Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:nuclear outer membrane
go back to main search page
Accession:GO:0005640 term browser browse the term
Definition:The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes.
Synonyms:exact_synonym: nucleus outer envelope;   perinuclear membrane
 xref: NIF_Subcellular:sao1617136075


show annotations for term's descendants           Sort by:
nuclear outer membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07006740.1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 Ensembl chr 1:230,295,276...230,295,656 JBrowse link
G AABR07018058.1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 Ensembl chr15:31,592,001...31,592,384 JBrowse link
G Bok BCL2 family apoptosis regulator BOK located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:94,223,493...94,234,476
Ensembl chr 9:94,223,389...94,234,476 		JBrowse link
G Clmn calmin is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:123,707,710...123,807,283
Ensembl chr 6:123,713,507...123,807,272 		JBrowse link
G Cptp ceramide-1-phosphate transfer protein located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:166,474,947...166,479,103
Ensembl chr 5:166,474,966...166,479,017 		JBrowse link
G Dhcr7 7-dehydrocholesterol reductase located_in ISO
IEA		 (PMID:9878250)
GO_REF:0000107		 RGD
Ensembl		 PMID:9878250 GO_REF:0000107 NCBI chr 1:199,015,081...199,031,055
Ensembl chr 1:199,015,081...199,031,055 		JBrowse link
G Emd emerin located_in ISO
IEA		 (PMID:17785515)
GO_REF:0000107		 RGD
Ensembl		 PMID:17785515 GO_REF:0000107 NCBI chr  X:152,038,990...152,042,190
Ensembl chr  X:152,038,998...152,045,807 		JBrowse link
G Eno1 enolase 1 located_in ISO (PMID:11134351) RGD PMID:11134351 NCBI chr 5:160,719,951...160,731,337
Ensembl chr 5:160,719,951...160,731,336
Ensembl chr 3:160,719,951...160,731,336 		JBrowse link
G ENSRNOG00000064148 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 Ensembl chr 1:14,137,492...14,138,351 JBrowse link
G Ghrhr growth hormone releasing hormone receptor located_in ISO
IEA		 (PMID:10461027)
GO_REF:0000107		 RGD
Ensembl		 PMID:10461027 GO_REF:0000107 NCBI chr 4:84,498,159...84,532,851
Ensembl chr 4:84,500,212...84,532,776 		JBrowse link
G Itpr3 inositol 1,4,5-trisphosphate receptor, type 3 IDA RGD PMID:8388391 RGD:729040 NCBI chr20:5,136,968...5,202,339
Ensembl chr20:5,136,441...5,202,337 		JBrowse link
G Itprip inositol 1,4,5-trisphosphate receptor interacting protein located_in ISO (PMID:31142202) RGD PMID:31142202 NCBI chr 1:246,762,804...246,786,379
Ensembl chr 1:246,762,472...246,786,408 		JBrowse link
G Kash5 KASH domain containing 5 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:24062341)		 GO_Central
RGD		 PMID:24062341 GO_REF:0000033 NCBI chr 1:95,668,918...95,691,353
Ensembl chr 1:95,668,886...95,691,368 		JBrowse link
G Lrpprc leucine-rich pentatricopeptide repeat containing located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 6:9,859,816...9,942,294
Ensembl chr 6:9,859,867...9,942,293 		JBrowse link
G Ltc4s leukotriene C4 synthase located_in ISO
ISS
IEA		 (PMID:12023288)
GO_REF:0000024
GO_REF:0000044		 RGD
UniProt		 PMID:12023288 GO_REF:0000024 GO_REF:0000044 NCBI chr10:34,560,476...34,562,790
Ensembl chr10:34,560,360...34,562,651 		JBrowse link
G Nucb2 nucleobindin 2 located_in ISO (PMID:10915798) RGD PMID:10915798 NCBI chr 1:170,750,830...170,787,356
Ensembl chr 1:170,750,877...170,787,353 		JBrowse link
G Nutf2 nuclear transport factor 2 located_in IDA
IEA		 GO_REF:0000044 UniProt
RGD		 PMID:10543952 GO_REF:0000044, RGD:9831376 NCBI chr19:33,752,319...33,773,595
Ensembl chr19:33,752,291...33,773,591 		JBrowse link
