ONTOLOGY REPORT - ANNOTATIONS |
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Term: | RNA metabolic process |
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Accession: | GO:0016070
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browse the term
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Definition: | The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. |
Synonyms: | exact_synonym: | RNA metabolism |
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Ddx54 |
DEAD-box helicase 54 |
involved_in |
ISO |
(PMID:12466272) |
RGD |
PMID:12466272 |
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NCBI chr12:35,934,713...35,949,956
Ensembl chr12:35,934,716...35,972,523
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Dxo |
decapping exoribonuclease |
involved_in |
IEA |
GO_REF:0000117 |
UniProt |
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GO_REF:0000117 |
NCBI chr20:3,993,322...3,995,484
Ensembl chr20:3,993,327...3,995,494
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Hnrnpa1 |
heterogeneous nuclear ribonucleoprotein A1 |
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TAS |
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RGD |
PMID:3005291 |
RGD:68800 |
NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
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Ncbp1 |
nuclear cap binding protein subunit 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089
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Wdr74 |
WD repeat domain 74 |
acts_upstream_of_or_within |
ISO |
(MGI:5287298|PMID:21799883) |
RGD |
PMID:21799883 |
MGI:5287298 |
NCBI chr 1:205,631,769...205,636,563
Ensembl chr 1:205,631,824...205,636,563
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Xrn2 |
5'-3' exoribonuclease 2 |
involved_in |
ISO |
UniProtKB:P40848 (MGI:71199|PMID:7885830) |
RGD |
PMID:7885830 |
MGI:71199 |
NCBI chr 3:134,436,916...134,509,308
Ensembl chr 3:134,437,109...134,509,306
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Zc3h6 |
zinc finger CCCH type containing 6 |
involved_in |
IEA |
GO_REF:0000117 |
UniProt |
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GO_REF:0000117 |
NCBI chr 3:116,203,466...116,254,186
Ensembl chr 3:116,204,197...116,253,282
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Cpeb3 |
cytoplasmic polyadenylation element binding protein 3 |
involved_in |
ISO |
(PMID:21336257) |
RGD |
PMID:21336257 |
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NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
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Dhx36 |
DEAH-box helicase 36 |
involved_in |
ISO ISS |
(PMID:26489465) GO_REF:0000024 |
RGD UniProt |
PMID:26489465 |
GO_REF:0000024 |
NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
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Dnd1 |
DND microRNA-mediated repression inhibitor 1 |
involved_in |
ISO |
(PMID:28297718) |
RGD |
PMID:28297718 |
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NCBI chr18:28,378,692...28,381,316
Ensembl chr18:28,378,692...28,381,316
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Hnrnpd |
heterogeneous nuclear ribonucleoprotein D |
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IMP |
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RGD |
PMID:20805360 |
RGD:10042974 |
NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
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Khsrp |
KH-type splicing regulatory protein |
involved_in |
ISO ISS |
(PMID:16126846), (PMID:28275056) GO_REF:0000024 |
RGD UniProt |
PMID:16126846 PMID:28275056 |
GO_REF:0000024 |
NCBI chr 9:1,862,555...1,872,301
Ensembl chr 9:1,862,899...1,872,451
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Mov10 |
Mov10 RISC complex RNA helicase |
involved_in |
ISO |
(PMID:24726324) |
RGD |
PMID:24726324 |
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NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083
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Plekhn1 |
pleckstrin homology domain containing N1 |
involved_in |
IBA ISO |
PMID:21873635 (MGI:6105829|PMID:27616329) (PMID:29180010) |
RGD |
PMID:27616329 PMID:29180010 PMID:21873635 |
MGI:6105829, RGD:13792537 |
NCBI chr 5:166,805,309...166,813,339
Ensembl chr 5:166,804,837...166,813,155
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Qki |
QKI, KH domain containing RNA binding |
acts_upstream_of_or_within |
ISO |
(MGI:5316962|PMID:20631256) |
RGD |
PMID:20631256 |
MGI:5316962 |
NCBI chr 1:50,387,698...50,501,568
Ensembl chr 1:50,387,698...50,498,831
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Rbm24 |
RNA binding motif protein 24 |
involved_in |
ISO |
(PMID:24375645) |
RGD |
PMID:24375645 |
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NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
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Rc3h1 |
ring finger and CCCH-type domains 1 |
involved_in |
ISO |
(MGI:5706859|PMID:26000482) |
RGD |
PMID:26000482 |
MGI:5706859 |
NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
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Tardbp |
TAR DNA binding protein |
involved_in |
ISO |
(PMID:28335005) |
RGD |
PMID:28335005 |
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NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
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Trim71 |
tripartite motif containing 71 |
involved_in |
ISO |
(PMID:23125361) |
RGD |
PMID:23125361 |
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NCBI chr 8:114,193,439...114,250,807
Ensembl chr 8:114,199,187...114,250,807
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Upf1 |
UPF1, RNA helicase and ATPase |
involved_in |
ISO |
(PMID:24726324) |
RGD |
PMID:24726324 |
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NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
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Zc3h12a |
zinc finger CCCH type containing 12A |
involved_in |
ISS ISO IBA |
GO_REF:0000024 (MGI:3842851|PMID:19322177), (MGI:5706859|PMID:26000482), (MGI:5706909|PMID:23185455), (MGI:5707103|PMID:26134560) PMID:21873635 (PMID:19909337) |
UniProt RGD |
PMID:19322177 PMID:19909337 PMID:23185455 PMID:26000482 PMID:26134560 PMID:21873635 More...
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GO_REF:0000024 MGI:3842851 MGI:5706859 MGI:5706909 MGI:5707103, RGD:13792537 |
NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
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Zc3h12d |
zinc finger CCCH type containing 12D |
involved_in |
ISO IBA |
(MGI:5707103|PMID:26134560) PMID:21873635 |
RGD |
PMID:26134560 PMID:21873635 |
MGI:5707103, RGD:13792537 |
NCBI chr 1:2,313,110...2,348,820
Ensembl chr 1:2,314,324...2,348,819
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Zfp36 |
zinc finger protein 36 |
involved_in |
ISO IEA ISS |
(PMID:11719186), (PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15687258), (PMID:15766526), (PMID:20221403), (PMID:27193233), (PMID:9703499) GO_REF:0000104 GO_REF:0000024 (MGI:5784976|PMID:22701344), (MGI:5788345|PMID:27193233), (MGI:5795824|PMID:17288565) |
RGD UniProt |
PMID:9703499 PMID:11719186 PMID:14679154 PMID:15187101 PMID:15634918 PMID:15687258 PMID:15766526 PMID:17288565 PMID:20221403 PMID:22701344 PMID:27193233 More...
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GO_REF:0000024 GO_REF:0000104 MGI:5784976 MGI:5788345 MGI:5795824 |
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
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Zfp36l1 |
zinc finger protein 36, C3H type-like 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4818820|PMID:20622884), (MGI:5779430|PMID:27102483), (MGI:5784967|PMID:24733888), (MGI:5784968|PMID:24700863), (MGI:5784976|PMID:22701344) (PMID:12198173), (PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:25014217), (PMID:25106868), (PMID:26542173) |
UniProt RGD |
PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 PMID:19179481 PMID:20622884 PMID:22701344 PMID:24700863 PMID:24733888 PMID:25014217 PMID:25106868 PMID:26542173 PMID:27102483 More...
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GO_REF:0000024 MGI:4818820 MGI:5779430 MGI:5784967 MGI:5784968 MGI:5784976 |
NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
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Zfp36l2 |
zinc finger protein 36, C3H type-like 2 |
involved_in |
ISO |
(PMID:25106868) (MGI:4818820|PMID:20622884), (MGI:5784976|PMID:22701344) |
RGD |
PMID:20622884 PMID:22701344 PMID:25106868 |
MGI:4818820 MGI:5784976 |
NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064
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Angel2 |
angel homolog 2 |
involved_in |
ISO IBA |
(PMID:22547059) PMID:21873635 |
RGD |
PMID:22547059 PMID:21873635 |
RGD:13792537 |
NCBI chr13:102,509,111...102,529,501
Ensembl chr13:102,510,589...102,529,493
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Boll |
boule homolog, RNA binding protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 9:56,734,890...56,859,917
Ensembl chr 9:56,733,584...56,859,916
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Dazl |
deleted in azoospermia-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 9:10,695,572...10,712,443
Ensembl chr 9:10,695,592...10,712,323
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Elavl1 |
ELAV like RNA binding protein 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6105829|PMID:27616329) (PMID:14517288), (PMID:19029303), (PMID:26489465), (PMID:29180010) |
UniProt RGD |
PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 |
GO_REF:0000024 MGI:6105829 |
NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784
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Elavl4 |
ELAV like RNA binding protein 4 |
involved_in |
ISO ISS |
(PMID:12034726) GO_REF:0000024 |
RGD UniProt |
PMID:12034726 |
GO_REF:0000024 |
NCBI chr 5:125,056,848...125,200,543
Ensembl chr 5:125,056,848...125,200,446
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Hnrnpa0 |
heterogeneous nuclear ribonucleoprotein A0 |
involved_in |
ISO IBA |
(MGI:5306322|PMID:12456657) PMID:21873635 |
RGD |
PMID:12456657 PMID:21873635 |
MGI:5306322, RGD:13792537 |
NCBI chr17:6,507,413...6,509,373
Ensembl chr17:6,507,275...6,509,375
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Hnrnpc |
heterogeneous nuclear ribonucleoprotein C |
involved_in |
ISO |
(PMID:16010978) |
RGD |
PMID:16010978 |
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NCBI chr15:24,779,593...24,809,213
Ensembl chr15:24,779,450...24,809,183
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Mapkapk2 |
MAPK activated protein kinase 2 |
involved_in |
ISO |
(PMID:14517288), (PMID:15014438), (PMID:20932473) |
RGD |
PMID:14517288 PMID:15014438 PMID:20932473 |
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NCBI chr13:42,513,762...42,560,061
Ensembl chr13:42,513,762...42,560,457
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Myd88 |
MYD88, innate immune signal transduction adaptor |
involved_in |
ISO |
(PMID:15294994) |
RGD |
PMID:15294994 |
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NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
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Ptbp1 |
polypyrimidine tract binding protein 1 |
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IDA |
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RGD |
PMID:11696543 |
RGD:10045987 |
NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
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Rbm10 |
RNA binding motif protein 10 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:4367529|PMID:19508861) GO_REF:0000107 |
RGD Ensembl |
PMID:19508861 |
GO_REF:0000107 MGI:4367529 |
NCBI chr X:1,540,399...1,572,571
Ensembl chr X:1,540,398...1,572,575
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Rbm38 |
RNA binding motif protein 38 |
involved_in |
ISO |
(PMID:17050675) |
RGD |
PMID:17050675 |
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NCBI chr 3:161,801,550...161,814,381
Ensembl chr 3:161,801,577...161,814,381
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Rbm47 |
RNA binding motif protein 47 |
involved_in |
ISO |
(PMID:34160127) (MGI:6859910|PMID:29844590) |
RGD |
PMID:29844590 PMID:34160127 |
MGI:6859910 |
NCBI chr14:42,053,290...42,191,572
Ensembl chr14:42,154,142...42,189,431
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Tardbp |
TAR DNA binding protein |
involved_in |
ISO |
(PMID:17481916) |
RGD |
PMID:17481916 |
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NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
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Tirap |
TIR domain containing adaptor protein |
involved_in |
ISO |
(PMID:15294994) |
RGD |
PMID:15294994 |
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NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432
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Zfp36 |
zinc finger protein 36 |
involved_in |
ISO ISS |
(PMID:15014438) GO_REF:0000024 |
RGD UniProt |
PMID:15014438 |
GO_REF:0000024 |
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
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Tgs1 |
trimethylguanosine synthase 1 |
involved_in |
ISO IBA |
(PMID:16687569) PMID:21873635 |
RGD |
PMID:16687569 PMID:21873635 |
RGD:13792537 |
NCBI chr 5:16,524,864...16,558,399
Ensembl chr 5:16,524,874...16,558,399
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Cmtr1 |
cap methyltransferase 1 |
involved_in |
ISS IBA ISO IEA |
GO_REF:0000024 PMID:21873635 (PMID:20713356), (PMID:21310715) GO_REF:0000104 |
UniProt RGD |
PMID:20713356 PMID:21310715 PMID:21873635 |
GO_REF:0000024 GO_REF:0000104, RGD:13792537 |
NCBI chr20:7,722,729...7,782,579
Ensembl chr20:7,709,713...7,766,302
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Cmtr2 |
cap methyltransferase 2 |
involved_in |
ISO IBA |
(PMID:21310715) PMID:21873635 |
RGD |
PMID:21310715 PMID:21873635 |
RGD:13792537 |
NCBI chr19:38,190,718...38,197,549
Ensembl chr19:38,190,642...38,197,804
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Ncbp1 |
nuclear cap binding protein subunit 1 |
involved_in |
ISO IEA ISS |
(PMID:12434151) GO_REF:0000043 GO_REF:0000024 |
RGD UniProt |
PMID:12434151 |
GO_REF:0000024 GO_REF:0000043 |
NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089
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Ramac |
RNA guanine-7 methyltransferase activating subunit |
involved_in |
ISO |
(PMID:22099306) |
RGD |
PMID:22099306 |
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NCBI chr 1:135,708,529...135,714,417
Ensembl chr 1:135,708,535...135,722,151
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Rngtt |
RNA guanylyltransferase and 5'-phosphatase |
involved_in |
ISO IBA |
(PMID:9473487) PMID:21873635 |
RGD |
PMID:9473487 PMID:21873635 |
RGD:13792537 |
NCBI chr 5:47,706,929...47,913,297
Ensembl chr 5:47,706,799...47,913,295
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Rnmt |
RNA (guanine-7-) methyltransferase |
involved_in |
IBA IEA ISO ISS |
PMID:21873635 GO_REF:0000107 GO_REF:0000043 (PMID:27422871), (PMID:9790902) GO_REF:0000024 |
Ensembl UniProt RGD |
PMID:9790902 PMID:27422871 PMID:21873635 |
GO_REF:0000024 GO_REF:0000043 GO_REF:0000107, RGD:13792537 |
NCBI chr18:61,886,230...61,909,775
Ensembl chr18:61,886,292...61,909,775
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Tgs1 |
trimethylguanosine synthase 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 5:16,524,864...16,558,399
Ensembl chr 5:16,524,874...16,558,399
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Adad1 |
adenosine deaminase domain containing 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:119,948,809...120,005,920
Ensembl chr 2:119,948,926...120,005,913
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Adad2 |
adenosine deaminase domain containing 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr19:47,665,288...47,669,433
Ensembl chr19:47,665,309...47,669,436
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Adar |
adenosine deaminase, RNA-specific |
involved_in acts_upstream_of_or_within |
IBA IEA ISO ISS |
PMID:21873635 GO_REF:0000107 MGI:3029789 (MGI:3027456|PMID:14615479) (MGI:5447614|PMID:17369310) GO_REF:0000024 (PMID:15858013), (PMID:16475990), (PMID:19651874), (PMID:21289159) |
Ensembl RGD UniProt |
PMID:14615479 PMID:15858013 PMID:16475990 PMID:17369310 PMID:19651874 PMID:21289159 PMID:21873635 More...
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GO_REF:0000024 GO_REF:0000107 MGI:3027456 MGI:5447614, RGD:13792537 |
NCBI chr 2:175,138,391...175,178,280
Ensembl chr 2:175,138,403...175,178,282
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Adarb1 |
adenosine deaminase, RNA-specific, B1 |
involved_in acts_upstream_of_or_within |
IDA IEA ISO ISS IBA |
GO_REF:0000107 (MGI:5447614|PMID:17369310) MGI:4840554 (MGI:4831065|PMID:20826656) (PMID:18178553), (PMID:21289159), (PMID:32220291) GO_REF:0000024 PMID:21873635 |
Ensembl RGD UniProt |
PMID:17369310 PMID:18178553 PMID:20826656 PMID:21289159 PMID:32220291 PMID:8559253 PMID:21873635 More...
