CXCL10 (C-X-C motif chemokine ligand 10) - Rat Genome Database

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Gene: CXCL10 (C-X-C motif chemokine ligand 10) Canis lupus familiaris
Analyze
Symbol: CXCL10
Name: C-X-C motif chemokine ligand 10
RGD ID: 12109165
Description: ENCODES a protein that exhibits chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cellular response to heat (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Acute-On-Chronic Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN extracellular space (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: C-X-C motif chemokine 10; chemokine (C-X-C motif) ligand 10; CXC chemokine ligand 10; small-inducible cytokine B10
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.132598,406 - 599,925 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl32597,987 - 599,979 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3241,282,571 - 41,284,090 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.032623,230 - 624,745 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl32622,462 - 624,803 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.132622,982 - 624,501 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.032577,290 - 578,808 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03239,590,894 - 39,592,413 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 108 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CXCL10DogAcute Liver Failure treatmentISOCxcl10 (Mus musculus)9068941 RGDPMID:23227188 and REF_RGD_ID:27095895
CXCL10DogAcute-On-Chronic Liver Failure susceptibilityISOCXCL10 (Homo sapiens)9068941associated with liver cirrhosisRGDPMID:29105936 and REF_RGD_ID:27095953
CXCL10Dogadult respiratory distress syndrome  ISOCxcl10 (Rattus norvegicus)9068941 RGDPMID:9288136 and REF_RGD_ID:2311389
CXCL10Dogasthma  ISOCXCL10 (Homo sapiens)9068941protein:decreased expression:plasmaRGDPMID:16602032 more ...
CXCL10Dogasthma  ISOCxcl10 (Mus musculus)9068941 RGDPMID:11994485 and REF_RGD_ID:5135452
CXCL10Dogbacterial pneumonia severityISOCxcl10 (Mus musculus)9068941 RGDPMID:16299319 and REF_RGD_ID:5135458
CXCL10Dogbacterial pneumonia  ISOCxcl10 (Mus musculus)9068941 RGDPMID:15618188 and REF_RGD_ID:5135459
CXCL10Dogboutonneuse fever  ISOCxcl10 (Mus musculus)9068941 RGDPMID:14507644 and REF_RGD_ID:5135450
CXCL10Dogbrain infarction  ISOCxcl10 (Rattus norvegicus)9068941protein:increased expression:brain (rat)RGDPMID:19895873 and REF_RGD_ID:2325193
CXCL10Dogbrain ischemia  ISOCxcl10 (Rattus norvegicus)9068941mRNA:increased expression:brainRGDPMID:17549754 and REF_RGD_ID:2311381
CXCL10Dogbronchiolitis obliterans  ISOCXCL10 (Homo sapiens)9068941protein:increased expression:respiratory system fluid/secretionRGDPMID:12097412 and REF_RGD_ID:5135451
CXCL10Dogbronchiolitis obliterans  ISOCxcl10 (Mus musculus)9068941 RGDPMID:12097412 more ...
CXCL10DogCarrington Syndrome  ISOCXCL10 (Homo sapiens)9068941protein:increased expression:respiratory system fluid/secretionRGDPMID:15956791 and REF_RGD_ID:5135443
CXCL10Dogcholestasis  ISOCXCL10 (Homo sapiens)9068941associated with Chronic Hepatitis C and protein:increased expression:serum:RGDPMID:30507970 and REF_RGD_ID:27095896
CXCL10DogChronic Hepatitis B  ISOCXCL10 (Homo sapiens)9068941mRNA more ...RGDPMID:18234638 and REF_RGD_ID:27095951
CXCL10DogChronic Hepatitis B treatmentISOCXCL10 (Homo sapiens)9068941 RGDPMID:30660173 and REF_RGD_ID:27095888
CXCL10DogChronic Hepatitis C  ISOCXCL10 (Homo sapiens)9068941protein:increased expression:serumRGDPMID:31127759 and REF_RGD_ID:27095949
CXCL10Dogchronic obstructive pulmonary disease  ISOCXCL10 (Homo sapiens)9068941protein:increased expression:sputumRGDPMID:17925429 and REF_RGD_ID:5135436
CXCL10Dogcolon carcinoma treatmentISOCxcl10 (Mus musculus)9068941 RGDPMID:30381616 and REF_RGD_ID:27095891
CXCL10Dogcommon cold  ISOCXCL10 (Homo sapiens)9068941protein:increased expression:respiratory system fluid/secretionRGDPMID:15764644 and REF_RGD_ID:5135489
1 to 20 of 108 rows
Object Symbol
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Evidence
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Reference
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Source
Original Reference(s)
CXCL10Dogprogressive myoclonus epilepsy  ISOCXCL10 (Homo sapiens)8554872ClinVar Annotator: match by term: Progressive myoclonic epilepsyClinVarPMID:19847901 and PMID:28492532
1 to 17 of 17 rows
Object Symbol
Species
Term
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Evidence
With
Reference
Notes
Source
Original Reference(s)
CXCL10Dogalopecia areata  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:22358057
CXCL10Dogatopic dermatitis  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:18249437
CXCL10DogBrain Injuries  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:21549006
CXCL10Dogbrain ischemia  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:15829914
CXCL10Dogcardiovascular system disease  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:29114965
CXCL10Dogceliac disease  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:30097691
CXCL10Dogcerebrovascular disease  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:29114965
CXCL10DogChemical and Drug Induced Liver Injury  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:11739529
CXCL10DogColonic Neoplasms  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:15059925
CXCL10DogCOVID-19  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:31986264
CXCL10DogExperimental Liver Cirrhosis  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:25380136
CXCL10DogHuman Influenza  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:23326326
CXCL10Doginterstitial cystitis  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:18957084
CXCL10DogMyocardial Ischemia  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:16214533
CXCL10Dogprimary biliary cholangitis  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:18422935
CXCL10DogSpontaneous Abortions  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:18539642
CXCL10DogThyroid Neoplasms  ISOCXCL10 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:26037280
1 to 17 of 17 rows