G Nutf2l1 nuclear transport factor 2 like 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:11,960,791...11,962,329 JBrowse link
G Psen1 presenilin 1 located_in ISO (PMID:9246482) RGD PMID:9246482 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 located_in ISO
ISS		 (PMID:9545330)
GO_REF:0000024		 RGD
UniProt		 PMID:9545330 GO_REF:0000024 NCBI chr13:62,163,936...62,172,193
Ensembl chr13:62,163,932...62,172,188 		JBrowse link
G Retsat retinol saturase located_in IEA
ISS
ISO		 GO_REF:0000107
PMID:15358783
(PMID:15358783)		 Ensembl
RGD		 PMID:15358783 PMID:15358783 GO_REF:0000107, RGD:8553455 NCBI chr 4:104,653,306...104,662,069
Ensembl chr 4:104,653,155...104,668,310 		JBrowse link
G Sigmar1 sigma non-opioid intracellular receptor 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:56,904,155...56,907,012
Ensembl chr 5:56,904,159...56,907,017 		JBrowse link
G Slc22a3 solute carrier family 22 member 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:48,235,476...48,324,617
Ensembl chr 1:48,235,476...48,324,612 		JBrowse link
G Smpd4 sphingomyelin phosphodiesterase 4 located_in ISO (PMID:31495489) RGD PMID:31495489 NCBI chr11:83,362,534...83,386,257
Ensembl chr11:83,362,534...83,386,250 		JBrowse link
G Snca synuclein alpha IDA RGD PMID:11810180 RGD:6218996 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262 		JBrowse link
G Syne1 spectrin repeat containing nuclear envelope protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:41,512,146...41,983,382
Ensembl chr 1:41,512,030...41,983,322 		JBrowse link
G Syne3 spectrin repeat containing, nuclear envelope family member 3 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:18396275)		 GO_Central
RGD		 PMID:18396275 GO_REF:0000033 NCBI chr 6:123,872,895...123,964,773
Ensembl chr 6:123,873,174...123,953,409 		JBrowse link
G Syne4 spectrin repeat containing nuclear envelope family member 4 located_in
is_active_in		 ISS
IBA
ISO
IEA		 GO_REF:0000024
GO_REF:0000033
(PMID:19164528)
GO_REF:0000044		 UniProt
GO_Central
RGD		 PMID:19164528 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 NCBI chr 1:85,569,409...85,573,775
Ensembl chr 1:85,569,545...85,573,760 		JBrowse link
G Tmem109 transmembrane protein 109 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:207,519,628...207,530,245
Ensembl chr 1:207,519,624...207,530,215 		JBrowse link
G Tmem53 transmembrane protein 53 located_in ISO (PMID:20091084) RGD PMID:20091084 NCBI chr 5:130,721,780...130,737,692
Ensembl chr 5:130,721,659...130,737,692 		JBrowse link
G Trappc2 trafficking protein particle complex subunit 2 located_in ISO (PMID:11134351) RGD PMID:11134351 NCBI chr  X:28,004,051...28,015,336
Ensembl chr  X:27,994,054...28,015,346 		JBrowse link
G Ugt2b34l1 UDP glucuronosyltransferase 2 family, polypeptide B34 like 1 located_in ISO (PMID:11300766) RGD PMID:11300766 NCBI chr14:21,146,140...21,167,706
Ensembl chr14:21,145,827...21,167,704 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20969
    cellular anatomical structure 20768
      endomembrane system 4352
        nuclear outer membrane-endoplasmic reticulum membrane network 1135
          nuclear outer membrane 32
            extrinsic component of nuclear outer membrane 0
Path 2
Term Annotations click to browse term
  cellular_component 20969
    cellular anatomical structure 20768
      organelle 14065
        membrane-bounded organelle 12645
          intracellular membrane-bounded organelle 12095
            nucleus 7521
              nuclear envelope 482
                nuclear membrane 294
                  nuclear outer membrane 32
                    extrinsic component of nuclear outer membrane 0
paths to the root