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GO_REF:0000024 GO_REF:0000107 MGI:4831065 MGI:5447614, RGD:631737, RGD:13792537 |
NCBI chr20:11,222,569...11,350,854
Ensembl chr20:11,222,583...11,350,852
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Adarb2 |
adenosine deaminase, RNA-specific, B2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr17:61,750,437...62,300,984
Ensembl chr17:61,756,067...62,300,831
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Mettl3 |
methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit |
involved_in |
ISO |
(MGI:5621227|PMID:25569111) |
RGD |
PMID:25569111 |
MGI:5621227 |
NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041
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AABR07001435.1 |
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involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
Ensembl chr 1:43,640,876...43,641,875
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AABR07056845.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 7:37,066,520...37,067,514
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Cdk13 |
cyclin-dependent kinase 13 |
involved_in |
ISO |
(MGI:3699439|PMID:17261272) |
RGD |
PMID:17261272 |
MGI:3699439 |
NCBI chr17:47,251,145...47,344,675
Ensembl chr17:47,251,163...47,341,721
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Celf4 |
CUGBP, Elav-like family member 4 |
acts_upstream_of_or_within |
ISO |
(PMID:19720736) |
RGD |
PMID:19720736 |
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NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
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Ddx17 |
DEAD-box helicase 17 |
involved_in |
ISO IBA |
(PMID:24275493), (PMID:24910439) PMID:21873635 (MGI:5883203|PMID:24910439) |
RGD |
PMID:24275493 PMID:24910439 PMID:21873635 |
MGI:5883203, RGD:13792537 |
NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193
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G |
Ddx5 |
DEAD-box helicase 5 |
involved_in |
ISO IBA |
(PMID:24275493), (PMID:24910439) PMID:21873635 (MGI:5883203|PMID:24910439) |
RGD |
PMID:24275493 PMID:24910439 PMID:21873635 |
MGI:5883203, RGD:13792537 |
NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
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G |
Dhx9 |
DExH-box helicase 9 |
involved_in |
ISO |
(PMID:28221134) |
RGD |
PMID:28221134 |
|
NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
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Esrp1 |
epithelial splicing regulatory protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:1924661 (MGI:5699497|PMID:26371508) |
RGD |
PMID:26371508 |
MGI:5699497 |
NCBI chr 5:24,427,611...24,482,157
Ensembl chr 5:24,428,717...24,482,062
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G |
Esrp2 |
epithelial splicing regulatory protein 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1917326 (MGI:5699497|PMID:26371508) |
Ensembl RGD |
PMID:26371508 |
GO_REF:0000107 MGI:5699497 |
NCBI chr19:34,034,559...34,041,726
Ensembl chr19:34,034,559...34,041,726
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G |
Hnrnpa1 |
heterogeneous nuclear ribonucleoprotein A1 |
acts_upstream_of_or_within |
ISO |
(MGI:3575934|PMID:15798186) |
RGD |
PMID:15798186 |
MGI:3575934 |
NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
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Hnrnpm |
heterogeneous nuclear ribonucleoprotein M |
involved_in |
ISO |
(PMID:19874820) |
RGD |
PMID:19874820 |
|
NCBI chr 7:14,438,703...14,476,781
Ensembl chr 7:14,438,688...14,476,762
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Insr |
insulin receptor |
|
IEP |
|
RGD |
PMID:23633480 |
RGD:9685423 |
NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
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G |
Kdm1a |
lysine demethylase 1A |
|
IEP |
|
RGD |
PMID:20164337 |
RGD:9588288 |
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
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|
G |
Mbnl1 |
muscleblind-like splicing regulator 1 |
acts_upstream_of_or_within |
ISO |
MGI:3052922 (MGI:3821939|PMID:19075228), (MGI:5009479|PMID:19720736) |
RGD |
PMID:19075228 PMID:19720736 |
MGI:3821939 MGI:5009479 |
NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368
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G |
Pqbp1 |
polyglutamine binding protein 1 |
involved_in |
ISO IBA ISS |
(PMID:23512658) PMID:21873635 (MGI:5477858|PMID:23512658) GO_REF:0000024 |
RGD UniProt |
PMID:23512658 PMID:21873635 |
GO_REF:0000024 MGI:5477858, RGD:13792537 |
NCBI chr X:14,603,516...14,608,091
Ensembl chr X:14,603,539...14,608,087
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G |
Puf60 |
poly-U binding splicing factor 60 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:107,782,770...107,793,814
Ensembl chr 7:107,782,770...107,794,531
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G |
Rbfox2 |
RNA binding fox-1 homolog 2 |
acts_upstream_of_or_within |
ISO |
MGI:6442563 (MGI:6402838|PMID:32109384) |
RGD |
PMID:32109384 |
MGI:6402838 |
NCBI chr 7:108,810,627...109,054,420
Ensembl chr 7:108,810,628...109,054,691
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G |
Rbm17 |
RNA binding motif protein 17 |
involved_in |
ISO IBA |
(PMID:17589525) PMID:21873635 |
RGD |
PMID:17589525 PMID:21873635 |
RGD:13792537 |
NCBI chr17:66,937,140...66,954,034
Ensembl chr17:66,937,140...66,954,014
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G |
Rsrc1 |
arginine and serine rich coiled-coil 1 |
involved_in acts_upstream_of_or_within |
IBA IEA ISO |
PMID:21873635 GO_REF:0000002 (MGI:3575934|PMID:15798186) |
InterPro RGD |
PMID:15798186 PMID:21873635 |
GO_REF:0000002 MGI:3575934, RGD:13792537 |
NCBI chr 2:151,226,821...151,632,771
Ensembl chr 2:151,231,156...151,632,765
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G |
Sfpq |
splicing factor proline and glutamine rich |
involved_in |
ISO IBA |
(PMID:19874820) PMID:21873635 |
RGD |
PMID:19874820 PMID:21873635 |
RGD:13792537 |
NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472
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G |
Sfswap |
splicing factor SWAP |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:84585|PMID:8940107) |
Ensembl RGD |
PMID:8940107 |
GO_REF:0000107 MGI:84585 |
NCBI chr12:27,109,607...27,179,941
Ensembl chr12:27,109,611...27,179,884
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Slu7 |
SLU7 homolog, splicing factor |
involved_in |
ISO ISS |
(PMID:15728250) PMID:15181151 |
RGD |
PMID:15728250 PMID:15181151 |
RGD:1304333 |
NCBI chr10:27,908,325...27,923,784
Ensembl chr10:27,908,396...27,923,349
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G |
Smptb |
polypyrimidine tract-binding protein |
|
IDA |
|
RGD |
PMID:12578833 |
RGD:1299129 |
NCBI chr X:16,609,016...16,610,898
Ensembl chr X:16,606,597...16,610,874
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G |
Srsf1 |
serine and arginine rich splicing factor 1 |
involved_in |
IMP IBA ISO |
PMID:21873635 (PMID:8940107) |
RGD |
PMID:8940107 PMID:23462647 PMID:21873635 |
RGD:11038736, RGD:13792537 |
NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336
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G |
Srsf6 |
serine and arginine rich splicing factor 6 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:22767602) |
UniProt RGD |
PMID:22767602 |
GO_REF:0000024 |
NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
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G |
Srsf9 |
serine and arginine rich splicing factor 9 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr12:41,278,225...41,284,502
Ensembl chr12:41,275,687...41,284,499
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|
G |
Strap |
serine/threonine kinase receptor associated protein |
involved_in |
ISO |
(MGI:6490747|PMID:33230114) |
RGD |
PMID:33230114 |
MGI:6490747 |
NCBI chr 4:170,646,042...170,660,291
Ensembl chr 4:170,646,001...170,660,828
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|
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G |
Adar |
adenosine deaminase, RNA-specific |
acts_upstream_of_or_within |
ISO |
(PMID:9020165) |
RGD |
PMID:9020165 |
|
NCBI chr 2:175,138,391...175,178,280
Ensembl chr 2:175,138,403...175,178,282
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|
G |
Adarb1 |
adenosine deaminase, RNA-specific, B1 |
involved_in |
IDA ISO |
(PMID:32220291) |
RGD |
PMID:32220291 PMID:10836790 |
RGD:10450892 |
NCBI chr20:11,222,569...11,350,854
Ensembl chr20:11,222,583...11,350,852
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G |
Fbl |
fibrillarin |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:83,469,832...83,478,932
Ensembl chr 1:83,469,832...83,478,932
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G |
Fbll1 |
fibrillarin-like 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:20,258,656...20,260,299
Ensembl chr10:20,258,656...20,260,299
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G |
Larp7 |
La ribonucleoprotein 7, transcriptional regulator |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (MGI:6400674|PMID:32017896) (PMID:32017898) |
UniProt Ensembl RGD |
PMID:32017896 PMID:32017898 |
GO_REF:0000024 GO_REF:0000107 MGI:6400674 |
NCBI chr 2:215,997,641...216,012,833
Ensembl chr 2:215,997,649...216,012,865
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G |
Dkc1 |
dyskerin pseudouridine synthase 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
|
|
G |
Parn |
poly(A)-specific ribonuclease |
involved_in |
ISO |
(PMID:22442037) |
RGD |
PMID:22442037 |
|
NCBI chr10:1,410,636...1,548,573
Ensembl chr10:1,410,642...1,548,560
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|
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G |
Cmtr1 |
cap methyltransferase 1 |
involved_in |
ISO IBA IEA ISS |
(PMID:21310715) PMID:21873635 GO_REF:0000104 GO_REF:0000024 |
RGD UniProt |
PMID:21310715 PMID:21873635 |
GO_REF:0000024 GO_REF:0000104, RGD:13792537 |
NCBI chr20:7,722,729...7,782,579
Ensembl chr20:7,709,713...7,766,302
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G |
Cmtr2 |
cap methyltransferase 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr19:38,190,718...38,197,549
Ensembl chr19:38,190,642...38,197,804
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G |
Cmtr2 |
cap methyltransferase 2 |
involved_in |
ISO IBA |
(PMID:21310715) PMID:21873635 |
RGD |
PMID:21310715 PMID:21873635 |
RGD:13792537 |
NCBI chr19:38,190,718...38,197,549
Ensembl chr19:38,190,642...38,197,804
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|
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G |
Bop1 |
BOP1 ribosomal biogenesis factor |
involved_in |
ISO |
(MGI:3843427|PMID:17353269) |
RGD |
PMID:17353269 |
MGI:3843427 |
NCBI chr 7:108,172,062...108,195,875
Ensembl chr 7:108,172,066...108,195,931
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G |
Nol9 |
nucleolar protein 9 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:162,546,522...162,566,625
Ensembl chr 5:162,546,541...162,566,191
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G |
Npm1 |
nucleophosmin 1 |
|
IDA |
|
RGD |
PMID:9742256 |
RGD:11535027 |
NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
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|
|
G |
Mtfmt |
mitochondrial methionyl-tRNA formyltransferase |
involved_in |
ISO IEA IBA ISS |
(PMID:25288793) GO_REF:0000107 PMID:21873635 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:25288793 PMID:21873635 |
GO_REF:0000024 GO_REF:0000107, RGD:13792537 |
NCBI chr 8:65,953,787...65,971,841
Ensembl chr 8:65,953,767...65,971,841
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G |
Sepsecs |
Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase |
involved_in |
IEA |
GO_REF:0000104 |
UniProt |
|
GO_REF:0000104 |
NCBI chr14:58,311,484...58,341,745
Ensembl chr14:58,311,499...58,341,740
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|
|
G |
Csde1 |
cold shock domain containing E1 |
involved_in |
ISO IEA |
(PMID:11051545) GO_REF:0000107 |
RGD Ensembl |
PMID:11051545 |
GO_REF:0000107 |
NCBI chr 2:190,546,015...190,582,790
Ensembl chr 2:190,554,980...190,582,784
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|
G |
Dhx9 |
DExH-box helicase 9 |
involved_in |
ISO |
(PMID:19029303) |
RGD |
PMID:19029303 |
|
NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
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G |
Hnrnpd |
heterogeneous nuclear ribonucleoprotein D |
involved_in |
ISO |
(PMID:11051545) |
RGD |
PMID:11051545 |
|
NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
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G |
Hnrnpu |
heterogeneous nuclear ribonucleoprotein U |
involved_in |
IEA ISO IBA |
GO_REF:0000107 (PMID:19029303) PMID:21873635 |
Ensembl RGD |
PMID:19029303 PMID:21873635 |
GO_REF:0000107, RGD:13792537 |
NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
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|
G |
Igf2bp1 |
insulin-like growth factor 2 mRNA binding protein 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:19029303), (PMID:29476152) |
UniProt RGD |
PMID:19029303 PMID:29476152 |
GO_REF:0000024 |
NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129
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G |
Igf2bp2 |
insulin-like growth factor 2 mRNA binding protein 2 |
involved_in |
ISO |
(PMID:29476152) |
RGD |
PMID:29476152 |
|
NCBI chr11:78,874,402...78,974,392
Ensembl chr11:78,874,414...78,974,377
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G |
Igf2bp3 |
insulin-like growth factor 2 mRNA binding protein 3 |
involved_in |
ISO |
(PMID:29476152) |
RGD |
PMID:29476152 |
|
NCBI chr 4:78,060,494...78,195,007
Ensembl chr 4:78,060,494...78,194,865
|
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G |
Pabpc1 |
poly(A) binding protein, cytoplasmic 1 |
involved_in |
ISO |
(PMID:11051545) |
RGD |
PMID:11051545 |
|
NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744
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G |
Paip1 |
poly(A) binding protein interacting protein 1 |
involved_in |
ISO |
(PMID:11051545) |
RGD |
PMID:11051545 |
|
NCBI chr 2:51,523,142...51,550,241
Ensembl chr 2:51,522,921...51,550,241
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G |
Syncrip |
synaptotagmin binding, cytoplasmic RNA interacting protein |
involved_in |
IBA IEA ISO |
PMID:21873635 GO_REF:0000107 (PMID:11051545), (PMID:19029303) |
Ensembl RGD |
PMID:11051545 PMID:19029303 PMID:21873635 |
GO_REF:0000107, RGD:13792537 |
NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515
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G |
Ybx1 |
Y box binding protein 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:19029303) |
UniProt RGD |
PMID:19029303 |
GO_REF:0000024 |
NCBI chr 5:132,882,137...132,899,108
Ensembl chr 5:132,882,145...132,898,862
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|
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G |
Dis3 |
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease |
involved_in |
ISO |
(PMID:19056938) |
RGD |
PMID:19056938 |
|
NCBI chr15:75,820,040...75,850,450
Ensembl chr15:75,823,436...75,850,642
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G |
Exosc10 |
exosome component 10 |
involved_in |
ISO |
(PMID:19056938) |
RGD |
PMID:19056938 |
|
NCBI chr 5:158,995,318...159,018,946
Ensembl chr 5:158,995,313...159,018,940
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G |
Exosc2 |
exosome component 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:14,962,930...14,973,645
Ensembl chr 3:14,962,917...14,973,575
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G |
Exosc3 |
exosome component 3 |
involved_in |
ISO IBA |
(PMID:19056938) PMID:21873635 |
RGD |
PMID:19056938 PMID:21873635 |
RGD:13792537 |
NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060
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A1cf |
APOBEC1 complementation factor |
involved_in acts_upstream_of_or_within |
IMP ISO IEA TAS |
(MGI:6331191|PMID:30309881), (MGI:7387172|PMID:30844405) (PMID:24916387), (PMID:30844405) MGI:103298 (MGI:5613094|PMID:24916387) GO_REF:0000107 PMID:12896982 |
RGD Ensembl |
PMID:24916387 PMID:30309881 PMID:30844405 PMID:10669759 PMID:12896982 |
GO_REF:0000107 MGI:5613094 MGI:6331191 MGI:7387172, RGD:9587747, RGD:8553404 |
NCBI chr 1:229,736,037...229,823,499
Ensembl chr 1:229,736,106...229,824,354
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G |
Aicda |
activation-induced cytidine deaminase |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:155,774,132...155,783,972
Ensembl chr 4:155,774,132...155,783,972
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G |
Apobec1 |
apolipoprotein B mRNA editing enzyme catalytic subunit 1 |
involved_in acts_upstream_of_or_within |
IDA IEA IBA ISO |
GO_REF:0000107 PMID:21873635 (MGI:7387172|PMID:30844405) (PMID:24916387), (PMID:30844405) MGI:1917115|MGI:2157378|MGI:2384294 (MGI:2157316|PMID:8692961), (MGI:5613094|PMID:24916387) |
Ensembl RGD |
PMID:8692961 PMID:24916387 PMID:30844405 PMID:12020819 PMID:21873635 |
GO_REF:0000107 MGI:2157316 MGI:5613094 MGI:7387172, RGD:625559, RGD:13792537 |
NCBI chr 4:155,800,030...155,828,515
Ensembl chr 4:155,800,887...155,827,390
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G |
Apobec2 |
apolipoprotein B mRNA editing enzyme catalytic subunit 2 |
acts_upstream_of_or_within involved_in |
ISO IBA |
(MGI:1340097|PMID:10403781) PMID:21873635 (PMID:10403781) |
RGD |
PMID:10403781 PMID:21873635 |
MGI:1340097, RGD:13792537 |
NCBI chr 9:12,564,955...12,578,461
Ensembl chr 9:12,564,920...12,578,458
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G |
Apobec3 |
apolipoprotein B mRNA editing enzyme catalytic subunit 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:111,433,789...111,453,032
Ensembl chr 7:111,433,764...111,452,922
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G |
Rbm47 |
RNA binding motif protein 47 |
acts_upstream_of_or_within involved_in |
ISO |
MGI:103298 (MGI:5613094|PMID:24916387) (MGI:6331191|PMID:30309881), (MGI:7387172|PMID:30844405) (PMID:24916387), (PMID:30844405) |
RGD |
PMID:24916387 PMID:30309881 PMID:30844405 |
MGI:5613094 MGI:6331191 MGI:7387172 |
NCBI chr14:42,053,290...42,191,572
Ensembl chr14:42,154,142...42,189,431
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G |
Aplp1 |
amyloid beta precursor like protein 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:3610697|PMID:16314516) GO_REF:0000107 |
RGD Ensembl |
PMID:16314516 |
GO_REF:0000107 MGI:3610697 |
NCBI chr 1:85,696,880...85,707,215
Ensembl chr 1:85,696,882...85,707,155
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|
G |
App |
amyloid beta precursor protein |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:3610697|PMID:16314516) GO_REF:0000107 |
RGD Ensembl |
PMID:16314516 |
GO_REF:0000107 MGI:3610697 |
NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
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G |
Pabpc1l |
poly(A) binding protein, cytoplasmic 1-like |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:5437740 (MGI:5437387|PMID:22621333) GO_REF:0000107 |
RGD Ensembl |
PMID:22621333 |
GO_REF:0000107 MGI:5437387 |
NCBI chr 3:152,692,825...152,725,997
Ensembl chr 3:152,693,700...152,725,997
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G |
Papola |
poly (A) polymerase alpha |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:5004778|PMID:18084034) GO_REF:0000107 |
RGD Ensembl |
PMID:18084034 |
GO_REF:0000107 MGI:5004778 |
NCBI chr 6:124,682,015...124,734,706
Ensembl chr 6:124,682,105...124,734,468
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G |
Cnot7 |
CCR4-NOT transcription complex, subunit 7 |
acts_upstream_of_or_within involved_in |
ISO |
MGI:109382 (MGI:3807625|PMID:18625844) (PMID:31439799) |
RGD |
PMID:18625844 PMID:31439799 |
MGI:3807625 |
NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
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G |
Dcp1a |
decapping mRNA 1A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:5,656,788...5,702,151
Ensembl chr16:5,656,773...5,702,140
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G |
Dcp1b |
decapping mRNA 1B |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:152,358,267...152,395,747
Ensembl chr 4:152,358,241...152,397,145
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G |
Dcp2 |
decapping mRNA 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557
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G |
Dcps |
decapping enzyme, scavenger |
