HSPA5 (heat shock protein family A (Hsp70) member 5) - Rat Genome Database

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Gene: HSPA5 (heat shock protein family A (Hsp70) member 5) Homo sapiens
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Symbol: HSPA5
Name: heat shock protein family A (Hsp70) member 5
RGD ID: 736447
HGNC Page HGNC
Description: Exhibits several functions, including ATP binding activity; misfolded protein binding activity; and ubiquitin protein ligase binding activity. Involved in several processes, including cellular response to glucose starvation; positive regulation of cell migration; and protein localization to endoplasmic reticulum. Localizes to several cellular components, including endoplasmic reticulum; endoplasmic reticulum-Golgi intermediate compartment; and midbody. Colocalizes with COP9 signalosome. Implicated in dopamine beta-hydroxylase deficiency. Biomarker of high grade glioma; inflammatory bowel disease; and rheumatoid arthritis.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: heat shock 70kd protein 5; 78 kDa glucose-regulated protein; BIP; endoplasmic reticulum chaperone BiP; endoplasmic reticulum lumenal Ca(2+)-binding protein grp78; epididymis secretory sperm binding protein Li 89n; FLJ26106; glucose-regulated protein, 78-kD; glucose-regulated protein, 78kDa; GRP-78; GRP78; heat shock 70 kDa protein 5; heat shock 70kD protein 5 (glucose-regulated protein, 78kD); heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa); heat shock protein 70 family protein 5; heat shock protein family A member 5; Heat-shock 70kD protein-5 (glucose-regulated protein, 78kD); HEL-S-89n; HSP70 family protein 5; immunoglobulin heavy chain-binding protein; MIF2
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: AC105250.1   HSPA5P1  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
NCBI Annotation Information: Note: This gene has been reviewed for its involvement in coronavirus biology, and is relevant for COVID-19 treatment.
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl9125,234,853 - 125,241,382 (-)EnsemblGRCh38hg38GRCh38
GRCh389125,234,853 - 125,241,343 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh379127,997,132 - 128,003,622 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369127,036,953 - 127,043,430 (-)NCBINCBI36hg18NCBI36
Build 349125,076,687 - 125,083,163NCBI
Celera998,645,114 - 98,651,649 (-)NCBI
Cytogenetic Map9q33.3NCBI
HuRef997,609,713 - 97,616,253 (-)NCBIHuRef
CHM1_19128,146,874 - 128,153,413 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-pilocarpine  (ISO)
(+)-schisandrin B  (ISO)
(+)-Tetrandrine  (EXP)
(-)-anisomycin  (ISO)
(-)-gambogic acid  (EXP)
(R)-adrenaline  (ISO)
(R)-lipoic acid  (ISO)
(R)-noradrenaline  (ISO)
(R,S)-Scoulerine  (EXP)
(S)-colchicine  (EXP)
(S)-nicotine  (EXP,ISO)
(Z)-3-butylidenephthalide  (EXP)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
1,3-dinitrobenzene  (ISO)
1,4-dithiothreitol  (EXP,ISO)
1-bromopropane  (ISO)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (EXP,ISO)
1-nitropyrene  (EXP)
15-acetyldeoxynivalenol  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (EXP)
17beta-hydroxy-5alpha-androstan-3-one  (EXP)
1H-pyrazole  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP,ISO)
2,2,2-tetramine  (ISO)
2,3,3,3-tetrafluoro-2-(heptafluoropropoxy)propanoic acid  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-trinitrobenzenesulfonic acid  (ISO)
2,4,6-trinitrotoluene  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2,4-dichlorophenol  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2-amino-2-deoxy-D-galactopyranose  (ISO)
2-amino-2-deoxy-D-glucopyranose  (EXP,ISO)
2-arachidonoylglycerol  (EXP)
2-deoxy-D-glucose  (EXP)
2-hydroxypropanoic acid  (EXP)
2-methyl-6-(phenylethynyl)pyridine  (ISO)
2-tert-butylhydroquinone  (EXP)
20-hydroxyecdysone  (EXP)
