Ppih (peptidylprolyl isomerase H) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Ppih (peptidylprolyl isomerase H) Rattus norvegicus
Analyze
Symbol: Ppih
Name: peptidylprolyl isomerase H
RGD ID: 1564921
Description: Predicted to enable peptidyl-prolyl cis-trans isomerase activity and ribonucleoprotein complex binding activity. Predicted to be involved in positive regulation of viral genome replication. Predicted to be located in cytoplasm and nuclear speck. Predicted to be part of U4/U6 snRNP and U4/U6 x U5 tri-snRNP complex. Orthologous to human PPIH (peptidylprolyl isomerase H); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 4,4'-sulfonyldiphenol; 6-propyl-2-thiouracil; alpha-Zearalanol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC366461; peptidyl-prolyl cis-trans isomerase H; peptidylprolyl isomerase H (cyclophilin H); RGD1564921; similar to peptidyl prolyl isomerase H
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85138,191,624 - 138,209,625 (-)NCBIGRCr8
mRatBN7.25132,906,324 - 132,924,341 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5132,906,328 - 132,924,267 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5135,633,875 - 135,652,694 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05137,390,334 - 137,409,153 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05137,410,930 - 137,429,749 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05138,343,934 - 138,361,743 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5138,352,916 - 138,361,702 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05142,160,007 - 142,178,024 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45139,959,365 - 139,969,320 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera5131,431,800 - 131,449,612 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
PpihRatCharcot-Marie-Tooth disease dominant intermediate C  ISORGD:13473008554872ClinVar Annotator: match by term: Charcot-Marie-Tooth disease dominant intermediate CClinVarPMID:28492532
PpihRatglucose transporter type 1 deficiency syndrome 1  ISORGD:13473008554872ClinVar Annotator: match by term: GLUT1 deficiency syndrome 1, autosomal recessiveClinVarPMID:28492532

1 to 20 of 75 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
PpihRat17alpha-ethynylestradiol affects expressionISORGD:16151376480464Ethinyl Estradiol affects the expression of PPIH mRNACTDPMID:17555576
PpihRat17alpha-ethynylestradiol multiple interactionsISORGD:16151376480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of PPIH mRNACTDPMID:17942748
PpihRat17alpha-ethynylestradiol increases expressionISORGD:16151376480464Ethinyl Estradiol results in increased expression of PPIH mRNACTDPMID:17942748
PpihRat2,2',4,4'-Tetrabromodiphenyl ether decreases expressionISORGD:134730064804642,2',4,4'-tetrabromodiphenyl ether results in decreased expression of PPIH proteinCTDPMID:31675489
PpihRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISORGD:16151376480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of PPIH mRNACTDPMID:17942748
PpihRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISORGD:16151376480464Tetrachlorodibenzodioxin affects the expression of PPIH mRNACTDPMID:21570461
PpihRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISORGD:16151376480464Tetrachlorodibenzodioxin results in decreased expression of PPIH mRNACTDPMID:25270620
PpihRat2,3-dimethoxynaphthalene-1,4-dione increases expressionISORGD:134730064804642,3-dimethoxy-1,4-naphthoquinone results in increased expression of PPIH mRNACTDPMID:17547211
PpihRat3,4-methylenedioxymethamphetamine decreases expressionISORGD:16151376480464N-Methyl-3,4-methylenedioxyamphetamine results in decreased expression of PPIH mRNACTDPMID:20188158
PpihRat3-methylcholanthrene increases expressionISORGD:16151376480464Methylcholanthrene results in increased expression of PPIH mRNACTDPMID:20713471
PpihRat4,4'-diaminodiphenylmethane decreases expressionISORGD:161513764804644,4'-diaminodiphenylmethane results in decreased expression of PPIH mRNACTDPMID:18648102
PpihRat4,4'-sulfonyldiphenol increases expressionISORGD:16151376480464bisphenol S results in increased expression of PPIH mRNACTDPMID:39298647
PpihRat4,4'-sulfonyldiphenol multiple interactionsEXP 6480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of more ...CTDPMID:36041667
PpihRat4-hydroxyphenyl retinamide decreases expressionISORGD:16151376480464Fenretinide results in decreased expression of PPIH mRNACTDPMID:28973697
PpihRat6-propyl-2-thiouracil increases expressionEXP 6480464Propylthiouracil results in increased expression of PPIH mRNACTDPMID:24780913
PpihRatalpha-Zearalanol multiple interactionsEXP 6480464[Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of PPIH mRNACTDPMID:35163327
PpihRatantimony(0) increases expressionISORGD:13473006480464Antimony results in increased expression of PPIH mRNACTDPMID:17547211
PpihRatarsenous acid increases expressionISORGD:13473006480464Arsenic Trioxide results in increased expression of PPIH mRNACTDPMID:17547211
PpihRatbenzo[a]pyrene decreases methylationISORGD:13473006480464Benzo(a)pyrene results in decreased methylation of PPIH promoterCTDPMID:27901495
PpihRatbeta-lapachone increases expressionISORGD:13473006480464beta-lapachone results in increased expression of PPIH mRNACTDPMID:38218311

