Hspa1l (heat shock protein 1-like) - Rat Genome Database

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Gene: Hspa1l (heat shock protein 1-like) Mus musculus
Analyze
Symbol: Hspa1l
Name: heat shock protein 1-like
RGD ID: 10741
MGI Page MGI
Description: Predicted to enable several functions, including ATP hydrolysis activity; ubiquitin protein ligase binding activity; and unfolded protein binding activity. Acts upstream of or within binding activity of sperm to zona pellucida. Located in cell body. Part of zona pellucida receptor complex. Is expressed in several structures, including alimentary system; brain; genitourinary system; integumental system; and limb segment. Human ortholog(s) of this gene implicated in Kawasaki disease; major depressive disorder; schizophrenia; systemic lupus erythematosus; and uveitis. Orthologous to human HSPA1L (heat shock protein family A (Hsp70) member 1 like).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 70kD; heat shock 70 kDa protein 1-like; heat shock 70 kDa protein 1L; heat shock 70 kDa-like protein 1; heat shock 70kDa protein 1-like; heat shock protein cognate 70, testis; heat shock-related protein hsc70t; Hsc70; Hsc70t; inducible heat shock protein 70; MGC150263; MGC150264; Msh; Msh5; spermatid-specific heat shock protein 70
RGD Orthologs
Human
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm8107  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391735,191,679 - 35,198,204 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1735,191,679 - 35,198,261 (+)EnsemblGRCm39 Ensembl
GRCm381734,972,703 - 34,979,228 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1734,972,703 - 34,979,285 (+)EnsemblGRCm38mm10GRCm38
MGSCv371735,109,648 - 35,116,173 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361734,580,788 - 34,587,281 (+)NCBIMGSCv36mm8
Celera1738,068,927 - 38,075,454 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.51NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
17alpha-ethynylestradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxynon-2-enal  (ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (EXP)
amphibole asbestos  (ISO)
antirheumatic drug  (ISO)
apigenin  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
Aurin  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bromoacetate  (ISO)
C60 fullerene  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
carbonyl cyanide p-trifluoromethoxyphenylhydrazone  (ISO)
CGP 52608  (ISO)
choline  (ISO)
clofibrate  (EXP)
cobalt atom  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
crocin-1  (ISO)
crotonaldehyde  (ISO)
D-glucose  (EXP)
D-penicillamine  (ISO)
decabromodiphenyl ether  (ISO)
deoxynivalenol  (ISO)
desferrioxamine B  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
diethyl maleate  (ISO)
diethylstilbestrol  (EXP)
disulfiram  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
ethanol  (ISO)
ferric ammonium citrate  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
fructose  (EXP)
gemcitabine  (ISO)
gentamycin  (ISO)
glucose  (EXP)
hemin  (ISO)
indometacin  (ISO)
iron atom  (ISO)
iron(0)  (ISO)
isoprenaline  (EXP,ISO)
ivermectin  (ISO)
L-methionine  (ISO)
L-serine  (ISO)
Licochalcone B  (ISO)
linalool  (ISO)
lithium atom  (ISO)
lithium hydride  (ISO)
mercury atom  (ISO)
mercury(0)  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
monocrotaline  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
nickel atom  (ISO)
nitroprusside  (ISO)
omeprazole  (ISO)
organoselenium compound  (ISO)
oxidopamine  (ISO)
p-chloromercuribenzoic acid  (ISO)
paclitaxel  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
phenytoin  (EXP)
pioglitazone  (ISO)
pirinixic acid  (EXP)
quercitrin  (ISO)
rifampicin  (EXP)
rotenone  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (EXP,ISO)
styrene  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
tamoxifen  (EXP)
teriflunomide  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (ISO)
thapsigargin  (ISO)
thimerosal  (ISO)
thiostrepton  (ISO)
titanium dioxide  (EXP)
trichloroethene  (ISO)
trichostatin A  (ISO)
triptonide  (EXP)
troglitazone  (ISO)
Tungsten carbide  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
zinc atom  (ISO)
zinc pyrithione  (ISO)
zinc sulfate  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Heat shock protein 70 gene polymorphisms in sudden sensorineural hearing loss. Chien CY, etal., Audiol Neurootol. 2012;17(6):381-5. doi: 10.1159/000341815. Epub 2012 Aug 22.