involved_in |
IBA IEA |
PMID:21873635 GO_REF:0000104 GO_REF:0000002 |
UniProt InterPro |
PMID:21873635 |
GO_REF:0000002 GO_REF:0000104, RGD:13792537 |
NCBI chr 8:33,468,669...33,524,407
Ensembl chr 8:33,415,671...33,524,389
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G |
LOC100912393 |
mRNA-decapping enzyme 2-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
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G |
LOC103690064 |
m7GpppN-mRNA hydrolase-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
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G |
Lsm1 |
LSM1 homolog, mRNA degradation associated |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:66,277,345...66,288,852
Ensembl chr16:66,277,345...66,288,852
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G |
Noct |
nocturnin |
acts_upstream_of_or_within |
ISO |
MGI:1298230 (MGI:3807625|PMID:18625844) |
RGD |
PMID:18625844 |
MGI:3807625 |
NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400
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G |
Pan3 |
poly(A) specific ribonuclease subunit PAN3 |
acts_upstream_of_or_within |
ISO |
(MGI:3807625|PMID:18625844) |
RGD |
PMID:18625844 |
MGI:3807625 |
NCBI chr12:7,476,707...7,595,380
Ensembl chr12:7,476,697...7,599,204
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G |
Patl1 |
PAT1 homolog 1, processing body mRNA decay factor |
involved_in |
ISO IEA IBA ISS |
(PMID:20584987), (PMID:20852261) GO_REF:0000002 PMID:21873635 GO_REF:0000024 |
RGD InterPro UniProt |
PMID:20584987 PMID:20852261 PMID:21873635 |
GO_REF:0000002 GO_REF:0000024, RGD:13792537 |
NCBI chr 1:208,831,115...208,862,904
Ensembl chr 1:208,831,115...208,862,857
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G |
Patl2 |
PAT1 homolog 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:109,072,958...109,087,425
Ensembl chr 3:109,075,290...109,083,253
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G |
St3gal4 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 4 |
involved_in |
IEA |
GO_REF:0000002 GO_REF:0000104 |
InterPro UniProt |
|
GO_REF:0000002 GO_REF:0000104 |
NCBI chr 8:33,415,666...33,465,365
Ensembl chr 8:33,415,671...33,524,389
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G |
Dcp1a |
decapping mRNA 1A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:5,656,788...5,702,151
Ensembl chr16:5,656,773...5,702,140
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G |
Dcp1b |
decapping mRNA 1B |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:152,358,267...152,395,747
Ensembl chr 4:152,358,241...152,397,145
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G |
Edc3 |
enhancer of mRNA decapping 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 8:58,106,129...58,151,685
Ensembl chr 8:58,106,175...58,151,671
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G |
Edc4 |
enhancer of mRNA decapping 4 |
involved_in |
IEA IBA |
GO_REF:0000002 PMID:21873635 |
InterPro |
PMID:21873635 |
GO_REF:0000002, RGD:13792537 |
NCBI chr19:33,774,062...33,786,054
Ensembl chr19:33,774,055...33,787,758
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G |
Dna2 |
DNA replication helicase/nuclease 2 |
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319
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G |
Fen1 |
flap structure-specific endonuclease 1 |
involved_in |
ISO |
(PMID:18995831) |
RGD |
PMID:18995831 |
|
NCBI chr 1:206,845,126...206,849,821
Ensembl chr 1:206,844,884...206,850,003
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G |
Rnaseh1 |
ribonuclease H1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 6:45,282,849...45,292,258
Ensembl chr 6:45,282,854...45,292,236
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G |
Rnaseh2a |
ribonuclease H2, subunit A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr19:23,186,325...23,196,045
Ensembl chr19:23,186,383...23,196,041
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G |
Slc25a16 |
solute carrier family 25 member 16 |
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
|
GO_REF:0000107 |
NCBI chr20:25,661,158...25,717,558
Ensembl chr20:25,662,055...25,716,319
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G |
Helb |
DNA helicase B |
involved_in |
ISO |
(PMID:12181327) |
RGD |
PMID:12181327 |
|
NCBI chr 7:55,588,510...55,615,979
Ensembl chr 7:55,588,798...55,615,585
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G |
Pola1 |
DNA polymerase alpha 1, catalytic subunit |
involved_in |
ISO IEA ISS |
(PMID:2175912), (PMID:27019227), (PMID:8026492) (MGI:6478526|PMID:8026492) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:2175912 PMID:8026492 PMID:27019227 |
GO_REF:0000024 GO_REF:0000107 MGI:6478526 |
NCBI chr X:58,034,617...58,348,612
Ensembl chr X:58,034,619...58,348,536
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G |
Pola2 |
DNA polymerase alpha 2, accessory subunit |
involved_in |
ISO IEA |
(PMID:8026492) GO_REF:0000107 (MGI:6478526|PMID:8026492) |
RGD Ensembl |
PMID:8026492 |
GO_REF:0000107 MGI:6478526 |
NCBI chr 1:203,227,183...203,251,350
Ensembl chr 1:203,203,388...203,251,348
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G |
Polrmt |
RNA polymerase mitochondrial |
involved_in |
IEA |
GO_REF:0000108 |
GOC |
|
GO_REF:0000108 |
NCBI chr 7:9,959,532...9,969,791
Ensembl chr 7:9,959,576...9,969,791
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G |
Prim1 |
DNA primase subunit 1 |
involved_in |
ISO |
(MGI:6478526|PMID:8026492) (PMID:26975377), (PMID:8026492) |
RGD |
PMID:8026492 PMID:26975377 |
MGI:6478526 |
NCBI chr 7:446,342...462,526
Ensembl chr 7:431,805...462,526
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G |
Prim2 |
DNA primase subunit 2 |
involved_in |
ISO IBA IEA |
(PMID:8026492) PMID:21873635 (MGI:6478526|PMID:8026492) GO_REF:0000043 |
RGD UniProt |
PMID:8026492 PMID:21873635 |
GO_REF:0000043 MGI:6478526, RGD:13792537 |
NCBI chr 9:35,692,376...35,904,521
Ensembl chr 9:35,692,376...35,903,030
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G |
Primpol |
primase and DNA directed polymerase |
involved_in |
IEA |
GO_REF:0000108 |
GOC |
|
GO_REF:0000108 |
NCBI chr16:45,681,252...45,715,758
Ensembl chr16:45,681,326...45,715,565
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G |
Ell3 |
elongation factor for RNA polymerase II 3 |
involved_in |
ISO |
(PMID:10882741) |
RGD |
PMID:10882741 |
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NCBI chr 3:108,413,035...108,417,181
Ensembl chr 3:108,410,448...108,417,132
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G |
Ak6 |
adenylate kinase 6 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 2:31,794,316...31,806,375
Ensembl chr 2:31,794,519...31,806,371 Ensembl chr20:31,794,519...31,806,371
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G |
Brf1 |
BRF1, RNA polymerase III transcription initiation factor subunit |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 6:132,034,380...132,081,296
Ensembl chr 6:132,037,272...132,081,278
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G |
Brf2 |
BRF2, RNA polymerase III transcription initiation factor subunit |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:64,928,334...64,933,057
Ensembl chr16:64,928,300...64,933,059
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G |
Myc |
MYC proto-oncogene, bHLH transcription factor |
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IDA |
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RGD |
PMID:3306601 |
RGD:69897 |
NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
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G |
Ncoa6 |
nuclear receptor coactivator 6 |
involved_in |
ISO IEA |
(PMID:10567404) GO_REF:0000107 |
RGD Ensembl |
PMID:10567404 |
GO_REF:0000107 |
NCBI chr 3:143,890,896...143,961,916
Ensembl chr 3:143,890,896...143,952,268
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G |
Polr1f |
RNA polymerase I subunit F |
involved_in |
IEA |
GO_REF:0000104 |
UniProt |
|
GO_REF:0000104 |
NCBI chr 6:50,053,289...50,070,514
Ensembl chr 6:50,053,289...50,070,514
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G |
Polr2g |
RNA polymerase II subunit G |
involved_in |
IEA |
GO_REF:0000104 |
UniProt |
|
GO_REF:0000104 |
NCBI chr 1:205,689,160...205,692,537
Ensembl chr 1:205,689,160...205,692,686
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G |
Rrn3 |
RRN3 homolog, RNA polymerase I transcription factor |
acts_upstream_of_or_within |
ISO |
(MGI:63283|PMID:8413268) |
RGD |
PMID:8413268 |
MGI:63283 |
NCBI chr10:2,129,949...2,165,381
Ensembl chr10:2,129,978...2,165,663
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G |
Rsf1 |
remodeling and spacing factor 1 |
involved_in |
ISO |
(PMID:9836642) |
RGD |
PMID:9836642 |
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NCBI chr 1:151,892,055...152,015,089
Ensembl chr 1:151,892,434...152,009,051
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G |
Smarca5 |
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 |
involved_in |
ISO |
(PMID:9836642) |
RGD |
PMID:9836642 |
|
NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
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G |
Taf10 |
TATA-box binding protein associated factor 10 |
involved_in |
ISO |
(PMID:9212049), (PMID:9603525) |
RGD |
PMID:9212049 PMID:9603525 |
|
NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376
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G |
Taf12 |
TATA-box binding protein associated factor 12 |
involved_in |
ISO |
(PMID:9603525) |
RGD |
PMID:9603525 |
|
NCBI chr 5:144,472,816...144,490,299
Ensembl chr 5:144,472,841...144,488,849
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G |
Taf4 |
TATA-box binding protein associated factor 4 |
involved_in |
ISO |
(PMID:9603525) |
RGD |
PMID:9603525 |
|
NCBI chr 3:167,017,992...167,083,413
Ensembl chr 3:167,017,993...167,083,356
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G |
Taf5 |
TATA-box binding protein associated factor 5 |
involved_in |
ISO |
(PMID:9603525) |
RGD |
PMID:9603525 |
|
NCBI chr 1:245,958,428...245,973,914
Ensembl chr 1:245,958,428...245,973,914
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G |
Taf6 |
TATA-box binding protein associated factor 6 |
involved_in |
ISO |
(PMID:9603525) |
RGD |
PMID:9603525 |
|
NCBI chr12:17,055,864...17,064,244
Ensembl chr12:17,055,873...17,064,247
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G |
Taf7 |
TATA-box binding protein associated factor 7 |
involved_in |
ISO |
(PMID:9603525) |
RGD |
PMID:9603525 |
|
NCBI chr18:29,459,937...29,462,086
Ensembl chr18:29,452,943...29,462,134
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G |
Taf9 |
TATA-box binding protein associated factor 9 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769
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G |
Taf9b |
TATA-box binding protein associated factor 9b |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr X:71,289,290...71,300,142
Ensembl chr X:71,289,290...71,300,604
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G |
Tbp |
TATA box binding protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:56,463,330...56,480,430
Ensembl chr 1:56,463,618...56,510,016
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G |
Tbpl1 |
TATA-box binding protein like 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:22,777,892...22,803,305
Ensembl chr 1:22,778,459...22,803,122 Ensembl chr 1:22,778,459...22,803,122
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G |
Tbpl2 |
TATA box binding protein-like 2 |
involved_in |
IBA IEA |
PMID:21873635 GO_REF:0000002 |
InterPro |
PMID:21873635 |
GO_REF:0000002, RGD:13792537 |
NCBI chr 3:6,772,419...6,793,213
Ensembl chr 3:6,772,419...6,793,231
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G |
Taf8 |
TATA-box binding protein associated factor 8 |
acts_upstream_of_or_within |
ISO |
(PMID:14580349) |
RGD |
PMID:14580349 |
|
NCBI chr 9:13,491,892...13,511,713
Ensembl chr 9:13,491,937...13,511,717
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G |
Dhx9 |
DExH-box helicase 9 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
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G |
ENSRNOG00000063939 |
|
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
Ensembl chr15:43,363,981...43,364,769
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G |
Mterf1 |
mitochondrial transcription termination factor 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:20550934) |
UniProt RGD |
PMID:20550934 |
GO_REF:0000024 |
NCBI chr 4:30,226,345...30,233,402
Ensembl chr 4:30,226,343...30,233,584
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G |
Polr2a |
RNA polymerase II subunit A |
involved_in |
ISO |
(PMID:26700805) |
RGD |
PMID:26700805 |
|
NCBI chr10:54,452,438...54,478,486
Ensembl chr10:54,452,441...54,478,455
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G |
Prmt5 |
protein arginine methyltransferase 5 |
involved_in |
ISO |
(PMID:26700805) |
RGD |
PMID:26700805 |
|
NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296
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G |
Setx |
senataxin |
involved_in |
ISO |
(PMID:26700805) |
RGD |
PMID:26700805 |
|
NCBI chr 3:12,428,091...12,480,801
Ensembl chr 3:12,427,635...12,480,803
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G |
Smn1 |
survival of motor neuron 1, telomeric |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:26700805) |
UniProt RGD |
PMID:26700805 |
GO_REF:0000024 |
NCBI chr 2:31,490,018...31,501,065
Ensembl chr 2:31,490,015...31,501,060
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G |
Wdr82 |
WD repeat domain 82 |
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
|
GO_REF:0000043 |
NCBI chr 8:106,814,569...106,834,535
Ensembl chr 8:106,814,569...106,834,438
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G |
Abt1 |
activator of basal transcription 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr17:41,699,151...41,701,253
Ensembl chr17:41,699,147...41,701,259
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G |
Fcf1 |
Fcf1 rRNA-processing protein |
acts_upstream_of_or_within |
ISO |
(MGI:5617283|PMID:25190460) |
RGD |
PMID:25190460 |
MGI:5617283 |
NCBI chr 6:104,617,780...104,629,643
Ensembl chr 6:104,617,770...104,629,643
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G |
Nop9 |
NOP9 nucleolar protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr15:29,243,853...29,252,220
Ensembl chr15:29,243,862...29,252,220
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G |
Rcl1 |
RNA terminal phosphate cyclase-like 1 |
acts_upstream_of_or_within |
ISO |
(MGI:5617283|PMID:25190460) |
RGD |
PMID:25190460 |
MGI:5617283 |
NCBI chr 1:226,824,524...226,869,046
Ensembl chr 1:226,824,534...226,902,315
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G |
Tbl3 |
transducin (beta)-like 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:13,726,127...13,731,340
Ensembl chr10:13,726,129...13,731,372
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G |
Utp23 |
UTP23, small subunit processome component |
acts_upstream_of_or_within |
ISO |
(MGI:5617283|PMID:25190460) |
RGD |
PMID:25190460 |
MGI:5617283 |
NCBI chr 7:83,185,187...83,196,652
Ensembl chr 7:83,189,656...83,196,655
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G |
Abt1 |
activator of basal transcription 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr17:41,699,151...41,701,253
Ensembl chr17:41,699,147...41,701,259
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G |
AC135409.1 |
|
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 8:46,606,877...46,607,131
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G |
Fcf1 |
Fcf1 rRNA-processing protein |
acts_upstream_of_or_within |
ISO |
(MGI:5617283|PMID:25190460) |
RGD |
PMID:25190460 |
MGI:5617283 |
NCBI chr 6:104,617,780...104,629,643
Ensembl chr 6:104,617,770...104,629,643
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G |
Nop9 |
NOP9 nucleolar protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr15:29,243,853...29,252,220
Ensembl chr15:29,243,862...29,252,220
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G |
Rcl1 |
RNA terminal phosphate cyclase-like 1 |
acts_upstream_of_or_within |
ISO |
(MGI:5617283|PMID:25190460) |
RGD |
PMID:25190460 |
MGI:5617283 |
NCBI chr 1:226,824,524...226,869,046
Ensembl chr 1:226,824,534...226,902,315
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G |
Rpp40 |
ribonuclease P/MRP subunit p40 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr17:28,947,730...28,956,790
Ensembl chr17:28,947,734...28,956,788
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G |
Rps21 |
ribosomal protein S21 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:167,346,437...167,347,459
Ensembl chr 3:167,346,201...167,347,470
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G |
Rps21-ps1 |
ribosomal protein S21, pseudogene 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:153,387,133...153,387,476
Ensembl chr 5:153,387,176...153,387,427
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G |
Rrs1 |
ribosome biogenesis regulator 1 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:9,733,486...9,735,119
Ensembl chr 5:9,733,091...9,735,140
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G |
Bms1 |
BMS1 ribosome biogenesis factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:151,558,163...151,595,187
Ensembl chr 4:151,558,163...151,595,127
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G |
Rcl1 |
RNA terminal phosphate cyclase-like 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:226,824,524...226,869,046
Ensembl chr 1:226,824,534...226,902,315
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G |
Sde2 |
SDE2 telomere maintenance homolog |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:34365507) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:34365507 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:92,578,843...92,595,142
Ensembl chr13:92,578,874...92,595,140
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G |
Tsr1 |
TSR1, ribosome maturation factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:59,760,420...59,771,868
Ensembl chr10:59,760,409...59,771,864
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G |
AC135409.1 |
|
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 8:46,606,877...46,607,131
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G |
Rps21 |
ribosomal protein S21 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:167,346,437...167,347,459
Ensembl chr 3:167,346,201...167,347,470
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G |
Rps21-ps1 |
ribosomal protein S21, pseudogene 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:153,387,133...153,387,476
Ensembl chr 5:153,387,176...153,387,427
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Abt1 |
activator of basal transcription 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr17:41,699,151...41,701,253
Ensembl chr17:41,699,147...41,701,259
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G |
Nop9 |
NOP9 nucleolar protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr15:29,243,853...29,252,220
Ensembl chr15:29,243,862...29,252,220
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G |
Tbl3 |
transducin (beta)-like 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:13,726,127...13,731,340
Ensembl chr10:13,726,129...13,731,372
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G |
Dkc1 |
dyskerin pseudouridine synthase 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:25219674) |
UniProt RGD |
PMID:25219674 |
GO_REF:0000024 |
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G |
Rpusd1 |
RNA pseudouridine synthase domain containing 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:14,751,310...14,755,213
Ensembl chr10:14,751,384...14,755,207
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G |
Rpusd2 |
RNA pseudouridine synthase domain containing 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:106,017,759...106,023,010
Ensembl chr 3:106,017,864...106,023,251
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G |
Tsr3 |
TSR3 ribosome maturation factor |
involved_in |
ISO |
(PMID:27084949) |
RGD |
PMID:27084949 |
|
NCBI chr10:14,257,150...14,259,712
Ensembl chr10:14,257,171...14,259,561
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G |
Cnot6 |
CCR4-NOT transcription complex, subunit 6 |
involved_in |
ISO IEA ISS |
(PMID:20065043) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:20065043 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:33,978,785...34,031,025