1 to 20 of 75 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
PpihRatbiological_process  ND 159840705/2015: no relevant rat dataRGD 
PpihRatpositive regulation of viral genome replication involved_inISORGD:13473001624291 PMID:19932913RGDPMID:19932913
PpihRatpositive regulation of viral genome replication involved_inIEAUniProtKB:O43447|ensembl:ENSP000003066141600115GO_REF:0000107EnsemblGO_REF:0000107
PpihRatprotein folding involved_inIEAInterPro:IPR0208921600115GO_REF:0000002InterProGO_REF:0000002

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
PpihRatcytoplasm located_inISORGD:13473001624291 PMID:9570313RGDPMID:9570313
PpihRatcytoplasm located_inIEAUniProtKB:O43447|ensembl:ENSP000003066141600115GO_REF:0000107EnsemblGO_REF:0000107
PpihRatnuclear speck located_inISORGD:13473001624291 PMID:9570313RGDPMID:9570313
PpihRatnuclear speck located_inIEAUniProtKB:O43447|ensembl:ENSP000003066141600115GO_REF:0000107EnsemblGO_REF:0000107
PpihRatU4/U6 snRNP part_ofISORGD:13473001624291 PMID:9570313RGDPMID:9570313
PpihRatU4/U6 snRNP part_ofIEAUniProtKB:O43447|ensembl:ENSP000003066141600115GO_REF:0000107EnsemblGO_REF:0000107
PpihRatU4/U6 x U5 tri-snRNP complex part_ofISORGD:13473001624291 PMID:9570313RGDPMID:9570313
PpihRatU4/U6 x U5 tri-snRNP complex part_ofIEAUniProtKB:O43447|ensembl:ENSP000003066141600115GO_REF:0000107EnsemblGO_REF:0000107

