below cutoff

Sequence


Ensembl Acc Id: ENSCAFT00000001037   ⟹   ENSCAFP00000000951
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl148,946,098 - 48,955,706 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000060333   ⟹   ENSCAFP00000047601
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl148,945,905 - 48,955,706 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000062454   ⟹   ENSCAFP00000047161
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl148,836,262 - 48,955,706 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000062492   ⟹   ENSCAFP00000060169
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl148,944,319 - 48,955,706 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000063650   ⟹   ENSCAFP00000043620
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl148,921,077 - 48,955,706 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000063842   ⟹   ENSCAFP00000051366
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl148,885,595 - 48,955,326 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000065947   ⟹   ENSCAFP00000046194
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl148,946,340 - 48,955,109 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845003067   ⟹   ENSCAFP00845002448
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl149,020,475 - 49,139,710 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845003078   ⟹   ENSCAFP00845002459
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl149,054,319 - 49,139,710 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845003091   ⟹   ENSCAFP00845002466
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl149,101,816 - 49,139,710 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845003108   ⟹   ENSCAFP00845002479
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl149,101,816 - 49,139,425 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845003115   ⟹   ENSCAFP00845002484
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl149,128,612 - 49,139,710 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845003130   ⟹   ENSCAFP00845002494
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl149,130,440 - 49,139,435 (-)Ensembl
RefSeq Acc Id: XM_038465802   ⟹   XP_038321730
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1149,010,294 - 49,022,236 (-)NCBI
RefSeq Acc Id: XM_038526471   ⟹   XP_038382399
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0149,447,616 - 49,459,607 (-)NCBI
RefSeq Acc Id: XM_038590769   ⟹   XP_038446697
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0148,881,250 - 48,893,258 (-)NCBI
RefSeq Acc Id: XM_038654563   ⟹   XP_038510491
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0149,127,570 - 49,139,634 (-)NCBI
RefSeq Acc Id: XM_533463   ⟹   XP_533463
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1148,943,472 - 48,955,158 (-)NCBI
Dog10K_Boxer_Tasha149,785,674 - 49,797,617 (-)NCBI
Sequence:
RefSeq Acc Id: XP_533463   ⟸   XM_533463
- UniProtKB: A0A346M2B1 (UniProtKB/TrEMBL),   A0A8C0KZ45 (UniProtKB/TrEMBL),   A0A8C0NE68 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000000951   ⟸   ENSCAFT00000001037
Ensembl Acc Id: ENSCAFP00000047601   ⟸   ENSCAFT00000060333
Ensembl Acc Id: ENSCAFP00000051366   ⟸   ENSCAFT00000063842
Ensembl Acc Id: ENSCAFP00000043620   ⟸   ENSCAFT00000063650
Ensembl Acc Id: ENSCAFP00000047161   ⟸   ENSCAFT00000062454
Ensembl Acc Id: ENSCAFP00000060169   ⟸   ENSCAFT00000062492
Ensembl Acc Id: ENSCAFP00000046194   ⟸   ENSCAFT00000065947
RefSeq Acc Id: XP_038321730   ⟸   XM_038465802
RefSeq Acc Id: XP_038446697   ⟸   XM_038590769
RefSeq Acc Id: XP_038510491   ⟸   XM_038654563
- UniProtKB: A0A346M2B1 (UniProtKB/TrEMBL),   A0A8C0KZ45 (UniProtKB/TrEMBL),   A0A8C0NE68 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038382399   ⟸   XM_038526471
- UniProtKB: A0A346M2B1 (UniProtKB/TrEMBL),   A0A8C0KZ45 (UniProtKB/TrEMBL),   A0A8C0NE68 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845002448   ⟸   ENSCAFT00845003067
Ensembl Acc Id: ENSCAFP00845002484   ⟸   ENSCAFT00845003115
Ensembl Acc Id: ENSCAFP00845002494   ⟸   ENSCAFT00845003130
Ensembl Acc Id: ENSCAFP00845002466   ⟸   ENSCAFT00845003091
Ensembl Acc Id: ENSCAFP00845002479   ⟸   ENSCAFT00845003108
Ensembl Acc Id: ENSCAFP00845002459   ⟸   ENSCAFT00845003078
Protein Domains
Manganese/iron superoxide dismutase C-terminal   Manganese/iron superoxide dismutase N-terminal