Ensembl chr10:33,980,831...34,031,025
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G |
Cnot7 |
CCR4-NOT transcription complex, subunit 7 |
involved_in |
ISO IBA |
(PMID:20065043), (PMID:21336257) PMID:21873635 |
RGD |
PMID:20065043 PMID:21336257 PMID:21873635 |
RGD:13792537 |
NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
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G |
Cnot8 |
CCR4-NOT transcription complex, subunit 8 |
involved_in |
ISO IBA |
(PMID:20065043) PMID:21873635 |
RGD |
PMID:20065043 PMID:21873635 |
RGD:13792537 |
NCBI chr10:42,281,614...42,294,740
Ensembl chr10:42,281,722...42,294,730
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G |
Exosc2 |
exosome component 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:14,962,930...14,973,645
Ensembl chr 3:14,962,917...14,973,575
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G |
Exosc3 |
exosome component 3 |
involved_in |
ISO IBA |
(PMID:11782436) PMID:21873635 |
RGD |
PMID:11782436 PMID:21873635 |
RGD:13792537 |
NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060
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G |
Exosc5 |
exosome component 5 |
involved_in |
ISO |
(PMID:11782436) |
RGD |
PMID:11782436 |
|
NCBI chr 1:81,168,128...81,177,266
Ensembl chr 1:81,166,023...81,177,265
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G |
Exosc7 |
exosome component 7 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 8:122,773,607...122,798,943
Ensembl chr 8:122,773,591...122,799,270
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G |
Exosc8 |
exosome component 8 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:138,930,405...138,937,009
Ensembl chr 2:138,930,405...138,936,928
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G |
Exosc9 |
exosome component 9 |
involved_in |
ISO IBA |
(PMID:11782436) PMID:21873635 |
RGD |
PMID:11782436 PMID:21873635 |
RGD:13792537 |
NCBI chr 2:119,416,028...119,426,981
Ensembl chr 2:119,388,715...119,427,051
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Eri1 |
exoribonuclease 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:56,724,101...56,744,228
Ensembl chr16:56,724,115...56,744,226
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G |
Eri2 |
ERI1 exoribonuclease family member 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:174,140,831...174,168,757
Ensembl chr 1:174,141,993...174,168,665
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G |
Eri3 |
ERI1 exoribonuclease family member 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:131,016,146...131,143,347
Ensembl chr 5:131,016,126...131,143,329
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G |
Exosc10 |
exosome component 10 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:158,995,318...159,018,946
Ensembl chr 5:158,995,313...159,018,940
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G |
Exosc2 |
exosome component 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:14,962,930...14,973,645
Ensembl chr 3:14,962,917...14,973,575
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G |
Exosc3 |
exosome component 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060
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G |
Exosc7 |
exosome component 7 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 8:122,773,607...122,798,943
Ensembl chr 8:122,773,591...122,799,270
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G |
Exosc8 |
exosome component 8 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:138,930,405...138,937,009
Ensembl chr 2:138,930,405...138,936,928
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G |
Exosc9 |
exosome component 9 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:119,416,028...119,426,981
Ensembl chr 2:119,388,715...119,427,051
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G |
RGD1560857 |
similar to RIKEN cDNA 2900016D05 |
involved_in |
IEA |
GO_REF:0000104 |
UniProt |
|
GO_REF:0000104 |
NCBI chr16:21,108,807...21,109,887
Ensembl chr16:21,108,942...21,109,883
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G |
Xab2 |
XPA binding protein 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr12:1,667,672...1,679,702
Ensembl chr12:1,667,672...1,679,692
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G |
Yju2 |
YJU2 splicing factor |
involved_in |
IEA |
GO_REF:0000104 |
UniProt |
|
GO_REF:0000104 |
NCBI chr 9:789,603...799,505
Ensembl chr 9:789,606...799,496
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G |
Isy1 |
ISY1 splicing factor homolog |
involved_in |
IBA IEA |
PMID:21873635 GO_REF:0000002 |
InterPro |
PMID:21873635 |
GO_REF:0000002, RGD:13792537 |
NCBI chr 4:120,276,535...120,297,227
Ensembl chr 4:120,276,292...120,297,188
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G |
Prpf18 |
pre-mRNA processing factor 18 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr17:73,630,560...73,661,210
Ensembl chr17:73,630,571...73,690,979
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G |
Atm |
ATM serine/threonine kinase |
involved_in |
ISO |
(PMID:16086026) |
RGD |
PMID:16086026 |
|
NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
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G |
Dcp2 |
decapping mRNA 2 |
involved_in |
ISO |
(PMID:18172165) |
RGD |
PMID:18172165 |
|
NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557
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G |
Eri1 |
exoribonuclease 1 |
NOT|involved_in |
ISS ISO |
GO_REF:0000024 (PMID:18172165) |
UniProt RGD |
PMID:18172165 |
GO_REF:0000024 |
NCBI chr16:56,724,101...56,744,228
Ensembl chr16:56,724,115...56,744,226
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G |
Exosc10 |
exosome component 10 |
involved_in |
ISO IBA |
(PMID:18172165) PMID:21873635 |
RGD |
PMID:18172165 PMID:21873635 |
RGD:13792537 |
NCBI chr 5:158,995,318...159,018,946
Ensembl chr 5:158,995,313...159,018,940
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G |
Exosc4 |
exosome component 4 |
involved_in |
ISO |
(PMID:18172165) |
RGD |
PMID:18172165 |
|
NCBI chr 7:108,047,831...108,050,573
Ensembl chr 7:108,047,831...108,050,573
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G |
Lsm1 |
LSM1 homolog, mRNA degradation associated |
involved_in |
ISO |
(PMID:18172165) |
RGD |
PMID:18172165 |
|
NCBI chr16:66,277,345...66,288,852
Ensembl chr16:66,277,345...66,288,852
|
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G |
Mtpap |
mitochondrial poly(A) polymerase |
involved_in |
ISO |
(PMID:18172165) |
RGD |
PMID:18172165 |
|
NCBI chr17:53,320,739...53,341,500
Ensembl chr17:53,320,741...53,341,538
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G |
Tent2 |
terminal nucleotidyltransferase 2 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:18172165) |
UniProt Ensembl RGD |
PMID:18172165 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 2:24,380,135...24,432,099
Ensembl chr 2:24,380,225...24,432,099
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G |
Tent4b |
terminal nucleotidyltransferase 4B |
involved_in |
ISO |
(PMID:18172165) |
RGD |
PMID:18172165 |
|
NCBI chr19:18,807,616...18,868,969
Ensembl chr19:18,807,525...18,869,537
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G |
Tut1 |
terminal uridylyl transferase 1, U6 snRNA-specific |
NOT|involved_in |
ISS ISO |
GO_REF:0000024 (PMID:18172165) |
UniProt RGD |
PMID:18172165 |
GO_REF:0000024 |
NCBI chr 1:205,848,691...205,859,767
Ensembl chr 1:205,848,772...205,859,764
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G |
Tut4 |
terminal uridylyl transferase 4 |
NOT|involved_in |
ISO |
(PMID:18172165) |
RGD |
PMID:18172165 |
|
NCBI chr 5:123,201,723...123,306,582
Ensembl chr 5:123,203,003...123,306,465
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G |
Tut7 |
terminal uridylyl transferase 7 |
NOT|involved_in |
ISO |
(PMID:18172165) |
RGD |
PMID:18172165 |
|
NCBI chr17:4,849,287...4,903,542
Ensembl chr17:4,849,283...4,903,169
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|
G |
Upf1 |
UPF1, RNA helicase and ATPase |
involved_in |
ISO |
(PMID:16086026) |
RGD |
PMID:16086026 |
|
NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
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G |
Xrn1 |
5'-3' exoribonuclease 1 |
involved_in |
ISO |
(PMID:18172165) |
RGD |
PMID:18172165 |
|
NCBI chr 8:96,527,871...96,637,385
Ensembl chr 8:96,528,195...96,632,739
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|
G |
Wdr82 |
WD repeat domain 82 |
involved_in |
ISO |
(PMID:33913806) (MGI:6867107|PMID:33767452) |
RGD |
PMID:33767452 PMID:33913806 |
MGI:6867107 |
NCBI chr 8:106,814,569...106,834,535
Ensembl chr 8:106,814,569...106,834,438
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G |
Zc3h4 |
zinc finger CCCH-type containing 4 |
involved_in |
ISO |
(PMID:33913806) (MGI:6867107|PMID:33767452) |
RGD |
PMID:33767452 PMID:33913806 |
MGI:6867107 |
NCBI chr 1:77,106,309...77,143,827
Ensembl chr 1:77,106,250...77,142,691
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G |
Polr2i |
RNA polymerase II subunit I |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:85,483,515...85,484,952
Ensembl chr 1:85,483,515...85,484,952
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|
|
G |
C1d |
C1D nuclear receptor corepressor |
involved_in |
IBA ISO |
PMID:21873635 (PMID:17412707) |
RGD |
PMID:17412707 PMID:21873635 |
RGD:13792537 |
NCBI chr14:91,660,951...91,673,177
Ensembl chr14:91,660,989...91,672,852
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|
G |
Eif6 |
eukaryotic translation initiation factor 6 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
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G |
Exosc10 |
exosome component 10 |
involved_in |
ISO |
(PMID:17412707), (PMID:20368444) |
RGD |
PMID:17412707 PMID:20368444 |
|
NCBI chr 5:158,995,318...159,018,946
Ensembl chr 5:158,995,313...159,018,940
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G |
Exosc4 |
exosome component 4 |
involved_in |
ISO |
(PMID:20368444) |
RGD |
PMID:20368444 |
|
NCBI chr 7:108,047,831...108,050,573
Ensembl chr 7:108,047,831...108,050,573
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G |
Las1l |
LAS1-like, ribosome biogenesis factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:60,851,969...60,873,717
Ensembl chr X:60,851,962...60,873,687
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G |
Mak16 |
MAK16 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:60,972,699...60,981,250
Ensembl chr16:60,972,697...60,983,243
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|
G |
Mphosph6 |
M phase phosphoprotein 6 |
involved_in |
ISO IBA |
(PMID:17412707) PMID:21873635 |
RGD |
PMID:17412707 PMID:21873635 |
RGD:13792537 |
NCBI chr19:45,860,152...45,870,077
Ensembl chr19:45,860,154...45,870,170
|
|
G |
Mtrex |
Mtr4 exosome RNA helicase |
involved_in |
ISO IBA |
(PMID:17412707) PMID:21873635 |
RGD |
PMID:17412707 PMID:21873635 |
RGD:13792537 |
NCBI chr 2:44,500,326...44,560,624
Ensembl chr 2:44,461,444...44,560,627
|
|
G |
Nol9 |
nucleolar protein 9 |
involved_in |
ISO |
(PMID:21063389) |
RGD |
PMID:21063389 |
|
NCBI chr 5:162,546,522...162,566,625
Ensembl chr 5:162,546,541...162,566,191
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|
G |
Nsa2 |
NSA2 ribosome biogenesis factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:28,443,142...28,449,393
Ensembl chr 2:28,441,269...28,449,388
|
|
G |
Prkdc |
protein kinase, DNA-activated, catalytic subunit |
involved_in |
ISO |
(PMID:32103174) |
RGD |
PMID:32103174 |
|
NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
|
|
G |
Rpf1 |
ribosome production factor 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:235,403,020...235,417,546
Ensembl chr 2:235,403,021...235,417,807
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|
G |
Rrp15 |
ribosomal RNA processing 15 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr13:98,276,276...98,299,357
Ensembl chr13:98,276,134...98,299,370
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|
|
G |
Bop1 |
BOP1 ribosomal biogenesis factor |
involved_in |
IEA |
GO_REF:0000104 |
UniProt |
|
GO_REF:0000104 |
NCBI chr 7:108,172,062...108,195,875
Ensembl chr 7:108,172,066...108,195,931
|
|
G |
Ftsj3 |
FtsJ RNA 2'-O-methyltransferase 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:91,180,945...91,187,389
Ensembl chr10:91,180,696...91,187,397
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|
G |
Pes1 |
pescadillo ribosomal biogenesis factor 1 |
involved_in |
ISO IEA ISS |
(PMID:16738141) GO_REF:0000104 GO_REF:0000024 |
RGD UniProt |
PMID:16738141 |
GO_REF:0000024 GO_REF:0000104 |
NCBI chr14:78,850,754...78,867,134
Ensembl chr14:78,850,709...78,867,134
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G |
Urb1 |
URB1 ribosome biogenesis homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr11:30,004,539...30,065,315
Ensembl chr11:30,004,539...30,065,363
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G |
Wdr12 |
WD repeat domain 12 |
involved_in |
ISO IEA IBA ISS |
(PMID:16043514) GO_REF:0000104 PMID:21873635 GO_REF:0000024 |
RGD UniProt |
PMID:16043514 PMID:21873635 |
GO_REF:0000024 GO_REF:0000104, RGD:13792537 |
NCBI chr 9:61,475,498...61,502,584
Ensembl chr 9:61,475,517...61,502,469
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Sart1 |
spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:202,690,472...202,699,136
Ensembl chr 1:202,690,459...202,699,136
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AABR07007121.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 1:259,826,698...259,827,548
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G |
AABR07027819.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr17:43,254,214...43,255,377
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G |
AABR07029262.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr10:18,291,363...18,292,163
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G |
AABR07030630.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr10:93,364,092...93,364,568
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G |
AABR07045321.1 |
|
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr20:40,814,078...40,814,928
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G |
AABR07049918.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 5:139,195,914...139,196,714
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G |
AABR07052519.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 3:57,334,747...57,335,597
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G |
AC128901.1 |
|
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 4:148,270,351...148,271,151
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G |
Eif6 |
eukaryotic translation initiation factor 6 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
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G |
ENSRNOG00000067069 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 7:71,346,292...71,347,142
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Las1l |
LAS1-like, ribosome biogenesis factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:60,851,969...60,873,717
Ensembl chr X:60,851,962...60,873,687
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G |
LOC100359574 |
NHP2 non-histone chromosome protein 2-like 1-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:259,716,062...259,716,923
Ensembl chr 1:259,715,711...259,716,758
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G |
LOC103690888 |
60S ribosomal protein L10a-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:104,902,239...104,902,979
Ensembl chr X:104,902,239...104,902,892
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G |
LOC108349606 |
60S ribosomal protein L7a-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr18:4,172,029...4,172,931
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G |
LOC120097172 |
60S ribosomal protein L7a-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr15:42,188,307...42,189,095
Ensembl chr15:42,188,259...42,189,095
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G |
LOC680700 |
similar to ribosomal protein L10a |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:134,578,540...134,579,373
Ensembl chr 5:134,578,565...134,579,341
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G |
Mak16 |
MAK16 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:60,972,699...60,981,250
Ensembl chr16:60,972,697...60,983,243
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G |
Nhp2 |
NHP2 ribonucleoprotein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:35,877,015...35,880,409
Ensembl chr10:35,877,054...35,882,545
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G |
Nop2 |
NOP2 nucleolar protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:157,932,731...157,944,462
Ensembl chr 4:157,932,716...157,944,459
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G |
Nsa2 |
NSA2 ribosome biogenesis factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:28,443,142...28,449,393
Ensembl chr 2:28,441,269...28,449,388
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G |
RGD1560842 |
similar to Brix domain containing 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 6:134,287,529...134,288,901
Ensembl chr 6:134,287,818...134,288,702
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G |
RGD1566078 |
similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) (Sperm specific antigen 1) |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:150,624,087...150,624,525
Ensembl chr X:150,624,087...150,624,473
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G |
Rpf1 |
ribosome production factor 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:235,403,020...235,417,546
Ensembl chr 2:235,403,021...235,417,807
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G |
Rpl10a |
ribosomal protein L10A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:6,388,800...6,391,358
Ensembl chr20:6,385,823...6,391,357
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G |
Rpl7a |
ribosomal protein L7A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:10,239,026...10,241,703
Ensembl chr 3:10,239,001...10,241,716
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G |
Rrp15 |
ribosomal RNA processing 15 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr13:98,276,276...98,299,357
Ensembl chr13:98,276,134...98,299,370
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G |
Rsl1d1 |
ribosomal L1 domain containing 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:4,424,868...4,436,753
Ensembl chr10:4,397,821...4,439,593
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G |
Snu13 |
small nuclear ribonucleoprotein 13 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:113,565,903...113,570,871
Ensembl chr 7:113,565,295...113,570,872
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G |
AABR07008724.1 |
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involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
Ensembl chr 2:70,904,506...70,905,278
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G |
Bop1 |
BOP1 ribosomal biogenesis factor |
involved_in |
ISO IEA IBA ISS |
(PMID:17353269) GO_REF:0000104 PMID:21873635 GO_REF:0000024 |
RGD UniProt |
PMID:17353269 PMID:21873635 |
GO_REF:0000024 GO_REF:0000104, RGD:13792537 |
NCBI chr 7:108,172,062...108,195,875
Ensembl chr 7:108,172,066...108,195,931
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G |
ENSRNOG00000064315 |
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involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
Ensembl chr15:33,274,509...33,275,597
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G |
ENSRNOG00000067266 |
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involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
Ensembl chr 3:165,188,105...165,188,942
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G |
ENSRNOG00000070052 |
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involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
Ensembl chr 8:73,132,657...73,133,891
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G |
Ftsj3 |
FtsJ RNA 2'-O-methyltransferase 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:91,180,945...91,187,389
Ensembl chr10:91,180,696...91,187,397
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G |
Gtpbp4 |
GTP binding protein 4 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:5617283|PMID:25190460) GO_REF:0000107 |
RGD Ensembl |
PMID:25190460 |