Molecular Function
1 to 12 of 12 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
PpihRatisomerase activity enablesIEAUniProtKB-KW:KW-04131600115GO_REF:0000043UniProtGO_REF:0000043
PpihRatpeptidyl-prolyl cis-trans isomerase activity enablesISORGD:13473001624291 PMID:20676357, PMID:9570313RGDPMID:20676357|PMID:9570313
PpihRatpeptidyl-prolyl cis-trans isomerase activity enablesIEAInterPro:IPR002130|InterPro:IPR0208921600115GO_REF:0000002InterProGO_REF:0000002
PpihRatpeptidyl-prolyl cis-trans isomerase activity enablesIEAEC:5.2.1.81600115GO_REF:0000003UniProtGO_REF:0000003
PpihRatpeptidyl-prolyl cis-trans isomerase activity enablesIEAUniProtKB:O43447|ensembl:ENSP000003066141600115GO_REF:0000107EnsemblGO_REF:0000107
PpihRatpeptidyl-prolyl cis-trans isomerase activity enablesIEARHEA:162371600115GO_REF:0000116RHEAGO_REF:0000116
PpihRatpeptidyl-prolyl cis-trans isomerase activity enablesIEAUniRule:UR0002487901600115GO_REF:0000104UniProtGO_REF:0000104
PpihRatpeptidyl-prolyl cis-trans isomerase activity enablesIEAInterPro:IPR002130|InterPro:IPR020892|InterPro:IPR0249361600115GO_REF:0000002InterProGO_REF:0000002
PpihRatpeptidyl-prolyl cis-trans isomerase activity enablesIEAUniProtKB-KW:KW-06971600115GO_REF:0000043UniProtGO_REF:0000043
PpihRatprotein binding enablesISORGD:13473001624291UniProtKB:O43172|UniProtKB:P0C6X7-PRO_0000037309|UniProtKB:P42858|UniProtKB:P98170|UniProtKB:Q7L591-3|UniProtKB:Q8TBB1|UniProtKB:Q92802|UniProtKB:Q99633|UniProtKB:Q9GZT8|UniProtKB:Q9NP55|UniProtKB:Q9UHD9 PMID:16723661, PMID:19615732, PMID:22046132, PMID:22365833, PMID:25383878, PMID:25416956, PMID:25959826, PMID:27107012, PMID:29997244, PMID:32296183, PMID:32814053, PMID:33961781, PMID:9570313RGDPMID:16723661|PMID:19615732|PMID:22046132|PMID:22365833|PMID:25383878|PMID:25416956|PMID:25959826|PMID:27107012|PMID:29997244|PMID:32296183|PMID:32814053|PMID:33961781|PMID:9570313
PpihRatribonucleoprotein complex binding enablesISORGD:13473001624291 PMID:9570313RGDPMID:9570313
PpihRatribonucleoprotein complex binding enablesIEAUniProtKB:O43447|ensembl:ENSP000003066141600115GO_REF:0000107EnsemblGO_REF:0000107
1 to 12 of 12 rows

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
PpihRatspliceosome pathway   ISORGD:13473009686376 RGD 

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
PpihRatspliceosome pathway   IEA 6907045 KEGGrno:03040

#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Spliceosomal immunophilins. Mesa A, etal., FEBS Lett. 2008 Jul 9;582(16):2345-51. doi: 10.1016/j.febslet.2008.06.006. Epub 2008 Jun 9.
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Comprehensive gene review and curation RGD comprehensive gene curation
PMID:9570313   PMID:19932913   PMID:20676357  



Ppih
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85138,191,624 - 138,209,625 (-)NCBIGRCr8
mRatBN7.25132,906,324 - 132,924,341 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5132,906,328 - 132,924,267 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5135,633,875 - 135,652,694 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05137,390,334 - 137,409,153 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05137,410,930 - 137,429,749 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05138,343,934 - 138,361,743 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5138,352,916 - 138,361,702 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05142,160,007 - 142,178,024 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45139,959,365 - 139,969,320 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera5131,431,800 - 131,449,612 (-)NCBICelera
Cytogenetic Map5q36NCBI
PPIH
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38142,658,423 - 42,681,654 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl142,658,335 - 42,676,758 (+)EnsemblGRCh38hg38GRCh38
GRCh37143,124,094 - 43,142,429 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36142,896,635 - 42,915,016 (+)NCBINCBI36Build 36hg18NCBI36
Build 34142,793,140 - 42,811,521NCBI
Celera141,405,975 - 41,424,356 (+)NCBICelera
Cytogenetic Map1p34.2NCBI
HuRef141,244,218 - 41,262,600 (+)NCBIHuRef
CHM1_1143,240,906 - 43,259,287 (+)NCBICHM1_1
T2T-CHM13v2.0142,528,918 - 42,552,149 (+)NCBIT2T-CHM13v2.0
Ppih
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394119,157,207 - 119,177,720 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4119,157,207 - 119,177,743 (-)EnsemblGRCm39 Ensembl
GRCm384119,300,010 - 119,320,523 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4119,300,010 - 119,320,546 (-)EnsemblGRCm38mm10GRCm38
MGSCv374118,972,615 - 118,993,128 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364118,797,947 - 118,818,411 (-)NCBIMGSCv36mm8
Celera4118,027,842 - 118,048,366 (-)NCBICelera
Cytogenetic Map4D2.1NCBI
cM Map455.34NCBI
Ppih
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555372,211,410 - 2,230,452 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555372,211,566 - 2,229,444 (+)NCBIChiLan1.0ChiLan1.0
PPIH
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21184,130,421 - 184,153,502 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11183,272,085 - 183,295,157 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0141,958,260 - 41,981,598 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1143,336,039 - 43,354,609 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl143,336,039 - 43,353,898 (+)Ensemblpanpan1.1panPan2
PPIH
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.115671,323 - 689,627 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl15671,324 - 689,544 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha15926,045 - 944,371 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.015752,681 - 771,039 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl15752,682 - 770,962 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.115662,128 - 680,381 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.015723,569 - 741,836 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.015738,714 - 757,011 (-)NCBIUU_Cfam_GSD_1.0
Ppih
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505858,179,131 - 58,200,103 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647424,003,827 - 24,024,922 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647424,003,963 - 24,024,885 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PPIH
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6168,742,005 - 168,760,286 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16168,741,999 - 168,760,350 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26156,223,015 - 156,241,360 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PPIH
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12090,250,959 - 90,275,275 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2090,256,081 - 90,274,751 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603326,635,055 - 26,659,466 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ppih
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248921,916,912 - 1,935,875 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248921,916,873 - 1,935,458 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Ppih
68 total Variants