3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine  (ISO)
3,3'-diindolylmethane  (EXP)
3-acetyldeoxynivalenol  (EXP)
3-chloropropane-1,2-diol  (ISO)
3-methyladenine  (EXP)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-diisothiocyano-trans-stilbene-2,2'-disulfonic acid  (EXP)
4-hydroxynon-2-enal  (EXP,ISO)
4-hydroxyphenyl retinamide  (EXP,ISO)
4-phenylbutylamine  (ISO)
4-phenylbutyric acid  (EXP,ISO)
5-(N,N-hexamethylene)amiloride  (EXP)
5-fluorouracil  (EXP)
6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxamide  (ISO)
7,12-dimethyltetraphene  (ISO)
7H-xanthine  (ISO)
8-Br-cAMP  (EXP)
9H-xanthine  (ISO)
acetylsalicylic acid  (EXP)
acrolein  (EXP,ISO)
acrylamide  (ISO)
actinomycin D  (ISO)
aflatoxin B1  (EXP,ISO)
aldehydo-D-glucosamine  (EXP,ISO)
aldehydo-D-glucose  (EXP,ISO)
all-trans-retinal  (EXP)
all-trans-retinoic acid  (EXP,ISO)
alloxan  (ISO)
Aloe emodin  (EXP)
alpha-(methylamino)isobutyric acid  (ISO)
alpha-D-galactose  (EXP)
amiloride  (ISO)
ammonium chloride  (ISO)
amosite asbestos  (EXP)
amphibole asbestos  (EXP)
aniline  (ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (EXP,ISO)
antimycin A  (ISO)
apigenin  (ISO)
aristolochic acid  (EXP)
Aroclor 1254  (ISO)
arsane  (EXP,ISO)
arsenic atom  (EXP,ISO)
arsenite(3-)  (EXP,ISO)
arsenous acid  (EXP,ISO)
atazanavir sulfate  (EXP)
ATP  (EXP)
atrazine  (EXP)
BAPTA  (EXP)
beauvericin  (EXP)
benomyl  (EXP)
benzalkonium chloride  (EXP)
benzene  (EXP)
benzo[a]pyrene  (EXP,ISO)
beta-D-glucosamine  (EXP,ISO)
beta-naphthoflavone  (EXP)
bifenthrin  (EXP)
bilirubin IXalpha  (EXP,ISO)
bis(2-chloroethyl) sulfide  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bleomycin A2  (ISO)
boric acid  (EXP)
bortezomib  (EXP,ISO)
brefeldin A  (EXP,ISO)
bromobenzene  (ISO)
bufalin  (EXP)
bupropion  (EXP)
buspirone  (ISO)
Butylparaben  (EXP)
butyric acid  (EXP)
cadmium atom  (EXP)
cadmium dichloride  (EXP,ISO)
cadmium sulfate  (EXP)
Calcimycin  (EXP,ISO)
calcium atom  (EXP)
calcium(0)  (EXP)
calix[6]arene  (EXP)
Candesartan cilexetil  (ISO)
cannabidiol  (ISO)
cantharidin  (EXP)
capsaicin  (EXP)
carbaryl  (EXP)
carbon atom  (EXP)
carbon nanotube  (EXP,ISO)
carboplatin  (ISO)
casticin  (EXP)
celastrol  (EXP)
celecoxib  (EXP)
ceruletide  (ISO)
chenodeoxycholic acid  (EXP)
Chikusetsusaponin-V  (EXP)
chlordecone  (ISO)
chlorhexidine  (ISO)
chloroacetaldehyde  (EXP)
chloroacetic acid  (ISO)
chlorobenzene  (EXP)
chloroethene  (ISO)
chloropicrin  (EXP)
chloroquine  (ISO)
chlorpyrifos  (EXP,ISO)
choline  (EXP,ISO)
chromium(6+)  (EXP,ISO)
chrysazin  (EXP)
cidofovir anhydrous  (EXP)
cimetidine  (ISO)
cisplatin  (EXP,ISO)
clofibrate  (ISO)
cobalt dichloride  (ISO)
cobicistat  (ISO)
cocaine  (EXP,ISO)
colforsin daropate hydrochloride  (EXP)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) chloride  (ISO)
copper(II) sulfate  (EXP,ISO)
crocidolite asbestos  (ISO)
curcumin  (EXP,ISO)
cycloheximide  (EXP,ISO)
cyclophosphamide  (EXP,ISO)
cyclosporin A  (EXP,ISO)
cylindrospermopsin  (EXP)
cypermethrin  (EXP)
cytochalasin B  (ISO)
D-glucose  (EXP,ISO)
D-mannopyranose  (EXP)
D-penicillamine  (EXP,ISO)
dantrolene  (EXP)
DDT  (EXP,ISO)
demethoxycurcumin  (EXP)
deoxycholic acid  (EXP)
deoxynivalenol  (EXP,ISO)
diallyl trisulfide  (EXP)
diamminedichloroplatinum  (EXP)
diarsenic trioxide  (EXP,ISO)
diazinon  (EXP,ISO)
dibutyl phthalate  (ISO)
dichlorine  (ISO)
diclofenac  (EXP,ISO)
dicoumarol  (EXP)
Dienochlor  (EXP)
diethyl maleate  (ISO)
dihydrocapsaicin  (EXP)
dimethylarsinic acid  (ISO)
dioscin  (ISO)
dioxygen  (EXP,ISO)
disodium selenite  (EXP)
diuron  (ISO)
dopamine  (EXP)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
edaravone  (ISO)
elemental carbon  (EXP)
emodin  (ISO)
endosulfan  (EXP,ISO)
enniatin  (EXP)
enzyme inhibitor  (EXP)
ethanol  (EXP,ISO)
ethylbenzene  (EXP)
fangchinoline  (EXP)
fenofibrate  (ISO)
fisetin  (EXP)
