Hspa1l (heat shock protein 1-like) - Rat Genome Database

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Gene: Hspa1l (heat shock protein 1-like) Mus musculus
Analyze
Symbol: Hspa1l
Name: heat shock protein 1-like
RGD ID: 10741
MGI Page MGI
Description: Predicted to have several functions, including ATP binding activity; misfolded protein binding activity; and protein folding chaperone. Involved in binding activity of sperm to zona pellucida. Localizes to cell body and zona pellucida receptor complex. Predicted to colocalize with COP9 signalosome. Is expressed in several structures, including alimentary system; brain; genitourinary system; integumental system; and limb segment. Human ortholog(s) of this gene implicated in Kawasaki disease; major depressive disorder; schizophrenia; systemic lupus erythematosus; and uveitis. Orthologous to human HSPA1L (heat shock protein family A (Hsp70) member 1 like); PARTICIPATES IN antigen processing and presentation pathway; endocytosis pathway; Endoplasmic Reticulum-associated degradation pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 3,3',5,5'-tetrabromobisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 70kD; heat shock 70 kDa protein 1-like; heat shock 70 kDa protein 1L; heat shock 70 kDa-like protein 1; heat shock 70kDa protein 1-like; heat shock protein cognate 70, testis; heat shock-related protein hsc70t; Hsc70; Hsc70t; inducible heat shock protein 70; MGC150263; MGC150264; Msh; Msh5; spermatid-specific heat shock protein 70
RGD Orthologs
Human
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm8107  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391735,191,679 - 35,198,204 (+)NCBIGRCm39mm39
GRCm39 Ensembl1735,191,679 - 35,198,261 (+)Ensembl
GRCm381734,972,703 - 34,979,228 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1734,972,703 - 34,979,285 (+)EnsemblGRCm38mm10GRCm38
MGSCv371735,109,648 - 35,116,173 (+)NCBIGRCm37mm9NCBIm37
MGSCv361734,580,788 - 34,587,281 (+)NCBImm8
Celera1738,068,927 - 38,075,454 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.51NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
17alpha-ethynylestradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxynon-2-enal  (ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
amphibole asbestos  (ISO)
antirheumatic drug  (ISO)
apigenin  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
Aurin  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (ISO)
C60 fullerene  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
carbonyl cyanide p-trifluoromethoxyphenylhydrazone  (ISO)
choline  (ISO)
clofibrate  (EXP)
cobalt atom  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
crocin-1  (ISO)
crotonaldehyde  (ISO)
D-penicillamine  (ISO)
decabromodiphenyl ether  (ISO)
desferrioxamine B  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
diethyl maleate  (ISO)
diethylstilbestrol  (EXP)
disulfiram  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
ethanol  (ISO)
ferric ammonium citrate  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
gemcitabine  (ISO)
hemin  (ISO)
indometacin  (ISO)
iron atom  (ISO)
iron(0)  (ISO)
isoprenaline  (EXP,ISO)
L-methionine  (ISO)
L-serine  (ISO)
linalool  (ISO)
lithium atom  (ISO)
lithium hydride  (ISO)
mercury atom  (ISO)
mercury(0)  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
monocrotaline  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
nickel atom  (ISO)
nitroprusside  (ISO)
omeprazole  (ISO)
organoselenium compound  (ISO)
oxidopamine  (ISO)
p-chloromercuribenzoic acid  (ISO)
paclitaxel  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
phenytoin  (EXP)
pioglitazone  (ISO)
pirinixic acid  (EXP)
quercitrin  (ISO)
rifampicin  (EXP)
rotenone  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (EXP,ISO)
styrene  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
tamoxifen  (EXP)
teriflunomide  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (ISO)
thapsigargin  (ISO)
thimerosal  (ISO)
thiostrepton  (ISO)
titanium dioxide  (EXP)
trichostatin A  (ISO)
triptonide  (EXP)
troglitazone  (ISO)
Tungsten carbide  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
zinc atom  (ISO)
zinc pyrithione  (ISO)
zinc sulfate  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Additional References at PubMed
PMID:2302214   PMID:7806281   PMID:7988674   PMID:7993390   PMID:8026864   PMID:8199408   PMID:8428774   PMID:8449501   PMID:8486356   PMID:8630049   PMID:8954773   PMID:8974842  
PMID:9271633   PMID:9551980   PMID:9685725   PMID:10092118   PMID:10199925   PMID:10349636   PMID:10556423   PMID:10871872   PMID:11042159   PMID:11076861   PMID:11389549   PMID:11733032  
PMID:11797099   PMID:12477932   PMID:14610273   PMID:14656967   PMID:16024815   PMID:16141072   PMID:16141073   PMID:16565291   PMID:17309103   PMID:19015242   PMID:19299493   PMID:19423573  
PMID:19520787   PMID:21487003   PMID:21677750   PMID:21873635   PMID:21880732   PMID:24045954   PMID:27477512   PMID:27649575   PMID:30068389   PMID:30333137   PMID:30457570   PMID:31642047  
PMID:32325033  