Predicted Target Of
Summary Value
Count of predictions:132
Count of miRNA genes:102
Interacting mature miRNAs:109
Transcripts:ENSRNOT00000064712, ENSRNOT00000067943
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 47 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)597059760147465714Rat
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5124965598166875058Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5111416838156416838Rat
1300122Wbc1White blood cell count QTL 12.75leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)5125392826139989768Rat
7365049Bp359Blood pressure QTL 359arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5128071929134724733Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)594858972143070159Rat
70156Niddm30Non-insulin dependent diabetes mellitus QTL 303.98blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)5129132447151006154Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5128506074166875058Rat
1331803Rf32Renal function QTL 322.798kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)5129132428143070159Rat

1 to 10 of 47 rows
D5Got61  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25132,914,427 - 132,914,706 (+)MAPPERmRatBN7.2
Rnor_6.05138,351,877 - 138,352,155NCBIRnor6.0
Rnor_5.05142,168,168 - 142,168,446UniSTSRnor5.0
RGSC_v3.45139,891,233 - 139,891,512RGDRGSC3.4
RGSC_v3.45139,891,234 - 139,891,512UniSTSRGSC3.4
RGSC_v3.15139,896,460 - 139,896,738RGD
Celera5131,439,743 - 131,440,021UniSTS
RH 3.4 Map5870.8UniSTS
RH 3.4 Map5870.8RGD
RH 2.0 Map5863.1RGD
Cytogenetic Map5q36UniSTS
RH138343  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25132,912,194 - 132,912,346 (+)MAPPERmRatBN7.2
Rnor_6.05138,349,644 - 138,349,795NCBIRnor6.0
Rnor_5.05142,165,717 - 142,165,868UniSTSRnor5.0
RGSC_v3.45139,889,001 - 139,889,152UniSTSRGSC3.4
Celera5131,437,510 - 131,437,661UniSTS
RH 3.4 Map5866.2UniSTS
RH 3.4 Map5868.5UniSTS
Cytogenetic Map5q36UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000064712   ⟹   ENSRNOP00000063468
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5132,916,003 - 132,924,267 (-)Ensembl
Rnor_6.0 Ensembl5138,353,452 - 138,361,702 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000067943   ⟹   ENSRNOP00000059353
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5132,915,467 - 132,924,267 (-)Ensembl
Rnor_6.0 Ensembl5138,352,916 - 138,361,702 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000098415   ⟹   ENSRNOP00000076976
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5132,915,757 - 132,924,267 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000108155   ⟹   ENSRNOP00000088556
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5132,906,328 - 132,924,265 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000112897   ⟹   ENSRNOP00000079411
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5132,912,180 - 132,924,265 (-)Ensembl
RefSeq Acc Id: NM_001399453   ⟹   NP_001386382
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85138,191,624 - 138,209,580 (-)NCBI
mRatBN7.25132,906,324 - 132,924,280 (-)NCBI
RefSeq Acc Id: XM_006238771   ⟹   XP_006238833
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85138,197,493 - 138,209,625 (-)NCBI
mRatBN7.25132,912,046 - 132,924,341 (-)NCBI
Rnor_6.05138,349,495 - 138,361,743 (-)NCBI
Rnor_5.05142,160,007 - 142,178,024 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006238772   ⟹   XP_006238834
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85138,197,493 - 138,209,625 (-)NCBI
mRatBN7.25132,912,046 - 132,924,341 (-)NCBI
Rnor_6.05138,349,495 - 138,361,743 (-)NCBI
Rnor_5.05142,160,007 - 142,178,024 (-)NCBI
Sequence:
RefSeq Acc Id: XP_006238833   ⟸   XM_006238771
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZMT9 (UniProtKB/TrEMBL),   A6JZN2 (UniProtKB/TrEMBL),   A0A8I6A6F0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006238834   ⟸   XM_006238772
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZMT9 (UniProtKB/TrEMBL),   A6JZN2 (UniProtKB/TrEMBL),   A0A8I6A6F0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000059353   ⟸   ENSRNOT00000067943
Ensembl Acc Id: ENSRNOP00000063468   ⟸   ENSRNOT00000064712
Ensembl Acc Id: ENSRNOP00000088556   ⟸   ENSRNOT00000108155
PPIase cyclophilin-type