Biological Process
1 to 20 of 48 rows

  
Object Symbol
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Term
Qualifier
Evidence
With
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Source
Original Reference(s)
CXCL10Dogadenylate cyclase-activating G protein-coupled receptor signaling pathway involved_inISSUniProtKB:P02778150520179 UniProtGO_REF:0000024
CXCL10Dogadenylate cyclase-activating G protein-coupled receptor signaling pathway involved_inIEAUniProtKB:P02778 and ensembl:ENSP00000305651150520179 EnsemblGO_REF:0000107
CXCL10Dogantimicrobial humoral immune response mediated by antimicrobial peptide involved_inISOCXCL10 (Homo sapiens)9068941 PMID:12949249UniProtPMID:12949249
CXCL10Dogantiviral innate immune response involved_inIEAUniProtKB:P02778 and ensembl:ENSP00000305651150520179 EnsemblGO_REF:0000107
CXCL10Dogcellular response to heat  ISOCxcl10 (Rattus norvegicus)9068941 RGDPMID:17457469 and REF_RGD_ID:2311382
CXCL10Dogcellular response to interleukin-17 involved_inIEAUniProtKB:P17515 and ensembl:ENSMUSP00000047646150520179 EnsemblGO_REF:0000107
CXCL10Dogcellular response to lipopolysaccharide acts_upstream_of_or_withinIEAUniProtKB:P02778 and ensembl:ENSP00000305651150520179 EnsemblGO_REF:0000107
CXCL10Dogcellular response to lipopolysaccharide involved_inIBAPANTHER:PTN008302571 and UniProtKB:P02778150520179 GO_CentralGO_REF:0000033
CXCL10Dogcellular response to virus involved_inIEAUniProtKB:P02778 and ensembl:ENSP00000305651150520179 EnsemblGO_REF:0000107
CXCL10Dogchemokine-mediated signaling pathway involved_inIEAUniProtKB:P02778 and ensembl:ENSP00000305651150520179 EnsemblGO_REF:0000107
CXCL10Dogchemokine-mediated signaling pathway involved_inIBAPANTHER:PTN008302571 and UniProtKB:P02778150520179 GO_CentralGO_REF:0000033
CXCL10Dogchemotaxis involved_inIEAUniProtKB-KW:KW-0145150520179 UniProtGO_REF:0000043
CXCL10Dogchemotaxis involved_inIEAUniProtKB:P02778 and ensembl:ENSP00000305651150520179 EnsemblGO_REF:0000107
CXCL10Dogchemotaxis involved_inIEAInterPro:IPR033899150520179 InterProGO_REF:0000002
CXCL10Dogchemotaxis involved_inISSUniProtKB:P02778150520179 UniProtGO_REF:0000024
CXCL10Dogdefense response involved_inIEAInterPro:IPR033899150520179 InterProGO_REF:0000002
CXCL10Dogdefense response to virus acts_upstream_of_or_withinIEAUniProtKB:P17515 and ensembl:ENSMUSP00000047646150520179 EnsemblGO_REF:0000107
CXCL10Dogendothelial cell activation involved_inIEAUniProtKB:P02778 and ensembl:ENSP00000305651150520179 EnsemblGO_REF:0000107
CXCL10DogG protein-coupled receptor signaling pathway involved_inISSUniProtKB:P02778150520179 UniProtGO_REF:0000024
CXCL10DogG protein-coupled receptor signaling pathway involved_inIEAUniProtKB:P02778 and ensembl:ENSP00000305651150520179 EnsemblGO_REF:0000107
1 to 20 of 48 rows