flavokawain B  (EXP)
fluoranthene  (ISO)
fluorescein 5-isothiocyanate  (EXP)
folic acid  (EXP,ISO)
formetanate  (EXP)
fructose  (ISO)
fulvestrant  (ISO)
fumonisin B1  (EXP)
furan  (ISO)
Fusarenone X  (EXP)
gadolinium atom  (ISO)
gadolinium trichloride  (ISO)
galactose  (EXP)
gedunin  (EXP)
geldanamycin  (EXP)
gemcitabine  (EXP)
gentamycin  (ISO)
ginsenoside Rg1  (EXP)
glafenine  (ISO)
glucose  (EXP,ISO)
glutathione  (ISO)
glycine  (EXP)
glycine betaine  (ISO)
glycochenodeoxycholic acid  (EXP)
glycocholic acid  (EXP)
glycodeoxycholic acid  (EXP)
glyphosate  (ISO)
graphene oxide  (ISO)
graphite  (EXP)
Guanabenz  (ISO)
GW 4064  (ISO)
hexadecanoic acid  (EXP,ISO)
homocysteine  (EXP)
hyaluronic acid  (ISO)
hydralazine  (ISO)
hydrazine  (ISO)
hydrogen peroxide  (EXP,ISO)
hydroxytyrosol  (ISO)
ibuprofen  (EXP,ISO)
icosanoid  (ISO)
imidacloprid  (EXP)
indometacin  (EXP,ISO)
indoxyl sulfate  (ISO)
iodide salt  (ISO)
ionomycin  (ISO)
iprodione  (EXP)
isoflavones  (ISO)
isoprenaline  (EXP,ISO)
ivermectin  (EXP)
ketamine  (ISO)
KN-93  (ISO)
kojic acid  (ISO)
L-1,4-dithiothreitol  (EXP,ISO)
L-ascorbic acid  (EXP)
L-methionine  (ISO)
lactacystin  (EXP)
lanthanum atom  (EXP)
lead diacetate  (ISO)
lead nitrate  (EXP,ISO)
lead(0)  (EXP,ISO)
lead(2+)  (EXP,ISO)
lead(II) chloride  (EXP,ISO)
linagliptin  (ISO)
linoleic acid  (ISO)
lipoic acid  (ISO)
lipopolysaccharide  (EXP,ISO)
lithium atom  (ISO)
lithium hydride  (ISO)
losartan  (ISO)
luteolin  (EXP,ISO)
LY294002  (EXP,ISO)
lycopene  (ISO)
maneb  (ISO)
manganese atom  (EXP,ISO)
manganese(0)  (EXP,ISO)
manganese(II) chloride  (ISO)
meglumine amidotrizoate  (ISO)
melatonin  (ISO)
menadione  (EXP)
menaquinone  (EXP)
mercury atom  (ISO)
mercury dichloride  (ISO)
mercury(0)  (ISO)
metformin  (ISO)
methamphetamine  (EXP,ISO)
methapyrilene  (ISO)
methomyl  (EXP)
methyl beta-cyclodextrin  (EXP)
methylmercury chloride  (ISO)
methylparaben  (EXP)
methylseleninic acid  (EXP)
metyrapone  (EXP)
microcystin  (ISO)
microcystin RR  (ISO)
minocycline  (ISO)
mithramycin  (EXP)
Monobutylphthalate  (ISO)
monosodium L-glutamate  (ISO)
morusin  (EXP)
mycophenolic acid  (EXP)
myriocin  (EXP)
N,N-dimethylformamide  (ISO)
N-acetyl-L-cysteine  (EXP,ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP)
N-hexadecanoylsphingosine  (ISO)
N-methyl-4-phenylpyridinium  (EXP,ISO)
N-methylnicotinate  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosomorpholine  (ISO)
naloxone  (EXP)
naltrexone  (EXP)
naphthalene  (ISO)
nefazodone  (EXP)
nelfinavir  (EXP)
nickel atom  (ISO)
nickel sulfate  (ISO)
nicotine  (EXP,ISO)
nifedipine  (ISO)
nilotinib  (EXP)
nitric oxide  (EXP)
Nivalenol  (EXP)
nocodazole  (ISO)
Nodularin  (EXP)
Nonidet P-40  (EXP)
nonivamide  (EXP)
Nonylphenol  (ISO)
Norbinaltorphimine  (EXP)
obeticholic acid  (ISO)
ochratoxin A  (EXP,ISO)
okadaic acid  (ISO)
oleanolic acid  (EXP)
oleic acid  (EXP,ISO)
oleuropein  (ISO)
orlistat  (EXP)
ouabain  (EXP)
oxaliplatin  (ISO)
oxidopamine  (ISO)
oxycodone  (EXP,ISO)
ozone  (ISO)
p-menthan-3-ol  (EXP)
paclitaxel  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP,ISO)
patulin  (EXP)
perfluorodecanoic acid  (ISO)
perfluorododecanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (EXP,ISO)
phenethyl caffeate  (ISO)
PhIP  (ISO)
phlorizin  (ISO)
phorbol 13-acetate 12-myristate  (ISO)
pirimicarb  (EXP)
pirinixic acid  (ISO)
platycodin D  (EXP)
plumbagin  (EXP)
poly(guanylic acid)  (ISO)
potassium dichromate  (ISO)
potassium iodide  (EXP)
proanthocyanidin  (ISO)
procymidone  (ISO)
progesterone  (ISO)
propiconazole  (ISO)
pterostilbene  (EXP)
pyrazinecarboxamide  (EXP,ISO)
pyrrolidine dithiocarbamate  (ISO)
quercetin  (EXP,ISO)
rac-lactic acid  (EXP)
resveratrol  (EXP,ISO)
rifampicin  (EXP,ISO)
Riluzole  (EXP)
rimonabant  (EXP)
Roridin A  (ISO)
rotenone  (EXP,ISO)
rottlerin  (EXP)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (EXP)