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000000671 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030013777 UniProtKB/TrEMBL
  ENSCAFG00040022824 UniProtKB/TrEMBL
  ENSCAFG00845001754 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000062454.2 UniProtKB/TrEMBL
  ENSCAFT00000063842.2 UniProtKB/TrEMBL
  ENSCAFT00000065947.2 UniProtKB/TrEMBL
  ENSCAFT00000096308.1 UniProtKB/TrEMBL
  ENSCAFT00000109268.1 UniProtKB/TrEMBL
  ENSCAFT00000109477.1 UniProtKB/TrEMBL
  ENSCAFT00030025482.1 UniProtKB/TrEMBL
  ENSCAFT00030025721.1 UniProtKB/TrEMBL
  ENSCAFT00030025847.1 UniProtKB/TrEMBL
  ENSCAFT00040042464.1 UniProtKB/TrEMBL
  ENSCAFT00040042532.1 UniProtKB/TrEMBL
  ENSCAFT00845003067.1 UniProtKB/TrEMBL
  ENSCAFT00845003078.1 UniProtKB/TrEMBL
  ENSCAFT00845003091.1 UniProtKB/TrEMBL
  ENSCAFT00845003108 ENTREZGENE
  ENSCAFT00845003108.1 UniProtKB/TrEMBL
  ENSCAFT00845003115.1 UniProtKB/TrEMBL
  ENSCAFT00845003130.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.990 UniProtKB/TrEMBL
  3.55.40.20 UniProtKB/TrEMBL
InterPro Mn/Fe_SOD UniProtKB/TrEMBL
  Mn/Fe_SOD_BS UniProtKB/TrEMBL
  Mn/Fe_SOD_C UniProtKB/TrEMBL
  Mn/Fe_SOD_N UniProtKB/TrEMBL
  Mn/Fe_SOD_N_sf UniProtKB/TrEMBL
  SOD_C_sf UniProtKB/TrEMBL
KEGG Report cfa:476258 UniProtKB/TrEMBL
NCBI Gene SOD2 ENTREZGENE
PANTHER SUPEROXIDE DISMUTASE 2 UniProtKB/TrEMBL
  SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL UniProtKB/TrEMBL
Pfam Sod_Fe_C UniProtKB/TrEMBL
  Sod_Fe_N UniProtKB/TrEMBL
PIRSF SODismutase UniProtKB/TrEMBL
PRINTS MNSODISMTASE UniProtKB/TrEMBL
PROSITE SOD_MN UniProtKB/TrEMBL
Superfamily-SCOP SSF46609 UniProtKB/TrEMBL
  SSF54719 UniProtKB/TrEMBL
UniProt A0A346M2B1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0KZ45 ENTREZGENE
  A0A8C0NBS2_CANLF UniProtKB/TrEMBL
  A0A8C0NCH5_CANLF UniProtKB/TrEMBL
  A0A8C0NE68 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MIR0_CANLF UniProtKB/TrEMBL
  A0A8I3MIS4_CANLF UniProtKB/TrEMBL
  A0A8I3MJZ1_CANLF UniProtKB/TrEMBL
  A0A8I3MMB3_CANLF UniProtKB/TrEMBL
  A0A8I3MMC9_CANLF UniProtKB/TrEMBL
  A0A8I3RRQ1_CANLF UniProtKB/TrEMBL
  A0A8P0NX89_CANLF UniProtKB/TrEMBL
  A0A8P0PMK7_CANLF UniProtKB/TrEMBL
  A0A8P0PRJ0_CANLF UniProtKB/TrEMBL
  A0A8P0TQ71_CANLF UniProtKB/TrEMBL
  P54712 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary A0A8P0T422 UniProtKB/TrEMBL
VGNC ID VGNC:53988 ENTREZGENE