Name Modeler Protein Id AA Range Protein Structure
AF-D4A5R0-F1-model_v2 AlphaFold D4A5R0 1-176 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13693984
Promoter ID:EPDNEW_R4505
Type:multiple initiation site
Name:Ppih_1
Description:peptidylprolyl isomerase H
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.05138,361,727 - 138,361,787EPDNEW


1 to 30 of 30 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-40090 BioCyc
Ensembl Genes ENSRNOG00000008489 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000064712.3 UniProtKB/TrEMBL
  ENSRNOT00000067943.5 UniProtKB/TrEMBL
  ENSRNOT00000098415.1 UniProtKB/TrEMBL
  ENSRNOT00000108155 ENTREZGENE
  ENSRNOT00000108155.1 UniProtKB/TrEMBL
  ENSRNOT00000112897.1 UniProtKB/TrEMBL
Gene3D-CATH 2.40.100.10 UniProtKB/TrEMBL
InterPro Cyclophilin-like_dom UniProtKB/TrEMBL
  Cyclophilin-type_PPIase UniProtKB/TrEMBL
  Pep-Pro_Isoase_cyclophilin_CS UniProtKB/TrEMBL
  PPIase_cyclophilin UniProtKB/TrEMBL
NCBI Gene 366461 ENTREZGENE
PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE UniProtKB/TrEMBL
  PEPTIDYL-PROLYL CIS-TRANS ISOMERASE D-RELATED UniProtKB/TrEMBL
Pfam Pro_isomerase UniProtKB/TrEMBL
PhenoGen Ppih PhenoGen
PIRSF Peptidylpro_ismrse UniProtKB/TrEMBL
PRINTS CSAPPISMRASE UniProtKB/TrEMBL
PROSITE CSA_PPIASE_1 UniProtKB/TrEMBL
  CSA_PPIASE_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000008489 RatGTEx
Superfamily-SCOP SSF50891 UniProtKB/TrEMBL
UniProt A0A8I5Y5S4_RAT UniProtKB/TrEMBL
  A0A8I5ZMT9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A6F0 ENTREZGENE, UniProtKB/TrEMBL
  A6JZN2 ENTREZGENE, UniProtKB/TrEMBL
  D3ZUZ9_RAT UniProtKB/TrEMBL
  D4A5R0_RAT UniProtKB/TrEMBL
1 to 30 of 30 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-21 Ppih  peptidylprolyl isomerase H  Ppih  peptidylprolyl isomerase H (cyclophilin H)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-05-05 Ppih  peptidylprolyl isomerase H (cyclophilin H)  RGD1564921  similar to peptidyl prolyl isomerase H  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1564921  similar to peptidyl prolyl isomerase H   RGD1564921_predicted  similar to peptidyl prolyl isomerase H (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1564921_predicted  similar to peptidyl prolyl isomerase H (predicted)  LOC366461  similar to peptidyl prolyl isomerase H  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC366461  similar to peptidyl prolyl isomerase H      Symbol and Name status set to provisional 70820 PROVISIONAL