salubrinal  (EXP,ISO)
salvianolic acid B  (ISO)
saquinavir  (EXP)
SB 203580  (EXP)
SCH 23390  (ISO)
selenomethionine  (ISO)
serpentine asbestos  (EXP,ISO)
silicon dioxide  (EXP,ISO)
silver atom  (EXP)
silver(0)  (EXP)
simvastatin  (EXP)
sirolimus  (EXP,ISO)
SKF-96365 hydrochloride  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (EXP,ISO)
sodium fluoride  (EXP,ISO)
sorafenib  (EXP)
SR 144528  (EXP)
streptozocin  (ISO)
sulforaphane  (ISO)
sulfur dioxide  (EXP,ISO)
sunitinib  (EXP)
T-2 toxin  (EXP,ISO)
tacrolimus hydrate  (ISO)
tamoxifen  (EXP,ISO)
tanespimycin  (EXP)
tauroursodeoxycholic acid  (EXP,ISO)
telmisartan  (ISO)
TEMPO  (ISO)
tert-butyl hydroperoxide  (EXP)
testosterone  (ISO)
tetrachloromethane  (ISO)
thapsigargin  (EXP,ISO)
thiostrepton  (EXP)
thymoquinone  (EXP)
Tiron  (ISO)
titanium dioxide  (ISO)
toluene  (EXP,ISO)
transplatin  (EXP)
triadimefon  (ISO)
tributylstannane  (EXP)
Tributyltin oxide  (ISO)
trichloroethene  (ISO)
trichostatin A  (EXP)
triclocarban  (EXP)
triphenylstannane  (EXP)
Triptolide  (ISO)
triptonide  (ISO)
troglitazone  (EXP,ISO)
tunicamycin  (EXP,ISO)
U-73122  (EXP)
uranium atom  (EXP)
ursodeoxycholic acid  (EXP)
ursolic acid  (EXP)
usnic acid  (EXP)
valproic acid  (EXP,ISO)
vemurafenib  (EXP)
vinclozolin  (ISO)
vincristine  (ISO)
vitamin E  (ISO)
vitexin  (ISO)
vorinostat  (EXP)
wortmannin  (EXP)
xylitol  (EXP)
Z-Val-Phe-H  (ISO)
zearalenone  (ISO)
zinc atom  (EXP,ISO)
zinc oxide  (ISO)
zinc pyrithione  (EXP)
zinc(0)  (EXP,ISO)
zoledronic acid  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
cellular response to antibiotic  (IEA,ISO)
cellular response to calcium ion  (IEA,ISO)
cellular response to cAMP  (IEA,ISO)
cellular response to drug  (IEA,ISO)
cellular response to gamma radiation  (IEA,ISO)
cellular response to glucose starvation  (IDA)
cellular response to interleukin-4  (IEA,ISO)
cellular response to manganese ion  (IEA)
cellular response to nerve growth factor stimulus  (IEA,ISO)
cellular response to unfolded protein  (IBA)
cerebellar Purkinje cell layer development  (IEA)
cerebellum structural organization  (IEA)
chaperone cofactor-dependent protein refolding  (IBA)
endoplasmic reticulum unfolded protein response  (IBA,TAS)
ER overload response  (IEA,ISO)
luteolysis  (IEA,ISO)
maintenance of protein localization in endoplasmic reticulum  (IMP)
negative regulation of apoptotic process  (IMP,TAS)
negative regulation of IRE1-mediated unfolded protein response  (ISS)
negative regulation of protein-containing complex assembly  (ISS)
negative regulation of transforming growth factor beta receptor signaling pathway  (IEA,ISO)
neuron apoptotic process  (IEA,ISO)
neuron differentiation  (IEA,ISO)
positive regulation of cell migration  (IMP)
positive regulation of neuron projection development  (IEA,ISO)
positive regulation of protein ubiquitination  (IEA)
positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress  (TAS)
posttranslational protein targeting to membrane, translocation  (IMP)
protein folding in endoplasmic reticulum  (TAS)
protein refolding  (IBA)
proteolysis involved in cellular protein catabolic process  (ISO)
regulation of ATF6-mediated unfolded protein response  (TAS)
regulation of IRE1-mediated unfolded protein response  (TAS)
regulation of PERK-mediated unfolded protein response  (TAS)
regulation of protein folding in endoplasmic reticulum  (TAS)
response to cocaine  (IEA,ISO)
response to endoplasmic reticulum stress  (ISO)
response to methamphetamine hydrochloride  (IEA,ISO)
response to radiation  (ISO)
stress response to metal ion  (IEA,ISO)
substantia nigra development  (HEP)
toxin transport  (IEA,ISO)
ubiquitin-dependent ERAD pathway  (IBA,TAS)

References

References - curated
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2. Chen HL, etal., Zhen Ci Yan Jiu. 2014 Dec;39(6):431-6.