Cellular Component
1 to 9 of 9 rows

  
Object Symbol
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Notes
Source
Original Reference(s)
CXCL10Dogexternal side of plasma membrane located_inIEAUniProtKB:P17515 and ensembl:ENSMUSP00000047646150520179 EnsemblGO_REF:0000107
CXCL10Dogextracellular region located_inIEAUniProtKB-SubCell:SL-0243150520179 UniProtGO_REF:0000044
CXCL10Dogextracellular region located_inIEAUniProtKB:P02778 and ensembl:ENSP00000305651150520179 EnsemblGO_REF:0000107
CXCL10Dogextracellular region located_inIEAUniProtKB-KW:KW-0964150520179 UniProtGO_REF:0000043
CXCL10Dogextracellular region located_inIEAInterPro:IPR001089 more ...150520179 InterProGO_REF:0000002
CXCL10Dogextracellular space  ISOCxcl10 (Rattus norvegicus)9068941 RGDPMID:17457469 and REF_RGD_ID:2311382
CXCL10Dogextracellular space located_inIEAUniProtKB:P17515 and ensembl:ENSMUSP00000047646150520179 EnsemblGO_REF:0000107
CXCL10Dogextracellular space located_inIEAUniProtKB-KW:KW-0202150520179 UniProtGO_REF:0000043
CXCL10Dogextracellular space is_active_inIBAMGI:1352449 more ...150520179 GO_CentralGO_REF:0000033
1 to 9 of 9 rows

Molecular Function
1 to 13 of 13 rows

  
Object Symbol
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Original Reference(s)
CXCL10Dogchemoattractant activity enablesIEAUniProtKB:P02778 and ensembl:ENSP00000305651150520179 EnsemblGO_REF:0000107
CXCL10Dogchemokine activity  ISOCxcl10 (Rattus norvegicus)9068941 RGDPMID:9288136 and REF_RGD_ID:2311389
CXCL10Dogchemokine activity enablesIEAInterPro:IPR001089 more ...150520179 InterProGO_REF:0000002
CXCL10Dogchemokine activity enablesIEAUniProtKB:P02778 and ensembl:ENSP00000305651150520179 EnsemblGO_REF:0000107
CXCL10Dogchemokine activity enablesISSUniProtKB:P02778150520179 UniProtGO_REF:0000024
CXCL10Dogchemokine activity enablesIBAPANTHER:PTN008302571 more ...150520179 GO_CentralGO_REF:0000033
CXCL10DogCXCR chemokine receptor binding enablesIBAPANTHER:PTN008302571 more ...150520179 GO_CentralGO_REF:0000033
CXCL10DogCXCR3 chemokine receptor binding enablesISSUniProtKB:P02778150520179 UniProtGO_REF:0000024
CXCL10DogCXCR3 chemokine receptor binding enablesIEAUniProtKB:P02778 and ensembl:ENSP00000305651150520179 EnsemblGO_REF:0000107
CXCL10Dogcytokine activity enablesIEAUniProtKB-KW:KW-0202150520179 UniProtGO_REF:0000043
CXCL10Dogheparin binding enablesIEAUniProtKB:P02778 and ensembl:ENSP00000305651150520179 EnsemblGO_REF:0000107
CXCL10Dogprotein binding enablesISOUniProtKB:P274879068941 PMID:18275857 and PMID:21314817IntActPMID:18275857 and PMID:21314817
CXCL10Dogprotein binding enablesISOUniProtKB:O00585 more ...9068941 PMID:28381538IntActPMID:28381538
1 to 13 of 13 rows

