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ONTOLOGY REPORT - ANNOTATIONS

Term:positive regulation of transcription elongation by RNA polymerase II
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Accession:GO:0032968 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.
Synonyms:exact_synonym: positive regulation of RNA elongation from RNA polymerase II promoter;   positive regulation of transcription elongation from RNA polymerase II promoter
 related_synonym: positive regulation of gene-specific transcription elongation from RNA polymerase II promoter
 alt_id: GO:0090040


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positive regulation of transcription elongation by RNA polymerase II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRD4 bromodomain containing 4 acts_upstream_of_or_within
involved_in		 IMP
IDA		 (PMID:18039861)
(PMID:19103749)		 MGI
UniProt		 PMID:18039861 PMID:19103749 NCBI chr19:15,235,519...15,332,539
Ensembl chr19:15,235,519...15,332,545 		JBrowse link
G BTBD18 BTB domain containing 18 involved_in IEA InterPro GO_REF:0000002 NCBI chr11:57,743,514...57,753,166
Ensembl chr11:57,743,514...57,752,675 		JBrowse link
G CBX7 chromobox 7 ISO RGD PMID:19706751 RGD:9586729 NCBI chr22:39,130,772...39,152,680
Ensembl chr22:39,120,167...39,152,680 		JBrowse link
G CCNK cyclin K involved_in IDA (PMID:22988298), (PMID:26748711) ComplexPortal PMID:22988298 PMID:26748711 NCBI chr14:99,481,409...99,512,440
Ensembl chr14:99,481,169...99,535,044 		JBrowse link
G CCNT1 cyclin T1 involved_in IDA (PMID:30134174), (PMID:35393539), (PMID:9499409) UniProt PMID:9499409 PMID:30134174 PMID:35393539 NCBI chr12:48,688,458...48,716,707
Ensembl chr12:48,688,458...48,716,998 		JBrowse link
G CCNT2 cyclin T2 involved_in IDA (PMID:9499409) ComplexPortal PMID:9499409 NCBI chr 2:134,918,822...134,959,342
Ensembl chr 2:134,918,235...134,959,342 		JBrowse link
G CDC73 cell division cycle 73 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:193,122,031...193,254,815
Ensembl chr 1:193,121,983...193,254,815 		JBrowse link
G CDK12 cyclin dependent kinase 12 involved_in IDA
IBA		 (PMID:22988298) ComplexPortal
GO_Central		 PMID:22988298 GO_REF:0000033 NCBI chr17:39,461,486...39,567,559
Ensembl chr17:39,461,486...39,567,559 		JBrowse link
G CDK13 cyclin dependent kinase 13 involved_in IDA
IEA
IBA		 (PMID:26748711) ComplexPortal
TreeGrafter
GO_Central		 PMID:26748711 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:39,950,256...40,099,580
Ensembl chr 7:39,950,121...40,099,580 		JBrowse link
G CDK9 cyclin dependent kinase 9 involved_in IDA
IEA		 (PMID:14701750), (PMID:30134174), (PMID:9499409) UniProt
TreeGrafter		 PMID:9499409 PMID:14701750 PMID:30134174 GO_REF:0000118 NCBI chr 9:127,786,034...127,790,792
Ensembl chr 9:127,785,679...127,790,792 		JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096 		JBrowse link
G DAB2 DAB adaptor protein 2 involved_in ISO (MGI:5442512|PMID:15894542) UniProt PMID:15894542 MGI:5442512 NCBI chr 5:39,371,677...39,424,980
Ensembl chr 5:39,371,675...39,462,300 		JBrowse link
G EAPP E2F associated phosphoprotein acts_upstream_of_or_within IDA (PMID:15716352) MGI PMID:15716352 NCBI chr14:34,515,938...34,539,701
Ensembl chr14:34,515,938...34,539,704 		JBrowse link
G ELL elongation factor for RNA polymerase II involved_in IMP
IEA
IBA		 (PMID:23932780) UniProt
TreeGrafter
GO_Central		 PMID:23932780 GO_REF:0000033 GO_REF:0000118 NCBI chr19:18,442,663...18,522,070
Ensembl chr19:18,442,663...18,522,116 		JBrowse link
G ELL2 elongation factor for RNA polymerase II 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:95,885,098...95,961,851
Ensembl chr 5:95,885,098...95,961,851 		JBrowse link
G ELL3 elongation factor for RNA polymerase II 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:43,772,620...43,776,966
Ensembl chr15:43,772,605...43,777,315 		JBrowse link
G ELOC elongin C ISO RGD PMID:8202474 RGD:730008 NCBI chr 8:73,945,119...73,972,287