GO_REF:0000107 MGI:5617283 |
NCBI chr17:61,308,033...61,328,184
Ensembl chr17:61,308,014...61,418,009
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G |
LOC103694242 |
60S ribosomal protein L7 pseudogene |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:32,995,281...32,996,164
Ensembl chr16:32,995,363...32,996,204
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G |
LOC120093238 |
60S ribosomal protein L35-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 6:40,423,594...40,425,165
Ensembl chr 6:40,423,832...40,424,203
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G |
LOC367050 |
similar to 60S ribosomal protein L35 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 8:30,634,173...30,634,690
Ensembl chr 8:30,634,325...30,634,690
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G |
LOC686074 |
similar to 60S ribosomal protein L35 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr18:23,159,401...23,159,843
Ensembl chr18:23,159,441...23,159,812
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G |
Nifk |
nucleolar protein interacting with the FHA domain of MKI67 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr13:29,393,303...29,403,387
Ensembl chr13:29,393,286...29,405,896
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G |
Pes1 |
pescadillo ribosomal biogenesis factor 1 |
involved_in acts_upstream_of_or_within |
IBA IEA ISO ISS |
PMID:21873635 GO_REF:0000104 (MGI:5617283|PMID:25190460) (PMID:16738141), (PMID:17353269) GO_REF:0000024 |
UniProt RGD |
PMID:16738141 PMID:17353269 PMID:25190460 PMID:21873635 |
GO_REF:0000024 GO_REF:0000104 MGI:5617283, RGD:13792537 |
NCBI chr14:78,850,754...78,867,134
Ensembl chr14:78,850,709...78,867,134
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G |
Pigw |
phosphatidylinositol glycan anchor biosynthesis, class W |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:69,746,996...69,782,656
Ensembl chr10:69,748,789...69,790,475
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G |
Rbm34 |
RNA binding motif protein 34 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr19:54,936,516...54,956,810
Ensembl chr19:54,936,531...54,956,715
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G |
Rpf2 |
ribosome production factor 2 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:43,630,003...43,651,477
Ensembl chr20:43,629,951...43,651,509
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G |
Rpl35 |
ribosomal protein L35 |
involved_in |
IBA IEA |
PMID:21873635 GO_REF:0000002 |
InterPro |
PMID:21873635 |
GO_REF:0000002, RGD:13792537 |
NCBI chr 3:22,753,255...22,756,217
Ensembl chr 3:22,753,253...22,756,243
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G |
Rpl35-ps8 |
ribosomal protein L35, pseudogene 8 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:18,099,852...18,100,291
Ensembl chr X:18,099,866...18,100,291
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G |
Rpl7 |
ribosomal protein L7 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:3,217,184...3,220,192
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G |
Rpl7l1 |
ribosomal protein L7-like 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 9:14,198,101...14,206,119
Ensembl chr 9:14,198,092...14,206,110
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G |
Urb1 |
URB1 ribosome biogenesis homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr11:30,004,539...30,065,315
Ensembl chr11:30,004,539...30,065,363
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G |
Wdr12 |
WD repeat domain 12 |
involved_in |
ISS IEA IBA ISO |
GO_REF:0000024 GO_REF:0000104 PMID:21873635 (PMID:16043514), (PMID:17353269) |
UniProt RGD |
PMID:16043514 PMID:17353269 PMID:21873635 |
GO_REF:0000024 GO_REF:0000104, RGD:13792537 |
NCBI chr 9:61,475,498...61,502,584
Ensembl chr 9:61,475,517...61,502,469
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G |
Znhit3 |
zinc finger, HIT-type containing 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:69,775,885...69,790,471
Ensembl chr10:69,748,789...69,790,475
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G |
Znhit6 |
zinc finger, HIT-type containing 6 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:234,486,686...234,517,952
Ensembl chr 2:234,486,704...234,517,960
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G |
Ddx52 |
DExD-box helicase 52 |
involved_in |
IBA IEA |
PMID:21873635 GO_REF:0000002 |
InterPro |
PMID:21873635 |
GO_REF:0000002, RGD:13792537 |
NCBI chr10:68,824,594...68,847,400
Ensembl chr10:68,824,645...68,848,266
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G |
LOC100359574 |
NHP2 non-histone chromosome protein 2-like 1-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:259,716,062...259,716,923
Ensembl chr 1:259,715,711...259,716,758
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G |
LOC100360750 |
Sm protein F-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr13:42,114,013...42,116,559
Ensembl chr13:42,114,032...42,116,484
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G |
LOC108353424 |
40S ribosomal protein S28 pseudogene |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:12,825,455...12,825,905
Ensembl chr20:12,825,606...12,825,815
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G |
Lsm6 |
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr19:29,098,254...29,112,858
Ensembl chr13:42,114,032...42,116,484 Ensembl chr19:42,114,032...42,116,484
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G |
Nob1 |
NIN1 (RPN12) binding protein 1 homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr19:35,322,803...35,335,354
Ensembl chr19:35,322,669...35,346,815
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G |
Nol11 |
nucleolar protein 11 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:22916032) |
RGD |
PMID:22916032 PMID:21873635 |
RGD:13792537 |
NCBI chr10:92,119,000...92,141,688
Ensembl chr10:92,121,833...92,141,677
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G |
Nop14 |
NOP14 nucleolar protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr14:76,081,318...76,102,454
Ensembl chr14:76,080,793...76,102,453
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G |
RGD1566078 |
similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) (Sperm specific antigen 1) |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:150,624,087...150,624,525
Ensembl chr X:150,624,087...150,624,473
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G |
Riok1 |
RIO kinase 1 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:22072790) |
RGD |
PMID:22072790 PMID:21873635 |
RGD:13792537 |
NCBI chr17:26,767,440...26,789,900
Ensembl chr17:26,766,947...26,789,900
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G |
Riok2 |
RIO kinase 2 |
involved_in |
ISO IBA |
(PMID:19564402) PMID:21873635 |
RGD |
PMID:19564402 PMID:21873635 |
RGD:13792537 |
NCBI chr 1:58,103,132...58,119,397
Ensembl chr 1:58,103,084...58,120,512
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G |
Riok3 |
RIO kinase 3 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:22418843) |
RGD |
PMID:22418843 PMID:21873635 |
RGD:13792537 |
NCBI chr18:3,327,776...3,353,350
Ensembl chr18:3,327,776...3,353,343
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G |
Rps14 |
ribosomal protein S14 |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
|
GO_REF:0000024 |
NCBI chr18:54,227,854...54,232,638
Ensembl chr18:54,227,854...54,233,166
|
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G |
Rps19 |
ribosomal protein S19 |
involved_in |
ISO |
(PMID:16990592), (PMID:17053056) |
RGD |
PMID:16990592 PMID:17053056 |
|
NCBI chr 1:80,480,718...80,486,511
Ensembl chr 1:80,480,951...80,486,508
|
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G |
Rps28 |
ribosomal protein S28 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:14,607,801...14,609,170
Ensembl chr 7:14,607,801...14,609,170
|
|
G |
Rps28-ps3 |
ribosomal protein S28, pseudogene 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:65,888,391...65,888,702
Ensembl chr16:65,888,416...65,888,625
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G |
Snu13 |
small nuclear ribonucleoprotein 13 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:113,565,903...113,570,871
Ensembl chr 7:113,565,295...113,570,872
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G |
Srfbp1 |
serum response factor binding protein 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr18:45,920,389...45,945,385
Ensembl chr18:45,920,446...45,942,515
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G |
Tsr3 |
TSR3 ribosome maturation factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:14,257,150...14,259,712
Ensembl chr10:14,257,171...14,259,561
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G |
Utp4 |
UTP4 small subunit processome component |
involved_in |
ISO |
(PMID:22916032) |
RGD |
PMID:22916032 |
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NCBI chr19:34,790,962...34,820,558
Ensembl chr19:34,792,457...34,820,550
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G |
Wdr3 |
WD repeat domain 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:187,505,816...187,528,432
Ensembl chr 2:187,505,816...187,528,432
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G |
Bms1 |
BMS1 ribosome biogenesis factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:151,558,163...151,595,187
Ensembl chr 4:151,558,163...151,595,127
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G |
Bysl |
bystin-like |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:3700849|PMID:17242206) |
Ensembl RGD |
PMID:17242206 |
GO_REF:0000107 MGI:3700849 |
NCBI chr 9:13,382,806...13,392,557
Ensembl chr 9:13,382,557...13,394,339
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G |
Dcaf13 |
DDB1 and CUL4 associated factor 13 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:70,160,983...70,196,142
Ensembl chr 7:70,160,941...70,196,142
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G |
Dhx37 |
DEAH-box helicase 37 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr12:31,194,782...31,214,890
Ensembl chr12:31,194,859...31,216,802
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G |
Ercc2 |
ERCC excision repair 2, TFIIH core complex helicase subunit |
acts_upstream_of_or_within |
ISO |
MGI:2183949 (MGI:5496981|PMID:23562818) |
RGD |
PMID:23562818 |
MGI:5496981 |
NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102
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G |
Gtf2h5 |
general transcription factor IIH subunit 5 |
acts_upstream_of_or_within |
ISO |
MGI:5514340 (MGI:5496981|PMID:23562818) |
RGD |
PMID:23562818 |
MGI:5496981 |
NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939
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G |
Heatr1 |
HEAT repeat containing 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr17:58,051,700...58,093,895
Ensembl chr17:58,051,700...58,093,948
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G |
LOC100363452 |
ribosomal protein S8-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:98,586,109...98,586,784
Ensembl chr 3:98,586,108...98,586,808
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G |
LOC102548369 |
40S ribosomal protein S16-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr15:92,259,763...92,260,218
Ensembl chr15:92,259,763...92,260,203
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G |
LOC297756 |
ribosomal protein S8-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:3,392,846...3,393,523
Ensembl chr 5:3,389,210...3,393,500
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G |
Ngdn |
neuroguidin |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr15:28,489,950...28,497,286
Ensembl chr15:28,490,040...28,519,654
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G |
Nol10 |
nucleolar protein 10 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 6:40,144,217...40,225,353
Ensembl chr 6:40,144,235...40,225,353
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G |
Pwp2 |
PWP2, small subunit processome component |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:10,499,332...10,512,965
Ensembl chr20:10,499,363...10,513,640
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G |
RGD1561137 |
similar to 40S ribosomal protein S16 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:21,494,155...21,494,684
Ensembl chr 3:21,494,203...21,494,676
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G |
RGD1566369 |
similar to ribosomal protein S8 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr17:83,759,360...83,760,027
Ensembl chr17:83,759,369...83,760,019
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G |
Rps16 |
ribosomal protein S16 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:83,643,066...83,646,056
Ensembl chr 1:83,643,130...83,646,206
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G |
Rps19 |
ribosomal protein S19 |
involved_in |
ISO |
(PMID:16990592), (PMID:17053056) |
RGD |
PMID:16990592 PMID:17053056 |
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NCBI chr 1:80,480,718...80,486,511
Ensembl chr 1:80,480,951...80,486,508
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G |
Rps8 |
ribosomal protein S8 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:130,630,362...130,632,932
Ensembl chr 5:130,629,716...130,633,268
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G |
Rrp36 |
ribosomal RNA processing 36 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 9:14,308,810...14,316,959
Ensembl chr 9:14,308,982...14,316,110
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G |
Slx9 |
SLX9 ribosome biogenesis factor |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr20:11,114,632...11,147,532
Ensembl chr20:11,114,589...11,147,521
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G |
Tsr1 |
TSR1, ribosome maturation factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:59,760,420...59,771,868
Ensembl chr10:59,760,409...59,771,864
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G |
Tsr2 |
TSR2, ribosome maturation factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:20,064,102...20,072,673
Ensembl chr X:20,064,103...20,072,620
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G |
Utp25 |
UTP25 small subunit processome component |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr13:104,630,390...104,651,681
Ensembl chr13:104,630,391...104,651,662
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G |
Utp3 |
UTP3, small subunit processome component |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr14:19,515,716...19,517,370
Ensembl chr14:19,515,669...19,517,396
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G |
Utp4 |
UTP4 small subunit processome component |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr19:34,790,962...34,820,558
Ensembl chr19:34,792,457...34,820,550
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G |
Utp6 |
UTP6 small subunit processome component |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:64,897,321...64,928,105
Ensembl chr10:64,897,328...64,927,997
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G |
Wdr43 |
WD repeat domain 43 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 6:23,845,499...23,884,846
Ensembl chr 6:23,845,499...23,884,846
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G |
Wdr46 |
WD repeat domain 46 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,937,845...4,945,796
Ensembl chr20:4,937,847...4,946,535
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G |
Dcp1a |
decapping mRNA 1A |
involved_in |
ISO |
(PMID:12417715) |
RGD |
PMID:12417715 |
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NCBI chr16:5,656,788...5,702,151
Ensembl chr16:5,656,773...5,702,140
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|
G |
Dcps |
decapping enzyme, scavenger |
involved_in |
ISO |
(PMID:26049109) |
RGD |
PMID:26049109 |
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NCBI chr 8:33,468,669...33,524,407
Ensembl chr 8:33,415,671...33,524,389
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G |
Nudt12 |
nudix hydrolase 12 |
involved_in |
ISO |
(PMID:31875550) |
RGD |
PMID:31875550 |
|
NCBI chr 9:98,741,627...98,755,039
Ensembl chr 9:98,742,360...98,755,039
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|
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G |
Dis3l2 |
DIS3-like 3'-5' exoribonuclease 2 |
involved_in |
IBA ISO |
PMID:21873635 (MGI:5494337|PMID:23594738), (MGI:5603455|PMID:25119025) (PMID:24141620) |
RGD |
PMID:23594738 PMID:24141620 PMID:25119025 PMID:21873635 |
MGI:5494337 MGI:5603455, RGD:13792537 |
NCBI chr 9:87,355,409...87,736,616
Ensembl chr 9:87,356,457...87,736,616
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G |
Lin28a |
lin-28 homolog A |
involved_in |
ISO |
(PMID:18951094), (PMID:19703396) (MGI:4359358|PMID:18604195), (MGI:4359360|PMID:18292307), (MGI:5294254|PMID:21962509) |
RGD |
PMID:18292307 PMID:18604195 PMID:18951094 PMID:19703396 PMID:21962509 |
MGI:4359358 MGI:4359360 MGI:5294254 |
NCBI chr 5:146,227,119...146,244,122
Ensembl chr 5:146,227,119...146,244,122
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G |
Lin28b |
lin-28 homolog B |
involved_in |
ISO |
(PMID:19703396) |
RGD |
PMID:19703396 |
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NCBI chr20:48,865,329...48,964,769
Ensembl chr20:48,869,485...48,955,077
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|
G |
Parn |
poly(A)-specific ribonuclease |
involved_in |
ISO |
(PMID:25049417) |
RGD |
PMID:25049417 |
|
NCBI chr10:1,410,636...1,548,573
Ensembl chr10:1,410,642...1,548,560
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G |
Snd1 |
staphylococcal nuclease and tudor domain containing 1 |
involved_in |
ISO IEA |
(PMID:28546213) GO_REF:0000107 |
RGD Ensembl |
PMID:28546213 |
GO_REF:0000107 |
NCBI chr 4:57,095,205...57,494,501
Ensembl chr 4:57,095,208...57,530,843
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G |
Tent4b |
terminal nucleotidyltransferase 4B |
involved_in |
ISO |
(PMID:25049417) |
RGD |
PMID:25049417 |
|
NCBI chr19:18,807,616...18,868,969
Ensembl chr19:18,807,525...18,869,537
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G |
Tut4 |
terminal uridylyl transferase 4 |
involved_in |
ISO |
(PMID:19703396) |
RGD |
PMID:19703396 |
|
NCBI chr 5:123,201,723...123,306,582
Ensembl chr 5:123,203,003...123,306,465
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|
G |
Zc3h12a |
zinc finger CCCH type containing 12A |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:22055188) |
UniProt RGD |
PMID:22055188 |
GO_REF:0000024 |
NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
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G |
Adar |
adenosine deaminase, RNA-specific |
acts_upstream_of_or_within |
ISO |
MGI:3032487 (MGI:5495061|PMID:23622242) |
RGD |
PMID:23622242 |
MGI:5495061 |
NCBI chr 2:175,138,391...175,178,280
Ensembl chr 2:175,138,403...175,178,282
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G |
Ago1 |
argonaute RISC component 1 |
involved_in |
ISO |
(PMID:22795694) |
RGD |
PMID:22795694 |
|
NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
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G |
Ago2 |
argonaute RISC catalytic component 2 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:19966796), (PMID:23661684) MGI:3056454 (MGI:4462112|PMID:20424607) |
RGD |
PMID:19966796 PMID:20424607 PMID:23661684 |
MGI:4462112 |
NCBI chr 7:105,018,202...105,105,120
Ensembl chr 7:105,029,120...105,104,974
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G |
Ago3 |
argonaute RISC catalytic component 3 |
involved_in |
ISO |
(PMID:22795694) |
RGD |
PMID:22795694 |
|
NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
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G |
Ago4 |
argonaute RISC component 4 |
involved_in |
ISO |
(PMID:22795694) |
RGD |
PMID:22795694 |
|
NCBI chr 5:138,780,450...138,825,889
Ensembl chr 5:138,783,069...138,825,632
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|
G |
Dicer1 |
dicer 1 ribonuclease III |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:15973356), (PMID:23322395), (PMID:23661684), (PMID:26435691) MGI:1926500|MGI:3589209|MGI:3589287|MGI:3622169 (MGI:3528782|PMID:15713842), (MGI:3588609|PMID:16040801), (MGI:3619610|PMID:16462742) (MGI:4454581|PMID:20463238), (MGI:4830414|PMID:20805985), (MGI:5527004|PMID:24209619) |
RGD |
PMID:15713842 PMID:15973356 PMID:16040801 PMID:16462742 PMID:20463238 PMID:20805985 PMID:23322395 PMID:23661684 PMID:24209619 PMID:26435691 More...