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4. Deuring JJ, etal., Biochem J. 2012 Jan 1;441(1):87-93.
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7. GOA_HUMAN data from the GO Consortium
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15. Pipeline to import KEGG annotations from KEGG into RGD
16. Pipeline to import SMPDB annotations from SMPDB into RGD
17. RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
18. RGD automated import pipeline for gene-chemical interactions
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22. Sun HL, etal., Exp Clin Endocrinol Diabetes. 2009 Jul;117(7):336-44. Epub 2009 Mar 19.
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24. Tan Z, etal., J Neuroinflammation. 2018 Sep 21;15(1):275. doi: 10.1186/s12974-018-1311-5.
25. Torres-Gonzalez E, etal., Am J Respir Cell Mol Biol. 2012 Jan 6.
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Additional References at PubMed
PMID:1480470   PMID:1602151   PMID:1649196   PMID:1900540   PMID:2294010   PMID:2840249   PMID:3087629   PMID:3122216   PMID:7724523   PMID:7878056   PMID:7906708   PMID:7957306  
PMID:8020977   PMID:8666824   PMID:9006956   PMID:9150946   PMID:9150948   PMID:9305856   PMID:9409741   PMID:9492298   PMID:9885241   PMID:10049727   PMID:10085239   PMID:10197448  
PMID:10397760   PMID:10461883   PMID:10514465   PMID:10588643   PMID:10617616   PMID:10708769   PMID:10760948   PMID:10777498   PMID:10887119   PMID:10906332   PMID:10964507   PMID:10964928  
PMID:10970892   PMID:11013075   PMID:11160188   PMID:11162507   PMID:11162551   PMID:11181571   PMID:11294872   PMID:11476899   PMID:11719466   PMID:11751874   PMID:11752154   PMID:11765911  
PMID:11790298   PMID:11907036   PMID:11932435   PMID:11943137   PMID:12076252   PMID:12097557   PMID:12194978   PMID:12356756   PMID:12359150   PMID:12383251   PMID:12397072   PMID:12411443  
PMID:12471035   PMID:12475965   PMID:12477932   PMID:12480769   PMID:12493773   PMID:12514190   PMID:12516782   PMID:12552023   PMID:12577067   PMID:12621026   PMID:12637535   PMID:12643545  
PMID:12665508   PMID:12713871   PMID:12832005   PMID:12840015   PMID:14685163   PMID:14744259   PMID:15009096   PMID:15077298   PMID:15146195   PMID:15150263   PMID:15166316   PMID:15280358  
PMID:15308636   PMID:15324660   PMID:15456888   PMID:15489334   PMID:15514946   PMID:15525676   PMID:15618547   PMID:15635413   PMID:15657421   PMID:15664986   PMID:15778089   PMID:15817150  
PMID:15899857   PMID:15908432   PMID:15949590   PMID:15952740   PMID:16027165   PMID:16049007   PMID:16051665   PMID:16130169   PMID:16168956   PMID:16169070   PMID:16182273   PMID:16212417  
PMID:16223484   PMID:16236267   PMID:16257961   PMID:16282978   PMID:16329989   PMID:16344560   PMID:16400691   PMID:16428306   PMID:16472112   PMID:16488447   PMID:16497268   PMID:16522924  
PMID:16543232   PMID:16731524   PMID:16912156   PMID:16912197   PMID:17002502   PMID:17062670   PMID:17081065   PMID:17139257   PMID:17184779   PMID:17215244   PMID:17220478   PMID:17380188  
PMID:17431395   PMID:17601350   PMID:17620599   PMID:17640713   PMID:17643375   PMID:17670764   PMID:17683050   PMID:17721549   PMID:17725712   PMID:17728248   PMID:17765891   PMID:17805346  
PMID:17848573   PMID:17906960   PMID:17931354   PMID:17932454   PMID:17936241   PMID:17942541   PMID:17979178   PMID:17991893   PMID:18022401   PMID:18064632   PMID:18083346   PMID:18192872  
PMID:18247557   PMID:18264092   PMID:18268478   PMID:18278507   PMID:18331622   PMID:18343577   PMID:18400946   PMID:18403493   PMID:18411300   PMID:18457437   PMID:18482745   PMID:18502753  
PMID:18556570   PMID:18654987   PMID:18708056   PMID:18708359   PMID:18720263   PMID:18757373   PMID:18776923   PMID:18781276   PMID:18787411   PMID:18790759   PMID:18840615   PMID:18842681  
PMID:18850735   PMID:18923428   PMID:18923430   PMID:18977241   PMID:19014922   PMID:19017364   PMID:19056867   PMID:19097122   PMID:19103594   PMID:19107326   PMID:19128512   PMID:19135240  
PMID:19151922   PMID:19164805   PMID:19165527   PMID:19167051   PMID:19188365   PMID:19193609   PMID:19199708   PMID:19212831   PMID:19228285   PMID:19236758   PMID:19275587   PMID:19287380  
