D9Rat77 Marker Search Result - Rat Genome Database

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Marker: D9Rat77

Symbol: D9Rat77
Previously known as: oxsts11725; R0057-A06; 
RGD ID: 37484
Expected Size: 206 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
RH 3.4 Map9861.7RGD
RH 3.4 Map9861.7UniSTS
RH 2.0 Map91027.9RGD
FHH x ACI Map983.51RGD
Is Marker For: Strains:   AVN/Orl   BBDP/Rhw   BBDR/Rhw   BC/CpbU   BDIX/Han   BDVII/Cub   BN/SsNHsd   BP/Cub   BUF/Pit   DA/PitN   DON/Melb   F344/Pit   FHH/Eur   LE/Mol   LEW/Pit   LH/Mav   MHS/Gib   WN/N   WKY/OlaHsd   WTC/Kyo   LOU/CHan   MNR/N   MR/Pit   ODU/N   WF/Pit   WIST/Nhg   SR/Jr   MNS/Gib   NP9   OKA/Wsl   OM/Ztm   PVG/Pit   SD/Rij   SHR/OlaHsd   SHRSP/Riv   WAG/RijKyo   GK/KyoSwe   M520/N   ACI/N   BN-Lx/Cub   LN/Mav   GH/Omr   NEDH/K  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
4. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
5. UniSTS Pipeline RGD automated pipelines
6. RH Map Project RH Map Project, Laboratory of Genetic Research Website, 1-JUL-99, Laboratory of Genetic Research, Medical College of Wisconsin, http://www.lgr.mcw.edu/LGR/
7. A high density integrated genetic linkage and radiation hybrid map of the laboratory rat Steen RG, Kwitek-Black AE, etal., Genome Research, 1999, 6:1-8

Strains and Sequence

Sequence
 
Forward Primer CAGCACCCAACAACTAACCA
Reverse Primer CAACTCTTTCCTAGACCGCG
 
Template 
TTCCCCCTCCAGCACAGTCGACTGTATGACCTNTCCCGGTTGTCGATTCCTANTGCCAGAAAAC
TCGAAGGAGCCCCTTTGCCCGCCCGTCCTATTTAGTACAACTCTTTCCTAGACCGCGGTAAGAG
TCTAATAGTAAGGGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGAG
ATTTTTAGTATACTAACCAATTGATTTACTACAGGCTTCCTCCCTGTGCTGTCAGCAGCATCAG
TGTATGAGTTAGCCTTCTTTAGTTCAAGGTCTGGTTAGTTGTTGGGTGCTGGGCAAACACATAG
GGGTACCGAGCTCGAATTCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCT
CACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGGNAGCCTGGGGTGCCTAATGAGTGA
GCCAANNCNCANAATTGCGTTGCCTCACTGCCCGCTTTCCAGTCGNGNACCTGNNT

Region

Nucleotide Sequences


Additional Information