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MGI:3528782 MGI:3588609 MGI:3619610 MGI:4454581 MGI:4830414 MGI:5527004 |
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
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|
G |
H19 |
H19 imprinted maternally expressed transcript |
involved_in |
ISO |
(PMID:31574452) |
RGD |
PMID:31574452 |
|
NCBI chr 1:197,730,698...197,733,374
Ensembl chr 1:197,730,698...197,733,134
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|
G |
Nup155 |
nucleoporin 155 |
acts_upstream_of_or_within_positive_effect |
ISO |
(MGI:6389306|PMID:31481660) |
RGD |
PMID:31481660 |
MGI:6389306 |
NCBI chr 2:57,201,310...57,252,918
Ensembl chr 2:57,201,272...57,254,148
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|
G |
Prkra |
protein activator of interferon induced protein kinase EIF2AK2 |
involved_in |
ISO |
(PMID:23661684) |
RGD |
PMID:23661684 |
|
NCBI chr 3:61,575,447...61,594,393
Ensembl chr 3:61,575,447...61,594,347
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G |
Pum1 |
pumilio RNA-binding family member 1 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:28431233) |
RGD |
PMID:28431233 PMID:21873635 |
RGD:13792537 |
NCBI chr 5:142,836,933...142,954,331
Ensembl chr 5:142,837,127...142,954,039
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|
G |
Pum2 |
pumilio RNA-binding family member 2 |
involved_in |
ISO IBA |
(PMID:28431233) PMID:21873635 |
RGD |
PMID:28431233 PMID:21873635 |
RGD:13792537 |
NCBI chr 6:31,462,879...31,542,976
Ensembl chr 6:31,462,872...31,542,976
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|
G |
Rbm3 |
RNA binding motif protein 3 |
acts_upstream_of_or_within |
ISO |
(MGI:3530692|PMID:15684048) |
RGD |
PMID:15684048 |
MGI:3530692 |
NCBI chr X:14,348,909...14,352,387
Ensembl chr X:14,348,910...14,353,580
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|
G |
Snip1 |
Smad nuclear interacting protein 1 |
involved_in |
ISO IBA ISS |
(PMID:18632581) PMID:21873635 GO_REF:0000024 |
RGD UniProt |
PMID:18632581 PMID:21873635 |
GO_REF:0000024, RGD:13792537 |
NCBI chr 5:137,328,371...137,335,846
Ensembl chr 5:137,328,371...137,335,845
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|
G |
Spout1 |
SPOUT domain containing methyltransferase 1 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:28431233) |
RGD |
PMID:28431233 PMID:21873635 |
RGD:13792537 |
NCBI chr 3:13,451,191...13,458,919
Ensembl chr 3:13,451,202...13,493,355
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|
G |
Tarbp2 |
Tarbp2 subunit of RISC loading complex |
involved_in |
ISO |
(PMID:15973356), (PMID:23661684) |
RGD |
PMID:15973356 PMID:23661684 |
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NCBI chr 7:133,649,118...133,654,306
Ensembl chr 7:133,649,090...133,654,314
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|
G |
Trim71 |
tripartite motif containing 71 |
involved_in |
ISO ISS |
(PMID:28431233) GO_REF:0000024 |
RGD UniProt |
PMID:28431233 |
GO_REF:0000024 |
NCBI chr 8:114,193,439...114,250,807
Ensembl chr 8:114,199,187...114,250,807
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|
G |
Zc3h7a |
zinc finger CCCH type containing 7 A |
involved_in |
ISO IBA |
(PMID:28431233) PMID:21873635 |
RGD |
PMID:28431233 PMID:21873635 |
RGD:13792537 |
NCBI chr10:4,473,177...4,512,669
Ensembl chr10:4,473,203...4,512,665
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|
G |
Zc3h7b |
zinc finger CCCH-type containing 7B |
involved_in |
ISO IBA |
(PMID:28431233) PMID:21873635 |
RGD |
PMID:28431233 PMID:21873635 |
RGD:13792537 |
NCBI chr 7:113,262,142...113,310,399
Ensembl chr 7:113,262,165...113,310,399
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G |
Ago1 |
argonaute RISC component 1 |
NOT|involved_in |
ISO |
(PMID:15260970) |
RGD |
PMID:15260970 |
|
NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
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|
G |
Ago2 |
argonaute RISC catalytic component 2 |
involved_in |
ISO ISS IEA |
(PMID:15260970), (PMID:17524464), (PMID:18771919) (MGI:5616320|PMID:16357216) GO_REF:0000024 GO_REF:0000104 |
RGD UniProt |
PMID:15260970 PMID:16357216 PMID:17524464 PMID:18771919 |
GO_REF:0000024 GO_REF:0000104 MGI:5616320 |
NCBI chr 7:105,018,202...105,105,120
Ensembl chr 7:105,029,120...105,104,974
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|
G |
Ago3 |
argonaute RISC catalytic component 3 |
NOT|involved_in |
ISO |
(PMID:15260970) |
RGD |
PMID:15260970 |
|
NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
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|
G |
Ago4 |
argonaute RISC component 4 |
NOT|involved_in |
ISO |
(PMID:15260970) |
RGD |
PMID:15260970 |
|
NCBI chr 5:138,780,450...138,825,889
Ensembl chr 5:138,783,069...138,825,632
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|
G |
Mir1 |
microRNA 1 |
involved_in |
ISO |
(PMID:23499676), (PMID:25802280) |
RGD |
PMID:23499676 PMID:25802280 |
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NCBI chr18:1,887,537...1,887,623
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|
G |
Mir100 |
microRNA 100 |
involved_in |
ISO |
(PMID:22684006) |
RGD |
PMID:22684006 |
|
NCBI chr 8:41,901,225...41,901,304
Ensembl chr 8:41,901,225...41,901,304
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G |
Mir106a |
microRNA 106a |
involved_in |
ISO |
(PMID:26265888) |
RGD |
PMID:26265888 |
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NCBI chr X:132,422,584...132,422,661
Ensembl chr X:132,422,584...132,422,661
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G |
Mir125b1 |
microRNA 125b-1 |
involved_in |
ISO |
(PMID:28214897) |
RGD |
PMID:28214897 |
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NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052
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G |
Mir125b2 |
microRNA 125b-2 |
involved_in |
ISO |
(PMID:28214897) |
RGD |
PMID:28214897 |
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NCBI chr11:16,245,620...16,245,707
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Mir128-1 |
microRNA 128-1 |
involved_in |
ISO |
(PMID:33058756) |
RGD |
PMID:33058756 |
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NCBI chr13:39,699,449...39,699,530
Ensembl chr13:39,699,449...39,699,530
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G |
Mir128-2 |
microRNA 128-2 |
involved_in |
ISO |
(PMID:33058756) |
RGD |
PMID:33058756 |
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NCBI chr 8:112,085,467...112,085,550
Ensembl chr 8:112,085,467...112,085,550
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G |
Mir130a |
microRNA 130a |
involved_in |
ISO |
(PMID:30741461) |
RGD |
PMID:30741461 |
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NCBI chr 3:69,822,542...69,822,629
Ensembl chr 3:69,822,542...69,822,629
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G |
Mir133a1 |
microRNA 133a-1 |
involved_in |
ISO |
(PMID:32205184) |
RGD |
PMID:32205184 |
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NCBI chr18:1,885,082...1,885,168
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Mir135b |
microRNA 135b |
involved_in |
ISO |
(PMID:27793001) |
RGD |
PMID:27793001 |
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NCBI chr13:43,638,857...43,638,953
Ensembl chr13:43,638,857...43,638,953
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Mir137 |
microRNA 137 |
involved_in |
ISO |
(PMID:23275153) |
RGD |
PMID:23275153 |
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NCBI chr 2:206,480,881...206,480,982
Ensembl chr 2:206,480,884...206,480,985
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G |
Mir140 |
microRNA 140 |
involved_in |
ISO |
(PMID:24928442) |
RGD |
PMID:24928442 |
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NCBI chr19:35,465,577...35,465,675
Ensembl chr19:35,465,577...35,465,675
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G |
Mir145 |
microRNA 145 |
involved_in |
ISO |
(PMID:29883722) |
RGD |
PMID:29883722 |
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NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727
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G |
Mir146a |
microRNA 146a |
involved_in |
ISO |
(PMID:30779466) |
RGD |
PMID:30779466 |
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NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610
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G |
Mir151 |
microRNA 151 |
involved_in |
ISO |
(PMID:20305651) |
RGD |
PMID:20305651 |
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NCBI chr 7:105,172,377...105,172,473
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G |
Mir185 |
microRNA 185 |
involved_in |
ISO |
(PMID:23459944), (PMID:23951060), (PMID:26316588), (PMID:29053187) |
RGD |
PMID:23459944 PMID:23951060 PMID:26316588 PMID:29053187 |
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NCBI chr11:82,664,716...82,664,795
Ensembl chr11:82,664,716...82,664,795
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G |
Mir18a |
microRNA 18a |
involved_in |
ISO |
(PMID:29988076) |
RGD |
PMID:29988076 |
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NCBI chr15:92,180,765...92,180,860
Ensembl chr15:92,180,765...92,180,860
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G |
Mir190b |
microRNA 190b |
involved_in |
ISO |
(PMID:32039833) |
RGD |
PMID:32039833 |
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NCBI chr 2:175,514,800...175,514,877
Ensembl chr 2:175,514,800...175,514,877
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G |
Mir191 |
microRNA 191 |
involved_in |
ISO |
(PMID:31874245) |
RGD |
PMID:31874245 |
|
NCBI chr 8:109,264,098...109,264,188
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Mir192 |
microRNA 192 |
involved_in |
ISO |
(PMID:28483554) |
RGD |
PMID:28483554 |
|
NCBI chr 1:203,564,946...203,565,055
Ensembl chr 1:203,564,946...203,565,055
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G |
Mir195 |
microRNA 195 |
involved_in |
ISO |
(PMID:31921616) |
RGD |
PMID:31921616 |
|
NCBI chr10:54,951,838...54,951,924
Ensembl chr10:54,951,838...54,951,924
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G |
Mir196a |
microRNA 196a |
acts_upstream_of_or_within |
ISO |
(MGI:3042528|PMID:15105502), (MGI:3510301|PMID:15361871) |
RGD |
PMID:15105502 PMID:15361871 |
MGI:3042528 MGI:3510301 |
NCBI chr 7:134,110,400...134,110,509
Ensembl chr 7:134,110,400...134,110,509
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G |
Mir196b |
microRNA 196b |
acts_upstream_of_or_within |
ISO |
(MGI:3042528|PMID:15105502) |
RGD |
PMID:15105502 |
MGI:3042528 |
NCBI chr 4:81,330,487...81,330,571
Ensembl chr 4:81,330,487...81,330,571
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G |
Mir196c |
microRNA 196c |
acts_upstream_of_or_within |
ISO |
(MGI:3042528|PMID:15105502), (MGI:3510301|PMID:15361871) |
RGD |
PMID:15105502 PMID:15361871 |
MGI:3042528 MGI:3510301 |
NCBI chr10:81,231,006...81,231,085
Ensembl chr10:81,231,006...81,231,085
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G |
Mir1b |
microRNA 1b |
involved_in |
ISO |
(PMID:23499676), (PMID:25802280) |
RGD |
PMID:23499676 PMID:25802280 |
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NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201
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G |
Mir206 |
microRNA 206 |
involved_in |
ISO |
(PMID:23499676) |
RGD |
PMID:23499676 |
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NCBI chr 9:23,094,249...23,094,332
Ensembl chr 9:23,094,249...23,094,332
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G |
Mir20a |
microRNA 20a |
involved_in |
ISO |
(PMID:31368162) |
RGD |
PMID:31368162 |
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NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168
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G |
Mir210 |
microRNA 210 |
involved_in |
ISO |
(PMID:29944867) |
RGD |
PMID:29944867 |
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NCBI chr 1:196,326,343...196,326,452
Ensembl chr 1:196,326,337...196,326,454
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G |
Mir212 |
microRNA 212 |
involved_in |
ISO |
(PMID:26693054) |
RGD |
PMID:26693054 |
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NCBI chr10:60,023,403...60,023,513
Ensembl chr10:60,023,403...60,023,513
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G |
Mir214 |
microRNA 214 |
involved_in |
ISO |
(PMID:30703347) |
RGD |
PMID:30703347 |
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NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481
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G |
Mir223 |
microRNA 223 |
involved_in |
ISO |
(PMID:23459944), (PMID:34637033) |
RGD |
PMID:23459944 PMID:34637033 |
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NCBI chr X:61,141,887...61,141,996
Ensembl chr X:61,141,887...61,141,996
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G |
Mir23a |
microRNA 23a |
involved_in |
ISO |
(PMID:26400397) |
RGD |
PMID:26400397 |
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NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
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G |
Mir24-2 |
microRNA 24-2 |
involved_in |
ISO |
(PMID:30378100) |
RGD |
PMID:30378100 |
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NCBI chr19:23,954,683...23,954,790
Ensembl chr19:23,954,683...23,954,790
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G |
Mir27a |
microRNA 27a |
involved_in |
ISO |
(PMID:25915942), (PMID:26400397) |
RGD |
PMID:25915942 PMID:26400397 |
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NCBI chr19:23,954,831...23,954,917
Ensembl chr19:23,954,831...23,954,917
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G |
Mir30b |
microRNA 30b |
involved_in |
ISO |
(PMID:23968872) |
RGD |
PMID:23968872 |
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NCBI chr 7:100,132,589...100,132,675
Ensembl chr 7:100,132,589...100,132,675
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G |
Mir326 |
microRNA 326 |
involved_in |
ISO |
(PMID:24279830) |
RGD |
PMID:24279830 |
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NCBI chr 1:153,854,029...153,854,123
Ensembl chr 1:153,854,029...153,854,123
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G |
Mir342 |
microRNA 342 |
involved_in |
ISO |
(PMID:23951060) |
RGD |
PMID:23951060 |
|
NCBI chr 6:127,565,269...127,565,367
Ensembl chr 6:127,565,269...127,565,367
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G |
Mir3582 |
microRNA 3582 |
involved_in |
ISO |
(PMID:32205184) |
RGD |
PMID:32205184 |
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NCBI chr18:1,885,063...1,885,180
Ensembl chr18:1,885,063...1,885,180
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G |
Mir423 |
microRNA 423 |
involved_in |
ISO |
(PMID:32264887) |
RGD |
PMID:32264887 |
|
NCBI chr10:61,914,142...61,914,220
Ensembl chr10:61,914,133...61,914,226
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G |
Mir486 |
microRNA 486 |
involved_in |
ISO |
(PMID:25857263) |
RGD |
PMID:25857263 |
|
|
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G |
Mir665 |
microRNA 665 |
involved_in |
ISO |
(PMID:34454184) |
RGD |
PMID:34454184 |
|
NCBI chr 6:128,539,440...128,539,533
Ensembl chr 6:128,539,440...128,539,533
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G |
Mir9-3 |
microRNA 9-3 |
involved_in |
ISO |
(PMID:29584810) |
RGD |
PMID:29584810 |
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NCBI chr 1:133,440,049...133,440,138
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G |
Mir93 |
microRNA 93 |
involved_in |
ISO |
(PMID:28797104) |
RGD |
PMID:28797104 |
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NCBI chr12:17,043,135...17,043,221
Ensembl chr12:17,043,135...17,043,221
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G |
Mir96 |
microRNA 96 |
involved_in |
ISO |
(PMID:23459944) |
RGD |
PMID:23459944 |
|
NCBI chr 4:58,788,411...58,788,516
Ensembl chr 4:58,788,411...58,788,516
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G |
Mir98 |
microRNA 98 |
involved_in |
ISO |
(PMID:27860183), (PMID:28251559), (PMID:30195495) |
RGD |
PMID:27860183 PMID:28251559 PMID:30195495 |
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NCBI chr X:20,981,235...20,981,342
Ensembl chr X:20,981,235...20,981,342
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G |
Mirlet7a1 |
microRNA let-7a-1 |
involved_in |
ISO |
(PMID:17671087) |
RGD |
PMID:17671087 |
|
NCBI chr17:16,113,766...16,113,859
Ensembl chr17:16,113,768...16,113,867
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G |
Mirlet7b |
microRNA let-7b |
involved_in |
ISO |
(PMID:29471394) |
RGD |
PMID:29471394 |
|
NCBI chr 7:116,804,186...116,804,270
Ensembl chr 7:116,804,186...116,804,270
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G |
Mirlet7c2 |
microRNA let7c-2 |
involved_in |
ISO |
(PMID:17671087) |
RGD |
PMID:17671087 |
|
NCBI chr 7:116,803,771...116,803,865
Ensembl chr 7:116,803,771...116,803,865
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G |
Mov10 |
Mov10 RISC complex RNA helicase |
involved_in |
ISO |
(PMID:16289642) |
RGD |
PMID:16289642 |
|
NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083
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G |
Pde12 |
phosphodiesterase 12 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:21245038), (PMID:21666256) |
Ensembl RGD |
PMID:21245038 PMID:21666256 |
GO_REF:0000107 |
NCBI chr16:1,915,386...1,925,427
Ensembl chr16:1,915,386...1,925,887
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G |
Pnpt1 |
polyribonucleotide nucleotidyltransferase 1 |
involved_in |
ISO IBA |
(PMID:20691904) PMID:21873635 (MGI:4881376|PMID:20691904) |
RGD |
PMID:20691904 PMID:21873635 |
MGI:4881376, RGD:13792537 |
NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696
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G |
Supv3l1 |
Suv3 like RNA helicase |
involved_in |
IEA ISS ISO |