PMID:19296942   PMID:19299420   PMID:19309398   PMID:19343720   PMID:19380743   PMID:19386345   PMID:19411306   PMID:19421146   PMID:19470730   PMID:19482905   PMID:19533686   PMID:19546472  
PMID:19616278   PMID:19626590   PMID:19632185   PMID:19659607   PMID:19671925   PMID:19674193   PMID:19713465   PMID:19718440   PMID:19722195   PMID:19738201   PMID:19741001   PMID:19765186  
PMID:19776128   PMID:19786088   PMID:19815544   PMID:19815549   PMID:19816510   PMID:19823030   PMID:19838160   PMID:19838163   PMID:19842229   PMID:19845896   PMID:19875381   PMID:19946888  
PMID:19950238   PMID:20017148   PMID:20020773   PMID:20028516   PMID:20072656   PMID:20082722   PMID:20085233   PMID:20111909   PMID:20145413   PMID:20171186   PMID:20176102   PMID:20204278  
PMID:20208072   PMID:20213805   PMID:20335166   PMID:20360535   PMID:20371724   PMID:20457808   PMID:20458337   PMID:20467437   PMID:20473863   PMID:20473970   PMID:20477988   PMID:20484513  
PMID:20492754   PMID:20497865   PMID:20506407   PMID:20508642   PMID:20525207   PMID:20605795   PMID:20628775   PMID:20651985   PMID:20664690   PMID:20672702   PMID:20720212   PMID:20735358  
PMID:20739513   PMID:20890123   PMID:20936779   PMID:20979610   PMID:21056970   PMID:21080038   PMID:21081503   PMID:21081666   PMID:21118962   PMID:21137052   PMID:21145461   PMID:21156321  
PMID:21189163   PMID:21199322   PMID:21203488   PMID:21217698   PMID:21221131   PMID:21289099   PMID:21319273   PMID:21343306   PMID:21374734   PMID:21382870   PMID:21389343   PMID:21418596  
PMID:21423176   PMID:21445305   PMID:21467168   PMID:21472681   PMID:21479362   PMID:21503958   PMID:21516372   PMID:21565611   PMID:21597391   PMID:21622563   PMID:21630459   PMID:21642380  
PMID:21673190   PMID:21738476   PMID:21745816   PMID:21763498   PMID:21779363   PMID:21800051   PMID:21825151   PMID:21840908   PMID:21873635   PMID:21890413   PMID:21903092   PMID:21940774  
PMID:21947079   PMID:21947694   PMID:21965664   PMID:21988832   PMID:22004425   PMID:22013210   PMID:22076227   PMID:22079093   PMID:22146569   PMID:22215138   PMID:22234250   PMID:22268729  
PMID:22297694   PMID:22306319   PMID:22425662   PMID:22430489   PMID:22438978   PMID:22446326   PMID:22460328   PMID:22472071   PMID:22495374   PMID:22527697   PMID:22528773   PMID:22543280  
PMID:22546345   PMID:22564965   PMID:22581315   PMID:22613557   PMID:22627132   PMID:22658674   PMID:22689054   PMID:22735594   PMID:22751133   PMID:22752300   PMID:22796945   PMID:22801219  
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PMID:23485528   PMID:23544152   PMID:23569248   PMID:23575540   PMID:23578665   PMID:23703321   PMID:23721263   PMID:23759331   PMID:23760505   PMID:23769672   PMID:23798571   PMID:23818965  
PMID:23874603   PMID:23921388   PMID:23922175   PMID:23956138   PMID:23975754   PMID:23979707   PMID:23990668   PMID:24002052   PMID:24048331   PMID:24080088   PMID:24113185   PMID:24113381  
PMID:24126384   PMID:24155957   PMID:24167599   PMID:24189400   PMID:24239288   PMID:24244333   PMID:24244613   PMID:24314144   PMID:24332808   PMID:24383061   PMID:24457600   PMID:24473200  
PMID:24512104   PMID:24516643   PMID:24526410   PMID:24587347   PMID:24602846   PMID:24654937   PMID:24711643   PMID:24749068   PMID:24756776   PMID:24766948   PMID:24781973   PMID:24795528  
PMID:24810055   PMID:24821775   PMID:24829380   PMID:24853418   PMID:24882382   PMID:24899641   PMID:24924946   PMID:24977433   PMID:24982359   PMID:24992036   PMID:25017472   PMID:25059665  
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PMID:26593250   PMID:26614265   PMID:26618558   PMID:26618866   PMID:26638075   PMID:26641092   PMID:26655470   PMID:26693507   PMID:26735018   PMID:26740125   PMID:26740554   PMID:26752685  
PMID:26760575   PMID:26823144   PMID:26831064   PMID:26939701   PMID:26952514   PMID:27002159   PMID:27004760   PMID:27012209   PMID:27016417   PMID:27025967   PMID:27030672   PMID:27034005  
PMID:27034162   PMID:27129228   PMID:27129294   PMID:27129302   PMID:27130664   PMID:27158335   PMID:27173435   PMID:27182664   PMID:27185209   PMID:27187154   PMID:27238082   PMID:27254284  