PMID:22301074   PMID:30032202  



CXCL10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.132598,406 - 599,925 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl32597,987 - 599,979 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3241,282,571 - 41,284,090 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.032623,230 - 624,745 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl32622,462 - 624,803 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.132622,982 - 624,501 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.032577,290 - 578,808 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03239,590,894 - 39,592,413 (+)NCBIUU_Cfam_GSD_1.0
CXCL10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38476,021,118 - 76,023,497 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl476,021,118 - 76,023,497 (-)EnsemblGRCh38hg38GRCh38
GRCh37476,942,271 - 76,944,650 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36477,161,295 - 77,163,674 (-)NCBINCBI36Build 36hg18NCBI36
Build 34477,299,451 - 77,301,829NCBI
Celera474,243,028 - 74,245,407 (-)NCBICelera
Cytogenetic Map4q21.1NCBI
HuRef472,694,720 - 72,697,139 (-)NCBIHuRef
CHM1_1476,918,847 - 76,921,265 (-)NCBICHM1_1
T2T-CHM13v2.0479,361,779 - 79,364,158 (-)NCBIT2T-CHM13v2.0
Cxcl10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39592,494,497 - 92,496,748 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl592,494,497 - 92,496,748 (-)EnsemblGRCm39 Ensembl
GRCm38592,346,638 - 92,348,889 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl592,346,638 - 92,348,889 (-)EnsemblGRCm38mm10GRCm38
MGSCv37592,775,667 - 92,777,880 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36593,421,841 - 93,424,054 (-)NCBIMGSCv36mm8
Celera590,490,436 - 90,492,644 (-)NCBICelera
Cytogenetic Map5E2NCBI
cM Map546.57NCBI
Cxcl10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81415,989,066 - 15,991,263 (+)NCBIGRCr8
mRatBN7.21415,704,772 - 15,706,969 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1415,704,758 - 15,706,975 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1415,712,934 - 15,715,131 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01417,031,780 - 17,033,977 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01415,727,209 - 15,729,406 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01417,210,733 - 17,212,930 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1417,210,733 - 17,212,930 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01417,126,865 - 17,129,062 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41417,265,986 - 17,268,183 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11417,265,985 - 17,268,183 (+)NCBI
Celera1415,099,217 - 15,101,414 (+)NCBICelera
RH 3.4 Map14182.09RGD
Cytogenetic Map14p22NCBI
Cxcl10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955433748,284 - 750,927 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955433748,392 - 750,890 (-)NCBIChiLan1.0ChiLan1.0
CXCL10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2354,049,643 - 54,052,033 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1454,239,397 - 54,241,786 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0448,182,355 - 48,184,733 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1454,020,204 - 54,022,606 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl454,020,204 - 54,022,606 (+)Ensemblpanpan1.1panPan2
Cxcl10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528511,442,665 - 11,446,615 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493667660,621 - 63,106 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493667660,869 - 63,028 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CXCL10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl871,693,339 - 71,695,948 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1871,693,641 - 71,695,948 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2875,829,909 - 75,831,236 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Sscrofa10.2875,881,457 - 75,882,217 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CXCL10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1724,526,657 - 24,529,193 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl724,526,680 - 24,529,130 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660372,868,983 - 2,871,422 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cxcl10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475714,989,084 - 14,991,910 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475714,989,241 - 14,991,650 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in CXCL10
25 total Variants



adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10



Ensembl Acc Id: ENSCAFT00000036612   ⟹   ENSCAFP00000032015
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl32597,987 - 599,979 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845052887   ⟹   ENSCAFP00845041528
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl32622,462 - 624,803 (-)Ensembl
RefSeq Acc Id: NM_001010949   ⟹   NP_001010949
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.132598,406 - 599,925 (-)NCBI
Dog10K_Boxer_Tasha3241,282,571 - 41,284,090 (+)NCBI
ROS_Cfam_1.032623,230 - 624,745 (-)NCBI
UMICH_Zoey_3.132622,982 - 624,501 (-)NCBI
UNSW_CanFamBas_1.032577,290 - 578,808 (-)NCBI
UU_Cfam_GSD_1.03239,590,894 - 39,592,413 (+)NCBI
Sequence:
Protein RefSeqs NP_001010949 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein BAD83839 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000032015.2
  ENSCAFP00030022791.1
  ENSCAFP00040038650.1
  ENSCAFP00845041528
  ENSCAFP00845041528.1
GenBank Protein Q5KSV9 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001010949   ⟸   NM_001010949
- Peptide Label: precursor
- UniProtKB: Q5KSV9 (UniProtKB/Swiss-Prot),   A0A8C0KEM9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000032015   ⟸   ENSCAFT00000036612
Ensembl Acc Id: ENSCAFP00845041528   ⟸   ENSCAFT00845052887

RGD ID:13688678
Promoter ID:EPDNEW_C6746
Type:single initiation site
Name:CXCL10_1
Description:C-X-C motif chemokine ligand 10
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.132599,986 - 600,046EPDNEW


1 to 28 of 28 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCAFG00000008584 Ensembl, UniProtKB/Swiss-Prot
  ENSCAFG00030014095 UniProtKB/Swiss-Prot
  ENSCAFG00040023780 UniProtKB/Swiss-Prot
  ENSCAFG00845029862 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSCAFT00000036612.4 UniProtKB/Swiss-Prot
  ENSCAFT00030026099.1 UniProtKB/Swiss-Prot
  ENSCAFT00040044270.1 UniProtKB/Swiss-Prot
  ENSCAFT00845052887 ENTREZGENE
  ENSCAFT00845052887.1 UniProtKB/Swiss-Prot
Gene3D-CATH 2.40.50.40 UniProtKB/Swiss-Prot
InterPro Chemokine_b/g/d UniProtKB/Swiss-Prot
  Chemokine_CXC UniProtKB/Swiss-Prot
  Chemokine_CXC_CS UniProtKB/Swiss-Prot
  Chemokine_IL8-like_dom UniProtKB/Swiss-Prot
  CXC_Chemokine_domain UniProtKB/Swiss-Prot
  Interleukin_8-like_sf UniProtKB/Swiss-Prot
KEGG Report cfa:478432 UniProtKB/Swiss-Prot
NCBI Gene CXCL10 ENTREZGENE
PANTHER C-X-C MOTIF CHEMOKINE 10 UniProtKB/Swiss-Prot
  SMALL INDUCIBLE CYTOKINE A UniProtKB/Swiss-Prot
Pfam IL8 UniProtKB/Swiss-Prot
PRINTS SMALLCYTKCXC UniProtKB/Swiss-Prot
PROSITE SMALL_CYTOKINES_CXC UniProtKB/Swiss-Prot
SMART SCY UniProtKB/Swiss-Prot
Superfamily-SCOP SSF54117 UniProtKB/Swiss-Prot
UniProt A0A8C0KEM9 ENTREZGENE
  CXL10_CANLF UniProtKB/Swiss-Prot, ENTREZGENE
VGNC ID VGNC:49645 ENTREZGENE
1 to 28 of 28 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-09-12 CXCL10  C-X-C motif chemokine ligand 10    chemokine (C-X-C motif) ligand 10  Symbol and/or name change 5135510 APPROVED