GO_REF:0000107 GO_REF:0000024 (PMID:19864255) |
Ensembl UniProt RGD |
PMID:19864255 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr20:30,378,542...30,399,076
Ensembl chr20:30,378,550...30,399,054
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G |
Pnpt1 |
polyribonucleotide nucleotidyltransferase 1 |
involved_in |
ISO |
(PMID:18083837) |
RGD |
PMID:18083837 |
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NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696
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G |
Tbrg4 |
transforming growth factor beta regulator 4 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:28335001) |
UniProt RGD |
PMID:28335001 |
GO_REF:0000024 |
NCBI chr14:81,481,977...81,490,781
Ensembl chr14:81,481,981...81,490,756
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G |
Supv3l1 |
Suv3 like RNA helicase |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:19864255) |
UniProt Ensembl RGD |
PMID:19864255 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr20:30,378,542...30,399,076
Ensembl chr20:30,378,550...30,399,054
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G |
Supv3l1 |
Suv3 like RNA helicase |
involved_in |
ISO IEA ISS |
(PMID:19864255) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:19864255 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr20:30,378,542...30,399,076
Ensembl chr20:30,378,550...30,399,054
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G |
Pnpt1 |
polyribonucleotide nucleotidyltransferase 1 |
involved_in |
ISO IBA |
(PMID:18083837) PMID:21873635 |
RGD |
PMID:18083837 PMID:21873635 |
RGD:13792537 |
NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696
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G |
Supv3l1 |
Suv3 like RNA helicase |
involved_in |
ISS IEA IBA ISO |
GO_REF:0000024 GO_REF:0000107 PMID:21873635 (PMID:19864255) |
UniProt Ensembl RGD |
PMID:19864255 PMID:21873635 |
GO_REF:0000024 GO_REF:0000107, RGD:13792537 |
NCBI chr20:30,378,542...30,399,076
Ensembl chr20:30,378,550...30,399,054
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G |
Pnpt1 |
polyribonucleotide nucleotidyltransferase 1 |
involved_in |
ISO |
(PMID:18083837) |
RGD |
PMID:18083837 |
|
NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696
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G |
Trmt10c |
tRNA methyltransferase 10C, mitochondrial RNase P subunit |
involved_in |
ISO ISS |
(PMID:21593607) GO_REF:0000024 |
RGD UniProt |
PMID:21593607 |
GO_REF:0000024 |
NCBI chr11:44,584,388...44,589,466
Ensembl chr11:44,584,113...44,589,568
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Lrpprc |
leucine-rich pentatricopeptide repeat containing |
acts_upstream_of involved_in |
ISO IEA |
MGI:3857306|MGI:5438913 (MGI:5301479|PMID:21880015), (MGI:5438202|PMID:22045337) GO_REF:0000107 |
RGD Ensembl |
PMID:21880015 PMID:22045337 |
GO_REF:0000107 MGI:5301479 MGI:5438202 |
NCBI chr 6:9,859,867...9,942,294
Ensembl chr 6:9,859,867...9,942,293
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G |
Pnpt1 |
polyribonucleotide nucleotidyltransferase 1 |
involved_in |
ISO |
(PMID:18501193) |
RGD |
PMID:18501193 |
|
NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696
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Fastkd1 |
FAST kinase domains 1 |
involved_in |
ISO |
(PMID:28335001) |
RGD |
PMID:28335001 |
|
NCBI chr 3:54,449,710...54,475,624
Ensembl chr 3:54,449,711...54,475,540
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G |
Fastk |
Fas-activated serine/threonine kinase |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:10,732,273...10,736,332
Ensembl chr 4:10,732,256...10,737,430
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G |
Fastkd1 |
FAST kinase domains 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:54,449,710...54,475,624
Ensembl chr 3:54,449,711...54,475,540
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G |
Fastkd2 |
FAST kinase domains 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 9:65,166,148...65,188,184
Ensembl chr 9:65,168,228...65,188,174
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G |
Fastkd3 |
FAST kinase domains 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:34,858,342...34,866,988
Ensembl chr 1:34,858,219...34,866,973
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G |
Fastkd5 |
FAST kinase domains 5 |
involved_in |
ISO |
(PMID:25683715) |
RGD |
PMID:25683715 |
|
NCBI chr 3:117,830,227...117,847,737
Ensembl chr 3:117,830,083...117,847,820
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G |
Tbrg4 |
transforming growth factor beta regulator 4 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr14:81,481,977...81,490,781
Ensembl chr14:81,481,981...81,490,756
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G |
Supv3l1 |
Suv3 like RNA helicase |
involved_in |
ISO ISS |
(PMID:19864255) GO_REF:0000024 |
RGD UniProt |
PMID:19864255 |
GO_REF:0000024 |
NCBI chr20:30,378,542...30,399,076
Ensembl chr20:30,378,550...30,399,054
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G |
Elac2 |
elaC ribonuclease Z 2 |
involved_in |
IBA ISO IEA ISS |
PMID:21873635 (PMID:21593607) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:21593607 PMID:21873635 |
GO_REF:0000024 GO_REF:0000107, RGD:13792537 |
NCBI chr10:49,632,308...49,655,614
Ensembl chr10:49,632,378...49,655,614
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G |
Hsd17b10 |
hydroxysteroid (17-beta) dehydrogenase 10 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:29040705) |
UniProt Ensembl RGD |
PMID:29040705 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr X:21,089,152...21,091,597
Ensembl chr X:21,089,122...21,109,488
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G |
Trmt10c |
tRNA methyltransferase 10C, mitochondrial RNase P subunit |
involved_in |
ISO |
(PMID:29040705) |
RGD |
PMID:29040705 |
|
NCBI chr11:44,584,388...44,589,466
Ensembl chr11:44,584,113...44,589,568
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G |
Trnt1 |
tRNA nucleotidyl transferase 1 |
involved_in |
ISO IBA |
(PMID:11504732) PMID:21873635 |
RGD |
PMID:11504732 PMID:21873635 |
RGD:13792537 |
NCBI chr 4:139,681,115...139,703,611
Ensembl chr 4:139,680,858...139,703,611
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G |
Hsd17b10 |
hydroxysteroid (17-beta) dehydrogenase 10 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:24549042), (PMID:25925575), (PMID:28888424), (PMID:29040705), (PMID:29880640) |
UniProt Ensembl RGD |
PMID:24549042 PMID:25925575 PMID:28888424 PMID:29040705 PMID:29880640 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr X:21,089,152...21,091,597
Ensembl chr X:21,089,122...21,109,488
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G |
Prorp |
protein only RNase P catalytic subunit |
involved_in |
ISS IBA ISO |
GO_REF:0000024 PMID:21873635 (PMID:25953853), (PMID:29880640) |
UniProt RGD |
PMID:25953853 PMID:29880640 PMID:21873635 |
GO_REF:0000024, RGD:13792537 |
NCBI chr 6:72,669,659...72,762,419
Ensembl chr 6:72,670,847...72,762,416
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Trmt10c |
tRNA methyltransferase 10C, mitochondrial RNase P subunit |
involved_in |
ISS IBA ISO |
GO_REF:0000024 PMID:21873635 (PMID:29040705), (PMID:29880640) |
UniProt RGD |
PMID:29040705 PMID:29880640 PMID:21873635 |
GO_REF:0000024, RGD:13792537 |
NCBI chr11:44,584,388...44,589,466
Ensembl chr11:44,584,113...44,589,568
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Hsd17b10 |
hydroxysteroid (17-beta) dehydrogenase 10 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:23042678), (PMID:25925575), (PMID:28888424) |
UniProt Ensembl RGD |
PMID:23042678 PMID:25925575 PMID:28888424 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr X:21,089,152...21,091,597
Ensembl chr X:21,089,122...21,109,488
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Trmt10c |
tRNA methyltransferase 10C, mitochondrial RNase P subunit |
involved_in |
ISO |
(PMID:23042678) |
RGD |
PMID:23042678 |
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NCBI chr11:44,584,388...44,589,466
Ensembl chr11:44,584,113...44,589,568
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Trmt5 |
tRNA methyltransferase 5 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:26189817) |
RGD |
PMID:26189817 PMID:21873635 |
RGD:13792537 |
NCBI chr 6:91,963,558...91,987,660
Ensembl chr 6:91,943,724...91,987,555
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Cdk5rap1 |
CDK5 regulatory subunit associated protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:5750452 (MGI:5635958|PMID:25738458) |
RGD |
PMID:25738458 |
MGI:5635958 |
NCBI chr 3:142,838,081...142,872,669
Ensembl chr 3:142,708,028...142,872,677
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Mettl8 |
methyltransferase 8, methylcytidine |
involved_in |
ISO |
(PMID:34774131) |
RGD |
PMID:34774131 |
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NCBI chr 3:55,731,453...55,863,652
Ensembl chr 3:55,770,167...55,863,676
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Trit1 |
tRNA isopentenyltransferase 1 |
involved_in |
ISO |
(PMID:34774131) (PMID:24901367) |
RGD |
PMID:24901367 PMID:34774131 |
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NCBI chr 5:135,293,472...135,341,522
Ensembl chr 5:135,295,330...135,338,764
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Trmt10c |
tRNA methyltransferase 10C, mitochondrial RNase P subunit |
involved_in |
ISO ISS |
(PMID:27132592) GO_REF:0000024 |
RGD UniProt |
PMID:27132592 |
GO_REF:0000024 |
NCBI chr11:44,584,388...44,589,466
Ensembl chr11:44,584,113...44,589,568
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Rpusd4 |
RNA pseudouridine synthase D4 |
involved_in |
ISO |
(PMID:28082677) |
RGD |
PMID:28082677 |
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NCBI chr 8:33,617,384...33,626,873
Ensembl chr 8:33,617,379...33,626,873
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Mto1 |
mitochondrial tRNA translation optimization 1 |
acts_upstream_of_or_within involved_in |
ISO IBA |
SGD:S000003205 (MGI:2677576|PMID:14522080) PMID:21873635 |
RGD |
PMID:14522080 PMID:21873635 |
MGI:2677576, RGD:13792537 |
NCBI chr 8:79,309,681...79,335,231
Ensembl chr 8:79,309,982...79,335,231
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Ddx56 |
DEAD-box helicase 56 |
acts_upstream_of_negative_effect |
ISO |
(PMID:33109765) |
RGD |
PMID:33109765 |
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NCBI chr14:81,112,008...81,122,395
Ensembl chr14:81,112,012...81,122,333
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Fbxl2 |
F-box and leucine-rich repeat protein 2 |
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
NCBI chr 8:113,916,660...113,965,137
Ensembl chr 8:113,913,373...113,965,066
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Fmr1 |
fragile X messenger ribonucleoprotein 1 |
involved_in |
ISO |
(PMID:24514761) |
RGD |
PMID:24514761 |
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NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
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Phb1 |
prohibitin 1 |
involved_in |
ISO |
(MGI:6436975|PMID:29324904) |
RGD |
PMID:29324904 |
MGI:6436975 |
NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042
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G |
Samhd1 |
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 |
involved_in |
ISO |
(PMID:25106914) |
RGD |
PMID:25106914 |
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NCBI chr 3:145,761,549...145,794,420
Ensembl chr 3:145,761,558...145,794,386
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Tmem41b |
transmembrane protein 41B |
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
NCBI chr 1:164,012,585...164,026,967
Ensembl chr 1:164,012,592...164,026,933
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Vapb |
VAMP associated protein B and C |
involved_in |
ISO |
(PMID:19515777) |
RGD |
PMID:19515777 |
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NCBI chr 3:162,536,090...162,578,738
Ensembl chr 3:162,535,905...162,573,763
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Cpsf3 |
cleavage and polyadenylation specific factor 3 |
involved_in |
ISO |
(PMID:30507380) |
RGD |
PMID:30507380 |
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NCBI chr 6:40,836,121...40,864,129
Ensembl chr 6:40,836,097...40,864,128
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G |
Cpsf6 |
cleavage and polyadenylation specific factor 6 |
involved_in |
ISO |
(PMID:20695905) |
RGD |
PMID:20695905 |
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NCBI chr 7:52,956,589...53,001,783
Ensembl chr 7:52,956,589...52,988,122
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G |
Cpsf7 |
cleavage and polyadenylation specific factor 7 |
involved_in |
ISO |
(PMID:20695905) |
RGD |
PMID:20695905 |
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NCBI chr 1:207,167,690...207,191,865
Ensembl chr 1:207,167,859...207,191,905
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G |
Cstf1 |
cleavage stimulation factor subunit 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 3:161,144,533...161,156,294
Ensembl chr 3:161,144,548...161,156,300
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G |
Cstf2 |
cleavage stimulation factor subunit 2 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr X:97,253,559...97,279,476
Ensembl chr X:97,253,586...97,279,476
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G |
Cstf2t |
cleavage stimulation factor subunit 2, tau variant |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 1:228,952,617...228,956,183
Ensembl chr 1:228,952,504...228,955,873
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G |
Cstf3 |
cleavage stimulation factor subunit 3 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 3:90,966,415...91,037,669
Ensembl chr 3:90,966,354...91,042,196
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Mblac1 |
metallo-beta-lactamase domain containing 1 |
involved_in |
ISO |
(PMID:30507380) |
RGD |
PMID:30507380 |
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NCBI chr12:17,071,465...17,072,736
Ensembl chr12:17,071,465...17,072,735
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G |
Nudt21 |
nudix hydrolase 21 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:15937220), (PMID:20695905) |
UniProt RGD |
PMID:15937220 PMID:20695905 |
GO_REF:0000024 |
NCBI chr19:10,974,800...10,993,841
Ensembl chr19:10,974,241...10,991,682
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G |
Rprd1a |
regulation of nuclear pre-mRNA domain containing 1A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr18:15,791,418...15,839,338
Ensembl chr18:15,791,418...15,839,338
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G |
Rprd1b |
regulation of nuclear pre-mRNA domain containing 1B |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:146,682,975...146,729,251
Ensembl chr 3:146,682,922...146,786,452
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G |
Rprd2 |
regulation of nuclear pre-mRNA domain containing 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:183,311,132...183,367,959
Ensembl chr 2:183,293,114...183,367,407
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G |
Zc3h3 |
zinc finger CCCH type containing 3 |
acts_upstream_of_or_within |
ISO |
(MGI:3619747|PMID:16115198) |
RGD |
PMID:16115198 |
MGI:3619747 |
NCBI chr 7:107,440,694...107,525,451
Ensembl chr 7:107,440,694...107,525,451
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G |
Cpsf2 |
cleavage and polyadenylation specific factor 2 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:18688255) |
RGD |
PMID:18688255 PMID:21873635 |
RGD:13792537 |
NCBI chr 6:121,123,941...121,152,756
Ensembl chr 6:121,120,569...121,151,921
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G |
Cpsf3 |
cleavage and polyadenylation specific factor 3 |
involved_in |
ISO IBA |
(PMID:18688255) (MGI:4418605|PMID:18955505) PMID:21873635 |
RGD |
PMID:18688255 PMID:18955505 PMID:21873635 |
MGI:4418605, RGD:13792537 |
NCBI chr 6:40,836,121...40,864,129
Ensembl chr 6:40,836,097...40,864,128
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G |
LOC100363294 |
stem-loop binding protein-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr18:26,356,478...26,363,577
Ensembl chr18:26,356,474...26,363,577
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G |
Lsm10 |
LSM10, U7 small nuclear RNA associated |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:138,365,983...138,375,856
Ensembl chr 5:138,373,119...138,377,505
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G |
Lsm11 |
LSM11, U7 small nuclear RNA associated |
involved_in |
ISO IBA |
(MGI:2676509|PMID:12975319) PMID:21873635 (PMID:33230297) |
RGD |
PMID:12975319 PMID:33230297 PMID:21873635 |
MGI:2676509, RGD:13792537 |
NCBI chr10:30,367,841...30,385,956
Ensembl chr10:30,370,727...30,385,944
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G |
Slbp |
stem-loop binding protein |
involved_in |
IBA ISO |
PMID:21873635 (MGI:4353869|PMID:19470752) |
RGD |
PMID:19470752 PMID:21873635 |
MGI:4353869, RGD:13792537 |
NCBI chr14:77,071,441...77,081,911
Ensembl chr14:77,071,632...77,081,906
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Zfp473 |
zinc finger protein 473 |
involved_in |
ISO |
(PMID:16714279) |
RGD |
PMID:16714279 |
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NCBI chr 1:95,222,683...95,243,328
Ensembl chr 1:95,223,433...95,243,325
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G |
Isy1 |
ISY1 splicing factor homolog |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:120,276,535...120,297,227
Ensembl chr 4:120,276,292...120,297,188
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G |
Slu7 |
SLU7 homolog, splicing factor |
involved_in |
ISO ISS |
(PMID:15728250) PMID:15181151 |
RGD |
PMID:15728250 PMID:15181151 |
RGD:1304333 |
NCBI chr10:27,908,325...27,923,784
Ensembl chr10:27,908,396...27,923,349
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G |