PMID:27375898   PMID:27391061   PMID:27462432   PMID:27465491   PMID:27483141   PMID:27502501   PMID:27503909   PMID:27506747   PMID:27545878   PMID:27566407   PMID:27573888   PMID:27591049  
PMID:27593939   PMID:27634156   PMID:27637333   PMID:27684187   PMID:27698188   PMID:27713511   PMID:27751915   PMID:27771165   PMID:27777122   PMID:27779201   PMID:27791469   PMID:27814589  
PMID:27815359   PMID:27822448   PMID:27845899   PMID:27880917   PMID:27881906   PMID:27918543   PMID:27976729   PMID:27986562   PMID:28038712   PMID:28038917   PMID:28052026   PMID:28054532  
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Genomics

Comparative Map Data
HSPA5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl9125,234,853 - 125,241,382 (-)EnsemblGRCh38hg38GRCh38
GRCh389125,234,853 - 125,241,343 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh379127,997,132 - 128,003,622 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369127,036,953 - 127,043,430 (-)NCBINCBI36hg18NCBI36
Build 349125,076,687 - 125,083,163NCBI
Celera998,645,114 - 98,651,649 (-)NCBI
Cytogenetic Map9q33.3NCBI
HuRef997,609,713 - 97,616,253 (-)NCBIHuRef
CHM1_19128,146,874 - 128,153,413 (-)NCBICHM1_1
Hspa5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39234,662,102 - 34,666,541 (+)NCBIGRCm39mm39
GRCm39 Ensembl234,661,982 - 34,667,559 (+)Ensembl
GRCm38234,772,090 - 34,776,529 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl234,771,970 - 34,777,547 (+)EnsemblGRCm38mm10GRCm38
MGSCv37234,627,610 - 34,632,049 (+)NCBIGRCm37mm9NCBIm37
MGSCv36234,594,104 - 34,598,466 (+)NCBImm8
Celera234,472,567 - 34,477,006 (+)NCBICelera
Cytogenetic Map2BNCBI
cM Map222.94NCBI
Hspa5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2318,055,507 - 18,059,969 (+)NCBI
Rnor_6.0 Ensembl313,838,304 - 13,842,762 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0313,838,304 - 13,842,763 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0319,157,874 - 19,162,333 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4313,783,825 - 13,788,022 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1313,680,196 - 13,684,394 (+)NCBI
Celera312,776,654 - 12,781,113 (+)NCBICelera
RH 3.4 Map3151.7RGD
Cytogenetic Map3p11NCBI
Hspa5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554193,055,420 - 3,062,131 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554193,055,420 - 3,060,208 (+)NCBIChiLan1.0ChiLan1.0
HSPA5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.19124,865,211 - 124,870,458 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9124,865,211 - 124,870,458 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0996,351,645 - 96,356,761 (-)NCBIMhudiblu_PPA_v0panPan3
HSPA5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1957,850,870 - 57,855,607 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl957,850,922 - 57,855,257 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha957,050,544 - 57,055,478 (+)NCBI
ROS_Cfam_1.0958,771,363 - 58,776,290 (+)NCBI
UMICH_Zoey_3.1957,529,524 - 57,534,454 (+)NCBI
UNSW_CanFamBas_1.0957,846,243 - 57,851,163 (+)NCBI
UU_Cfam_GSD_1.0957,936,913 - 57,941,842 (+)NCBI
Hspa5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947193,579,938 - 193,584,190 (-)NCBI
SpeTri2.0NW_00493648713,348,465 - 13,352,717 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HSPA5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1265,930,045 - 265,934,904 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11265,930,044 - 265,934,959 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21299,754,103 - 299,758,617 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap1q2.10-q2.13NCBI
HSPA5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11212,920,705 - 12,925,888 (+)NCBI
ChlSab1.1 Ensembl1212,920,710 - 12,927,431 (+)Ensembl
Vero_WHO_p1.0NW_0236660793,184,743 - 3,190,031 (-)NCBI
Hspa5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247609,986,529 - 9,991,261 (+)NCBI

Position Markers
RH102504  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh379127,997,180 - 127,997,357UniSTSGRCh37
Build 369127,037,001 - 127,037,178RGDNCBI36