2. Polymorphisms in the Hsp70 gene locus are genetically associated with systemic lupus erythematosus. Furnrohr BG, etal., Ann Rheum Dis. 2010 Nov;69(11):1983-9. Epub 2010 May 24.
3. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
4. Association analysis of heat shock protein 70 gene polymorphisms in schizophrenia. Kim JJ, etal., Eur Arch Psychiatry Clin Neurosci. 2008 Jun;258(4):239-44.
5. HLA class III genes involvement in Kawasaki disease: a case-control study in Caucasian population. Maggioli E, etal., Int J Immunogenet. 2014 Feb;41(1):44-53. doi: 10.1111/iji.12077. Epub 2013 Jul 22.
6. Predisposition to abacavir hypersensitivity conferred by HLA-B*5701 and a haplotypic Hsp70-Hom variant. Martin AM, etal., Proc Natl Acad Sci U S A. 2004 Mar 23;101(12):4180-5. Epub 2004 Mar 15.
7. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
8. MGDs mouse GO annotations MGD data from the GO Consortium
9. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
10. Heat-shock protein-70 genes and response to antidepressants in major depression. Pae CU, etal., Prog Neuropsychopharmacol Biol Psychiatry. 2007 Jun 30;31(5):1006-11. Epub 2007 Feb 27.
11. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
12. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
13. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
14. Association between heat shock protein 70/Hom genetic polymorphisms and uveitis in patients with sarcoidosis. Spagnolo P, etal., Invest Ophthalmol Vis Sci. 2007 Jul;48(7):3019-25.
15. Association of hsp70 polymorphisms with risk of noise-induced hearing loss in Chinese automobile workers. Yang M, etal., Cell Stress Chaperones. 2006 Autumn;11(3):233-9.
Additional References at PubMed
PMID:2302214   PMID:7806281   PMID:7988674   PMID:7993390   PMID:8026864   PMID:8199408   PMID:8428774   PMID:8449501   PMID:8486356   PMID:8630049   PMID:8954773   PMID:8974842  
PMID:9271633   PMID:9551980   PMID:9685725   PMID:10092118   PMID:10199925   PMID:10349636   PMID:10556423   PMID:10871872   PMID:11042159   PMID:11076861   PMID:11389549   PMID:11733032  
PMID:11797099   PMID:12477932   PMID:14610273   PMID:14656967   PMID:16024815   PMID:16141072   PMID:16141073   PMID:16565291   PMID:17309103   PMID:19015242   PMID:19299493   PMID:19423573  
PMID:19520787   PMID:21487003   PMID:21677750   PMID:21873635   PMID:21880732   PMID:24045954   PMID:27477512   PMID:27649575   PMID:30068389   PMID:30333137   PMID:30457570   PMID:31642047  
PMID:32231871   PMID:32325033   PMID:33742129  


Genomics

Comparative Map Data
Hspa1l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391735,191,679 - 35,198,204 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1735,191,679 - 35,198,261 (+)EnsemblGRCm39 Ensembl
GRCm381734,972,703 - 34,979,228 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1734,972,703 - 34,979,285 (+)EnsemblGRCm38mm10GRCm38
MGSCv371735,109,648 - 35,116,173 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361734,580,788 - 34,587,281 (+)NCBIMGSCv36mm8
Celera1738,068,927 - 38,075,454 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.51NCBI
HSPA1L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38631,809,619 - 31,815,283 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl631,809,619 - 31,815,283 (-)EnsemblGRCh38hg38GRCh38
GRCh37631,777,396 - 31,783,060 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36631,885,375 - 31,890,814 (-)NCBINCBI36Build 36hg18NCBI36
Build 34631,885,374 - 31,890,786NCBI
Celera633,375,646 - 33,381,084 (-)NCBICelera
Cytogenetic Map6p21.33NCBI
HuRef631,563,804 - 31,569,242 (-)NCBIHuRef
CHM1_1631,779,530 - 31,784,969 (-)NCBICHM1_1
T2T-CHM13v2.0631,662,676 - 31,668,340 (-)NCBIT2T-CHM13v2.0
Hspa1l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8203,853,496 - 3,860,223 (-)NCBIGRCr8
mRatBN7.2203,848,843 - 3,855,571 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl203,848,843 - 3,855,571 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx204,548,331 - 4,555,029 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0203,910,388 - 3,917,087 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0204,448,330 - 4,454,924 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0204,879,998 - 4,965,191 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl204,959,294 - 4,964,963 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0207,032,557 - 7,038,454 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera204,171,282 - 4,177,670 (+)NCBICelera
Cytogenetic Map20p12NCBI
HSPA1L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2546,286,601 - 46,299,239 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1642,248,104 - 42,260,544 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0631,470,745 - 31,483,615 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1632,357,626 - 32,370,055 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl632,358,054 - 32,359,979 (-)Ensemblpanpan1.1panPan2
LOC474850
