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6beta-hydroxy steroid - Ontology Report - Rat Genome Database

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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:6beta-hydroxy steroid
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Accession:CHEBI:36851 term browser browse the term
Definition:Any 6-hydroxy steroid in which the 6-hydroxy substituent has beta-configuration.
Synonyms:related_synonym: 6beta-hydroxy steroids


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6beta-hydroxycortisol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp3a2 cytochrome P450, family 3, subfamily a, polypeptide 2 affects chemical synthesis ISO CYP3A4 protein affects the chemical synthesis of 6 beta-hydroxycortisol CTD PMID:15941677 NCBI chr12:14,321,771...14,343,886
Ensembl chr12:9,015,383...9,285,008
JBrowse link
6beta-hydroxytestosterone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc1 ATP binding cassette subfamily C member 1 multiple interactions ISO [[ABCC1 gene mutant form results in increased susceptibility to Testosterone deficiency] which results in decreased hydroxylation of Testosterone] which results in decreased chemical synthesis of 6 beta-hydroxytestosterone CTD PMID:22522787 NCBI chr10:1,022,041...1,162,431
Ensembl chr10:531,812...655,114
JBrowse link
G Cyp3a2 cytochrome P450, family 3, subfamily a, polypeptide 2 increases chemical synthesis
multiple interactions
EXP
ISO
CYP3A4 protein results in increased chemical synthesis of 6 beta-hydroxytestosterone
[CYP3A4 protein results in increased metabolism of Testosterone] which results in increased chemical synthesis of 6 beta-hydroxytestosterone; isobavachalcone inhibits the reaction [[CYP3A4 protein results in increased metabolism of Testosterone] which results in increased chemical synthesis of 6 beta-hydroxytestosterone]
[[CYP3A4 protein co-treated with NADP] results in increased oxidation of Testosterone] which results in increased chemical synthesis of 6 beta-hydroxytestosterone; [CYP3A4 mRNA results in increased metabolism of Testosterone] which results in increased chemical synthesis of 6 beta-hydroxytestosterone; [CYP3A4 protein results in increased hydroxylation of Testosterone] which results in increased chemical synthesis of 6 beta-hydroxytestosterone; [CYP3A4 protein results in increased metabolism of Testosterone] which results in increased chemical synthesis of 6 beta-hydroxytestosterone; [Meclizine results in decreased activity of CYP3A4 protein] which results in decreased chemical synthesis of 6 beta-hydroxytestosterone; erdafitinib inhibits the reaction [[CYP3A4 protein results in increased hydroxylation of Testosterone] which results in increased chemical synthesis of 6 beta-hydroxytestosterone]; fipronil promotes the reaction [[CYP3A4 protein results in increased metabolism of Testosterone] which results in increased chemical synthesis of 6 beta-hydroxytestosterone]; Ketoconazole inhibits the reaction [[CYP3A4 protein results in increased hydroxylation of Testosterone] which results in increased chemical synthesis of 6 beta-hydroxytestosterone]; Ketoconazole inhibits the reaction [CYP3A4 protein results in increased chemical synthesis of 6 beta-hydroxytestosterone]; NADP deficiency inhibits the reaction [erdafitinib inhibits the reaction [[CYP3A4 protein results in increased hydroxylation of Testosterone] which results in increased chemical synthesis of 6 beta-hydroxytestosterone]]; notopterol inhibits the reaction [[CYP3A4 protein results in increased metabolism of Testosterone] which results in increased chemical synthesis of 6 beta-hydroxytestosterone]; obeticholic acid inhibits the reaction [CYP3A4 protein results in increased chemical synthesis of 6 beta-hydroxytestosterone]; Troleandomycin inhibits the reaction [CYP3A4 protein results in increased chemical synthesis of 6 beta-hydroxytestosterone]; Verapamil inhibits the reaction [CYP3A4 protein results in increased chemical synthesis of 6 beta-hydroxytestosterone]
CTD PMID:12401345 PMID:16595712 PMID:17084830 PMID:19135037 PMID:20233841 More... NCBI chr12:14,321,771...14,343,886
Ensembl chr12:9,015,383...9,285,008
JBrowse link
G Cyp3a9 cytochrome P450, family 3, subfamily a, polypeptide 9 increases chemical synthesis
multiple interactions
ISO CYP3A5 protein results in increased chemical synthesis of 6 beta-hydroxytestosterone
[CYP3A5 protein results in increased hydroxylation of Testosterone] which results in increased chemical synthesis of 6 beta-hydroxytestosterone; erdafitinib inhibits the reaction [[CYP3A5 protein results in increased hydroxylation of Testosterone] which results in increased chemical synthesis of 6 beta-hydroxytestosterone]; Meclizine inhibits the reaction [CYP3A5 protein results in increased chemical synthesis of 6 beta-hydroxytestosterone]