Celera998,645,167 - 98,645,344RGD
Cytogenetic Map9q33.3UniSTS
HuRef997,609,766 - 97,609,943UniSTS
GeneMap99-GB4 RH Map9383.29UniSTS
D2Wsu17e  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37139,176,669 - 39,176,879UniSTSGRCh37
GRCh379127,998,557 - 127,998,766UniSTSGRCh37
Build 36138,949,256 - 38,949,466RGDNCBI36
Celera998,646,545 - 98,646,754UniSTS
Celera137,455,287 - 37,455,497RGD
HuRef997,611,144 - 97,611,353UniSTS
HuRef137,295,242 - 37,295,452UniSTS
PMC108893P1  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh379128,003,406 - 128,003,627UniSTSGRCh37
Build 369127,043,227 - 127,043,448RGDNCBI36
Celera998,651,394 - 98,651,615RGD
Cytogenetic Map9q33.3UniSTS
HuRef997,615,993 - 97,616,214UniSTS
HSPA5_988  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh379127,998,540 - 127,999,338UniSTSGRCh37
Build 369127,038,361 - 127,039,159RGDNCBI36
Celera998,646,528 - 98,647,326RGD
HuRef997,611,127 - 97,611,925UniSTS
D9S1138  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh379127,998,566 - 127,998,740UniSTSGRCh37
GRCh37139,176,695 - 39,176,870UniSTSGRCh37
Build 36138,949,282 - 38,949,457RGDNCBI36
Celera137,455,313 - 37,455,488RGD
Celera998,646,554 - 98,646,728UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map9q33.3UniSTS
HuRef137,295,268 - 37,295,443UniSTS
HuRef997,611,153 - 97,611,327UniSTS
GeneMap99-GB4 RH Map9389.68UniSTS
Whitehead-RH Map9462.6UniSTS
Whitehead-YAC Contig Map9 UniSTS
RH94472  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh379127,998,544 - 127,998,705UniSTSGRCh37
Celera998,646,532 - 98,646,693UniSTS
HuRef997,611,131 - 97,611,292UniSTS
D10S275  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map17q24.2UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map13q12.13UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map1p35.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map14q24UniSTS
Cytogenetic Map14q22-q24UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map16q12.1UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map10p11UniSTS
Cytogenetic Map1p13.1UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map6q24UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map9q13-q21UniSTS
Cytogenetic Map3p25UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map9q22UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic MapXp22.2-p22.1UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map20pter-q11.23UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map10p12.3UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map3q27UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map3q26.3UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map3q13.31UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map1q24-q25.3UniSTS
Cytogenetic Map7p11UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map1q21.2-q21.3UniSTS
Cytogenetic Map6q25.2-q27UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map12q24.32UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map13q12-q14UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map2q24.1UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map14q31UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map11p14.3UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map4q13UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map7p14.2UniSTS
Cytogenetic Map6q24.3UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map6q12-q13UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map9q34.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map18q23UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map2p14UniSTS

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR181A2hsa-miR-181a-5pOncomiRDBexternal_infoNANA23085757
MIR122hsa-miR-122-5pTarbaseexternal_infoOtherPOSITIVE
MIR199A1hsa-miR-199a-5pOncomiRDBexternal_infoNANA23085757
MIR181A1hsa-miR-181a-5pOncomiRDBexternal_infoNANA23085757
MIR30Dhsa-miR-30d-5pOncomiRDBexternal_infoNANA23085757

Predicted Target Of
Summary Value
Count of predictions:674
Count of miRNA genes:482
Interacting mature miRNAs:537
Transcripts:ENST00000324460
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 66 102 178 28 68 27 84 19 40 13