D5Rat154 Marker Search Result - Rat Genome Database

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Marker: D5Rat154

Symbol: D5Rat154
Previously known as: oxsts11054; R0095-D09; 
RGD ID: 39600
Expected Size: 192 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr85114,474,223 - 114,474,415 (+)Marker Load Pipeline
RH 3.4 Map5777.8RGD
RH 3.4 Map5777.8UniSTS
RH 2.0 Map5704.6RGD
SHRSP x BN Map559.2999RGD
Is Marker For: Strains:   AVN/Orl   BBDP/Rhw   BBDR/Rhw   BC/CpbU   BDIX/Han   BN/SsNHsd   BP/Cub   BUF/Pit   DA/PitN   DON/Melb   F344/Pit   FHH/Eur   IS/Kyo   LE/Mol   LEW/Pit   LH/Mav   MHS/Gib   MNRA/N   WN/N   WKY/OlaHsd   WTC/Kyo   LOU/CHan   MNR/N   MR/Pit   ODU/N   WF/Pit   WIST/Nhg   SR/Jr   MNS/Gib   NP9   OKA/Wsl   OM/Ztm   P5C   PVG/Pit   SD/Rij   SHR/OlaHsd   SHRSP/Riv   WAG/RijKyo   GK/KyoSwe   M520/N   ACI/N   BN-Lx/Cub   LN/Mav   GH/Omr   NEDH/K   SS/Jr   COP/OlaHsd  
QTLs:   Bp157   Bmd13  


Annotation


#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
4. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
5. UniSTS Pipeline RGD automated pipelines
6. RH Map Project RH Map Project, Laboratory of Genetic Research Website, 1-JUL-99, Laboratory of Genetic Research, Medical College of Wisconsin, http://www.lgr.mcw.edu/LGR/
7. A high density integrated genetic linkage and radiation hybrid map of the laboratory rat Steen RG, Kwitek-Black AE, etal., Genome Research, 1999, 6:1-8


 
Forward Primer CCAACTGCGATCCCTTTAAA
Reverse Primer CAACTGTCTCCAACTTCGCA
 
Strain, Expected Size(s)

ACI/N 220 AVN/Orl 184 BBDP/Rhw 222
BBDR/Rhw 222 BC/CpbU 216 BDIX/Han 220
BN-Lx/Cub 194 BN/SsNHsd 94 BP/Cub 220
BUF/Pit 204 COP/OlaHsd 220 DA/PitN 222
DON/Melb 216 F344/Pit 218 FHH/Eur 204
GH/Omr 204 GK/KyoSwe 220 IS/Kyo 222
LE/Mol 204 LEW/Pit 222 LH/Mav 220
LN/Mav 220 LOU/CHan 204 M520/N 204
MHS/Gib 220 MNR/N 220 MNRA/N 220
MNS/Gib 204 MR/Pit 220 NEDH/K 218
NP9 220 ODU/N 222 OKA/Wsl 220
OM/Ztm 220 P5C 204 PVG/Pit 218
SD/Rij 204 SHR/OlaHsd 220 SHRSP/Riv 224
SR/Jr 220 SS/Jr 220 WAG/RijKyo 206
WF/Pit 218 WIST/Nhg 218 WKY/OlaHsd 218
WN/N 204 WTC/Kyo 216





Database
Acc Id
Source(s)
NCBI Gene 100303033 UniSTS