Genomics

Comparative Map Data
Hspa1l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391735,191,679 - 35,198,204 (+)NCBIGRCm39mm39
GRCm39 Ensembl1735,191,679 - 35,198,261 (+)Ensembl
GRCm381734,972,703 - 34,979,228 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1734,972,703 - 34,979,285 (+)EnsemblGRCm38mm10GRCm38
MGSCv371735,109,648 - 35,116,173 (+)NCBIGRCm37mm9NCBIm37
MGSCv361734,580,788 - 34,587,281 (+)NCBImm8
Celera1738,068,927 - 38,075,454 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.51NCBI
HSPA1L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl631,809,619 - 31,815,283 (-)EnsemblGRCh38hg38GRCh38
GRCh38631,809,619 - 31,815,283 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37631,777,396 - 31,783,060 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36631,885,375 - 31,890,814 (-)NCBINCBI36hg18NCBI36
Build 34631,885,374 - 31,890,786NCBI
Celera633,375,646 - 33,381,084 (-)NCBI
Cytogenetic Map6p21.33NCBI
HuRef631,563,804 - 31,569,242 (-)NCBIHuRef
CHM1_1631,779,530 - 31,784,969 (-)NCBICHM1_1
Hspa1l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2203,848,843 - 3,855,571 (-)NCBI
Rnor_6.0 Ensembl204,959,294 - 4,964,963 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0204,879,998 - 4,965,191 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0207,032,557 - 7,038,454 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera204,171,282 - 4,177,670 (+)NCBICelera
Cytogenetic Map20p12NCBI
HSPA1L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1632,357,626 - 32,370,055 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl632,358,054 - 32,359,979 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0631,470,745 - 31,483,615 (-)NCBIMhudiblu_PPA_v0panPan3
LOC474850
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1121,281,164 - 1,285,010 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl121,281,472 - 1,285,440 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha121,416,835 - 1,420,649 (-)NCBI
ROS_Cfam_1.0121,424,019 - 1,427,833 (-)NCBI
UMICH_Zoey_3.1121,283,032 - 1,286,847 (-)NCBI
UNSW_CanFamBas_1.0121,350,176 - 1,353,991 (-)NCBI
UU_Cfam_GSD_1.0121,414,602 - 1,418,416 (-)NCBI
LOC101956412
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494635,816,113 - 35,825,083 (-)NCBI
SpeTri2.0NW_0049367271,735,880 - 1,745,231 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HSPA1L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl723,909,960 - 23,921,723 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1723,909,960 - 23,938,678 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
LOC103221744
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11740,206,365 - 40,211,996 (+)NCBI
Vero_WHO_p1.0NW_02366604431,724,065 - 31,729,529 (-)NCBI
Hspa1l
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475424,403,438 - 24,423,477 (+)NCBI