CTD PMID:26239802 PMID:31102695 PMID:34189909 NCBI chr12:21,919,955...21,960,160
Ensembl chr12:16,806,207...16,846,422
JBrowse link
tauro-beta-muricholic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb11 ATP binding cassette subfamily B member 11 increases expression
multiple interactions
EXP tauromuricholic acid results in increased expression of ABCB11 protein
tauromuricholic acid results in increased expression of and results in increased activity of ABCB11 protein
CTD PMID:11672435 PMID:12644037 NCBI chr 3:74,424,620...74,520,646
Ensembl chr 3:54,017,127...54,112,730
JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 increases expression
multiple interactions
EXP tauromuricholic acid results in increased expression of ABCC2 protein
tauromuricholic acid results in increased expression of and results in increased activity of ABCC2 protein
CTD PMID:11672435 PMID:12644037 NCBI chr 1:252,613,875...252,672,459
Ensembl chr 1:242,664,657...242,723,238
JBrowse link
G Abcc3 ATP binding cassette subfamily C member 3 increases expression EXP tauromuricholic acid results in increased expression of ABCC3 protein CTD PMID:11672435 NCBI chr10:79,793,571...79,839,528
Ensembl chr10:79,296,693...79,342,595
JBrowse link
G Ahr aryl hydrocarbon receptor multiple interactions
increases abundance
increases secretion
ISO AHR gene mutant form inhibits the reaction [Tetrachlorodibenzodioxin affects the secretion of tauromuricholic acid]
AHR gene mutant form results in increased abundance of tauromuricholic acid
AHR gene mutant form results in increased secretion of tauromuricholic acid
CTD PMID:29452137 PMID:32679164 NCBI chr 6:57,961,423...57,998,901
Ensembl chr 6:52,234,089...52,271,568
JBrowse link
G Cxcl2 C-X-C motif chemokine ligand 2 multiple interactions ISO [Taurocholic Acid co-treated with muricholic acid co-treated with tauromuricholic acid] results in increased expression of CXCL2 mRNA CTD PMID:22098667 NCBI chr14:17,465,210...17,467,255
Ensembl chr14:17,181,062...17,183,075
JBrowse link
G Cxcl3 C-X-C motif chemokine ligand 3 multiple interactions ISO [Taurocholic Acid co-treated with muricholic acid co-treated with tauromuricholic acid] results in increased expression of CXCL1 mRNA CTD PMID:22098667 NCBI chr14:17,287,727...17,289,451
Ensembl chr14:17,270,146...17,289,511
JBrowse link
G Fech ferrochelatase affects abundance ISO FECH protein affects the abundance of tauromuricholic acid CTD PMID:29906468 NCBI chr18:57,945,123...57,978,327
Ensembl chr18:57,945,122...57,979,348
JBrowse link
G Icam1 intercellular adhesion molecule 1 multiple interactions ISO [Taurocholic Acid co-treated with muricholic acid co-treated with tauromuricholic acid] results in increased expression of ICAM1 mRNA CTD PMID:22098667 NCBI chr 8:27,829,688...27,841,618
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Il10 interleukin 10 increases abundance ISO IL10 gene mutant form results in increased abundance of tauromuricholic acid CTD PMID:27580383 NCBI chr13:45,024,921...45,029,586
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 affects abundance ISO NR1H4 protein affects the abundance of tauromuricholic acid CTD PMID:30556042 NCBI chr 7:25,733,471...25,829,440
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha multiple interactions
increases abundance
ISO [PPARA gene mutant form results in increased susceptibility to Clofibrate] which results in increased abundance of tauromuricholic acid; PPARA gene mutant form inhibits the reaction [Gemfibrozil results in increased abundance of tauromuricholic acid]
PPARA gene mutant form results in increased abundance of tauromuricholic acid
CTD PMID:24385052 PMID:29175453 NCBI chr 7:118,712,261...118,780,723
Ensembl chr 7:116,832,756...116,895,346
JBrowse link
G Slc10a2 solute carrier family 10 member 2 increases expression EXP tauromuricholic acid results in increased expression of SLC10A2 protein CTD PMID:11672435 NCBI chr16:84,386,528...84,409,475
Ensembl chr16:84,374,862...84,409,475
JBrowse link
G Smad3 SMAD family member 3 increases abundance ISO SMAD3 protein results in increased abundance of tauromuricholic acid CTD PMID:23034213 NCBI chr 8:73,022,204...73,132,324
Ensembl chr 8:64,110,039...64,236,960
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20856
    chemical entity 20854
      molecular entity 20853
        polyatomic entity 20798
          heteroatomic molecular entity 20735
            hydroxides 20228
              organic hydroxy compound 19767
                hydroxy steroid 15124
                  6-hydroxy steroid 21
                    6beta-hydroxy steroid 16
                      (22E,24R)-ergosta-7,22-diene-3beta,5alpha,6beta,9alpha-tetrol 0
                      (9xi,14xi,25S)-cholestane-3beta,4beta,6beta,7alpha,8,15alpha,16beta,26-octol 0
