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ONTOLOGY REPORT - ANNOTATIONS

Term:high-density lipoprotein particle remodeling
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Accession:GO:0034375 term browser browse the term
Definition:The acquisition, loss or modification of a protein or lipid within a high-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters from LDL to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride to LDL.
Synonyms:exact_synonym: HDL remodeling;   HDL remodelling;   high-density lipoprotein particle remodelling


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high-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca5 ATP binding cassette subfamily A member 5 involved_in ISO (MGI:4454250|PMID:20382126) RGD PMID:20382126 MGI:4454250 NCBI chr10:95,240,159...95,309,195
Ensembl chr10:95,240,154...95,308,976 		JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (MGI:3852307|PMID:16556852), (MGI:5634884|PMID:21481393) RGD PMID:16556852 PMID:21481393 MGI:3852307 MGI:5634884 NCBI chr20:9,126,687...9,182,948
Ensembl chr20:9,126,687...9,182,948 		JBrowse link
G Apoa1 apolipoprotein A1 involved_in ISO
IEA		 (PMID:21481393), (PMID:4335615)
GO_REF:0000107		 RGD
Ensembl		 PMID:4335615 PMID:21481393 GO_REF:0000107 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035 		JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:14967812), (PMID:8106353) RGD PMID:8106353 PMID:14967812 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355 		JBrowse link
G Apoa4 apolipoprotein A4 involved_in ISO
IEA		 (PMID:1935934)
GO_REF:0000107		 RGD
Ensembl		 PMID:1935934 GO_REF:0000107 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469 		JBrowse link
G Apoc3 apolipoprotein C3 involved_in ISO (PMID:17438339) RGD PMID:17438339 NCBI chr 8:46,531,478...46,533,658
Ensembl chr 8:46,531,478...46,533,583 		JBrowse link
G Apoe apolipoprotein E involved_in ISO
IEA		 UniProtKB:P08226 (PMID:12401887)
GO_REF:0000107		 RGD
Ensembl		 PMID:12401887 GO_REF:0000107 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G Apom apolipoprotein M involved_in ISO
IEA
IBA		 (PMID:18006500)
(MGI:3575626|PMID:15793583)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:15793583 PMID:18006500 GO_REF:0000033 GO_REF:0000107 MGI:3575626 NCBI chr20:3,690,950...3,693,550
Ensembl chr20:3,688,413...3,693,550 		JBrowse link
G Lcat lecithin cholesterol acyltransferase involved_in ISO
IEA		 (PMID:10722751), (PMID:12167653), (PMID:15210842), (PMID:4335615)
GO_REF:0000107		 RGD
Ensembl		 PMID:4335615 PMID:10722751 PMID:12167653 PMID:15210842 GO_REF:0000107 NCBI chr19:33,834,748...33,838,214
Ensembl chr19:33,834,403...33,838,231 		JBrowse link
G Lipc lipase C, hepatic type involved_in IDA
ISO
IEA
IBA		 (PMID:3244012)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:3244012 PMID:8157689 GO_REF:0000033 GO_REF:0000107, RGD:2308770 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464 		JBrowse link
G Lipg lipase G, endothelial type involved_in ISO
IBA		 (PMID:19136670)
GO_REF:0000033		 RGD
GO_Central		 PMID:19136670 GO_REF:0000033 NCBI chr18:68,514,923...68,536,105
Ensembl chr18:68,514,923...68,536,260 		JBrowse link
G Lpl lipoprotein lipase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:20,830,055...20,853,855
Ensembl chr16:20,829,465...20,855,249 		JBrowse link
G Pla2g3 phospholipase A2, group III involved_in ISO (PMID:18801741) RGD PMID:18801741 NCBI chr14:78,367,625...78,373,913
Ensembl chr14:78,368,105...78,373,913 		JBrowse link
G Pltp phospholipid transfer protein involved_in ISO
IBA		 (PMID:24369175), (PMID:29883800), (PMID:9132017)
GO_REF:0000033		 RGD
GO_Central		 PMID:9132017 PMID:24369175 PMID:29883800 GO_REF:0000033 NCBI chr 3:153,574,825...153,592,647
Ensembl chr 3:153,574,825...153,592,647 		JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO
IEA		 (MGI:3056693|PMID:15210842), (MGI:5634884|PMID:21481393)
GO_REF:0000107		 RGD
Ensembl		 PMID:15210842 PMID:21481393 GO_REF:0000107 MGI:3056693 MGI:5634884 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    multicellular organismal process 8810
      plasma lipoprotein particle organization 42
        plasma lipoprotein particle remodeling 27
          high-density lipoprotein particle remodeling 15
            conversion of discoidal high-density lipoprotein particle to spherical high-density lipoprotein particle 0
Path 2
Term Annotations click to browse term
  biological_process 19692
    cellular process 18195
      cellular component organization or biogenesis 6958
        cellular component organization 6699
          protein-containing complex organization 2392
            protein-containing complex remodeling 30
              protein-lipid complex remodeling 27
                plasma lipoprotein particle remodeling 27
                  high-density lipoprotein particle remodeling 15
                    conversion of discoidal high-density lipoprotein particle to spherical high-density lipoprotein particle 0
paths to the root