Position Markers
Hspa1l  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,977,171 - 34,977,483UniSTSGRCm38
MGSCv371735,114,116 - 35,114,428UniSTSGRCm37
Celera1738,073,397 - 38,073,709UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.95UniSTS
cM Map1718.95UniSTS
PMC117401P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,971,100 - 34,971,579UniSTSGRCm38
GRCm381734,958,182 - 34,958,661UniSTSGRCm38
MGSCv371735,095,127 - 35,095,606UniSTSGRCm37
MGSCv371735,108,045 - 35,108,524UniSTSGRCm37
Celera1738,054,411 - 38,054,890UniSTS
Celera1738,067,324 - 38,067,803UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.95UniSTS
cM Map1718.9UniSTS
cM Map1718.95UniSTS
PMC314357P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,971,069 - 34,971,557UniSTSGRCm38
GRCm381734,958,151 - 34,958,639UniSTSGRCm38
MGSCv371735,095,096 - 35,095,584UniSTSGRCm37
MGSCv371735,108,014 - 35,108,502UniSTSGRCm37
Celera1738,054,380 - 38,054,868UniSTS
Celera1738,067,293 - 38,067,781UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.95UniSTS
cM Map1718.9UniSTS
cM Map1718.95UniSTS
D17Nki3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,976,054 - 34,976,182UniSTSGRCm38
MGSCv371735,112,999 - 35,113,127UniSTSGRCm37
Celera1738,072,279 - 38,072,408UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.96UniSTS
D17Nki4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,976,408 - 34,976,486UniSTSGRCm38
MGSCv371735,113,353 - 35,113,431UniSTSGRCm37
Celera1738,072,634 - 38,072,712UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.96UniSTS
Hspa1l  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17B1UniSTS
Hspa1l  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,978,991 - 34,979,195UniSTSGRCm38
MGSCv371735,115,936 - 35,116,140UniSTSGRCm37
Celera1738,075,217 - 38,075,421UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.95UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17312791337128037Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17392461548559063Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined480447745359340Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17480447746158776Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17480447747574740Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined480447765330362Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17667496240674962Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17836594042366175Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17836594042366175Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined17986241186688972Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171065914544659245Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1098759739053168Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1166699745667145Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171177921045779210Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171206732483054339Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171223281346232813Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171242798746427987Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171390439847904522Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171484267848842786Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171484267848842786Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171484267848842786Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171484267848842786Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171660074750600869Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171660074750600869Mouse
1301505Tir1_mtrypanosome infection response 1 (mouse)Not determined171660074750600869Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171681096950811104Mouse
1302042Acsns3_mAngiostrongylus costaricensis nematode susceptibility 3 (mouse)Not determined171724323451243371Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171724323451243371Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171724323451243371Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171724323451243371Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171724323451243371Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171795643651959238Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171819938152202007Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171820316552205351Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171883413352834133Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172430185958301973Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172485760955405969Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172536594043665344Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172574029459740461Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172618203852604676Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172628636340794146Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172657408160574223Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172749681845311728Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172750432261504322Mouse
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172765914543574223Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172831148062311728Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined172982162963821740Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3072257564722705Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3076892947728778Mouse
1300692Blmpf1_mbleomycin-induced pulmonary fibrosis 1 (mouse)Not determined173184267837333884Mouse
25394538Skmw84_mskeletal muscle weight 84, TA (mouse)173244145235301060Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173290000053800000Mouse
1302189Dps3_mdelta power in slow-wave sleep 3 (mouse)Not determined173360074735939288Mouse
1300885Mbis4_mMycobacterium bovis-induced systemic lupus erythematosus 4 (mouse)Not determined173495684169858931Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:126
Count of miRNA genes:117
Interacting mature miRNAs:120
Transcripts:ENSMUST00000007248
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_013558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC087117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF109905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF109906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF397035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF397036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK006518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC129894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC129895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY099756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU406961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU463845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D85732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D85733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU549780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU622851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L27086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M32218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000007248   ⟹   ENSMUSP00000007248
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1734,972,703 - 34,979,285 (+)Ensembl
RefSeq Acc Id: NM_013558   ⟹   NP_038586
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,191,679 - 35,198,204 (+)NCBI
GRCm381734,972,703 - 34,979,228 (+)ENTREZGENE
MGSCv371735,109,648 - 35,116,173 (+)RGD
Celera1738,068,927 - 38,075,454 (+)RGD
cM Map17 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_038586   ⟸   NM_013558
- UniProtKB: P16627 (UniProtKB/Swiss-Prot),   A1L347 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000007248   ⟸   ENSMUST00000007248

Promoters
RGD ID:13675770
Promoter ID:EPDNEW_M22034
Type:initiation region
Name:Hspa1l_1
Description:Mus musculus heat shock protein 1-like , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381734,972,716 - 34,972,776EPDNEW
RGD ID:6828250
Promoter ID:MM_KWN:23253
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung
Transcripts:OTTMUST00000039162
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361735,108,959 - 35,109,459 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:96231 AgrOrtholog
Ensembl Genes ENSMUSG00000007033 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000007248 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000007248 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.1270.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.34.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ATPase_NBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Heat_shock_70_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP70_C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP70_peptide-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Hsp_70_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:15482 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:96231 ENTREZGENE
NCBI Gene 15482 ENTREZGENE
PANTHER PTHR19375 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam HSP70 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Hspa1l PhenoGen
PROSITE HSP70_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP70_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP70_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF100920 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF100934 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF53067 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A1L347 ENTREZGENE, UniProtKB/TrEMBL
  HS71L_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary O88686 UniProtKB/Swiss-Prot
  Q61693 UniProtKB/Swiss-Prot