                      (9xi,14xi,25S)-cholestane-3beta,6beta,7alpha,8,15alpha,16beta,26-heptol 0
                      23,24-dimethylcholest-16(17)-E-en-3beta,5alpha,6beta,20(S)-tetrol 0
                      3beta,6beta-dihydroxy-5beta-cholan-24-oic acid 0
                      5alpha,6beta,17alpha,27-tetrahydroxywithanolide 0
                      5alpha,6beta,17alpha-trihydroxywithanolide 27-O-beta-D-glucoside 0
                      5alpha-cholestane-3beta,5,6beta-triol 0
                      5alpha-cholestane-5,6beta-diol 0
                      6beta-hydroxy-17beta-estradiol 0
                      6beta-hydroxyandrost-4-ene-3,17-dione 0
                      6beta-hydroxycortisol 1
                      6beta-hydroxycortisone 0
                      6beta-hydroxyestrone 0
                      6beta-hydroxyprednisolone 0
                      6beta-hydroxyprednisone 0
                      6beta-hydroxyprogesterone + 0
                      6beta-hydroxytestosterone + 3
                      alpha-muricholic acid + 0
                      beta-muricholic acid + 13
                      cerevisterol + 0
                      eurysterol A sulfonic acid 0
                      eurysterol B sulfonic acid 0
                      globosterol 0
                      murideoxycholic acid 0
                      physalin D 0
                      stigmastane-3beta,5alpha,6beta-triol 0
                      tauro-alpha-muricholic acid 0
                      tauro-beta-muricholic acid 13
Path 2
Term Annotations click to browse term
  CHEBI ontology 20856
    subatomic particle 20854
      composite particle 20854
        hadron 20854
          baryon 20854
            nucleon 20854
              atomic nucleus 20854
                atom 20854
                  main group element atom 20777
                    p-block element atom 20777
                      carbon group element atom 20710
                        carbon atom 20704
                          organic molecular entity 20704
                            organic molecule 20649
                              organic cyclic compound 20400
                                organic polycyclic compound 17562
                                  steroid 15305
                                    hydroxy steroid 15124
                                      6-hydroxy steroid 21
                                        6beta-hydroxy steroid 16
                                          (22E,24R)-ergosta-7,22-diene-3beta,5alpha,6beta,9alpha-tetrol 0
                                          (9xi,14xi,25S)-cholestane-3beta,4beta,6beta,7alpha,8,15alpha,16beta,26-octol 0
                                          (9xi,14xi,25S)-cholestane-3beta,6beta,7alpha,8,15alpha,16beta,26-heptol 0
                                          23,24-dimethylcholest-16(17)-E-en-3beta,5alpha,6beta,20(S)-tetrol 0
                                          3beta,6beta-dihydroxy-5beta-cholan-24-oic acid 0
                                          5alpha,6beta,17alpha,27-tetrahydroxywithanolide 0
                                          5alpha,6beta,17alpha-trihydroxywithanolide 27-O-beta-D-glucoside 0
                                          5alpha-cholestane-3beta,5,6beta-triol 0
                                          5alpha-cholestane-5,6beta-diol 0
                                          6beta-hydroxy-17beta-estradiol 0
                                          6beta-hydroxyandrost-4-ene-3,17-dione 0
                                          6beta-hydroxycortisol 1
                                          6beta-hydroxycortisone 0
                                          6beta-hydroxyestrone 0
                                          6beta-hydroxyprednisolone 0
                                          6beta-hydroxyprednisone 0
                                          6beta-hydroxyprogesterone + 0
                                          6beta-hydroxytestosterone + 3
                                          alpha-muricholic acid + 0
                                          beta-muricholic acid + 13
                                          cerevisterol + 0
                                          eurysterol A sulfonic acid 0
                                          eurysterol B sulfonic acid 0
                                          globosterol 0
                                          murideoxycholic acid 0
                                          physalin D 0
                                          stigmastane-3beta,5alpha,6beta-triol 0
                                          tauro-alpha-muricholic acid 0
                                          tauro-beta-muricholic acid 13
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