Ensembl chr 8:73,939,169...73,972,307 		JBrowse link
G GTF2F1 general transcription factor IIF subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr19:6,379,572...6,393,164
Ensembl chr19:6,379,572...6,393,981 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:21245044) MGI PMID:21245044 NCBI chr 7:50,303,455...50,405,101
Ensembl chr 7:50,304,068...50,405,101 		JBrowse link
G LDB1 LIM domain binding 1 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:102,102,088...102,121,442
Ensembl chr10:102,106,489...102,120,368 		JBrowse link
G LEO1 LEO1 homolog, Paf1/RNA polymerase II complex component involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr15:51,938,025...51,971,778
Ensembl chr15:51,938,025...51,971,778 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO RGD PMID:18086894 RGD:2292639 NCBI chr15:66,386,912...66,491,544
Ensembl chr15:66,386,837...66,491,656 		JBrowse link
G MED1 mediator complex subunit 1 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr17:39,404,285...39,451,263
Ensembl chr17:39,404,285...39,451,272 		JBrowse link
G MED10 mediator complex subunit 10 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr 5:6,371,874...6,378,547
Ensembl chr 5:6,371,874...6,378,571 		JBrowse link
G MED11 mediator complex subunit 11 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr17:4,731,428...4,733,607
Ensembl chr17:4,731,428...4,733,608 		JBrowse link
G MED14 mediator complex subunit 14 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr  X:40,648,305...40,736,159
Ensembl chr  X:40,648,305...40,735,858 		JBrowse link
G MED15 mediator complex subunit 15 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr22:20,507,610...20,587,619
Ensembl chr22:20,495,913...20,587,632 		JBrowse link
G MED16 mediator complex subunit 16 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr19:867,963...893,187
Ensembl chr19:867,630...893,218 		JBrowse link
G MED17 mediator complex subunit 17 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr11:93,784,282...93,814,963
Ensembl chr11:93,784,227...93,814,963 		JBrowse link
G MED18 mediator complex subunit 18 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr 1:28,329,040...28,335,965
Ensembl chr 1:28,329,002...28,335,965 		JBrowse link
G MED19 mediator complex subunit 19 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr11:57,703,709...57,712,215
Ensembl chr11:57,703,710...57,712,221 		JBrowse link
G MED20 mediator complex subunit 20 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr 6:41,905,354...41,921,139
Ensembl chr 6:41,905,354...41,921,139 		JBrowse link
G MED21 mediator complex subunit 21 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr12:27,022,558...27,038,951
Ensembl chr12:27,022,546...27,066,343 		JBrowse link
G MED22 mediator complex subunit 22 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr 9:133,338,312...133,348,131
Ensembl chr 9:133,338,312...133,348,131 		JBrowse link
G MED23 mediator complex subunit 23 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr 6:131,573,966...131,628,313
Ensembl chr 6:131,573,966...131,628,242 		JBrowse link
G MED24 mediator complex subunit 24 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr17:40,019,104...40,054,408
Ensembl chr17:40,019,097...40,061,215 		JBrowse link
G MED25 mediator complex subunit 25 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr19:49,818,289...49,840,384
Ensembl chr19:49,818,282...49,840,383 		JBrowse link
G MED26 mediator complex subunit 26 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr19:16,574,919...16,628,204
Ensembl chr19:16,574,907...16,629,062 		JBrowse link
G MED27 mediator complex subunit 27 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr 9:131,860,112...132,079,867
Ensembl chr 9:131,852,928...132,079,867 		JBrowse link
G MED28 mediator complex subunit 28 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr 4:17,614,641...17,634,105
Ensembl chr 4:17,614,641...17,634,105 		JBrowse link