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1121,281,164 - 1,285,010 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl121,281,472 - 1,285,440 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha121,416,835 - 1,420,649 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0121,424,019 - 1,427,833 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl121,423,961 - 1,428,295 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1121,283,032 - 1,286,847 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0121,350,176 - 1,353,991 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0121,414,602 - 1,418,416 (-)NCBIUU_Cfam_GSD_1.0
LOC101956412
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494635,816,113 - 35,825,083 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367271,736,243 - 1,745,231 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367271,735,880 - 1,745,231 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HSPA1L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl723,909,960 - 23,914,629 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1723,909,960 - 23,938,678 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
LOC103221744
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11740,206,365 - 40,211,996 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1740,209,754 - 40,211,676 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604431,724,065 - 31,729,529 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hspa1l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475424,416,738 - 24,424,613 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475424,403,438 - 24,423,477 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:126
Count of miRNA genes:117
Interacting mature miRNAs:120
Transcripts:ENSMUST00000007248
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17858491442585149Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17858491442585149Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171087811944878219Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1120648439364059Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1188597145886119Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171199818445998184Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171412337248123496Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171506165249061760Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171506165249061760Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171506165249061760Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171506165249061760Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171681972150819843Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171681972150819843Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171702994351030078Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171746220851462345Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171746220851462345Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171746220851462345Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171746220851462345Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171817541252178214Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171841835752420983Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171842214152424327Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171914502553145025Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172461275058612864Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172507658355712970Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172558491443976235Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172605118560051352Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172640101252911704Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172650533741105037Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172688497260885114Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172771579245622654Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172781520961815209Mouse
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172787811943885114Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172862240662622654Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined173013255564132666Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3098790348039703Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3103350065033630Mouse
1300692Blmpf1_mbleomycin-induced pulmonary fibrosis 1 (mouse)Not determined173206165237644775Mouse
25394538Skmw84_mskeletal muscle weight 84, TA (mouse)173266042635520036Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173311897454107028Mouse
1302189Dps3_mdelta power in slow-wave sleep 3 (mouse)Not determined173381972136250180Mouse
1300885Mbis4_mMycobacterium bovis-induced systemic lupus erythematosus 4 (mouse)Not determined173517581770165926Mouse

Markers in Region
Hspa1l  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,977,171 - 34,977,483UniSTSGRCm38
MGSCv371735,114,116 - 35,114,428UniSTSGRCm37
Celera1738,073,397 - 38,073,709UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.95UniSTS
cM Map1718.95UniSTS
PMC117401P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,971,100 - 34,971,579UniSTSGRCm38
GRCm381734,958,182 - 34,958,661UniSTSGRCm38
MGSCv371735,095,127 - 35,095,606UniSTSGRCm37
MGSCv371735,108,045 - 35,108,524UniSTSGRCm37
Celera1738,054,411 - 38,054,890UniSTS
Celera1738,067,324 - 38,067,803UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.95UniSTS
cM Map1718.9UniSTS
cM Map1718.95UniSTS
PMC314357P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,971,069 - 34,971,557UniSTSGRCm38