ENSRNOG00000066758 |
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involved_in |
IEA |
GO_REF:0000104 |
UniProt |
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GO_REF:0000104 |
Ensembl chr X:14,995,412...14,996,454
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G |
ENSRNOG00000069556 |
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involved_in |
IEA |
GO_REF:0000104 |
UniProt |
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GO_REF:0000104 |
Ensembl chr X:135,677,760...135,678,704
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G |
Prpf39 |
pre-mRNA processing factor 39 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 6:83,088,981...83,113,826
Ensembl chr 6:83,088,986...83,113,825
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G |
Psip1 |
PC4 and SRSF1 interacting protein 1 |
involved_in |
ISO IEA ISS |
(PMID:9885563) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:9885563 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 5:97,847,010...97,879,280
Ensembl chr 5:97,847,015...97,879,257
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G |
Sfswap |
splicing factor SWAP |
involved_in acts_upstream_of_or_within |
IEA ISO IBA |
GO_REF:0000107 (MGI:84585|PMID:8940107) PMID:21873635 |
Ensembl RGD |
PMID:8940107 PMID:21873635 |
GO_REF:0000107 MGI:84585, RGD:13792537 |
NCBI chr12:27,109,607...27,179,941
Ensembl chr12:27,109,611...27,179,884
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Snrpc |
small nuclear ribonucleoprotein polypeptide C |
involved_in |
IBA IEA |
PMID:21873635 GO_REF:0000104 |
UniProt |
PMID:21873635 |
GO_REF:0000104, RGD:13792537 |
NCBI chr20:5,888,453...5,906,638
Ensembl chr20:5,888,453...5,906,638
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G |
Snrpc-ps3 |
small nuclear ribonucleoprotein polypeptide C, pseudogene 3 |
involved_in |
IEA |
GO_REF:0000104 |
UniProt |
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GO_REF:0000104 |
NCBI chr10:14,191,681...14,192,406
Ensembl chr10:14,191,662...14,192,401
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G |
Srsf1 |
serine and arginine rich splicing factor 1 |
involved_in |
ISO |
(PMID:8940107), (PMID:9885563) |
RGD |
PMID:8940107 PMID:9885563 |
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NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336
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Srsf12 |
serine and arginine rich splicing factor 12 |
involved_in |
ISO |
(PMID:11684676) |
RGD |
PMID:11684676 |
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NCBI chr 5:47,606,526...47,631,509
Ensembl chr 5:47,606,285...47,629,778
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G |
Cpsf6 |
cleavage and polyadenylation specific factor 6 |
involved_in |
ISO IBA |
(PMID:20695905), (PMID:23187700), (PMID:29276085) PMID:21873635 |
RGD |
PMID:20695905 PMID:23187700 PMID:29276085 PMID:21873635 |
RGD:13792537 |
NCBI chr 7:52,956,589...53,001,783
Ensembl chr 7:52,956,589...52,988,122
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G |
Cpsf7 |
cleavage and polyadenylation specific factor 7 |
involved_in |
ISS ISO IEA IBA |
GO_REF:0000024 (PMID:20695905), (PMID:29276085) GO_REF:0000107 PMID:21873635 |
UniProt RGD Ensembl |
PMID:20695905 PMID:29276085 PMID:21873635 |
GO_REF:0000024 GO_REF:0000107, RGD:13792537 |
NCBI chr 1:207,167,690...207,191,865
Ensembl chr 1:207,167,859...207,191,905
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G |
Nudt21 |
nudix hydrolase 21 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:17098938), (PMID:20695905), (PMID:23187700), (PMID:29276085) |
UniProt RGD |
PMID:17098938 PMID:20695905 PMID:23187700 PMID:29276085 |
GO_REF:0000024 |
NCBI chr19:10,974,800...10,993,841
Ensembl chr19:10,974,241...10,991,682
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G |
Rbfox2 |
RNA binding fox-1 homolog 2 |
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IMP |
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RGD |
PMID:34731606 |
RGD:329845875 |
NCBI chr 7:108,810,627...109,054,420
Ensembl chr 7:108,810,628...109,054,691
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G |
Virma |
vir like m6A methyltransferase associated |
involved_in |
ISO |
(PMID:29507755) |
RGD |
PMID:29507755 |
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NCBI chr 5:24,961,208...25,024,660
Ensembl chr 5:24,960,778...25,023,341
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G |
Ythdc1 |
YTH N6-methyladenosine RNA binding protein C1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:6161521|PMID:29799838) GO_REF:0000107 |
RGD Ensembl |
PMID:29799838 |
GO_REF:0000107 MGI:6161521 |
NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
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G |
AC118772.1 |
|
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr10:68,067,119...68,089,948
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G |
Ago3 |
argonaute RISC catalytic component 3 |
involved_in |
ISO |
(PMID:18771919) |
RGD |
PMID:18771919 |
|
NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
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G |
Ago4 |
argonaute RISC component 4 |
involved_in |
ISO |
(PMID:18771919) |
RGD |
PMID:18771919 |
|
NCBI chr 5:138,780,450...138,825,889
Ensembl chr 5:138,783,069...138,825,632
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G |
Cnot10 |
CCR4-NOT transcription complex, subunit 10 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 8:114,280,486...114,330,110
Ensembl chr 8:114,280,490...114,330,107
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G |
Cnot9 |
CCR4-NOT transcription complex subunit 9 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 9:76,084,269...76,109,111
Ensembl chr 9:76,084,334...76,109,100
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G |
Dcp2 |
decapping mRNA 2 |
involved_in |
ISO |
(PMID:21070968), (PMID:28002401) (MGI:4849882|PMID:21070968) |
RGD |
PMID:21070968 PMID:28002401 |
MGI:4849882 |
NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557
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G |
Dis3l2 |
DIS3-like 3'-5' exoribonuclease 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 9:87,355,409...87,736,616
Ensembl chr 9:87,356,457...87,736,616
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G |
Dxo |
decapping exoribonuclease |
involved_in |
ISO ISS |
(PMID:29601584) (MGI:5488528|PMID:23523372), (MGI:6368104|PMID:28283058) GO_REF:0000024 |
RGD UniProt |
PMID:23523372 PMID:28283058 PMID:29601584 |
GO_REF:0000024 MGI:5488528 MGI:6368104 |
NCBI chr20:3,993,322...3,995,484
Ensembl chr20:3,993,327...3,995,494
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G |
Hspa1a |
heat shock protein family A (Hsp70) member 1A |
involved_in |
ISO ISS |
(PMID:10205060) GO_REF:0000024 |
RGD UniProt |
PMID:10205060 |
GO_REF:0000024 |
NCBI chr20:3,855,104...3,859,148
Ensembl chr20:3,856,006...3,873,240
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G |
Hspa1b |
heat shock protein family A (Hsp70) member 1B |
involved_in |
ISO ISS |
(PMID:10205060) GO_REF:0000024 |
RGD UniProt |
PMID:10205060 |
GO_REF:0000024 |
NCBI chr20:3,870,765...3,873,221
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G |
Khsrp |
KH-type splicing regulatory protein |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:5439239|PMID:22844247) |
Ensembl RGD |
PMID:22844247 |
GO_REF:0000107 MGI:5439239 |
NCBI chr 9:1,862,555...1,872,301
Ensembl chr 9:1,862,899...1,872,451
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G |
Lsm2 |
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated |
acts_upstream_of_or_within |
ISO |
(PMID:12515382) |
RGD |
PMID:12515382 |
|
NCBI chr20:3,843,467...3,847,217
Ensembl chr20:3,843,466...3,847,266
|
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G |
Lsm5 |
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated |
acts_upstream_of_or_within |
ISO |
(PMID:12515382) |
RGD |
PMID:12515382 |
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NCBI chr 4:85,951,073...85,954,289
Ensembl chr 6:104,652,477...104,654,165 Ensembl chr 4:104,652,477...104,654,165
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Lsm6 |
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated |
acts_upstream_of_or_within |
ISO |
(PMID:12515382) |
RGD |
PMID:12515382 |
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NCBI chr19:29,098,254...29,112,858
Ensembl chr13:42,114,032...42,116,484 Ensembl chr19:42,114,032...42,116,484
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G |
Mettl14 |
methyltransferase 14, N6-adenosine-methyltransferase subunit |
involved_in |
ISO |
(MGI:5927282|PMID:28965759) |
RGD |
PMID:28965759 |
MGI:5927282 |
NCBI chr 2:211,530,598...211,546,858
Ensembl chr 2:211,530,602...211,546,821
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Mettl16 |
methyltransferase 16, N6-methyladenosine |
involved_in |
ISO |
(MGI:6114846|PMID:29262316) |
RGD |
PMID:29262316 |
MGI:6114846 |
NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061
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Mettl3 |
methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit |
involved_in |
ISO |
(MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) |
RGD |
PMID:28637692 PMID:28792938 PMID:28965759 |
MGI:5927282 MGI:6094929 MGI:6095345 |
NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041
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Mir144 |
microRNA 144 |
involved_in |
ISO |
MGI:3619412|MGI:5562734 (MGI:6442632|PMID:30971389) |
RGD |
PMID:30971389 |
MGI:6442632 |
NCBI chr10:62,961,348...62,961,430
Ensembl chr10:62,961,348...62,961,430
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Mir451a |
microRNA 451a |
involved_in |
ISO |
MGI:2676829|MGI:5562734 (MGI:6442632|PMID:30971389) |
RGD |
PMID:30971389 |
MGI:6442632 |
NCBI chr10:62,961,520...62,961,591
Ensembl chr10:62,961,520...62,961,591
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Mirlet7b |
microRNA let-7b |
acts_upstream_of_or_within |
ISO |
MGI:2676795|MGI:3619050 (MGI:5439239|PMID:22844247) |
RGD |
PMID:22844247 |
MGI:5439239 |
NCBI chr 7:116,804,186...116,804,270
Ensembl chr 7:116,804,186...116,804,270
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Mirlet7c1 |
microRNA let-7c-1 |
acts_upstream_of_or_within |
ISO |
MGI:2676794|MGI:3619050 (MGI:5439239|PMID:22844247) |
RGD |
PMID:22844247 |
MGI:5439239 |
NCBI chr11:16,201,163...16,201,256
Ensembl chr11:16,201,158...16,201,265
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Mirlet7c2 |
microRNA let7c-2 |
acts_upstream_of_or_within |
ISO |
MGI:2676794|MGI:2676795 (MGI:5439239|PMID:22844247) |
RGD |
PMID:22844247 |
MGI:5439239 |
NCBI chr 7:116,803,771...116,803,865
Ensembl chr 7:116,803,771...116,803,865
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Nanos2 |
nanos C2HC-type zinc finger 2 |
involved_in |
ISO |
(MGI:4431145|PMID:20133598) |
RGD |
PMID:20133598 |
MGI:4431145 |
NCBI chr 1:78,635,668...78,637,128
Ensembl chr 1:78,635,668...78,637,128
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G |
Nudt12 |
nudix hydrolase 12 |
involved_in |
ISO |
(MGI:6368680|PMID:31101919) |
RGD |
PMID:31101919 |
MGI:6368680 |
NCBI chr 9:98,741,627...98,755,039
Ensembl chr 9:98,742,360...98,755,039
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Nudt16 |
nudix hydrolase 16 |
involved_in |
IBA ISO |
PMID:21873635 (MGI:4849882|PMID:21070968) (PMID:21070968), (PMID:21337011) |
RGD |
PMID:21070968 PMID:21337011 PMID:21873635 |
MGI:4849882, RGD:13792537 |
NCBI chr 8:105,739,927...105,741,982
Ensembl chr 8:105,739,623...105,741,998
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Nudt16l1 |
nudix hydrolase 16 like 1 |
NOT|involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:10,636,174...10,638,090
Ensembl chr10:10,636,174...10,688,370
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Nudt16l2 |
nudix hydrolase 16 like 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 8:105,754,821...105,756,548
Ensembl chr 8:105,754,844...105,756,518
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Pnpt1 |
polyribonucleotide nucleotidyltransferase 1 |
involved_in |
ISO |
(PMID:12721301), (PMID:16055741) |
RGD |
PMID:12721301 PMID:16055741 |
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NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696
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G |
Rida |
reactive intermediate imine deaminase A homolog |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:30930054) |
UniProt Ensembl RGD |
PMID:30930054 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 7:65,691,429...65,705,257
Ensembl chr 7:65,691,435...65,705,716
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Slfn14 |
schlafen family member 14 |
involved_in |
ISO |
(PMID:25996083) (MGI:5705207|PMID:25996083) |
RGD |
PMID:25996083 |
MGI:5705207 |
NCBI chr10:68,076,326...68,087,794
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Snd1 |
staphylococcal nuclease and tudor domain containing 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:57,095,205...57,494,501
Ensembl chr 4:57,095,208...57,530,843
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G |
Ythdf2 |
YTH N6-methyladenosine RNA binding protein F2 |
involved_in |
ISO |
(PMID:27558897), (PMID:30559377), (PMID:30930054) (MGI:6316439|PMID:29855337), (MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673) |
RGD |
PMID:27558897 PMID:29855337 PMID:30065315 PMID:30150673 PMID:30559377 PMID:30930054 More...
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MGI:6316439 MGI:6316688 MGI:6317061 |
NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144
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Zc3h12a |
zinc finger CCCH type containing 12A |
involved_in |
ISO |
(MGI:5706859|PMID:26000482) |
RGD |
PMID:26000482 |
MGI:5706859 |
NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
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Zc3h12d |
zinc finger CCCH type containing 12D |
acts_upstream_of_or_within |
ISO |
MGI:5588370 (MGI:5567042|PMID:24415781) |
RGD |
PMID:24415781 |
MGI:5567042 |
NCBI chr 1:2,313,110...2,348,820
Ensembl chr 1:2,314,324...2,348,819
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Zfp36 |
zinc finger protein 36 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 (PMID:10751406), (PMID:11782475) (PMID:10330172), (PMID:20221403) |
UniProt RGD |
PMID:10330172 PMID:10751406 PMID:11782475 PMID:20221403 |
GO_REF:0000024 |
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
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Zfp36l1 |
zinc finger protein 36, C3H type-like 1 |
acts_upstream_of_or_within |
IDA |
PMID:10751406 |
MGI |
PMID:10751406 |
RGD:1580602 |
NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
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G |
Zfp36l2 |
zinc finger protein 36, C3H type-like 2 |
involved_in |
ISO |
(MGI:5320815|PMID:22367205) (PMID:34611029) |
RGD |
PMID:22367205 PMID:34611029 |
MGI:5320815 |
NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064
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Zhx2 |
zinc fingers and homeoboxes 2 |
acts_upstream_of_or_within |
ISO |
(MGI:49288|PMID:1370712) |
RGD |
PMID:1370712 |
MGI:49288 |
NCBI chr 7:89,226,358...89,374,266
Ensembl chr 7:89,226,463...89,374,378
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G |
AABR07008904.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
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C3h9orf78 |
similar to human chromosome 9 open reading frame 78 |
involved_in |
ISO |
(PMID:35241646) |
RGD |
PMID:35241646 |
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NCBI chr 3:14,264,263...14,272,580
Ensembl chr 3:14,264,083...14,272,764
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Cactin |
cactin, spliceosome C complex subunit |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:8,391,396...8,397,219
Ensembl chr 7:8,391,397...8,396,829
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Clns1a |
chloride nucleotide-sensitive channel 1A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:152,019,369...152,039,670
Ensembl chr 1:152,019,378...152,039,661
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G |
Cwc15 |
CWC15 spliceosome-associated protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 8:11,305,401...11,316,326
Ensembl chr 8:11,305,424...11,316,325
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Cwc15-ps3 |
CWC15 spliceosome-associated protein, pseudogene 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:76,016,636...76,017,401
Ensembl chr 2:76,016,684...76,017,358
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G |
Dcps |
decapping enzyme, scavenger |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:18426921) |
UniProt RGD |
PMID:18426921 |
GO_REF:0000024 |
NCBI chr 8:33,468,669...33,524,407
Ensembl chr 8:33,415,671...33,524,389
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G |
Ncbp2 |
nuclear cap binding protein subunit 2 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 GO_REF:0000002 (PMID:18426921) |
UniProt Ensembl InterPro RGD |
PMID:18426921 |
GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 |
NCBI chr11:68,821,026...68,829,863
Ensembl chr11:68,817,740...68,851,885
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G |
Prpf40a |
pre-mRNA processing factor 40 homolog A |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 3:37,625,585...37,689,859
Ensembl chr 3:37,627,690...37,690,886
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G |
Prpf40b |
pre-mRNA processing factor 40 homolog B |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 7:130,392,611...130,454,053
Ensembl chr 7:130,432,112...130,454,052
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G |
Prpf4b |
pre-mRNA processing factor 4B |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr17:29,985,343...30,020,285
Ensembl chr17:29,985,343...30,019,625
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