G MED29 mediator complex subunit 29 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr19:39,391,378...39,400,641
Ensembl chr19:39,391,303...39,400,641 		JBrowse link
G MED30 mediator complex subunit 30 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr 8:117,520,713...117,540,262
Ensembl chr 8:117,520,713...117,540,262 		JBrowse link
G MED31 mediator complex subunit 31 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr17:6,643,311...6,651,605
Ensembl chr17:6,643,311...6,651,634 		JBrowse link
G MED4 mediator complex subunit 4 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr13:48,075,724...48,095,104
Ensembl chr13:48,053,323...48,095,131 		JBrowse link
G MED6 mediator complex subunit 6 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr14:70,583,221...70,600,655
Ensembl chr14:70,581,257...70,600,690 		JBrowse link
G MED7 mediator complex subunit 7 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr 5:157,137,424...157,142,865
Ensembl chr 5:157,137,424...157,159,019 		JBrowse link
G MED8 mediator complex subunit 8 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr 1:43,383,917...43,389,800
Ensembl chr 1:43,383,917...43,389,808 		JBrowse link
G MED9 mediator complex subunit 9 involved_in NAS (PMID:11559591) ComplexPortal PMID:11559591 NCBI chr17:17,477,000...17,493,221
Ensembl chr17:17,476,994...17,493,221 		JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in NAS (PMID:21536667) ComplexPortal PMID:21536667 NCBI chr 9:97,633,821...97,673,748
Ensembl chr 9:97,633,668...97,673,748 		JBrowse link
G NCBP2 nuclear cap binding protein subunit 2 involved_in NAS (PMID:21536667) ComplexPortal PMID:21536667 NCBI chr 3:196,935,406...196,942,528
Ensembl chr 3:196,935,402...196,942,594 		JBrowse link
G PWWP2A PWWP domain containing 2A involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:160,044,316...160,119,450
Ensembl chr 5:160,061,801...160,119,450 		JBrowse link
G PWWP2B PWWP domain containing 2B involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:132,397,200...132,417,859
Ensembl chr10:132,397,168...132,417,859 		JBrowse link
G SUPT6H SPT6 homolog, histone chaperone and transcription elongation factor involved_in IMP
IEA		 (PMID:17234882) UniProt
Ensembl		 PMID:17234882 GO_REF:0000107 NCBI chr17:28,662,205...28,702,679
Ensembl chr17:28,662,198...28,702,679 		JBrowse link
G TCERG1 transcription elongation regulator 1 involved_in TAS (PMID:20215116) ARUK-UCL PMID:20215116 NCBI chr 5:146,447,330...146,511,961
Ensembl chr 5:146,447,311...146,511,961 		JBrowse link
G ZMYND8 zinc finger MYND-type containing 8 involved_in IPI
IMP		 (PMID:30134174)
(PMID:26655721)		 UniProt PMID:26655721 PMID:30134174 NCBI chr20:47,209,214...47,356,699
Ensembl chr20:47,209,214...47,356,889 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19670
    metabolic process 12471
      organic substance metabolic process 11974
        macromolecule metabolic process 10252
          macromolecule biosynthetic process 8230
            RNA biosynthetic process 3702
              DNA-templated transcription elongation 146
                transcription elongation by RNA polymerase II 129
                  positive regulation of transcription elongation by RNA polymerase II 55
Path 2
Term Annotations click to browse term
  biological_process 19670
    metabolic process 12471
      organic substance metabolic process 11974
        organic cyclic compound metabolic process 7070
          nucleobase-containing compound metabolic process 6539
            nucleic acid metabolic process 5935
              RNA metabolic process 5334
                RNA biosynthetic process 3702
                  DNA-templated transcription 3675
                    DNA-templated transcription elongation 146
                      regulation of DNA-templated transcription elongation 106
                        positive regulation of DNA-templated transcription, elongation 63
                          positive regulation of transcription elongation by RNA polymerase II 55
paths to the root