GRCm381734,958,151 - 34,958,639UniSTSGRCm38
MGSCv371735,095,096 - 35,095,584UniSTSGRCm37
MGSCv371735,108,014 - 35,108,502UniSTSGRCm37
Celera1738,054,380 - 38,054,868UniSTS
Celera1738,067,293 - 38,067,781UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.95UniSTS
cM Map1718.9UniSTS
cM Map1718.95UniSTS
D17Nki3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,976,054 - 34,976,182UniSTSGRCm38
MGSCv371735,112,999 - 35,113,127UniSTSGRCm37
Celera1738,072,279 - 38,072,408UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.96UniSTS
D17Nki4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,976,408 - 34,976,486UniSTSGRCm38
MGSCv371735,113,353 - 35,113,431UniSTSGRCm37
Celera1738,072,634 - 38,072,712UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.96UniSTS
Hspa1l  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17B1UniSTS
Hspa1l  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,978,991 - 34,979,195UniSTSGRCm38
MGSCv371735,115,936 - 35,116,140UniSTSGRCm37
Celera1738,075,217 - 38,075,421UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.95UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_013558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC087117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF109905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF109906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF397035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF397036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK006518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC129894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC129895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY099756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU406961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU463845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D85732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D85733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU549780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU622851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L27086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M32218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000007248   ⟹   ENSMUSP00000007248
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,191,679 - 35,198,261 (+)Ensembl
GRCm38.p6 Ensembl1734,972,703 - 34,979,285 (+)Ensembl
RefSeq Acc Id: NM_013558   ⟹   NP_038586
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,191,679 - 35,198,204 (+)NCBI
GRCm381734,972,703 - 34,979,228 (+)ENTREZGENE
MGSCv371735,109,648 - 35,116,173 (+)RGD
Celera1738,068,927 - 38,075,454 (+)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_038586   ⟸   NM_013558
- UniProtKB: O88686 (UniProtKB/Swiss-Prot),   Q61693 (UniProtKB/Swiss-Prot),   P16627 (UniProtKB/Swiss-Prot),   A1L347 (UniProtKB/TrEMBL),   B2CSK2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000007248   ⟸   ENSMUST00000007248

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P16627-F1-model_v2 AlphaFold P16627 1-641 view protein structure

Promoters
RGD ID:13675770
Promoter ID:EPDNEW_M22034
Type:initiation region
Name:Hspa1l_1
Description:Mus musculus heat shock protein 1-like , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381734,972,716 - 34,972,776EPDNEW
RGD ID:6828250
Promoter ID:MM_KWN:23253
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung
Transcripts:OTTMUST00000039162
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361735,108,959 - 35,109,459 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:96231 AgrOrtholog
Ensembl Genes ENSMUSG00000007033 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000007248 ENTREZGENE
  ENSMUST00000007248.5 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.1270.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.30.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.420.40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ATPase_NBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Heat_shock_70_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP70_C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP70_peptide-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Hsp_70_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:15482 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:96231 ENTREZGENE
NCBI Gene 15482 ENTREZGENE
PANTHER HEAT SHOCK 70 KDA PROTEIN 1-LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR19375 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam HSP70 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Hspa1l PhenoGen
PRINTS HEATSHOCK70 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE HSP70_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP70_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HSP70_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF100920 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF100934 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF53067 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A1L347 ENTREZGENE, UniProtKB/TrEMBL
  B2CSK2 ENTREZGENE, UniProtKB/TrEMBL
  HS71L_MOUSE UniProtKB/Swiss-Prot
  O88686 ENTREZGENE
  P16627 ENTREZGENE
  Q61693 ENTREZGENE
UniProt Secondary O88686 UniProtKB/Swiss-Prot
  Q61693 UniProtKB/Swiss-Prot